View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3019R-Insertion-5 (Length: 293)

Name: NF3019R-Insertion-5
Description: NF3019R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3019R-Insertion-5
NF3019R-Insertion-5
[»] chr8 (1 HSPs)
chr8 (9-293)||(43173288-43173572)


Alignment Details
Target: chr8 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 9 - 293
Target Start/End: Original strand, 43173288 - 43173572
Alignment:
Q  9 aaccctttataataattgtgccgttgcctttcataaaacaggaggactctgattgggattgctctttgcacctaccactttgggttcccctaacagaaaa 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43173288 aaccctttataataattgtgccgttacctttcataaaacaggaggactctgattgggattgctctttgcacctaccactttgggttcccctaacagaaaa 43173387  T
Q  109 ggcttcaattgaggagcacttagaggaatggacagaacaattgaaagcaagtggggctgacattgcttctctctctgcttccttgaagaaaccattacgt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43173388 ggcttcaattgaggagcacttagaggaatggacagaacaattgaaagcaagtggggctgacattgcttccctctctgcttccttgaagaaaccattacgt 43173487  T
Q  209 cctctatggatttctcagaaaactgtcatatggttaaatgaagtacctcaccatgattcatgggatttcactccaatcatacttg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43173488 cctctatggatttctcagaaaactgtcatatggttaaatgaagtacctcaccatgattcatgggatttcactccaatcatacttg 43173572  T

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