View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3017_low_14 (Length: 292)
Name: NF3017_low_14
Description: NF3017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3017_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 7837347 - 7837623
Alignment:
| Q |
1 |
aagaaggtaccccacaatacttcaaatgtgctgcttgtgattgtcaccgtaatttccatcgaaaacatgtccaacaacaacatagtattcctcaacaaca |
100 |
Q |
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| T |
7837347 |
aagaaggtaccccacaatacttcaaatgtgctgcttgtgattgtcaccgtaatttccatcgaaaacatgtccaacaacaacatagtattcctcaacaaca |
7837446 |
T |
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| Q |
101 |
ttttcagcatgttcctaattatcatcatagcaacaacaacggtcaccttaatcttccaacaccatcttcttcatctcaaagaatttcacaacctagttct |
200 |
Q |
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| T |
7837447 |
tgttcagcatgttcctaattatcatcatagcaacaacaacggtcaccttaatcttccaacaccatcttcttcatctcaaagagtttcacaacctagttct |
7837546 |
T |
|
| Q |
201 |
ggacaagttccaccgtccatgatgatgacttttggatcagttccagctgaatcatcaagtgaagatctcaatatgtt |
277 |
Q |
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| T |
7837547 |
ggacaagttccaccgtccatgatgatgacttttggatcagttccagctgaatcatcaagtgaagatctcaatatgtt |
7837623 |
T |
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