View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3014_low_2 (Length: 458)
Name: NF3014_low_2
Description: NF3014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3014_low_2 |
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Alignment Details
Target: chr6 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 19 - 379
Target Start/End: Complemental strand, 22704185 - 22703825
Alignment:
| Q |
19 |
aagattgacaaggttagcccttttattgaagttgaaactagttactaaacttggttagattgtataactagttaccaaagttggttagattataaaatga |
118 |
Q |
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| T |
22704185 |
aagattgacaaggttagcccttttattgaagttgaaactagttactaaacttggttagattgtataactagttaccaaagttggttagattataaaatga |
22704086 |
T |
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| Q |
119 |
cttttacaagtactttaagatatcatgagatataagtgttatcttcaagatatttcacgagtaataaaatgattattcttaatgtggttttttctatttc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22704085 |
cttttacaagtactttaagatatcatgagatataagtgttatcttcaagatatttcacgagtaataaaatgattattcttaatgtggttttttctatttc |
22703986 |
T |
|
| Q |
219 |
catgttagaatgtgaggttttaataccatattccgcacatctattgagaatctgagaaatacgtactgttttttaagcatattgtagtcactacttcacc |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22703985 |
catgttagaatgtgaggttttaataccatattccgcacatctattgagaatctgagaaatacgtactgttttttaagcatattgtagtcactacttcacc |
22703886 |
T |
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| Q |
319 |
atttcatgtatgaccctgcagcgtgtgttctgcagtattagttataattttaaggtcattc |
379 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22703885 |
atttcatgtatggccctgcagcgtgtgttctgcagtattagttataattttaaggtcattc |
22703825 |
T |
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