View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3019-Insertion-17 (Length: 78)
Name: NF3019-Insertion-17
Description: NF3019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3019-Insertion-17 |
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| [»] scaffold0334 (1 HSPs) |
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Alignment Details
Target: scaffold0334 (Bit Score: 53; Significance: 4e-22; HSPs: 1)
Name: scaffold0334
Description:
Target: scaffold0334; HSP #1
Raw Score: 53; E-Value: 4e-22
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 16766 - 16692
Alignment:
| Q |
7 |
accaatatgctttaaaat---caagtcacgacaatgggcataatactccaagaaacataactgcaattgaaatcg |
78 |
Q |
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| T |
16766 |
accaatatgctttaaaacaaccaagtcacgacaatgggcataatactccaagaaacataactgcaattggaatcg |
16692 |
T |
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