View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3017_low_2 (Length: 456)
Name: NF3017_low_2
Description: NF3017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3017_low_2 |
 |  |
|
| [»] scaffold0010 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 318; Significance: 1e-179; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 11 - 419
Target Start/End: Complemental strand, 12158849 - 12158447
Alignment:
| Q |
11 |
aatattaaataattcaacgtggtaatgatttcctattgtgaaagattcaatattacctccacgttttgattttatgcaaaagaatgtatcatccatgttt |
110 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||| |||||| |||||| |
|
|
| T |
12158849 |
aatataaaataattcaacgtggtaatgatttcctattgtgaaagattcaatattacctccccattttgattttacgcaaaagaatatatcatatatgttt |
12158750 |
T |
 |
| Q |
111 |
ggaatgttaatgtcatgcttattgcaaaataaaattatctcctccaataaaggttctcattcatcatctcttagagtttataatcggccatttgtgatgt |
210 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||| |
|
|
| T |
12158749 |
g------taatgtcatgcttattgcaaaataaaattatctcctccaataaaggttctcattcatcatctcttagagtttgtaattgctcatttgtgatgt |
12158656 |
T |
 |
| Q |
211 |
taatcaagttcataggattgacgatgtcttgatctttcctttgcaaagcttgtggcaattcatttgacatacctaagacctttttcatcaaatgcaatgt |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
12158655 |
taatcaagttcatagcattgacgatgtcttgatcttttctttgcaaagcttgtgacaattcatttaacatacctaagacctttttcatcaaatgcaatgt |
12158556 |
T |
 |
| Q |
311 |
gggtgcgaaatcaaaattattcattagaattaaaagattgtttgcttctcctcttccatcattaactggtttatcatctttcaacatttcaagaacatca |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
12158555 |
gggtgcgaaatcaaaattattcattagaattaaaagatcgtttgcttctcctcttccatcattaactggtttatcatctttcaacatttcaagaacatta |
12158456 |
T |
 |
| Q |
411 |
gttacaaaa |
419 |
Q |
| |
|
||||||||| |
|
|
| T |
12158455 |
gttacaaaa |
12158447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 43 - 416
Target Start/End: Original strand, 30866614 - 30866980
Alignment:
| Q |
43 |
ctattgtgaaagattcaatattacctccacgttttgattttatgcaaaagaatgtatcatccatgtttggaatgttaatgtcatgcttattgcaaaataa |
142 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||| | | ||| || ||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
30866614 |
ctattgtgatagattcaacattacctccacgttttgattgtccacggaagtatatatcatccatgcttggaatgctaatgtcatgcttattgcaaaataa |
30866713 |
T |
 |
| Q |
143 |
aattatctcctccaataaaggttctcattcatcatctcttagagtttataatcggccatttgtgatgttaatcaagttcataggattgacgatgtcttga |
242 |
Q |
| |
|
| ||| ||||||||||||| |||| ||| |||| |||||| ||| | ||||| ||||||| ||||||||||| |||||| ||||||||| |
|
|
| T |
30866714 |
agttacctcctccaataaatgttcccatctatca-------gagtttgtaacaactcttttgtaatgttaaccaagttcatagcattgacaatgtcttga |
30866806 |
T |
 |
| Q |
243 |
tctttcctttgcaaagcttgtggcaattcatttgacatacctaagacctttttcatcaaatgcaatgtgggtgcgaaatcaaaattattcattagaatta |
342 |
Q |
| |
|
||||| || | ||| | |||| ||| | |||||| ||||| ||||| |||||||||||||| |||||| ||| ||||||||||||||||||| || || |
|
|
| T |
30866807 |
tcttttctctacaatgattgtcacaaataatttgaaatacccaagacttttttcatcaaatgtaatgtgattgcaaaatcaaaattattcattaaaagta |
30866906 |
T |
 |
| Q |
343 |
aaagattgtttgcttctcctcttccatcattaactggtttatcatctttcaacatttcaagaacatcagttaca |
416 |
Q |
| |
|
||||| |||||||| |||||||||| |||||| ||||||||||||||| | |||||||||| ||||| |
|
|
| T |
30866907 |
aaagaccatttgcttcacctcttccatatttaactaaaacatcatctttcaacatattaagaacatcaattaca |
30866980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 17 - 414
Target Start/End: Complemental strand, 4815783 - 4815385
Alignment:
| Q |
17 |
aaataattcaacgtggtaa-tgatttcctattgtgaaagattcaatattacctccacgttttgattttatgcaaaagaatgtatcatccatgtttggaat |
115 |
Q |
| |
|
||||||||||| | ||||| ||||| |||||||||| ||||||| |||||||||||||||||| ||| | |||||| ||||||||||| ||||||| |
|
|
| T |
4815783 |
aaataattcaatgcggtaaatgattccctattgtgatagattcagcattacctccacgttttgactttccacggaagaatatatcatccatgcttggaat |
4815684 |
T |
 |
| Q |
116 |
gttaatgtcatgcttattgcaaaataaaattatctcctccaataaaggttctcattcatcatctcttagagtttataatcggccatttgtgatgttaatc |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| || |||||| | ||| ||||| |||| |
|
|
| T |
4815683 |
gttaatgtcatgcttattgcaaaataaaattacctcctccaataaaggttcccatccatcatctcttagagcttgtaatcgctcctttttgatgctaatt |
4815584 |
T |
 |
| Q |
216 |
aagttcataggattgacgatgtcttgatctttcctttgcaaagcttgtggcaattcatttgacatacctaagacctttttcatcaaatgcaatgtgggtg |
315 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||| |||||||||||||||||||||| ||| |
|
|
| T |
4815583 |
aggttcatagcattgacgatgtcttgatctttcctttgcaatgcttgtgacaattcatttgaaaaacctaagatctttttcatcaaatgcaatgtgagtg |
4815484 |
T |
 |
| Q |
316 |
cgaaatcaaaattattcattagaattaaaagattgtttgcttctcctcttccatcattaactggtttatcatctttcaacatttcaagaacatcagtta |
414 |
Q |
| |
|
| ||||||||| ||||||| |||||||||||| | |||||||| ||||||||||| |||| || | ||||||| |||||||||||||||||||||||| |
|
|
| T |
4815483 |
caaaatcaaaagtattcatgagaattaaaagactttttgcttcacctcttccatctttaattgatacatcatctctcaacatttcaagaacatcagtta |
4815385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 11 - 416
Target Start/End: Complemental strand, 23600024 - 23599619
Alignment:
| Q |
11 |
aatattaaataattcaacgtggtaatgatttcctattgtgaaagattcaatattacctccacgttttgattttatgcaaaagaatgtatcatccatgttt |
110 |
Q |
| |
|
||||| ||||||||||| | ||||||||| ||||||||| |||||||| |||||||||| ||||||||| | | |||| || ||||| |||||||| |
|
|
| T |
23600024 |
aatataaaataattcaatgccgtaatgattctctattgtgatagattcaacattacctccatgttttgattgtccacgaaagtatatatcacccatgttt |
23599925 |
T |
 |
| Q |
111 |
ggaatgttaatgtcatgcttattgcaaaataaaattatctcctccaataaaggttctcattcatcatctcttagagtttataatcggccatttgtgatgt |
210 |
Q |
| |
|
|||||| |||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||| ||| | ||||| |||| |
|
|
| T |
23599924 |
ggaatgccaatgccatgcttattgcaaaataaatttacctcatccaataaaggttctcattcatcatctcttagagtttgtaacaactcttttgtaatgt |
23599825 |
T |
 |
| Q |
211 |
taatcaagttcataggattgacgatgtcttgatctttcctttgcaaagcttgtggcaattcatttgacatacctaagacctttttcatcaaatgcaatgt |
310 |
Q |
| |
|
||| ||| ||||||| ||||||||||||||||| ||| | ||||| | ||||| ||| | |||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
23599824 |
taaccaaattcatagcattgacgatgtcttgattttttatctgcaatgtttgtgacaaattatttgaaatacccaagacttttttcatcaaatgcaatgt |
23599725 |
T |
 |
| Q |
311 |
gggtgcgaaatcaaaattattcattagaattaaaagattgtttgcttctcctcttccatcattaactggtttatcatctttcaacatttcaagaacatca |
410 |
Q |
| |
|
| ||| ||||||||||||||||||| || ||||||| ||| |||| ||||||||||| || |||| ||||||||||||||| | |||||||||| |
|
|
| T |
23599724 |
gattgcaaaatcaaaattattcattaaaagtaaaagaccattttcttcacctcttccatctttgactgtaacatcatctttcaacatattaagaacatca |
23599625 |
T |
 |
| Q |
411 |
gttaca |
416 |
Q |
| |
|
||||| |
|
|
| T |
23599624 |
attaca |
23599619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 137 - 366
Target Start/End: Complemental strand, 13392804 - 13392575
Alignment:
| Q |
137 |
aaataaaattatctcctccaataaaggttctcattcatcatctcttagagtttataatcggccatttgtgatgttaatcaagttcataggattgacgatg |
236 |
Q |
| |
|
||||||||||| ||| ||||||||| ||||||| ||||||||||| |||||| |||| | ||||||||||||| |||||||||| |||||||||| |
|
|
| T |
13392804 |
aaataaaattacctcttccaataaacattctcatccatcatctctttgagtttgtaattgcttctttgtgatgttaaccaagttcataacattgacgatg |
13392705 |
T |
 |
| Q |
237 |
tcttgatctttcctttgcaaagcttgtggcaattcatttgacatacctaagacctttttcatcaaatgcaatgtgggtgcgaaatcaaaattattcatta |
336 |
Q |
| |
|
|||| ||||||||||| ||| | ||||| ||||| |||||| ||||| ||||| |||||||||||||| ||| || |||| ||||||||| ||||||||| |
|
|
| T |
13392704 |
tcttaatctttccttttcaatgattgtgacaatttatttgaaataccaaagacttttttcatcaaatgtaatatgagtgcaaaatcaaaagtattcatta |
13392605 |
T |
 |
| Q |
337 |
gaattaaaagattgtttgcttctcctcttc |
366 |
Q |
| |
|
||||||||||| | ||||||| ||||||| |
|
|
| T |
13392604 |
gaattaaaagactatttgcttgacctcttc |
13392575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 17 - 334
Target Start/End: Complemental strand, 10068833 - 10068517
Alignment:
| Q |
17 |
aaataattcaacgtggtaatgatttcctattgtgaaagattcaatattacctccacgttttgattttatgcaaaagaatgtatcatccatgtttggaatg |
116 |
Q |
| |
|
||||||||||| ||| ||||| || ||||||||||||||||| | ||| | |||| ||||||||| |||| || | ||| ||||||||||||| |
|
|
| T |
10068833 |
aaataattcaatgtgataatggttctatattgtgaaagattcaacactactttcacgctttgattttccatgaaagtatatgtcactcatgtttggaatg |
10068734 |
T |
 |
| Q |
117 |
ttaatgtcatgcttattgcaaaataaaattatctcctccaataaaggttctcattcatcatctcttagagtttataatcggccatttgtgatgttaatca |
216 |
Q |
| |
|
| | |||||||| ||||||||||||| ||| ||| | ||||||| ||||||| |||||||||| ||||||| |||| | ||||||||| ||| || |
|
|
| T |
10068733 |
tga-tgtcatgcatattgcaaaataattttacctcatataataaagattctcatccatcatctctaagagtttgtaattgtttctttgtgatgctaacca |
10068635 |
T |
 |
| Q |
217 |
agttcataggattgacgatgtcttgatctttcctttgcaaagcttgtggcaattcatttgacatacctaagacctttttcatcaaatgcaatgtgggtgc |
316 |
Q |
| |
|
| ||||| |||||| ||||||||||||||||||||||| ||| | |||||||||||| || |||||||| |||||||| ||||| ||||| |||| |
|
|
| T |
10068634 |
gttgcatagcattgacaatgtcttgatctttcctttgcaatatttgcgacaattcatttgagatgcctaagacttttttcattaaatgtaatgttagtgc |
10068535 |
T |
 |
| Q |
317 |
gaaatcaaaattattcat |
334 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
10068534 |
aaaatcaaaaatattcat |
10068517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 206; Significance: 1e-112; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 17 - 414
Target Start/End: Complemental strand, 29638398 - 29638001
Alignment:
| Q |
17 |
aaataattcaacgtggtaatgatttcctattgtgaaagattcaatattacctccacgttttgattttatgcaaaagaatgtatcatccatgtttggaatg |
116 |
Q |
| |
|
||||||||||| | |||||||||| |||||||||| ||||||| |||||||||||||||||| ||| | |||||| ||||||||||| |||||||| |
|
|
| T |
29638398 |
aaataattcaatgcggtaatgattacctattgtgatagattcagcattacctccacgttttgactttccacggaagaatatatcatccatgcttggaatg |
29638299 |
T |
 |
| Q |
117 |
ttaatgtcatgcttattgcaaaataaaattatctcctccaataaaggttctcattcatcatctcttagagtttataatcggccatttgtgatgttaatca |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| || || |||||| | ||||||||| ||| | |
|
|
| T |
29638298 |
ttaatgtcatgcttattgcaaaataaaattacctcctccaataaaggttcccatccatcatctcttaaagcttgtaatcgctcctttgtgatgctaacta |
29638199 |
T |
 |
| Q |
217 |
agttcataggattgacgatgtcttgatctttcctttgcaaagcttgtggcaattcatttgacatacctaagacctttttcatcaaatgcaatgtgggtgc |
316 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||||| ||||||| |||||||||||| | | ||||||||||||||||||||||||||||| |||| |
|
|
| T |
29638198 |
ggttcatagcattgacaatgtcttgatctttcctttgcaatgcttgtgacaattcatttgaaaaatctaagacctttttcatcaaatgcaatgtgagtgc |
29638099 |
T |
 |
| Q |
317 |
gaaatcaaaattattcattagaattaaaagattgtttgcttctcctcttccatcattaactggtttatcatctttcaacatttcaagaacatcagtta |
414 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |||||||| ||||||||||| |||| || | ||||||| |||||||||||||||||||||||| |
|
|
| T |
29638098 |
aaaatcaaaagtattcatgagaattaaaagaccttttgcttcacctcttccatctttaattgatacatcatctctcaacatttcaagaacatcagtta |
29638001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 416
Target Start/End: Original strand, 1624020 - 1624203
Alignment:
| Q |
233 |
gatgtcttgatctttcctttgcaaagcttgtggcaattcatttgacatacctaagacctttttcatcaaatgcaatgtgggtgcgaaatcaaaattattc |
332 |
Q |
| |
|
|||||||||||||||| ||||||| || | | |||||||||||| ||| | ||| | |||||||| ||||| || | |||| ||| |||||| | | |
|
|
| T |
1624020 |
gatgtcttgatctttcttttgcaatgcgtctaacaattcatttgaaatatccaagtcatttttcattaaatgtaacacgagtgcaaaactaaaattgtcc |
1624119 |
T |
 |
| Q |
333 |
attagaattaaaagattgtttgcttctcctcttccatcattaactggtttatcatctttcaacatttcaagaacatcagttaca |
416 |
Q |
| |
|
||||||| || |||| |||||||| |||||| |||| ||||||| | || ||||| ||||||||||||||| |||||||| |
|
|
| T |
1624120 |
attagaagtataagaccatttgcttcgcctcttgcatccttaactgatacttcttcttttaacatttcaagaacaccagttaca |
1624203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 1623900 - 1623993
Alignment:
| Q |
102 |
tccatgtttggaatgttaatgtcatgcttattgcaaaataaaattatctcctccaataaaggttctcattcatcatctcttagagtttataatc |
195 |
Q |
| |
|
||||||||||||||||| ||| | || ||||||||||||| || |||| ||||| ||| |||| |||||||||||||| ||||| ||||| |
|
|
| T |
1623900 |
tccatgtttggaatgttcatgccccgcccattgcaaaataaatctacatccttcaatataggatctcgttcatcatctcttaaagtttgtaatc |
1623993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 17 - 414
Target Start/End: Original strand, 41500573 - 41500970
Alignment:
| Q |
17 |
aaataattcaacgtggtaatgatttcctattgtgaaagattcaatattacctccacgttttgattttatgcaaaagaatgtatcatccatgtttggaatg |
116 |
Q |
| |
|
||||||||||| | |||||||||| |||||||||| ||||||| |||||||||||| |||| ||| | |||||| ||||||||||| |||||||| |
|
|
| T |
41500573 |
aaataattcaatgcggtaatgattccctattgtgatagattcagcgttacctccacgtattgactttccacggaagaatatatcatccatgcttggaatg |
41500672 |
T |
 |
| Q |
117 |
ttaatgtcatgcttattgcaaaataaaattatctcctccaataaaggttctcattcatcatctcttagagtttataatcggccatttgtgatgttaatca |
216 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||||| || |||||| | ||||||||| |||| | |
|
|
| T |
41500673 |
ttaatgtcatgcttattgccaaataaaattacctcctccaataaaggttcccatccatcatctcttagagcttgtaatcgctcctttgtgatgctaatta |
41500772 |
T |
 |
| Q |
217 |
agttcataggattgacgatgtcttgatctttcctttgcaaagcttgtggcaattcatttgacatacctaagacctttttcatcaaatgcaatgtgggtgc |
316 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||||||||||| |||||||||||| |||| |
|
|
| T |
41500773 |
ggttcatagcattgacgatgtcttgatctttcctttgcaatgcttgtgacaattcatttgaaaaacctaagacctttttcattaaatgcaatgtgagtgc |
41500872 |
T |
 |
| Q |
317 |
gaaatcaaaattattcattagaattaaaagattgtttgcttctcctcttccatcattaactggtttatcatctttcaacatttcaagaacatcagtta |
414 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |||||||| ||||||||||| |||| || | ||||||| |||||||||||||||||||||||| |
|
|
| T |
41500873 |
aaaatcaaaagtattcatgagaattaaaagaccttttgcttcacctcttccatctttaattgatacatcatctctcaacatttcaagaacatcagtta |
41500970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 17 - 414
Target Start/End: Original strand, 676160 - 676557
Alignment:
| Q |
17 |
aaataattcaacgtggtaatgatttcctattgtgaaagattcaatattacctccacgttttgattttatgcaaaagaatgtatcatccatgtttggaatg |
116 |
Q |
| |
|
||||||||||| | |||||||||| |||||||||| ||||||| |||||||||||||||||| ||| | |||||| ||||||||||| |||||||| |
|
|
| T |
676160 |
aaataattcaatgcggtaatgattacctattgtgatagattcagcattacctccacgttttgactttccacggaagaatatatcatccatgcttggaatg |
676259 |
T |
 |
| Q |
117 |
ttaatgtcatgcttattgcaaaataaaattatctcctccaataaaggttctcattcatcatctcttagagtttataatcggccatttgtgatgttaatca |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| || || |||||| | ||||||||| ||| | |
|
|
| T |
676260 |
ttaatgtcatgcttattgcaaaataaaattacctcctccaataaaggttcccatccatcatctcttaaagcttgtaatcgctcctttgtgatgctaacta |
676359 |
T |
 |
| Q |
217 |
agttcataggattgacgatgtcttgatctttcctttgcaaagcttgtggcaattcatttgacatacctaagacctttttcatcaaatgcaatgtgggtgc |
316 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||||| ||||||| |||||||||||| | | ||||||||||||||||||||||||||||| |||| |
|
|
| T |
676360 |
ggttcatagcattgacaatgtcttgatctttcctttgcaatgcttgtgacaattcatttgaaaaatctaagacctttttcatcaaatgcaatgtgagtgc |
676459 |
T |
 |
| Q |
317 |
gaaatcaaaattattcattagaattaaaagattgtttgcttctcctcttccatcattaactggtttatcatctttcaacatttcaagaacatcagtta |
414 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |||||||| ||||||||||| |||| || | ||||||| |||||||||||||||||||||||| |
|
|
| T |
676460 |
aaaatcaaaagtattcatgagaattaaaagaccttttgcttcacctcttccatctttaattgatacatcatctctcaacatttcaagaacatcagtta |
676557 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 168; Significance: 7e-90; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 11 - 334
Target Start/End: Original strand, 250847 - 251170
Alignment:
| Q |
11 |
aatattaaataattcaacgtggtaatgatttcctattgtgaaagattcaatattacctccacgttttgattttatgcaaaagaatgtatcatccatgttt |
110 |
Q |
| |
|
||||| ||||||||||| | |||||||||| ||||| ||| |||||||| |||||||||||||||||||||| | |||||| |||||||||||||| |
|
|
| T |
250847 |
aatataaaataattcaatgcggtaatgattctctattatgatagattcaacattacctccacgttttgattttctatggaagaatatatcatccatgttt |
250946 |
T |
 |
| Q |
111 |
ggaatgttaatgtcatgcttattgcaaaataaaattatctcctccaataaaggttctcattcatcatctcttagagtttataatcggccatttgtgatgt |
210 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||| ||| |||||||||||||| || ||||||||||||||| || |||||| | |||||||||| |
|
|
| T |
250947 |
ggaatgctaatatcatgcttattgcaaaataaaattacctcatccaataaaggttcctatccatcatctcttagagcttgtaatcgctcctttgtgatgt |
251046 |
T |
 |
| Q |
211 |
taatcaagttcataggattgacgatgtcttgatctttcctttgcaaagcttgtggcaattcatttgacatacctaagacctttttcatcaaatgcaatgt |
310 |
Q |
| |
|
||| || ||||||| ||||| ||| |||||||||||||||||||| ||||||| ||||||||| || |||| ||||||||||||||||||||||||||| |
|
|
| T |
251047 |
taaccaggttcataacattgatgatatcttgatctttcctttgcaatgcttgtgacaattcattcgaaatacttaagacctttttcatcaaatgcaatgt |
251146 |
T |
 |
| Q |
311 |
gggtgcgaaatcaaaattattcat |
334 |
Q |
| |
|
| |||| ||||||||||||||||| |
|
|
| T |
251147 |
gagtgcaaaatcaaaattattcat |
251170 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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