View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3013_high_37 (Length: 204)
Name: NF3013_high_37
Description: NF3013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3013_high_37 |
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Alignment Details
Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 37097531 - 37097717
Alignment:
| Q |
1 |
ctccaccaatcaagtagttgttgtcgagcttcctttggtaactttccattctttttcttcttcaaaaactctttcttaaggcttcctagatatccactat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37097531 |
ctccaccaatcaagtagttgttgtcgagcttcctttggtaactttccattctttttcttcttcaaaaactctttcttaaggcttcctagatatccactat |
37097630 |
T |
|
| Q |
101 |
acttgcgtaaaagctgcacttttaattcctgatcttcaccttgagttgtatctaggttgttttcatgcacatcgatctcattctgtg |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37097631 |
acttgcgtaaaagctgcacttttaattcctgatcttcaccttgagttgtatctaggttgttttcatgcacatcgatctcattctgtg |
37097717 |
T |
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