View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3019_1D_low_18 (Length: 258)

Name: NF3019_1D_low_18
Description: NF3019_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3019_1D_low_18
NF3019_1D_low_18
[»] chr7 (65 HSPs)
chr7 (64-258)||(12465229-12465422)
chr7 (64-258)||(12372164-12372357)
chr7 (64-258)||(8851128-8851321)
chr7 (64-258)||(12322899-12323092)
chr7 (64-254)||(13147441-13147630)
chr7 (64-254)||(32433558-32433747)
chr7 (64-254)||(11067362-11067551)
chr7 (64-256)||(12127132-12127323)
chr7 (68-258)||(16999323-16999515)
chr7 (96-258)||(20620176-20620337)
chr7 (96-258)||(14180399-14180560)
chr7 (96-258)||(20214037-20214198)
chr7 (96-258)||(20586242-20586403)
chr7 (100-258)||(46386093-46386250)
chr7 (99-247)||(10277228-10277375)
chr7 (96-258)||(24269948-24270109)
chr7 (64-157)||(44374833-44374926)
chr7 (64-157)||(44383698-44383791)
chr7 (96-220)||(47974821-47974944)
chr7 (96-199)||(14218896-14219000)
chr7 (96-199)||(35771442-35771546)
chr7 (96-218)||(15095638-15095759)
chr7 (64-147)||(43276713-43276796)
chr7 (96-218)||(48807326-48807448)
chr7 (96-256)||(33002053-33002204)
chr7 (96-195)||(16078281-16078381)
chr7 (96-199)||(12754613-12754716)
chr7 (96-218)||(8135239-8135359)
chr7 (99-225)||(25943041-25943166)
chr7 (96-199)||(4071767-4071871)
chr7 (67-147)||(19195611-19195691)
chr7 (96-218)||(15140143-15140264)
chr7 (67-141)||(18074619-18074693)
chr7 (68-124)||(19283079-19283135)
chr7 (96-218)||(13698639-13698761)
chr7 (99-165)||(13744662-13744728)
chr7 (82-147)||(4690650-4690715)
chr7 (137-218)||(13132363-13132443)
chr7 (64-125)||(14160825-14160886)
chr7 (96-217)||(15623950-15624069)
chr7 (96-176)||(10658852-10658932)
chr7 (96-199)||(15289052-15289156)
chr7 (67-125)||(58385-58443)
chr7 (100-216)||(12557853-12557968)
chr7 (96-196)||(36704572-36704673)
chr7 (96-218)||(11054642-11054764)
chr7 (96-147)||(29052183-29052234)
chr7 (64-147)||(38299748-38299833)
chr7 (135-216)||(41284963-41285043)
chr7 (64-125)||(13744477-13744540)
chr7 (218-258)||(25942361-25942401)
chr7 (96-147)||(16250223-16250274)
chr7 (96-147)||(16550006-16550057)
chr7 (96-147)||(16615605-16615656)
chr7 (96-147)||(18955330-18955381)
chr7 (64-147)||(32160169-32160252)
chr7 (137-196)||(36685187-36685246)
chr7 (96-125)||(8488095-8488124)
chr7 (96-125)||(8513754-8513783)
chr7 (64-113)||(14156361-14156410)
chr7 (95-167)||(14928289-14928362)
chr7 (95-167)||(15351755-15351828)
chr7 (84-125)||(25943289-25943330)
chr7 (82-147)||(43745656-43745721)
chr7 (95-196)||(32302177-32302279)
[»] chr6 (34 HSPs)
chr6 (64-258)||(7827862-7828055)
chr6 (64-258)||(19655200-19655393)
chr6 (64-258)||(23150256-23150449)
chr6 (64-254)||(27125446-27125635)
chr6 (67-254)||(18703458-18703648)
chr6 (67-254)||(18709393-18709583)
chr6 (96-258)||(15890713-15890874)
chr6 (96-246)||(27329982-27330131)
chr6 (96-246)||(27390722-27390871)
chr6 (96-195)||(24267801-24267900)
chr6 (100-257)||(19235015-19235170)
chr6 (98-220)||(18585733-18585854)
chr6 (96-214)||(18928614-18928732)
chr6 (96-256)||(28948466-28948626)
chr6 (96-257)||(30673403-30673556)
chr6 (96-214)||(19401028-19401145)
chr6 (184-257)||(19167926-19167998)
chr6 (96-199)||(31731905-31732009)
chr6 (96-170)||(27572123-27572198)
chr6 (64-113)||(17318135-17318184)
chr6 (96-156)||(15998880-15998940)
chr6 (64-147)||(20410481-20410564)
chr6 (96-198)||(24550169-24550271)
chr6 (96-218)||(23501601-23501723)
chr6 (96-147)||(12041621-12041672)
chr6 (96-165)||(19167854-19167923)
chr6 (64-125)||(19825455-19825516)
chr6 (68-125)||(23431420-23431477)
chr6 (64-115)||(25922033-25922084)
chr6 (99-139)||(29625191-29625231)
chr6 (96-147)||(15173454-15173505)
chr6 (185-251)||(18259262-18259328)
chr6 (95-196)||(19772666-19772767)
chr6 (84-125)||(10446239-10446280)
[»] chr4 (37 HSPs)
chr4 (64-258)||(25091543-25091736)
chr4 (67-258)||(53630446-53630636)
chr4 (64-258)||(10356405-10356598)
chr4 (73-258)||(11425833-11426017)
chr4 (64-258)||(42875687-42875880)
chr4 (74-258)||(16998415-16998598)
chr4 (68-258)||(19610214-19610403)
chr4 (96-258)||(15115112-15115273)
chr4 (96-257)||(37019561-37019721)
chr4 (99-247)||(6633541-6633688)
chr4 (99-247)||(46001535-46001682)
chr4 (96-216)||(9924085-9924205)
chr4 (96-213)||(14549695-14549811)
chr4 (64-147)||(10694214-10694297)
chr4 (64-147)||(10907980-10908063)
chr4 (64-147)||(12424259-12424342)
chr4 (96-199)||(19434560-19434663)
chr4 (100-218)||(9870449-9870568)
chr4 (96-199)||(11478654-11478758)
chr4 (96-176)||(15613061-15613141)
chr4 (96-198)||(21144-21247)
chr4 (96-176)||(51993532-51993612)
chr4 (64-147)||(25513851-25513934)
chr4 (182-249)||(26921708-26921774)
chr4 (64-125)||(19022366-19022427)
chr4 (68-147)||(9639010-9639089)
chr4 (64-147)||(33186903-33186986)
chr4 (82-147)||(2424374-2424439)
chr4 (64-125)||(40230328-40230389)
chr4 (96-147)||(35811377-35811428)
chr4 (96-151)||(14186955-14187009)
chr4 (96-147)||(15008963-15009014)
chr4 (96-194)||(21062593-21062692)
chr4 (68-125)||(33243267-33243324)
chr4 (96-147)||(16296938-16296989)
chr4 (96-147)||(40620532-40620583)
chr4 (64-125)||(10273405-10273468)
[»] chr1 (34 HSPs)
chr1 (64-258)||(19676601-19676794)
chr1 (66-258)||(21046020-21046211)
chr1 (68-254)||(16058287-16058471)
chr1 (64-258)||(20633600-20633796)
chr1 (96-258)||(42912939-42913100)
chr1 (96-199)||(13302849-13302953)
chr1 (96-256)||(51324396-51324555)
chr1 (96-220)||(24723352-24723475)
chr1 (96-257)||(21168825-21168984)
chr1 (96-220)||(7051923-7052046)
chr1 (96-198)||(42697732-42697835)
chr1 (64-196)||(22350667-22350795)
chr1 (96-218)||(7320595-7320716)
chr1 (96-185)||(4595854-4595944)
chr1 (64-125)||(20588660-20588721)
chr1 (64-125)||(20593198-20593259)
chr1 (96-176)||(21239050-21239130)
chr1 (64-147)||(28476703-28476786)
chr1 (96-147)||(51336479-51336530)
chr1 (64-125)||(41225423-41225484)
chr1 (64-125)||(41226676-41226737)
chr1 (96-147)||(12327744-12327795)
chr1 (64-147)||(12710867-12710950)
chr1 (64-125)||(8306628-8306689)
chr1 (96-220)||(44822022-44822145)
chr1 (96-147)||(29763633-29763684)
chr1 (96-198)||(45755468-45755571)
chr1 (96-147)||(46197746-46197797)
chr1 (99-165)||(45499374-45499439)
chr1 (96-147)||(50001476-50001527)
chr1 (135-196)||(11946391-11946453)
chr1 (96-125)||(22145667-22145696)
chr1 (153-200)||(14801337-14801384)
chr1 (153-200)||(14810211-14810258)
[»] scaffold0737 (1 HSPs)
scaffold0737 (64-254)||(4683-4872)
[»] chr3 (54 HSPs)
chr3 (68-258)||(17044856-17045045)
chr3 (64-249)||(22306552-22306736)
chr3 (68-258)||(17047016-17047205)
chr3 (68-258)||(49900620-49900809)
chr3 (68-258)||(17518846-17519035)
chr3 (68-258)||(17533708-17533897)
chr3 (96-258)||(40807886-40808047)
chr3 (64-258)||(41172340-41172533)
chr3 (64-254)||(11259325-11259514)
chr3 (64-258)||(17693957-17694150)
chr3 (68-258)||(17538996-17539185)
chr3 (64-258)||(35354492-35354685)
chr3 (96-258)||(40812723-40812884)
chr3 (96-258)||(44274308-44274469)
chr3 (68-245)||(14508749-14508926)
chr3 (110-258)||(50348041-50348188)
chr3 (96-258)||(10563599-10563759)
chr3 (68-258)||(15931481-15931669)
chr3 (99-247)||(10311428-10311575)
chr3 (64-158)||(17541423-17541517)
chr3 (96-256)||(19568209-19568368)
chr3 (120-213)||(35064566-35064658)
chr3 (80-218)||(11563654-11563792)
chr3 (96-216)||(33565018-33565138)
chr3 (96-256)||(9510917-9511076)
chr3 (96-256)||(9518892-9519051)
chr3 (96-199)||(16050875-16050978)
chr3 (96-218)||(42323972-42324094)
chr3 (96-216)||(35960929-35961049)
chr3 (198-258)||(35064682-35064742)
chr3 (203-258)||(5200277-5200332)
chr3 (68-147)||(15566744-15566823)
chr3 (96-199)||(13185842-13185946)
chr3 (98-196)||(11885560-11885658)
chr3 (96-199)||(24177737-24177840)
chr3 (96-218)||(49968860-49968981)
chr3 (64-218)||(45530572-45530725)
chr3 (96-176)||(12509351-12509431)
chr3 (64-116)||(50347604-50347656)
chr3 (96-147)||(15446869-15446920)
chr3 (112-191)||(37039005-37039085)
chr3 (96-163)||(36528851-36528918)
chr3 (68-125)||(6159427-6159484)
chr3 (64-125)||(14641517-14641578)
chr3 (72-125)||(50350793-50350846)
chr3 (68-125)||(53646032-53646089)
chr3 (96-136)||(5200244-5200284)
chr3 (98-198)||(14250085-14250185)
chr3 (96-147)||(16979912-16979963)
chr3 (96-147)||(17208524-17208575)
chr3 (96-147)||(22652773-22652824)
chr3 (95-196)||(22758834-22758935)
chr3 (64-125)||(3527124-3527187)
chr3 (64-125)||(12917273-12917336)
[»] chr2 (42 HSPs)
chr2 (64-254)||(24780809-24780998)
chr2 (67-258)||(9975819-9976009)
chr2 (64-254)||(5031098-5031287)
chr2 (64-258)||(24436538-24436731)
chr2 (74-258)||(17307376-17307559)
chr2 (96-258)||(24516076-24516237)
chr2 (68-248)||(22251421-22251600)
chr2 (64-258)||(2523716-2523909)
chr2 (96-254)||(40912214-40912371)
chr2 (82-258)||(19201187-19201362)
chr2 (99-247)||(37270600-37270747)
chr2 (132-258)||(27484514-27484639)
chr2 (143-258)||(36841154-36841268)
chr2 (96-218)||(25142133-25142255)
chr2 (96-220)||(357809-357932)
chr2 (97-220)||(1383545-1383667)
chr2 (64-195)||(27852619-27852747)
chr2 (68-220)||(22501897-22502050)
chr2 (68-220)||(22509831-22509984)
chr2 (96-218)||(3539766-3539888)
chr2 (96-195)||(44072509-44072608)
chr2 (96-198)||(25046066-25046169)
chr2 (64-124)||(21369316-21369376)
chr2 (68-143)||(149474-149549)
chr2 (96-198)||(5986125-5986228)
chr2 (64-125)||(14179697-14179758)
chr2 (64-107)||(36841267-36841310)
chr2 (96-213)||(22259974-22260089)
chr2 (65-125)||(14183436-14183496)
chr2 (110-196)||(18390229-18390315)
chr2 (96-147)||(21080970-21081021)
chr2 (64-119)||(31521197-31521252)
chr2 (96-218)||(19358820-19358942)
chr2 (64-128)||(20916326-20916390)
chr2 (164-219)||(24884399-24884453)
chr2 (96-147)||(25184189-25184240)
chr2 (96-196)||(14694276-14694377)
chr2 (161-194)||(18388256-18388289)
chr2 (84-125)||(23801518-23801559)
chr2 (68-115)||(12626399-12626447)
chr2 (103-147)||(18357975-18358019)
chr2 (99-147)||(21915624-21915672)
[»] scaffold1283 (1 HSPs)
scaffold1283 (67-258)||(440-630)
[»] scaffold0064 (1 HSPs)
scaffold0064 (64-258)||(58636-58829)
[»] chr8 (52 HSPs)
chr8 (64-254)||(19140659-19140847)
chr8 (64-258)||(42817876-42818069)
chr8 (70-258)||(39935982-39936172)
chr8 (96-258)||(20083639-20083800)
chr8 (105-258)||(5082222-5082374)
chr8 (82-258)||(5761424-5761598)
chr8 (99-258)||(6573060-6573218)
chr8 (96-258)||(6101754-6101915)
chr8 (99-247)||(37292606-37292753)
chr8 (99-247)||(6202677-6202824)
chr8 (148-258)||(20178581-20178692)
chr8 (96-250)||(20397511-20397656)
chr8 (96-256)||(22532133-22532292)
chr8 (96-256)||(22536818-22536977)
chr8 (64-147)||(18761448-18761531)
chr8 (80-185)||(20022025-20022131)
chr8 (100-256)||(31722498-31722653)
chr8 (96-199)||(17906850-17906953)
chr8 (96-218)||(45469220-45469342)
chr8 (99-256)||(39694281-39694437)
chr8 (96-199)||(36727039-36727143)
chr8 (96-218)||(22317912-22318033)
chr8 (82-147)||(4380604-4380669)
chr8 (64-135)||(23943795-23943866)
chr8 (64-142)||(22258275-22258353)
chr8 (64-125)||(21579175-21579236)
chr8 (64-125)||(36306019-36306080)
chr8 (96-199)||(23899988-23900092)
chr8 (66-125)||(18834444-18834503)
chr8 (96-198)||(19700109-19700212)
chr8 (64-147)||(22208269-22208352)
chr8 (96-198)||(23948211-23948314)
chr8 (96-176)||(23419411-23419492)
chr8 (64-125)||(29762837-29762898)
chr8 (100-199)||(17218649-17218749)
chr8 (64-115)||(12037133-12037184)
chr8 (96-162)||(22583661-22583727)
chr8 (100-162)||(23889784-23889846)
chr8 (99-165)||(36305837-36305903)
chr8 (96-171)||(22254741-22254817)
chr8 (96-147)||(26454708-26454759)
chr8 (145-196)||(42265559-42265610)
chr8 (96-130)||(17158964-17158998)
chr8 (96-130)||(19880839-19880873)
chr8 (96-130)||(23479099-23479133)
chr8 (64-125)||(22345186-22345249)
chr8 (64-125)||(22356846-22356909)
chr8 (99-139)||(34758875-34758915)
chr8 (96-125)||(12577901-12577930)
chr8 (82-143)||(21514695-21514756)
chr8 (96-125)||(22610268-22610297)
chr8 (99-147)||(25657518-25657566)
[»] scaffold0111 (2 HSPs)
scaffold0111 (68-256)||(12506-12693)
scaffold0111 (98-258)||(5273-5432)
[»] scaffold0407 (1 HSPs)
scaffold0407 (72-258)||(11251-11436)
[»] scaffold0001 (3 HSPs)
scaffold0001 (64-254)||(31888-32077)
scaffold0001 (64-254)||(37195-37384)
scaffold0001 (68-258)||(77577-77766)
[»] scaffold1633 (1 HSPs)
scaffold1633 (65-258)||(1095-1287)
[»] scaffold0077 (2 HSPs)
scaffold0077 (65-258)||(34229-34421)
scaffold0077 (96-176)||(5921-6001)
[»] scaffold1941 (1 HSPs)
scaffold1941 (96-258)||(28-189)
[»] scaffold0080 (1 HSPs)
scaffold0080 (64-258)||(21762-21955)
[»] chr5 (26 HSPs)
chr5 (68-258)||(21300017-21300206)
chr5 (99-247)||(7484903-7485050)
chr5 (64-258)||(19921528-19921727)
chr5 (96-257)||(20566445-20566597)
chr5 (86-245)||(31622028-31622178)
chr5 (90-220)||(36508628-36508757)
chr5 (64-147)||(23199176-23199259)
chr5 (96-196)||(21617929-21618030)
chr5 (99-249)||(22111715-22111876)
chr5 (96-199)||(20469177-20469281)
chr5 (96-220)||(31456888-31457011)
chr5 (64-125)||(21398613-21398674)
chr5 (96-147)||(6551291-6551342)
chr5 (96-198)||(10954038-10954140)
chr5 (96-196)||(10774665-10774764)
chr5 (98-147)||(30616614-30616663)
chr5 (64-125)||(32607285-32607346)
chr5 (96-147)||(266038-266089)
chr5 (96-147)||(17011728-17011779)
chr5 (96-176)||(25249829-25249910)
chr5 (96-176)||(25313613-25313694)
chr5 (135-216)||(31251931-31252011)
chr5 (64-120)||(8503857-8503913)
chr5 (164-219)||(17876132-17876186)
chr5 (96-147)||(18744874-18744925)
chr5 (145-218)||(21405678-21405751)
[»] scaffold1766 (1 HSPs)
scaffold1766 (96-258)||(697-858)
[»] scaffold0241 (2 HSPs)
scaffold0241 (96-258)||(3072-3233)
scaffold0241 (153-258)||(2454-2558)
[»] scaffold0207 (1 HSPs)
scaffold0207 (96-258)||(13393-13554)
[»] scaffold0020 (2 HSPs)
scaffold0020 (96-258)||(169000-169161)
scaffold0020 (91-258)||(143501-143667)
[»] scaffold0334 (1 HSPs)
scaffold0334 (96-258)||(408-569)
[»] scaffold0026 (1 HSPs)
scaffold0026 (96-258)||(146613-146774)
[»] scaffold0019 (2 HSPs)
scaffold0019 (64-199)||(24100-24235)
scaffold0019 (95-195)||(30023-30123)
[»] scaffold0632 (1 HSPs)
scaffold0632 (96-258)||(1055-1216)
[»] scaffold0004 (5 HSPs)
scaffold0004 (82-258)||(328275-328452)
scaffold0004 (99-249)||(75691-75834)
scaffold0004 (103-251)||(72841-72980)
scaffold0004 (99-199)||(110121-110222)
scaffold0004 (64-125)||(73109-73172)
[»] scaffold0036 (1 HSPs)
scaffold0036 (64-209)||(78154-78298)
[»] scaffold0149 (2 HSPs)
scaffold0149 (96-235)||(29574-29711)
scaffold0149 (96-220)||(21539-21662)
[»] scaffold0047 (1 HSPs)
scaffold0047 (64-257)||(78955-79132)
[»] scaffold0285 (1 HSPs)
scaffold0285 (96-257)||(19652-19804)
[»] scaffold0113 (1 HSPs)
scaffold0113 (96-222)||(35418-35541)
[»] scaffold0956 (1 HSPs)
scaffold0956 (64-178)||(2524-2638)
[»] scaffold0037 (3 HSPs)
scaffold0037 (100-256)||(112971-113127)
scaffold0037 (96-214)||(81501-81618)
scaffold0037 (96-256)||(117808-117960)
[»] scaffold0112 (1 HSPs)
scaffold0112 (96-257)||(2787-2940)
[»] scaffold0230 (1 HSPs)
scaffold0230 (98-220)||(6688-6809)
[»] scaffold0083 (2 HSPs)
scaffold0083 (96-256)||(10756-10913)
scaffold0083 (96-170)||(5046-5120)
[»] scaffold0213 (1 HSPs)
scaffold0213 (64-147)||(19207-19290)
[»] scaffold0203 (1 HSPs)
scaffold0203 (68-147)||(17913-17992)
[»] scaffold0174 (6 HSPs)
scaffold0174 (99-251)||(5167-5310)
scaffold0174 (99-251)||(11287-11430)
scaffold0174 (99-250)||(19605-19754)
scaffold0174 (64-147)||(5454-5537)
scaffold0174 (64-124)||(11639-11699)
scaffold0174 (64-125)||(19878-19939)
[»] scaffold0628 (1 HSPs)
scaffold0628 (80-218)||(1043-1181)
[»] scaffold0156 (1 HSPs)
scaffold0156 (101-220)||(16532-16650)
[»] scaffold0032 (1 HSPs)
scaffold0032 (68-147)||(61821-61900)
[»] scaffold0802 (1 HSPs)
scaffold0802 (96-216)||(4710-4830)
[»] scaffold0100 (1 HSPs)
scaffold0100 (99-247)||(26638-26779)
[»] scaffold0008 (1 HSPs)
scaffold0008 (96-195)||(135505-135604)
[»] scaffold0431 (1 HSPs)
scaffold0431 (64-147)||(5633-5716)
[»] scaffold0379 (2 HSPs)
scaffold0379 (99-213)||(10741-10846)
scaffold0379 (64-125)||(10969-11030)
[»] scaffold0162 (1 HSPs)
scaffold0162 (64-125)||(23861-23922)
[»] scaffold0175 (1 HSPs)
scaffold0175 (96-218)||(8571-8693)
[»] scaffold0040 (1 HSPs)
scaffold0040 (96-220)||(106052-106175)
[»] scaffold0028 (1 HSPs)
scaffold0028 (95-218)||(3052-3174)
[»] scaffold0848 (1 HSPs)
scaffold0848 (100-218)||(2026-2143)
[»] scaffold0075 (1 HSPs)
scaffold0075 (96-198)||(60843-60946)
[»] scaffold0010 (1 HSPs)
scaffold0010 (104-198)||(126313-126407)
[»] scaffold0220 (1 HSPs)
scaffold0220 (96-196)||(19905-20005)
[»] scaffold0123 (1 HSPs)
scaffold0123 (96-218)||(7205-7328)
[»] scaffold0056 (1 HSPs)
scaffold0056 (96-199)||(67068-67172)
[»] scaffold0853 (1 HSPs)
scaffold0853 (64-147)||(2423-2506)
[»] scaffold0256 (1 HSPs)
scaffold0256 (103-165)||(1855-1917)
[»] scaffold0251 (1 HSPs)
scaffold0251 (96-213)||(20087-20202)
[»] scaffold1256 (1 HSPs)
scaffold1256 (82-147)||(2187-2252)
[»] scaffold0328 (1 HSPs)
scaffold0328 (68-125)||(18613-18670)
[»] scaffold0041 (1 HSPs)
scaffold0041 (100-149)||(5712-5761)
[»] scaffold0671 (1 HSPs)
scaffold0671 (96-198)||(4888-4991)
[»] scaffold0589 (1 HSPs)
scaffold0589 (96-198)||(4333-4436)
[»] scaffold0107 (1 HSPs)
scaffold0107 (68-115)||(13525-13572)
[»] scaffold0071 (1 HSPs)
scaffold0071 (96-147)||(15272-15323)
[»] scaffold0003 (1 HSPs)
scaffold0003 (99-198)||(96347-96446)
[»] scaffold0002 (1 HSPs)
scaffold0002 (96-198)||(398510-398613)
[»] scaffold0516 (1 HSPs)
scaffold0516 (82-143)||(5292-5353)
[»] scaffold0676 (1 HSPs)
scaffold0676 (68-147)||(2881-2960)
[»] scaffold0261 (1 HSPs)
scaffold0261 (182-249)||(6620-6686)
[»] scaffold0065 (1 HSPs)
scaffold0065 (100-198)||(52549-52648)
[»] scaffold0042 (1 HSPs)
scaffold0042 (96-194)||(29340-29439)
[»] scaffold0819 (1 HSPs)
scaffold0819 (96-196)||(5318-5417)
[»] scaffold0439 (1 HSPs)
scaffold0439 (139-219)||(12323-12403)
[»] scaffold0577 (1 HSPs)
scaffold0577 (96-196)||(9011-9110)
[»] scaffold0414 (1 HSPs)
scaffold0414 (65-125)||(11130-11190)
[»] scaffold0515 (1 HSPs)
scaffold0515 (96-147)||(5029-5080)
[»] scaffold0436 (1 HSPs)
scaffold0436 (96-147)||(8960-9011)
[»] scaffold0306 (1 HSPs)
scaffold0306 (96-147)||(5029-5080)
[»] scaffold0138 (2 HSPs)
scaffold0138 (96-147)||(21097-21148)
scaffold0138 (96-147)||(34112-34163)
[»] scaffold0125 (1 HSPs)
scaffold0125 (64-115)||(28583-28634)
[»] scaffold0057 (1 HSPs)
scaffold0057 (96-147)||(69854-69905)
[»] scaffold0601 (1 HSPs)
scaffold0601 (96-130)||(197-231)
[»] scaffold0859 (1 HSPs)
scaffold0859 (133-218)||(4612-4696)
[»] scaffold0151 (1 HSPs)
scaffold0151 (96-196)||(31060-31159)
[»] scaffold0017 (1 HSPs)
scaffold0017 (98-147)||(26727-26776)
[»] scaffold0007 (1 HSPs)
scaffold0007 (96-196)||(158823-158923)
[»] scaffold0031 (1 HSPs)
scaffold0031 (64-125)||(127310-127373)
[»] scaffold0308 (1 HSPs)
scaffold0308 (145-196)||(13391-13442)
[»] scaffold0070 (1 HSPs)
scaffold0070 (68-107)||(11193-11232)
[»] scaffold0058 (1 HSPs)
scaffold0058 (99-130)||(6385-6416)
[»] scaffold0034 (1 HSPs)
scaffold0034 (96-147)||(29217-29268)
[»] scaffold1128 (1 HSPs)
scaffold1128 (135-196)||(448-510)
[»] scaffold0046 (1 HSPs)
scaffold0046 (96-130)||(21778-21812)
[»] scaffold0878 (1 HSPs)
scaffold0878 (84-125)||(3411-3452)
[»] scaffold0505 (1 HSPs)
scaffold0505 (84-125)||(4958-4999)
[»] scaffold0116 (1 HSPs)
scaffold0116 (145-194)||(35514-35563)
[»] scaffold0411 (1 HSPs)
scaffold0411 (96-183)||(13418-13505)
[»] scaffold0205 (1 HSPs)
scaffold0205 (95-194)||(30607-30706)


Alignment Details
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 12465229 - 12465422
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12465229 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12465328  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465329 gtaggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 12465422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 12372357 - 12372164
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12372357 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12372258  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12372257 gcaggttgtagttatgggaatttgagaattagg-ttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 12372164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 8851128 - 8851321
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8851128 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 8851227  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  8851228 gtaggttgtagttatgagaatttggaaattagg-ttttgaagttgtaattggttgttaatagagtataaaatctgttgaatttgtgtagaattga 8851321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 12322899 - 12323092
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12322899 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtggaactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12322998  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  12322999 gtaggttgtagttatggaaatttgggaattagg-ttttgaagttgtacttggttgttaatagaatagaaaatccgttgaatttgtgtagaattga 12323092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 64 - 254
Target Start/End: Original strand, 13147441 - 13147630
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  13147441 gagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataattctgaaattgagtttagcatgtt 13147540  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13147541 gtaggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtagaa 13147630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 64 - 254
Target Start/End: Original strand, 32433558 - 32433747
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32433558 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 32433657  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  32433658 gtaggttgtagttatgtgaatttgtgaattagg-ttttgaagttgtaattggttgttaatagagtagaaaattagttgaatttgtgtagaa 32433747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 64 - 254
Target Start/End: Complemental strand, 11067551 - 11067362
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11067551 gagcaatcttatagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 11067452  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    ||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  11067451 gtaggttgtagttatgggaatttgggaattagg-ttttgatgtagtaattggttgttaatagagtagaaaattcgttgaatttgtggagaa 11067362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 64 - 256
Target Start/End: Original strand, 12127132 - 12127323
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||| |||||| |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  12127132 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 12127231  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  12127232 gtaggttttagttatggaaatttgggaattagg-ttttgaagttgtaattggttgttaagagagtagaaaattcgttgaatttgtgtagaatt 12127323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 16999515 - 16999323
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaa--ttgtataattctgaaattgagtttagcatgttgt 165  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| |    
T  16999515 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctataagttgtataattctgaaattgagtttagcatgttat 16999416  T
Q  166 aggttgtagttatgggaattt-gggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | ||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16999415 atgttgtagttatgggaattttgggaattaggtttt-gaagttgtaatcggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 16999323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 20620337 - 20620176
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20620337 aaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattag 20620238  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20620237 g-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 20620176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 14180399 - 14180560
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  14180399 aaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattat 14180498  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14180499 g-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 14180560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 20214198 - 20214037
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  20214198 aaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaa 20214099  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20214098 g-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtacaattga 20214037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 20586403 - 20586242
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || |||    
T  20586403 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgttgtaggttgtagttatgggaattaggaaactag 20586304  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20586303 g-gtttgaagttgcaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 20586242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 100 - 258
Target Start/End: Original strand, 46386093 - 46386250
Alignment:
Q  100 taagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttt 199  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||    
T  46386093 taagggtaggactaactttctctaattctaagttgtataattctgaaattgagtttaatatgttgtaggttgtagttatgggaatttgagaattagg-tt 46386191  T
Q  200 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46386192 ttgaagttgtaattggttgttaatagagtagaaattccgttgaatttgtgtagaattga 46386250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 99 - 247
Target Start/End: Complemental strand, 10277375 - 10277228
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattagg-t 10277277  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10277276 tttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 10277228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 24269948 - 24270109
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | ||||   | || ||| |||||||||||    
T  24269948 aaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaagttgggaattag 24270047  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | ||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  24270048 g-ttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattga 24270109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 44374926 - 44374833
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttag 157  Q
    ||||||||| |||||| |||||||||||||  |||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||    
T  44374926 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtttag 44374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 44383791 - 44383698
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttag 157  Q
    ||||||||| |||||| |||||||||||||  |||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||    
T  44383791 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtttag 44383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 47974821 - 47974944
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||| ||  |||| || || ||||||||||||| ||| |||||||||||||     
T  47974821 aaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattat 47974920  T
Q  196 gtttttgaagttgtaattggttgtt 220  Q
    | ||| |||||||||||||||||||    
T  47974921 g-tttagaagttgtaattggttgtt 47974944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 14218896 - 14219000
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| |||| || |||||||||||||||| || |||||| |||||||    
T  14218896 aaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgagaattttggaatta 14218995  T
Q  195 ggttt 199  Q
    |||||    
T  14218996 ggttt 14219000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 35771442 - 35771546
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||| |||| || |||| || |||||||||||||||| ||| |||||||||||||    
T  35771442 aaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatta 35771541  T
Q  195 ggttt 199  Q
    |||||    
T  35771542 ggttt 35771546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 15095638 - 15095759
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| ||| |||||||||| | |||| ||||||||| |||| |||| || |||||||||||||||| |||||||||||||||||    
T  15095638 aaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatta 15095736  T
Q  195 ggtttttgaagttgtaattggttg 218  Q
    || ||| |||||||||||| ||||    
T  15095737 gg-tttagaagttgtaattagttg 15095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 43276713 - 43276796
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |   ||||||||||||||||    
T  43276713 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 43276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 48807326 - 48807448
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| |||| || |||| || ||||||| |||||||| ||||||||||||||||     
T  48807326 aaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttgggaatttgggaattt 48807425  T
Q  195 ggtttttgaagttgtaattggttg 218  Q
    || |   |||||||||||||||||    
T  48807426 gg-tacagaagttgtaattggttg 48807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 96 - 256
Target Start/End: Complemental strand, 33002204 - 33002053
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||  |||| |       ||||||||||| ||||||||||||||||||    
T  33002204 aaggtaagggtcggactaactttctctaattctaagttgtatgattctgaaattggatttaac-------aggttgtagtt-tgggaatttgggaattag 33002113  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    |  || |||||||||||||||||||   | |||||| |||| |||||||| ||||||||||    
T  33002112 g-gttagaagttgtaattggttgttgtaatagtagagaatctgttgaattggtgtagaatt 33002053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 96 - 195
Target Start/End: Complemental strand, 16078381 - 16078281
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| || |||| || |||| || ||||||| |||||||| |||||||||||||||||    
T  16078381 aaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaacaagttgtagtttgtagttttgggaatttgggaatta 16078282  T
Q  195 g 195  Q
    |    
T  16078281 g 16078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 12754613 - 12754716
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||||||||| ||  |||| || || |||||||||||| |||| |||||||||||||     
T  12754613 aaggtaagggtgggactaactttctctaattctaagttatatgattctgaaactggatttaacaggtggtaggttgtagtaatggaaatttgggaattat 12754712  T
Q  196 gttt 199  Q
    ||||    
T  12754713 gttt 12754716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 8135239 - 8135359
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| ||||||| ||| ||||| |||| | |||| ||||||||||||| |||| || |||||||||||||||| | |||||||| |||||||    
T  8135239 aaggtaagggtgagactaaccttcactaatcctaagt-gtatgattctgaaattgaatttaacaggttgtaggttgtagttttaggaatttgagaattag 8135337  T
Q  196 gtttttgaagttgtaattggttg 218  Q
    | ||| |||||||||||||||||    
T  8135338 g-tttagaagttgtaattggttg 8135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 225
Target Start/End: Complemental strand, 25943166 - 25943041
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||| ||||||| ||||||||||||||| |   |||||||||||||||||||| ||||||||||||| | ||||   | || |||||||| ||||||| |    
T  25943166 gtaacggtgggattaactttctctaattttgggttgtataattctgaaattgaatttagcatgttgttgtttgtgaatttgtgaatttggaaattagg-t 25943068  T
Q  199 tttgaagttgtaattggttgttaatag 225  Q
    |||||||| ||||||||||||||||||    
T  25943067 tttgaagtcgtaattggttgttaatag 25943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 4071871 - 4071767
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||||||||||||||||||||||| |  ||||| |||| ||||||  |||| || |||||||||||||||| |||| ||||| ||||||    
T  4071871 aaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgagaatta 4071772  T
Q  195 ggttt 199  Q
    |||||    
T  4071771 ggttt 4071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 19195691 - 19195611
Alignment:
Q  67 caatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||  | | ||||||||||||||||    
T  19195691 caatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 19195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 15140264 - 15140143
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||| ||||| ||||||| ||| |||||||||| | |||| ||||||||| |||| |||| || |||||||||||||||| |||||||||||||||||    
T  15140264 aaggtatgggtgagactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatta 15140166  T
Q  195 ggtttttgaagttgtaattggttg 218  Q
    || |||  ||||||||||||||||    
T  15140165 gg-tttaaaagttgtaattggttg 15140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 18074619 - 18074693
Alignment:
Q  67 caatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataatt 141  Q
    |||||||||||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||| | ||||||||    
T  18074619 caatcttgtagagtccgaccatctaatttaaggtaagagtgggattaactttctctaattctaagtggtataatt 18074693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 19283135 - 19283079
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaa 124  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  19283135 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaa 19283079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 13698639 - 13698761
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||| ||||||||||||| ||||| ||| |||  |||||||| ||||||  |||  |||||| |||||||||||| ||| |||||||||||||    
T  13698639 aaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttggaaatttgggaatta 13698738  T
Q  195 ggtttttgaagttgtaattggttg 218  Q
    ||  || |||||||||||||||||    
T  13698739 gg-gttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 13744662 - 13744728
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgt 165  Q
    |||||||||||| ||||||||||||||| ||  |||||||||||||||||| |||||||||||||||    
T  13744662 gtaagggtgggattaactttctctaattttaggttgtataattctgaaattaagtttagcatgttgt 13744728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 4690650 - 4690715
Alignment:
Q  82 cgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||   ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  4690650 cgatcatctaacctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 4690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 13132363 - 13132443
Alignment:
Q  137 taattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttg 218  Q
    ||||||||||||||| |||| || ||||||||| |||||| ||||||||||||||||||| ||| ||||||||||| |||||    
T  13132363 taattctgaaattgaatttaacaagttgtaggtcgtagttttgggaatttgggaattagg-tttagaagttgtaatcggttg 13132443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 14160825 - 14160886
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||| ||||    
T  14160825 gagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaaccttctttaat 14160886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 15624069 - 15623950
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| ||||||| |||  ||||||||| | |||| ||||||||||||| ||||  | ||||||| |||||||| |||||||||| |||||||    
T  15624069 aaggtaagggtgagactaaccttcaataattctaagt-gtatgattctgaaattgaatttaataggttgtagtttgtagttttgggaatttgagaattag 15623971  T
Q  196 gtttttgaagttgtaattggtt 217  Q
    | ||| | ||||||||||||||    
T  15623970 g-tttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 10658852 - 10658932
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagtt 176  Q
    |||||||||||||||||||| |||| ||||||||| |||||| ||||||||||||  |||| ||| ||||||| |||||||    
T  10658852 aaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacattttgtaggatgtagtt 10658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 15289156 - 15289052
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||| |||||||||||||||||| |  ||||| |||| ||||||  |||| || |||||||||||||||| || | ||||| ||||||    
T  15289156 aaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgagaatta 15289057  T
Q  195 ggttt 199  Q
    |||||    
T  15289056 ggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 58385 - 58443
Alignment:
Q  67 caatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||| |||||||||||    
T  58385 caatcttgtagattccgatcatctaatctaaggtaagggtgggactagctttctctaat 58443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 12557968 - 12557853
Alignment:
Q  100 taagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||| ||| ||||||| ||| |||||||||| | |||| ||||| ||| |||| |||| || |||||||||||||||| ||||||||||| ||||||| |    
T  12557968 taagagtgagactaaccttcactaattctaagt-gtatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttggaaattagg-t 12557871  T
Q  199 tttgaagttgtaattggt 216  Q
    || ||||||| |||||||    
T  12557870 ttagaagttgaaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 36704572 - 36704673
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgg-gaatttgggaatta 194  Q
    |||||||||||||||||||| |||| ||||| ||| |||| |||||||||||||   |||| ||||||||| | ||||||| ||| | ||||| ||||||    
T  36704572 aaggtaagggtgggactaaccttctttaattttaagttgtgtaattctgaaatttgatttaacatgttgtaagatgtagttttggaggatttgagaatta 36704671  T
Q  195 gg 196  Q
    ||    
T  36704672 gg 36704673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 11054764 - 11054642
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aatt 193  Q
    |||||||||||||||||||| |||  | ||||||| | || | ||||||||| |||| |||| || ||||||||||||| || |||||||||||| ||||    
T  11054764 aaggtaagggtgggactaaccttcaatgattctaagt-gtttgattctgaaaattgaatttaacaggttgtaggttgtaattttgggaatttgggaaatt 11054666  T
Q  194 aggtttttgaagttgtaattggttg 218  Q
    ||| || | ||||||||||||||||    
T  11054665 agggttat-aagttgtaattggttg 11054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 29052183 - 29052234
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  29052183 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29052234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 38299833 - 38299748
Alignment:
Q  64 gagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||| ||||||||||| ||  |||||||||  |||||||||||||||||| |||||||||||  |   ||||||||||||||||    
T  38299833 gagcaagcttgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 38299748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 41285043 - 41284963
Alignment:
Q  135 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggt 216  Q
    ||||||||||||||||  ||||  | ||| |||||||||||| | ||||||||||||||||| ||| |||||| ||||||||    
T  41285043 tataattctgaaattggatttaataggttataggttgtagttttaggaatttgggaattagg-tttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 13744477 - 13744540
Alignment:
Q  64 gagcaatcttgtagagtccg--atcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||| ||||||||||| |  ||||||||||  |||||||||||||||||| |||||||||||    
T  13744477 gagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 13744540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 25942401 - 25942361
Alignment:
Q  218 gttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  25942401 gttaatagagtagaaaatccattgaatttgtgtacaattga 25942361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 16250223 - 16250274
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||  | | |||||||||| |||||    
T  16250223 aaggtaagggtgggactaactttctctaataatgagttgtataattttgaaa 16250274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 16550006 - 16550057
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||| ||||||||||||||||||||||||| |  | |||||||||||    
T  16550006 aaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16550057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 16615656 - 16615605
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||| ||||||||||||||||||||||||| |  | |||||||||||    
T  16615656 aaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16615605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 18955381 - 18955330
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||| |||| |||||||||||||||||||||| |  |||||||||||||    
T  18955381 aaggtaaaggtgagactaactttctctaattctaagtgttataattctgaaa 18955330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 32160169 - 32160252
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||| |||||   |||   |||||||||||  |||||||||||||||||||||| |  | |||||||||||    
T  32160169 gagcaatcttgtagagttcgatcgattaacctaaggtaagggtaagactaactttctctaattctaagtaatttaattctgaaa 32160252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 36685187 - 36685246
Alignment:
Q  137 taattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagg 196  Q
    ||||||||||| ||  |||| || |||||||||||||||| ||| |||||||||||||||    
T  36685187 taattctgaaactggatttaacaggttgtaggttgtagttttggaaatttgggaattagg 36685246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 125
Target Start/End: Original strand, 8488095 - 8488124
Alignment:
Q  96 aaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||||||    
T  8488095 aaggtaagggtgggactaactttctctaat 8488124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 125
Target Start/End: Original strand, 8513754 - 8513783
Alignment:
Q  96 aaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||||||    
T  8513754 aaggtaagggtgggactaactttctctaat 8513783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 14156361 - 14156410
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggacta 113  Q
    |||||||||||||||  ||||| |||||||  ||||||||||||||||||    
T  14156361 gagcaatcttgtagataccgataatctaatctaaggtaagggtgggacta 14156410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 14928289 - 14928362
Alignment:
Q  95 caaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtag 167  Q
    ||||||||||||||||||||| |||  ||||||||| || | |||||||| ||||||  |||| ||||||||||    
T  14928289 caaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 14928362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 15351755 - 15351828
Alignment:
Q  95 caaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtag 167  Q
    ||||||||||||||||||||| |||  ||||||||| || | |||||||| ||||||  |||| ||||||||||    
T  15351755 caaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 15351828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 25943330 - 25943289
Alignment:
Q  84 atcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||  |||||||||||||||||| |||||||||||    
T  25943330 atcatctaatataaggtaagggtgggactagctttctctaat 25943289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 43745721 - 43745656
Alignment:
Q  82 cgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||   |||||||||||||||||| |||||||||||  | | |||||||||| |||||    
T  43745721 cgatcatctaacctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaa 43745656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 32302279 - 32302177
Alignment:
Q  95 caaggtaagggtgggactaactttctctaattctaaattgtataattctg--aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaat 192  Q
    ||||||||||||||||||| | |||  ||||||||| |  | ||||||||  ||||||  |||| ||||||||||||| ||||| || | ||||||||||    
T  32302279 caaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaat 32302181  T
Q  193 tagg 196  Q
    ||||    
T  32302180 tagg 32302177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 175; Significance: 3e-94; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 7828055 - 7827862
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7828055 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 7827956  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7827955 gtaggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatcggttgaatttgtgtagaattga 7827862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 19655200 - 19655393
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  19655200 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 19655299  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19655300 gtaggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattga 19655393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 23150256 - 23150449
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23150256 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 23150355  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  23150356 gtaggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtataaaatttgttgaatttgtgtagaattga 23150449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 64 - 254
Target Start/End: Original strand, 27125446 - 27125635
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||    
T  27125446 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataagtctaaaattgagattagcatgtt 27125545  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  27125546 gtaggttgtagttatgggaatttgggacttagg-ttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtatagaa 27125635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 67 - 254
Target Start/End: Complemental strand, 18703648 - 18703458
Alignment:
Q  67 caatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgta 166  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  18703648 caatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagaatgttgta 18703549  T
Q  167 ggttgtagttatgggaatttgggaattaggtttttgaagttg----taattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    |||||||||||||||||||||||||||| | |||||||||||    |||||||||||||||||||||||||||||||||||||||| |||||    
T  18703548 ggttgtagttatgggaatttgggaatta-gattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgtatagaa 18703458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 67 - 254
Target Start/End: Complemental strand, 18709583 - 18709393
Alignment:
Q  67 caatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgta 166  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  18709583 caatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagaatgttgta 18709484  T
Q  167 ggttgtagttatgggaatttgggaattaggtttttgaagttg----taattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    |||||||||||||||||||||||||||| | |||||||||||    |||||||||||||||||||||||||||||||||||||||| |||||    
T  18709483 ggttgtagttatgggaatttgggaatta-gattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgtatagaa 18709393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 15890713 - 15890874
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||  ||||||||||||||    
T  15890713 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttttgttaatttgggaattag 15890812  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15890813 g-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 15890874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 96 - 246
Target Start/End: Original strand, 27329982 - 27330131
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  27329982 aaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaattag 27330081  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 246  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27330082 g-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 96 - 246
Target Start/End: Original strand, 27390722 - 27390871
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  27390722 aaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaattag 27390821  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 246  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27390822 g-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27390871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 96 - 195
Target Start/End: Complemental strand, 24267900 - 24267801
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattag 24267801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 257
Target Start/End: Complemental strand, 19235170 - 19235015
Alignment:
Q  100 taagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttt 199  Q
    ||||||||||| ||||||||||||||| ||  |||||||||||||||||||| ||||| ||||||| | ||||   | || ||||||||| |||||| ||    
T  19235170 taagggtgggattaactttctctaattttaggttgtataattctgaaattgattttaggatgttgttgtttgtgaatttgtgaatttggg-attagg-tt 19235073  T
Q  200 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 257  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||| ||||||| |||||    
T  19235072 ttgaagtcgtaattggttgttaataaagtagaaaatccattgaacttgtgtacaattg 19235015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 98 - 220
Target Start/End: Complemental strand, 18585854 - 18585733
Alignment:
Q  98 ggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 197  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||| |||||||||     
T  18585854 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattagg- 18585756  T
Q  198 ttttgaagttgtaattggttgtt 220  Q
    ||| |||||||||||||||||||    
T  18585755 tttagaagttgtaattggttgtt 18585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 18928732 - 18928614
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||| ||||||||||||||||||||||| | ||||||||||| ||||||| |||| || ||||||||||| |||| ||||||||||| |||||    
T  18928732 aaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatta 18928633  T
Q  195 ggtttttgaagttgtaattg 214  Q
    || ||| |||||||||||||    
T  18928632 gg-tttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 96 - 256
Target Start/End: Complemental strand, 28948626 - 28948466
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgta-gttatgggaatttgggaatta 194  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||| ||  |||| || || ||| |||||| ||| | | |||||||||||||    
T  28948626 aaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaagtggtaagttgtaggttttagaaatttgggaatta 28948527  T
Q  195 ggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    || ||| |||||||||||||||||||   | ||||||||||  |||||||| ||||||||||    
T  28948526 gg-tttagaagttgtaattggttgttttaatagtagaaaatatgttgaattggtgtagaatt 28948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 96 - 257
Target Start/End: Original strand, 30673403 - 30673556
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||| ||||||||||||||| ||  |||||||||| ||||||||||||||||||| ||| | ||||        |||||| ||||||||    
T  30673403 aaggtaagggtgggattaactttctctaattttaggttgtataattttgaaattgagtttagcatgatgttgtttgt--------gaattttggaattag 30673494  T
Q  196 gtttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 257  Q
    | ||||||| | |||| |||||||||||||||||||||||| | ||||||||||||| |||||    
T  30673495 g-ttttgaattagtaatttggttgttaatagagtagaaaattcattgaatttgtgtacaattg 30673556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 19401145 - 19401028
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| ||| |||||||||| | |||| ||||||||| |||| |||| || |||||||||||||||| |||||||||| ||||||    
T  19401145 aaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaatta 19401047  T
Q  195 ggtttttgaagttgtaattg 214  Q
    ||||| | ||||||||||||    
T  19401046 ggtttat-aagttgtaattg 19401028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 19167926 - 19167998
Alignment:
Q  184 tttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 257  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  19167926 tttgggaattaggtttt-gaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattg 19167998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 31731905 - 31732009
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||||||||| |||||||| |  |||||||||| ||||||  |||  || |||||||||||||||| |||| ||||| ||||||    
T  31731905 aaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttggggatttgagaatta 31732004  T
Q  195 ggttt 199  Q
    |||||    
T  31732005 ggttt 31732009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 27572123 - 27572198
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcat-gttgtaggtt 170  Q
    |||||||||||| |||||||||||||||||||||| | |||||||||||||||||| |||| ||| ||||||||||    
T  27572123 aaggtaagggtgagactaactttctctaattctaagtcgtataattctgaaattgaatttaacatggttgtaggtt 27572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 17318135 - 17318184
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggacta 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17318135 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta 17318184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 15998940 - 15998880
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagttta 156  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||  |||||||    
T  15998940 aaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagttta 15998880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 20410481 - 20410564
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| | || |||||||||||  |   ||||||||||||||||    
T  20410481 gagcaatcttgtagagtgcgatcatctaatttaaggtaagggtggaaatagctttctctaataatgggttgtataattctgaaa 20410564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 24550169 - 24550271
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||||||||||  |||| ||||| ||| |||| ||||||||||||||  |||| ||||||||||| ||||||| |||  ||||  |||||||    
T  24550169 aaggtaagggtgggactaaacttctttaattgtaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagttttggagatttaagaattag 24550268  T
Q  196 gtt 198  Q
    |||    
T  24550269 gtt 24550271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 23501723 - 23501601
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtag-ttatgggaatttgggaatt 193  Q
    |||||||||||| ||||||| |||  |||||||||| ||| |||||||| ||| ||| |||| || |||||||||||||| || ||| ||||||||||||    
T  23501723 aaggtaagggtgagactaaccttcaataattctaaa-tgtttaattctgaaaactgaatttaacaagttgtaggttgtagtttttggaaatttgggaatt 23501625  T
Q  194 aggtttttgaagttgtaattggttg 218  Q
    ||| ||| |||||||||||| ||||    
T  23501624 agg-tttagaagttgtaatttgttg 23501601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 12041621 - 12041672
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||||||||||    
T  12041621 aaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaa 12041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 19167854 - 19167923
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgt 165  Q
    ||||||||||||| | ||||||| ||||||  ||  |||||||||||||| |||||||||||||||||||    
T  19167854 aaggtaagggtggaattaactttgtctaatattaggttgtataattctgatattgagtttagcatgttgt 19167923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 19825455 - 19825516
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||| |||||| |||||||||||||  |||||||||||| ||||| |||||||||||    
T  19825455 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagactagctttctctaat 19825516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 23431420 - 23431477
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||| |||| ||||    
T  23431420 aatcttgtagagtccgatcatctaatctaaggtaagcgtgggactaaccttctttaat 23431477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 25922084 - 25922033
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaac 115  Q
    ||||||||| |||||| |||||||||||||  ||||||||||||||||||||    
T  25922084 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaac 25922033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 29625231 - 29625191
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataa 139  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  29625231 gtaagggtgggactaactttctctaattctacgttgtataa 29625191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 15173454 - 15173505
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||| ||||||||||||||||||||||||||| |  | |||||||||||    
T  15173454 aaggtaatggtgggactaactttctctaattctaagtattttaattctgaaa 15173505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 18259262 - 18259328
Alignment:
Q  185 ttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 251  Q
    ||||||||||||||||   | |||||||| ||||||||| || |||||||||| | |||||||||||    
T  18259262 ttgggaattaggttttgagaattgtaattagttgttaattgaatagaaaatccatagaatttgtgta 18259328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 19772666 - 19772767
Alignment:
Q  95 caaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 193  Q
    ||||||||||||||||||| | |||  ||||||||| |  | |||||||| ||||||  |||| ||||||||||||| ||||| || | |||||||||||    
T  19772666 caaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaatt 19772764  T
Q  194 agg 196  Q
    |||    
T  19772765 agg 19772767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 10446280 - 10446239
Alignment:
Q  84 atcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||  |||||||||||||||||| |||||||||||    
T  10446280 atcatctaatctaaggtaagggtgggactagctttctctaat 10446239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 175; Significance: 3e-94; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 25091736 - 25091543
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25091736 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 25091637  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25091636 gtaggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 25091543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 67 - 258
Target Start/End: Original strand, 53630446 - 53630636
Alignment:
Q  67 caatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgta 166  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53630446 caatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgta 53630545  T
Q  167 ggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  53630546 ggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 53630636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 10356405 - 10356598
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||| ||||| | ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10356405 gagcaatcttgtagagttcgatcttttaatttaaggtaaggttgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 10356504  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10356505 gtaggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggtagttaatagagtagaaaatccgttgaatttgtgtagaattga 10356598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 73 - 258
Target Start/End: Complemental strand, 11426017 - 11425833
Alignment:
Q  73 tgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgt 172  Q
    ||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11426017 tgtagagaccgatcatcatatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgt 11425918  T
Q  173 agttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11425917 agttatgggaatttgggaattagg-ttttgaaattgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 11425833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 42875880 - 42875687
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||| |||||||||| ||| |||||||| ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  42875880 gagcaattttgtagagtctgattatctaatttaaggtaagggtgggactaactttatataattctaagttgtataattctgaaattgagtttagcatgtt 42875781  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42875780 gtaggttgtagttatgggaatttgggaaatagg-ttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtagaattga 42875687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 74 - 258
Target Start/End: Complemental strand, 16998598 - 16998415
Alignment:
Q  74 gtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgta 173  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  16998598 gtagagtccgatcatctaatttaaggtaagagtgagactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgta 16998499  T
Q  174 gttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  16998498 gttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagtattga 16998415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 19610403 - 19610214
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    ||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  19610403 aatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgtag 19610304  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||| |||||| | |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19610303 gttgtagttatgggaatttgagaattaag-ttttgacgttgtaattggttgttaatagagtagaaaatccgttaaatttgtgtagaattga 19610214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 15115273 - 15115112
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15115273 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta- 15115175  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
     |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15115174 ttttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattga 15115112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 37019721 - 37019561
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  37019721 aaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgagaattag 37019622  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 257  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37019621 g-ttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattg 37019561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 6633541 - 6633688
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattagg-t 6633639  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6633640 tttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 6633688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 46001535 - 46001682
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |    
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattagg-t 46001633  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46001634 tttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 46001682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 9924205 - 9924085
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| |||| || ||||||||||| |||| ||||||||||| |||||    
T  9924205 aaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatta 9924106  T
Q  195 ggtttttgaagttgtaattggt 216  Q
    || ||| |||||||||||||||    
T  9924105 gg-tttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 14549811 - 14549695
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| |||||||||||||||||||||| ||||||  |||||||| ||  |||| || || ||||||||||||| ||| ||||||||||||||    
T  14549811 aaggtaagggtgagactaactttctctaattctaagttgtatgtttctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattag 14549712  T
Q  196 gtttttgaagttgtaatt 213  Q
    | ||| ||||||||||||    
T  14549711 g-tttagaagttgtaatt 14549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 10694214 - 10694297
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||| |  | |||||||||||    
T  10694214 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaa 10694297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 10907980 - 10908063
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||| |  | |||||||||||    
T  10907980 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaa 10908063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 12424259 - 12424342
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||  |   ||||||||||||||||    
T  12424259 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 12424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 19434560 - 19434663
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||  |||| || || ||||||||||||| | | |||||||||||||     
T  19434560 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaattaa 19434659  T
Q  196 gttt 199  Q
    ||||    
T  19434660 gttt 19434663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 218
Target Start/End: Original strand, 9870449 - 9870568
Alignment:
Q  100 taagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggg-aattaggt 197  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||| ||||||  |||  |||| |||||||||||||| |||||||||||| |||||||     
T  9870449 taagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttgggaatttgggaaattagg- 9870547  T
Q  198 ttttgaagttgtaattggttg 218  Q
     || |||||||||||||||||    
T  9870548 gttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 11478654 - 11478758
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||| ||||||||| |||||||||||| | ||||||||||| ||||||| |||| || ||||||| ||| |||| ||||||||||| |||||    
T  11478654 aaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagattgaagttttgggaatttggaaatta 11478753  T
Q  195 ggttt 199  Q
    |||||    
T  11478754 ggttt 11478758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 15613141 - 15613061
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagtt 176  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||  |||| ||||||||||| |||||||    
T  15613141 aaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgtaggatgtagtt 15613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 21247 - 21144
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||| || ||||||| |||| ||||||||| |||||||||||||| |||||| |||| ||||||||||||||||||| || | ||||| ||||||    
T  21247 aaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatta 21148  T
Q  195 ggtt 198  Q
    ||||    
T  21147 ggtt 21144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 51993612 - 51993532
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagtt 176  Q
    |||||||||||||||||||| |||| ||||||||| |||| ||||||||||||||  |||| ||||||||||| |||||||    
T  51993612 aaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 51993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 25513934 - 25513851
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||||||||| |||||||||||  ||||||| |||||||||| |||||||||||  | | ||||||||||||||||    
T  25513934 gagcaatcttgtagagtctgatcatctaatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaa 25513851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 26921708 - 26921774
Alignment:
Q  182 aatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 249  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  26921708 aatttgggaattaggtttt-gaagtcgtaattggttgttaatagagtagaaaatccaatgaatttgtg 26921774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 19022427 - 19022366
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  19022427 gagcaatcttgtagagtccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 9639089 - 9639010
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||||||||| |||||||  |||||||||||||||||| |||||||||||  | | |||| |||||||||||    
T  9639089 aatcttgtagagtccgataatctaatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaa 9639010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 33186986 - 33186903
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||| ||||| |||||||||||  |   ||||||||||||||||    
T  33186986 gagcaattttgtagagtccgatcatctaatttaaggtaggggtgagactagctttctctaataatgggttgtataattctgaaa 33186903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 2424374 - 2424439
Alignment:
Q  82 cgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||   |||||||||||| |||||||||||||||||||||| |||||||||| |||||    
T  2424374 cgatcatctaacctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaa 2424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 40230389 - 40230328
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||| | ||||||||||  ||||||||||||||||||||||||| ||||    
T  40230389 gagcaatcttgtagagttcaatcatctaatctaaggtaagggtgggactaactttctttaat 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 35811377 - 35811428
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| |||||    
T  35811377 aaggtaagggtgggactaactttctctaattctaagtggtataattttgaaa 35811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 14187009 - 14186955
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattga 151  Q
    ||||||||||||||| ||||||||||||||||| || ||||| |||||||||||||    
T  14187009 aaggtaagggtgggagtaactttctctaattct-aagtgtatgattctgaaattga 14186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 15009014 - 15008963
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  15009014 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 15008963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 21062692 - 21062593
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||||||||||||||||||||||| |  ||||| | || ||||||  |||| || || ||||||||||||| || | ||||| ||||||    
T  21062692 aaggtaagggtgggactaactttctctaattctaagtgttataactatgaaaattggatttaacaagtggtaggttgtagttttgaggatttgagaatta 21062593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 33243267 - 33243324
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||| ||||||||||  |||||||||||| ||||||| |||| ||||    
T  33243267 aatcttgtagagtcccatcatctaatctaaggtaagggtgagactaacattctttaat 33243324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 16296989 - 16296938
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||||||||| |||||||||||  | | ||||||||||||||||    
T  16296989 aaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 16296938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 40620583 - 40620532
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||| ||||||||||||||||||| |  | |||||||||||    
T  40620583 aaggtaagggtgggaataactttctctaattctaagtattttaattctgaaa 40620532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 10273468 - 10273405
Alignment:
Q  64 gagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||| ||||||||||| ||  || ||||||  |||||||||||||||||| |||||||||||    
T  10273468 gagcaagcttgtagagtctgaaatcgtctaatctaaggtaagggtgggactagctttctctaat 10273405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 175; Significance: 3e-94; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 19676794 - 19676601
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19676794 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 19676695  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19676694 gtaggttgtagttatgagaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 19676601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 66 - 258
Target Start/End: Original strand, 21046020 - 21046211
Alignment:
Q  66 gcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgt 165  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21046020 gcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 21046119  T
Q  166 aggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21046120 aggttgtagttatgggaatttgggaattaag-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 21046211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 68 - 254
Target Start/End: Original strand, 16058287 - 16058471
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16058287 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 16058386  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16058387 gttgtagttatggaaatttgggaattagg--tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 16058471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 20633600 - 20633796
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  20633600 gagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaacttgctctaattctaagttgtataattctgaaattgagtttagcatgtt 20633699  T
Q  164 gtaggttgtag---ttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||| |||   |||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||    
T  20633700 gtaggttatagttattatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagaataaaaaataagttgaatttgtgtagaattga 20633796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 42913100 - 42912939
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  42913100 aaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttgtgggaatttaggaattag 42913001  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42913000 g-ttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattga 42912939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 13302953 - 13302849
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| |||| || |||||||||||||||| |||||||||||||||||    
T  13302953 aaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatta 13302854  T
Q  195 ggttt 199  Q
    |||||    
T  13302853 ggttt 13302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 96 - 256
Target Start/End: Complemental strand, 51324555 - 51324396
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| ||||||||||| |||||||||| |||||| ||||||||| ||  |||| || || ||||||||||||| |||||| |||||||||||    
T  51324555 aaggtaagggtgagactaactttccctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttgggaaattgggaattag 51324456  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    | |||  ||||||||||||||||||   | |||||||||||  ||||||| ||||||||||    
T  51324455 g-tttaaaagttgtaattggttgttttaatagtagaaaatctattgaattggtgtagaatt 51324396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 24723352 - 24723475
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| |||| || || |||| |||||||| ||| |||||| ||||||     
T  24723352 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactgaatttaacaggtggtagattgtagttttggaaatttgagaattat 24723451  T
Q  196 gtttttgaagttgtaattggttgtt 220  Q
    | ||| |||||||||||||||||||    
T  24723452 g-tttagaagttgtaattggttgtt 24723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 21168984 - 21168825
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||| | ||||||||||||||| ||  |||||||||||| ||||||||||||||||||||| | ||||   | || |||||||||||| ||    
T  21168984 aaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgggaataag 21168885  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 257  Q
    ||||| ||| | ||  ||| || ||||||||||||||||||| ||||||||||||| |||||    
T  21168884 gtttt-gaattagtttttgttt-ttaatagagtagaaaatccattgaatttgtgtacaattg 21168825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 7051923 - 7052046
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||  |||| || || |||| || ||||| | | ||||||||||||||    
T  7051923 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattttagttttagaaatttgggaattag 7052022  T
Q  196 gtttttgaagttgtaattggttgtt 220  Q
    | ||| ||| |||||||||||||||    
T  7052023 g-tttagaaattgtaattggttgtt 7052046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 42697835 - 42697732
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||| ||||||| |||| ||||||||| |||||||||||||| |||||  |||| ||||||||||||||||||| || | ||||| ||||||    
T  42697835 aaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaatta 42697736  T
Q  195 ggtt 198  Q
    ||||    
T  42697735 ggtt 42697732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 196
Target Start/End: Complemental strand, 22350795 - 22350667
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgt 162  Q
    ||||||||||||||||||||||||    ||  |||||||||||||||||||| |||  ||||||| | |  ||| ||||||||| |||| |||| || ||    
T  22350795 gagcaatcttgtagagtccgatca----atctaaggtaagggtgggactaaccttcaataattctgagta-tatgattctgaaaattgaatttaacaagt 22350701  T
Q  163 tgtaggttgtagttatgggaatttgggaattagg 196  Q
    |||||||||||||| |||||||||||||||||||    
T  22350700 tgtaggttgtagttttgggaatttgggaattagg 22350667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 7320595 - 7320716
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| | | |||||||||| | |||| ||||||||| |||| |||| || ||||||| |||||||| |||||||||||||||||    
T  7320595 aaggtaagggtgggactaacctacactaattctaagt-gtattattctgaaaattgaatttaacaggttgtagattgtagttttgggaatttgggaatta 7320693  T
Q  195 ggtttttgaagttgtaattggttg 218  Q
     | ||| || ||||||||||||||    
T  7320694 tg-tttagatgttgtaattggttg 7320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 4595854 - 4595944
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatt 185  Q
    |||||||||||| ||||||||||||||||||||||   ||||||||||| |||| || |||| || |||||||||||||||| ||||||||    
T  4595854 aaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttgggaatt 4595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 20588721 - 20588660
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| || |||||||||||    
T  20588721 gagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20588660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 20593259 - 20593198
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| || |||||||||||    
T  20593259 gagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 21239050 - 21239130
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagtt 176  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||  |||| || || |||||||||||||    
T  21239050 aaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtt 21239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 28476703 - 28476786
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||| |||||||| |||||||||  ||||||||||||||||||  ||||||||||  | | ||||||||||||||||    
T  28476703 gagcaatcttgcagagtccggtcatctaatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaa 28476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 51336530 - 51336479
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  51336530 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaa 51336479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 41225423 - 41225484
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||||||||| |||| ||||||||||||| |||||||||||||||||||| |||| ||||    
T  41225423 gagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41225484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 41226676 - 41226737
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||||||||| |||| ||||||||||||| |||||||||||||||||||| |||| ||||    
T  41226676 gagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41226737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 12327744 - 12327795
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  12327744 aaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaa 12327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 12710950 - 12710867
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||| ||||||||||  ||||||| | |||||||| |||||||||||  |   ||||||||||||||||    
T  12710950 gagcaatcttgtagagtcccatcatctaatctaaggtaaagatgggactagctttctctaatattgggttgtataattctgaaa 12710867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 8306689 - 8306628
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||| |||||| |||||||||||||  |||||||| ||||||||| |||||||||||    
T  8306689 gagcaatctcgtagagaccgatcatctaatctaaggtaagagtgggactagctttctctaat 8306628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 44822022 - 44822145
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||| ||||||||||| |||  ||||||| | || ||| ||| ||||| |||  |||| || || ||||||||||||| ||| |||||||||||||    
T  44822022 aaggtaagagtgggactaaccttcaataattctga-ttatatgattatgaaaattggatttaacaggtggtaggttgtagttctggaaatttgggaatta 44822120  T
Q  195 ggtttttgaagttgtaattggttgtt 220  Q
    || ||| |||||||||||||||||||    
T  44822121 gg-tttagaagttgtaattggttgtt 44822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 29763633 - 29763684
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  29763633 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29763684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 45755571 - 45755468
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaat-tgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||| ||||||| |||| ||||| ||| || ||| |||||||||  ||  |||| || |||||||||||||||| || ||||||| ||||||    
T  45755571 aaggtaagggtgagactaaccttctttaattataagttatatgattctgaaaagtggatttaacaagttgtaggttgtagttttgagaatttgagaatta 45755472  T
Q  195 ggtt 198  Q
    ||||    
T  45755471 ggtt 45755468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 46197746 - 46197797
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  46197746 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 46197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 45499439 - 45499374
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgt 165  Q
    |||||||||| | ||||| ||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  45499439 gtaagggtgg-attaactctctctaattttaggttgtataattctgaaattgagtttagcatattgt 45499374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 50001527 - 50001476
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||| ||||||||| |  | |||||||||||    
T  50001527 aaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 50001476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 11946453 - 11946391
Alignment:
Q  135 tataattctgaaattgagtttagcatgttgtaggttgtagttatg-ggaatttgggaattagg 196  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| || ||| |||||||||||||    
T  11946453 tataattctgaaattggatttaacatgttgtaggttatagttttgaggattttgggaattagg 11946391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 125
Target Start/End: Original strand, 22145667 - 22145696
Alignment:
Q  96 aaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||||||    
T  22145667 aaggtaagggtgggactaactttctctaat 22145696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 14801384 - 14801337
Alignment:
Q  153 tttagcatgttgtaggttgtagttatgggaatttggg-aattaggtttt 200  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  14801384 tttagcatgttgtaggtt-tagttttgggaatttgggaaattaggtttt 14801337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 14810258 - 14810211
Alignment:
Q  153 tttagcatgttgtaggttgtagttatgggaatttggg-aattaggtttt 200  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  14810258 tttagcatgttgtaggtt-tagttttgggaatttgggaaattaggtttt 14810211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 64 - 254
Target Start/End: Original strand, 4683 - 4872
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4683 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtcggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 4782  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4783 gtaggtcgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 4872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 17045045 - 17044856
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17045045 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 17044946  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  17044945 gttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattga 17044856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 64 - 249
Target Start/End: Original strand, 22306552 - 22306736
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22306552 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 22306651  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 249  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22306652 gtaggttgtagttatgggaatttgtgaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 22306736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 17047205 - 17047016
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17047205 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 17047106  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||  |||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17047105 gttgtagttatttgaatttgggaattaag-ttttgaagttgtaattggttgttaatagagtaaaaaatccgttgaatttgtgtagaattga 17047016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 49900809 - 49900620
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    ||||| |||||| |||||||||||||  ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49900809 aatctcgtagagaccgatcatctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 49900710  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49900709 gttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 49900620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 68 - 258
Target Start/End: Original strand, 17518846 - 17519035
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    |||||| |||||||||||||||||||  |||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||    
T  17518846 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17518945  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17518946 gttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 17519035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 68 - 258
Target Start/End: Original strand, 17533708 - 17533897
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    |||||| |||||||||||||||||||  |||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||    
T  17533708 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17533807  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17533808 gttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 17533897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 40808047 - 40807886
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40808047 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 40807948  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807947 g-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 40807886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 41172340 - 41172533
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| || ||| |||||||| |||||||||||||||||||||||    
T  41172340 gagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctacttataagttgtataactctgaaattgagtttagcatgtt 41172439  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  41172440 gtaggttgtagttatgggaattagggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattga 41172533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 64 - 254
Target Start/End: Complemental strand, 11259514 - 11259325
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  11259514 gagcaatcttgtagagtccgattatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaatttagcatgtt 11259415  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    |||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  11259414 gtagattgtagttatgagaatttgggaattagg-ttttgaagttgtaattgattgttaataaagtagaaaatccgttgaatttgtgtagaa 11259325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 17694150 - 17693957
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  17694150 gagcaatcttgtagagtccgatcatctaatttaatgtaagggtgagactaactttctctaattctaagttgtataattctaaaattgagtttagcatgtt 17694051  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||| |||||| |||||| | ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  17694050 gtaggttgtagttatggaaatttgtgaatta-gattttgaagttgtaattgatcgttaatagagtagaaaatccgttgaatttgtgtagaattga 17693957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 17539185 - 17538996
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    ||||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||| ||||||||||    
T  17539185 aatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttatctaattctaagttgtataattctgaaattgattttatcatgttgtag 17539086  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17539085 gttgtagttatgggaatttggaaattagg-ttttgaagatgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattga 17538996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 35354685 - 35354492
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  35354685 gagcaatcttgtagagtccaatcatctaatttaagctaagtgtgggactaactttctctaattttaagttgtataattctgaaattgagtttagcatgtt 35354586  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    || |||||||||||||||||||||| ||||||| ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  35354585 gttggttgtagttatgggaatttggaaattagg-ttttgaagttgtaattgattgttggtagagtagaaaatccgttgaatttgtgtagaattga 35354492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 40812884 - 40812723
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40812884 aaggtaagggtgggactaactttctctaattctaagttgcataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 40812785  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40812784 g-ttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtagaattga 40812723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 44274469 - 44274308
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  44274469 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta- 44274371  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
      |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  44274370 tattttgaagttgtaattggttgttaatagagtagaaaattcattgaatttgtgtagaattga 44274308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 68 - 245
Target Start/End: Complemental strand, 14508926 - 14508749
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    ||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  14508926 aatcttgtagagtccgatcatctaatttatggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaggttagcatgttgtag 14508827  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 245  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||  | |||||||| |||| | ||||||    
T  14508826 gttgtagttatgggaattttggaattaggttttggaagttgtaattggttgtagaaagagtagataatctgatgaatt 14508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 50348041 - 50348188
Alignment:
Q  110 actaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttttgaagttgt 209  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50348041 actaactttctctaattctaagttgtataattttaaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagg-ttttgaagttgt 50348139  T
Q  210 aattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50348140 aattggttgttaatagagtagaaaatctgttgaatttgtgtagaattga 50348188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 10563759 - 10563599
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  10563759 aaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgttgtagtttgtagttatggaaatttgggaattag 10563660  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  10563659 g-ttttgaagttgtaattggttgttaatagagtagaaaagccgttgaatttg-gtagaattga 10563599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 68 - 258
Target Start/End: Original strand, 15931481 - 15931669
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    ||||||||||||||||||||| ||||| ||||||| |||| |||||||||||||||||||||| | ||||||||||||||| |||||||||||||| |||    
T  15931481 aatcttgtagagtccgatcatttaatttaaggtaaaggtgagactaactttctctaattctaagt-gtataattctgaaatagagtttagcatgttttag 15931579  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||| |||||| ||||||||| ||| ||||||||||||  || ||||||||||||||||| ||||||||||||||||||||||    
T  15931580 gttgtagttatgagaattttggaattagg-tttcgaagttgtaattaattattaatagagtagaaaattcgttgaatttgtgtagaattga 15931669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 99 - 247
Target Start/End: Complemental strand, 10311575 - 10311428
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||| |    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattagg-t 10311477  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10311476 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 10311428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 17541517 - 17541423
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagc 158  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17541517 gagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagc 17541423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 96 - 256
Target Start/End: Original strand, 19568209 - 19568368
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||| |   |||| || |||||||||||||||| ||||||||||||||||||    
T  19568209 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactagatttaacaggttgtaggttgtagttttgggaatttgggaattag 19568308  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    |  || ||||||||||||||| |||   | |||||| ||||||||||||  ||||||||||    
T  19568309 g-gttagaagttgtaattggtagttgtaatagtagagaatccgttgaatcggtgtagaatt 19568368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 35064566 - 35064658
Alignment:
Q  120 tctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaatt 213  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  35064566 tctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattagg-ttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 80 - 218
Target Start/End: Complemental strand, 11563792 - 11563654
Alignment:
Q  80 tccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttat 178  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||||||| | ||||||||||| ||||  | |||| || |||||||||||||||| |    
T  11563792 tccgatcatctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagtttt 11563693  T
Q  179 gggaatttgggaattaggtttttgaagttgtaattggttg 218  Q
    |||||||||||||||||| |||  ||||||||||||||||    
T  11563692 gggaatttgggaattagg-tttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 33565138 - 33565018
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| |||| || ||||||||||| |||| ||||||||||| |||||    
T  33565138 aaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatta 33565039  T
Q  195 ggtttttgaagttgtaattggt 216  Q
    || ||| |||||||||||||||    
T  33565038 gg-tttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 256
Target Start/End: Original strand, 9510917 - 9511076
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||  ||||||||||||||||||||| |||||| ||||||||| ||  |||| || || |||| |||||||| |||||||||| |||||||    
T  9510917 aaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaattag 9511016  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    | ||| |||||||||||||||||||   | ||||||||||| ||||| || || |||||||    
T  9511017 g-tttagaagttgtaattggttgttttaatagtagaaaatctgttgatttcgtttagaatt 9511076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 256
Target Start/End: Original strand, 9518892 - 9519051
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||  ||||||||||||||||||||| |||||| ||||||||| ||  |||| || || |||| |||||||| |||||||||| |||||||    
T  9518892 aaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaattag 9518991  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    | ||| |||||||||||||||||||   | ||||||||||| ||||| || || |||||||    
T  9518992 g-tttagaagttgtaattggttgttttaatagtagaaaatctgttgatttcgtttagaatt 9519051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 16050978 - 16050875
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||| || |||||| ||||||||| || | ||||| |||||||    
T  16050978 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgtatgttgtagttttgaggatttgagaattag 16050879  T
Q  196 gttt 199  Q
    ||||    
T  16050878 gttt 16050875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 42323972 - 42324094
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| || | ||||| ||| ||||||||||||| ||||||| |||  ||||||||||||||||||| ||||||||||| |||||    
T  42323972 aaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttgggaatttggaaatta 42324071  T
Q  195 ggtttttgaagttgtaattggttg 218  Q
    ||  || |||||||||||||||||    
T  42324072 gg-gttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 35960929 - 35961049
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||| ||||||||||||||||||  | ||||||||||| ||||||| |||| || ||||||||||| |||| ||| ||||||| |||||    
T  35960929 aaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttggaaatttggaaatta 35961028  T
Q  195 ggtttttgaagttgtaattggt 216  Q
    || ||| |||||||||||||||    
T  35961029 gg-tttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 35064682 - 35064742
Alignment:
Q  198 ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35064682 ttttgaagttgtaattggttgttaatatagtagaaaatccgttgaatttgtgtagaattga 35064742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 5200277 - 5200332
Alignment:
Q  203 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5200277 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 5200332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 15566823 - 15566744
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||| |||||||||||| ||||  || |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15566823 aatcttgttgagtccgatcatgtaatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 13185946 - 13185842
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattct-gaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||||||||||||||||||| ||| |  |||||||||  |||| || |||| || |||||||||||||||| ||| |||||||||||||    
T  13185946 aaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatta 13185847  T
Q  195 ggttt 199  Q
    |||||    
T  13185846 ggttt 13185842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 11885560 - 11885658
Alignment:
Q  98 ggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagg 196  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||| ||||||  |||| || |||||||||||||||| |||||||||| ||||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgagaattagg 11885658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 24177737 - 24177840
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||| ||  ||||  | || ||||||||||||| ||| |||||||||||||     
T  24177737 aaggtaagggtgggacaaactttctctaattataagttgtataattctgaaactggatttaataggtggtaggttgtagttttggaaatttgggaattat 24177836  T
Q  196 gttt 199  Q
    ||||    
T  24177837 gttt 24177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 49968860 - 49968981
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||| ||||||||||| ||| |||||||||| | |||| ||||||||| |||| |||| || ||||||| |||||||| || ||||||||||||||    
T  49968860 aaggtaagagtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaatta 49968958  T
Q  195 ggtttttgaagttgtaattggttg 218  Q
    ||||| | ||||||||||||||||    
T  49968959 ggtttat-aagttgtaattggttg 49968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 45530572 - 45530725
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgt 162  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||| ||   ||||||| || | ||| |||||| ||||||| |||| || ||    
T  45530572 gagcaatcttgtagagtccgatcatctaatttaaggtaa-gatgggactaacatttaataattct-aagtatatgattctgaaaattgaatttaacaggt 45530669  T
Q  163 tgtaggttgtagttatgggaatttg-ggaattaggtttttgaagttgtaattggttg 218  Q
    ||| |||||||||| |||||||||| | |||||||  || |||||||||||||||||    
T  45530670 tgtgggttgtagttttgggaatttgcgaaattagg-gttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 12509351 - 12509431
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagtt 176  Q
    |||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||  |||| ||||| ||||| |||||||    
T  12509351 aaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgtggtaggatgtagtt 12509431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 50347604 - 50347656
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaact 116  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  50347604 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaact 50347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 15446869 - 15446920
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  15446869 aaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15446920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 37039085 - 37039005
Alignment:
Q  112 taactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaa 191  Q
    |||| |||| ||||| ||| |||||||||||||||| |||  |||| ||||||||||||||||||| ||||||||||||||    
T  37039085 taacattctttaattataagttgtataattctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaa 37039005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 36528918 - 36528851
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||| ||||||||||||||||||| |  ||||||||||| |||| ||||| ||||||    
T  36528918 aaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggtttaacatgtt 36528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 6159484 - 6159427
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||  |||||||||||    
T  6159484 aatcttgtagagtccgatcatctaatctaaggtaagggtgagactcgctttctctaat 6159427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 14641517 - 14641578
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||| |||||| |||||||||||||  ||||||||||||||| || |||||||||||    
T  14641517 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggattagctttctctaat 14641578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 50350793 - 50350846
Alignment:
Q  72 ttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||  |||||||||||||||||||| |||| ||||    
T  50350793 ttgtagagtccgatcatctaatctaaggtaagggtgggactaaccttctttaat 50350846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 53646032 - 53646089
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||| |||| ||||    
T  53646032 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaaccttctttaat 53646089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 5200244 - 5200284
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgta 136  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  5200244 aaggtaagggtgggactaactttctctaattctaagttgta 5200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 14250085 - 14250185
Alignment:
Q  98 ggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 197  Q
    |||||| ||||||||||| |||| ||||||||| |||| ||||| | ||||||  |||| ||||||||| | ||||||| |||  ||||  |||||||||    
T  14250085 ggtaagagtgggactaaccttctttaattctaagttgtgtaattttcaaattggatttaacatgttgtaagatgtagttttggagatttaagaattaggt 14250184  T
Q  198 t 198  Q
    |    
T  14250185 t 14250185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 16979963 - 16979912
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||| ||||||||| |  | |||||||||||    
T  16979963 aaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 16979912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 17208575 - 17208524
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||||||||| |||||||||||  | | ||||||||||||||||    
T  17208575 aaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 17208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 22652824 - 22652773
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||| |||||||||||||||||||||||||| |  | |||||||||||    
T  22652824 aaggtaagagtgggactaactttctctaattctaagtaatttaattctgaaa 22652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 22758834 - 22758935
Alignment:
Q  95 caaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 193  Q
    ||||||||||||| ||||||| |||  ||||||||| |  | |||||||| ||||||  |||| ||||||||||||| ||||| || | |||||||||||    
T  22758834 caaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaatt 22758932  T
Q  194 agg 196  Q
    |||    
T  22758933 agg 22758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 3527124 - 3527187
Alignment:
Q  64 gagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||| ||||||||||||||  ||| || ||  |||||||||||||||||| |||||||||||    
T  3527124 gagcaaacttgtagagtccgaattcaacttatctaaggtaagggtgggactagctttctctaat 3527187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 12917273 - 12917336
Alignment:
Q  64 gagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||| ||||||||||||||  ||| | |||  ||| ||||||||||||||||||||||||||    
T  12917273 gagcaagcttgtagagtccgaattcaaccaatctaagataagggtgggactaactttctctaat 12917336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 2e-89; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 64 - 254
Target Start/End: Original strand, 24780809 - 24780998
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||      
T  24780809 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgaa 24780908  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24780909 gtaggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 24780998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 67 - 258
Target Start/End: Complemental strand, 9976009 - 9975819
Alignment:
Q  67 caatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgta 166  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9976009 caatcttgtagagtccgatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgta 9975910  T
Q  167 ggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  9975909 ggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagacaatccgctgaatttgtgtagaattga 9975819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 64 - 254
Target Start/End: Original strand, 5031098 - 5031287
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5031098 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 5031197  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  5031198 gtaggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtataaaattcgttgaatttgtgtagaa 5031287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 24436731 - 24436538
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  24436731 gagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaactttctcgaattctaagttgtataattctgaaattgagtttagcatgtt 24436632  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24436631 gtaggttgtagttatgggaatttggaaattagg-ttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattga 24436538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 74 - 258
Target Start/End: Complemental strand, 17307559 - 17307376
Alignment:
Q  74 gtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgta 173  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17307559 gtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgta 17307460  T
Q  174 gttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17307459 gttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 17307376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 24516237 - 24516076
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24516237 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaattag 24516138  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516137 g-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 24516076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 68 - 248
Target Start/End: Original strand, 22251421 - 22251600
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    |||||||||||||| |||||||||||| ||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22251421 aatcttgtagagtctgatcatctaatttaaggtaagggtgaaactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 22251520  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgt 248  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22251521 gttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgt 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 2523716 - 2523909
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||    
T  2523716 gagcaatcttgtaaagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattcttaaattgagtttaacatgtt 2523815  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||| |||||||||||||| |||||||||||| || |||||||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  2523816 gtaggttgtatttatgggaatttggaaattaggttttt-aaattgtaattggttattaatagagtagaaaattcgttgaatttgtgcagaattga 2523909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 96 - 254
Target Start/End: Complemental strand, 40912371 - 40912214
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40912371 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 40912272  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    | ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  40912271 g-ttttgaagttgtagttggttgttaatagagtagaaaattcgttgaatttgtgtagaa 40912214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 82 - 258
Target Start/End: Original strand, 19201187 - 19201362
Alignment:
Q  82 cgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg 181  Q
    |||||||||||   ||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  19201187 cgatcatctaacctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttatcatgttgtaggttgtagttatagg 19201286  T
Q  182 aatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  19201287 aatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggtagaattga 19201362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 99 - 247
Target Start/End: Complemental strand, 37270747 - 37270600
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| | |    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaag-t 37270649  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 247  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37270648 tttgaagttgtaatgggttgttaatagagtagaaaatccgttgaatttg 37270600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 27484514 - 27484639
Alignment:
Q  132 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtaga 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  27484514 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaag-ttttgaagttgtaattggttgttaatagagtaga 27484612  T
Q  232 aaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||||||||||    
T  27484613 aaatccgttgaatttgtgtagaattga 27484639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 36841268 - 36841154
Alignment:
Q  143 tgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttga 242  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||  |||||    
T  36841268 tgaaattgagtttaacatgttgtaggttgtagttatgggaatttagaaattaggtttt-gaagttgtaattggttgttaatagagtagaaaatatgttga 36841170  T
Q  243 atttgtgtagaattga 258  Q
    ||||||||||||||||    
T  36841169 atttgtgtagaattga 36841154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 25142255 - 25142133
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||| || |||||||||||||||| |||||||||||||||||    
T  25142255 aaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatta 25142156  T
Q  195 ggtttttgaagttgtaattggttg 218  Q
    || ||| |||||||||||||||||    
T  25142155 gg-tttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 357932 - 357809
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||  |||| || || ||||||||||||| | | ||||||||||||||    
T  357932 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaattag 357833  T
Q  196 gtttttgaagttgtaattggttgtt 220  Q
    | ||| |||||||||||||||||||    
T  357832 g-tttagaagttgtaattggttgtt 357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 1383545 - 1383667
Alignment:
Q  97 aggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagg 196  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||||||| ||  |||| || || ||||||||||||| ||| |||||||||||||||    
T  1383545 aggtaagggtgagactaactttctctaattctaagttgtatcattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattagg 1383644  T
Q  197 tttttgaagttgtaattggttgtt 220  Q
     ||| |||||||||||||||||||    
T  1383645 -tttagaagttgtaattggttgtt 1383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 195
Target Start/End: Complemental strand, 27852747 - 27852619
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgt 162  Q
    ||||| ||||||||||||||||||    ||  ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||| || ||    
T  27852747 gagcattcttgtagagtccgatca----atctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagt 27852652  T
Q  163 tgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||| ||| ||||||||||||||||||    
T  27852651 tgtaggttgttgttttgggaatttgggaattag 27852619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 22502050 - 22501897
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgta 166  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |  | ||||||||| |||||  |||| ||||||||     
T  22502050 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22501951  T
Q  167 ggttgtagttatgggaatttggg-aattaggtttttgaagttgtaattggttgtt 220  Q
    |||||||||| |  ||||||||| |||||||  || |||||||| ||||||||||    
T  22501950 ggttgtagttttatgaatttgggaaattagg-gttagaagttgtgattggttgtt 22501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 22509984 - 22509831
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgta 166  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |  | ||||||||| |||||  |||| ||||||||     
T  22509984 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22509885  T
Q  167 ggttgtagttatgggaatttggg-aattaggtttttgaagttgtaattggttgtt 220  Q
    |||||||||| |  ||||||||| |||||||  || |||||||| ||||||||||    
T  22509884 ggttgtagttttatgaatttgggaaattagg-gttagaagttgtgattggttgtt 22509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 3539888 - 3539766
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||||| |||| || |||| || |||||||||||||||| | |||||||| ||||||    
T  3539888 aaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttggaatttgagaatta 3539789  T
Q  195 ggtttttgaagttgtaattggttg 218  Q
    || ||| |||||||||||||||||    
T  3539788 gg-tttagaagttgtaattggttg 3539766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 195
Target Start/End: Complemental strand, 44072608 - 44072509
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||| ||||||||||| |||||||||| | |||| ||| ||||| |||| ||||||| |||||||||||||||| ||||||||||| |||||    
T  44072608 aaggtaagggtgagactaactttcactaattctaagt-gtatgattttgaaaattgaatttagcaagttgtaggttgtagttttgggaatttggaaatta 44072510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 25046169 - 25046066
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||||||| |||||  |||| ||||||||||| ||||||| || | ||||  ||||||    
T  25046169 aaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatttaagaatta 25046070  T
Q  195 ggtt 198  Q
    ||||    
T  25046069 ggtt 25046066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 21369376 - 21369316
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaa 124  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||    
T  21369376 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggacaagctttctctaa 21369316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 149474 - 149549
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattct 143  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||  | | ||||||||||||    
T  149474 aatcttgtagagtccgatcatctaatctaaggtaagggtggaactagctttctctaataatgagttgtataattct 149549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 5986228 - 5986125
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||| ||| |||| ||||||||| ||||||||||||| ||||||  |||| || |||||||||| ||||| || | ||||| ||||||    
T  5986228 aaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaatta 5986129  T
Q  195 ggtt 198  Q
    ||||    
T  5986128 ggtt 5986125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 14179697 - 14179758
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||||||||| |||| ||||    
T  14179697 gagcaatcttgtagagttcgatcatctaatataaggtaagggtgggactaaccttctttaat 14179758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 36841310 - 36841267
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtg 107  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  36841310 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 36841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 22260089 - 22259974
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||| ||| ||||||||||| |||||||| || || || |||||| ||||||| |||| || |||||||||||||||| | |||||||||||||||    
T  22260089 aaggtaagagtgtgactaactttcactaattct-aagtgcatgattctgaaaattgaatttaacaggttgtaggttgtagtt-taggaatttgggaatta 22259992  T
Q  195 ggtttttgaagttgtaatt 213  Q
    ||  || ||||||||||||    
T  22259991 gg-cttagaagttgtaatt 22259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 14183436 - 14183496
Alignment:
Q  65 agcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||| || | ||||||||||||||| |||||||||||||||||||| |||| ||||    
T  14183436 agcaatcttataaaatccgatcatctaatttaaggtaagggtgggactaaccttctttaat 14183496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 18390229 - 18390315
Alignment:
Q  110 actaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagg 196  Q
    ||||||||||||||||||||| |  |||||||||| |||| || |||| || | |||| ||||||||| |||||||||||||||||||    
T  18390229 actaactttctctaattctaagtgatataattctgaaaatagaatttaacaag-tgtatgttgtagttttgggaatttgggaattagg 18390315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 21080970 - 21081021
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  21080970 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 21081021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 31521252 - 31521197
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttc 119  Q
    ||||||||||||| ||||||||||||||||| | |||||||||| | |||||||||    
T  31521252 gagcaatcttgtacagtccgatcatctaatttagggtaagggtgaggctaactttc 31521197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 19358942 - 19358820
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aatt 193  Q
    |||||||||||||||||||| ||   ||||||| | |  ||| ||||||||| |||| |||| || ||||| |||||||||| |||||||||||| ||||    
T  19358942 aaggtaagggtgggactaacctttaataattctgagta-tatgattctgaaaattgaatttaacaagttgtgggttgtagttttgggaatttgggaaatt 19358844  T
Q  194 aggtttttgaagttgtaattggttg 218  Q
    |||  || |||||||||||||||||    
T  19358843 agg-gttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 20916390 - 20916326
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattct 128  Q
    ||||||||||||||||  ||||||||||||| || |||||||||| |||||| |||  |||||||    
T  20916390 gagcaatcttgtagagctcgatcatctaatttaaagtaagggtggaactaaccttcaataattct 20916326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 24884453 - 24884399
Alignment:
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgt 219  Q
    ||||||||||||| ||  ||||||||||||||| ||| ||||||||||||||||||    
T  24884453 gtaggttgtagttctgaaaatttgggaattagg-tttagaagttgtaattggttgt 24884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 25184240 - 25184189
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||| |||||||||||||||||||||| |  | |||||||||||    
T  25184240 aaggtaagggtgagactaactttctctaattctaagtattttaattctgaaa 25184189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 14694377 - 14694276
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatggga-atttgggaatt 193  Q
    |||||||||||| |||||||||||| ||||||||| |  | ||||| || ||||||  |||| |||| |||||||||||||| ||||| ||||| |||||    
T  14694377 aaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtaggttgtagtt-tgggagatttgagaatt 14694279  T
Q  194 agg 196  Q
    |||    
T  14694278 agg 14694276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 194
Target Start/End: Original strand, 18388256 - 18388289
Alignment:
Q  161 gttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||| |||||||||||||||||    
T  18388256 gttgtaggttgtagttttgggaatttgggaatta 18388289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 23801559 - 23801518
Alignment:
Q  84 atcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||  |||||||||||||||||| |||||||||||    
T  23801559 atcatctaatctaaggtaagggtgggactagctttctctaat 23801518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 12626399 - 12626447
Alignment:
Q  68 aatcttgtagagtccgatca-tctaattcaaggtaagggtgggactaac 115  Q
    |||||||||||||||||||| || |||  ||||||||||||||||||||    
T  12626399 aatcttgtagagtccgatcattcaaatgtaaggtaagggtgggactaac 12626447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 18357975 - 18358019
Alignment:
Q  103 gggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||||||||||||||||||| |  | |||||||||||    
T  18357975 gggtgggactaactttctctaattctaagtattttaattctgaaa 18358019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 21915672 - 21915624
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||| |||||||||||||||||||||| |  | |||||||||||    
T  21915672 gtaagggtgtgactaactttctctaattctaagtattttaattctgaaa 21915624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 67 - 258
Target Start/End: Original strand, 440 - 630
Alignment:
Q  67 caatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgta 166  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  440 caatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgta 539  T
Q  167 ggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  540 ggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaataagttgaatttgtgtagaattga 630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 58829 - 58636
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  58829 gagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttgtacaattctgaaattgagtttagcatgtt 58730  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  58729 gtaggttgtagttatgggaatttgagaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaattga 58636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 64 - 254
Target Start/End: Complemental strand, 19140847 - 19140659
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||    
T  19140847 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta-ctttctctaattctaagttgtataattctgaaattgagtttagcaagtt 19140749  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140748 gtaggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 19140659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 42817876 - 42818069
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42817876 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacttactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 42817975  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42817976 gtaggttgtagttatgggaatttggaaatta-gattttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtagaattga 42818069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 70 - 258
Target Start/End: Original strand, 39935982 - 39936172
Alignment:
Q  70 tcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagca---tgttgta 166  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||   |||||||    
T  39935982 tcttgtagagtccgatcatctaatttaaggtaagggtgggattaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgttgta 39936081  T
Q  167 ggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  39936082 ggttgtagttatgggaatttgcgaattagg-ttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtacaattga 39936172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 20083639 - 20083800
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20083639 aaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaattag 20083738  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20083739 g-ttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 20083800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 105 - 258
Target Start/End: Original strand, 5082222 - 5082374
Alignment:
Q  105 gtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttttgaa 204  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5082222 gtgggactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagg-ttttgaa 5082320  T
Q  205 gttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5082321 gttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 5082374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 82 - 258
Target Start/End: Complemental strand, 5761598 - 5761424
Alignment:
Q  82 cgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg 181  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||    
T  5761598 cgatcatctaacctaaggtaagggtgggactaactttctctaattctaagt-gtataattttgaaattgagtttagcatgttgtaggttgtagttatggg 5761500  T
Q  182 aatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5761499 aatttgggaattagg-ttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattga 5761424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 99 - 258
Target Start/End: Original strand, 6573060 - 6573218
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    ||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  6573060 gtaagggtgagactaactttctctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatgagg-t 6573158  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6573159 tttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 6573218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 6101754 - 6101915
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  6101754 aaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgttgtaggttgtagttatgggaatttgggaatcag 6101853  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||| ||||||||||||||||||||||||||||  |||||||||||||| |||||    
T  6101854 g-ttttgaagttataattggttgttaatagagtagaaaatctattgaatttgtgtagtattga 6101915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 99 - 247
Target Start/End: Complemental strand, 37292753 - 37292606
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattagg-t 37292655  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37292654 tttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 37292606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 99 - 247
Target Start/End: Complemental strand, 6202824 - 6202677
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||| |    
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattagg-t 6202726  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6202725 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 6202677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 148 - 258
Target Start/End: Original strand, 20178581 - 20178692
Alignment:
Q  148 ttgagtttagca-tgttgtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaatt 245  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  20178581 ttgagtttagcaatgttgtaggttgtagttatgagaatttgggaattaggtttt-gaagttgtaaattggttgttaatagagtagaaaattcgttgaatt 20178679  T
Q  246 tgtgtagaattga 258  Q
    |||||||||||||    
T  20178680 tgtgtagaattga 20178692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 96 - 250
Target Start/End: Original strand, 20397511 - 20397656
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    |||||     || || ||||||||||||    
T  20397511 aaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt----gttgt-----tgtgattttgggaattag 20397601  T
Q  196 gtttttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttgtgt 250  Q
    | |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  20397602 g-ttttaaagttgtaattaggttgttaatagagtagaaaatccattgaatttgtgt 20397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 96 - 256
Target Start/End: Original strand, 22532133 - 22532292
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||  |||| || || ||||||||||||| ||| || |||||||||||    
T  22532133 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaattag 22532232  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    | |||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||||    
T  22532233 g-tttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaatt 22532292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 96 - 256
Target Start/End: Original strand, 22536818 - 22536977
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||  |||| || || ||||||||||||| ||| || |||||||||||    
T  22536818 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaattag 22536917  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    | |||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||||    
T  22536918 g-tttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaatt 22536977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 18761531 - 18761448
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| | ||||||||||||||    
T  18761531 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgcgactaactttctctaattctaagtggtataattctgaaa 18761448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 20022025 - 20022131
Alignment:
Q  80 tccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttat 178  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||| | ||||||||||| |||| || |||| || |||||||||||||||| |    
T  20022025 tccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttt 20022124  T
Q  179 gggaatt 185  Q
    |||||||    
T  20022125 gggaatt 20022131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 256
Target Start/End: Original strand, 31722498 - 31722653
Alignment:
Q  100 taagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    ||||||||||||||||||||||||||||||| | |||||||| || |||| || |||| || |||||||||||||||| ||||||||||| |||| || |    
T  31722498 taagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttgggaatttggaaatttgg-t 31722596  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    || ||||||||||||||||| |   ||||||| ||||| ||||||||  |||||||||    
T  31722597 ttagaagttgtaattggttgatttaagagtag-aaatctgttgaattgatgtagaatt 31722653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 17906850 - 17906953
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||  |||| || |||||||||||||||  |||| ||||| |||||||    
T  17906850 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgtaggttgtagtgttggggatttgagaattag 17906949  T
Q  196 gttt 199  Q
    ||||    
T  17906950 gttt 17906953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 45469220 - 45469342
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||||| |||| || |||| || |||||||||| ||||| ||  |||||||||||||    
T  45469220 aaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttatagttttgtaaatttgggaatta 45469319  T
Q  195 ggtttttgaagttgtaattggttg 218  Q
     | ||| |||||||||||||||||    
T  45469320 tg-tttagaagttgtaattggttg 45469342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 256
Target Start/End: Original strand, 39694281 - 39694437
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    ||||||| | ||||| |||||||||||| ||| |||||| ||||||||| ||  |||| || |||||||||||||||| |||||||||||||||||||      
T  39694281 gtaagggcgtgactagctttctctaattataagttgtatgattctgaaactggatttaacaagttgtaggttgtagttttgggaatttgggaattagg-g 39694379  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    || || ||||||||| |||||    | |||||| |||| |||||||| ||||||||||    
T  39694380 ttagacgttgtaattagttgtcgtaatagtagagaatctgttgaattggtgtagaatt 39694437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 36727039 - 36727143
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||  |||| || |||||||||||||||| | || ||||| ||||||    
T  36727039 aaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttttgggatttgagaatta 36727138  T
Q  195 ggttt 199  Q
    |||||    
T  36727139 ggttt 36727143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 22317912 - 22318033
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| ||| |||||||| || ||||| |||||| ||||||| |||| || ||| ||||||||||||  |||||||||||| |||    
T  22317912 aaggtaagggtgggactaaccttcactaattct-aagtgtatgattctgaaaattgaatttaacaggttctaggttgtagtttcgggaatttgggattta 22318010  T
Q  195 ggtttttgaagttgtaattggttg 218  Q
    || ||| |||||||||||||||||    
T  22318011 gg-tttagaagttgtaattggttg 22318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 4380604 - 4380669
Alignment:
Q  82 cgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4380604 cgatcatctaacctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 4380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 23943795 - 23943866
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgt 135  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||  || |||||||||||||||| ||||    
T  23943795 gagcaatcttgtagagtccggtcatctaatttaaggtaagggtgggtatagctttctctaattctaagttgt 23943866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 22258275 - 22258353
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattc 142  Q
    |||||||||||||| |||||||||||||||| |||||||||||| ||||| |||||||||||  | | |||||||||||    
T  22258275 gagcaatcttgtagtgtccgatcatctaatttaaggtaagggtgagactagctttctctaataatgagttgtataattc 22258353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 21579175 - 21579236
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||| ||||    
T  21579175 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaaccttctttaat 21579236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 36306080 - 36306019
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||    
T  36306080 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtgagactagctttctctaat 36306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 23899988 - 23900092
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||| |||||||||||||||||||||| |  ||||| ||||| |||||| |||| || |||||||| ||||||| |||| ||||| ||| ||    
T  23899988 aaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtaggctgtagttttggggatttgagaacta 23900087  T
Q  195 ggttt 199  Q
    |||||    
T  23900088 ggttt 23900092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 18834503 - 18834444
Alignment:
Q  66 gcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||||||||| | |||||||||||||| |||||||||||||||||| |||||||||||    
T  18834503 gcaatcttgtagtgcccgatcatctaatttaaggtaagggtgggactagctttctctaat 18834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 19700212 - 19700109
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||||| | ||| |  |||| ||||||||||||||||||| || | ||||| | ||||    
T  19700212 aaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggttgtagttttgaggatttgaggatta 19700113  T
Q  195 ggtt 198  Q
    ||||    
T  19700112 ggtt 19700109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 22208352 - 22208269
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||| |||||| |||||||||||||  |||||||||||||||||| |||||||||||  |   ||||||||||||||||    
T  22208352 gagcaatctggtagagaccgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22208269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 23948314 - 23948211
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||| |||||| |||| ||||||||| |||||| |||||| ||| ||  |||| || |||||||||||||||| |||| ||||| ||||||    
T  23948314 aaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatta 23948215  T
Q  195 ggtt 198  Q
    ||||    
T  23948214 ggtt 23948211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 23419492 - 23419411
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgtaggttgtagtt 176  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||||||| |||||  |||| ||| ||||||| |||||||    
T  23419492 aaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatattgtaggatgtagtt 23419411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 29762837 - 29762898
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  |||||| |||| ||||    
T  29762837 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgaaactaaccttctttaat 29762898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 199
Target Start/End: Complemental strand, 17218749 - 17218649
Alignment:
Q  100 taagggtgggactaactttctctaattctaaattgtataattctgaaattgag-tttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||||||||||||||| |||||| |  ||||||||||||| | || |||||||  ||||||||||| ||| || | ||||| ||||||||||    
T  17218749 taagggtgggactaactttctctagttctaagtattataattctgaaaattagatttagcaatttgtaggttgttgttttgaggatttgagaattaggtt 17218650  T
Q  199 t 199  Q
    |    
T  17218649 t 17218649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 12037133 - 12037184
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaac 115  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  12037133 gagcaatctcgtagagtccgatcatctaatataaggtaagggtgggactaac 12037184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 22583661 - 22583727
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgt 162  Q
    ||||||||||||||| |||| |||| ||||||||  |||||||||||||||||||| |||| |||||    
T  22583661 aaggtaagggtgggattaacattctttaattctaggttgtataattctgaaattgaatttaacatgt 22583727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 23889846 - 23889784
Alignment:
Q  100 taagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgt 162  Q
    |||||||| || ||||||||||||||||||  |||||||||||||||||||| |||| |||||    
T  23889846 taagggtgagattaactttctctaattctaggttgtataattctgaaattgaatttaacatgt 23889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 36305903 - 36305837
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgt 165  Q
    ||||||||| || ||||||||| ||||| ||  |||||||||| |||||||||||||||||||||||    
T  36305903 gtaagggtgtgattaactttctttaattttaggttgtataattatgaaattgagtttagcatgttgt 36305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 22254817 - 22254741
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttg 171  Q
    ||||||| ||||||||||||||||||||||||||| |  |||||||||| ||||||  |||| || |||||||||||    
T  22254817 aaggtaatggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttg 22254741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 26454759 - 26454708
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  26454759 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 26454708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 42265559 - 42265610
Alignment:
Q  145 aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagg 196  Q
    ||||||| |||| || |||||||||||||||| |||||||||||||||||||    
T  42265559 aaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattagg 42265610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 17158964 - 17158998
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaa 130  Q
    |||||||||||||||||||||||||||||||||||    
T  17158964 aaggtaagggtgggactaactttctctaattctaa 17158998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 19880873 - 19880839
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaa 130  Q
    |||||||||||||||||||||||||||||||||||    
T  19880873 aaggtaagggtgggactaactttctctaattctaa 19880839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 130
Target Start/End: Complemental strand, 23479133 - 23479099
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaa 130  Q
    |||||||||||||||||||||||||||||||||||    
T  23479133 aaggtaagggtgggactaactttctctaattctaa 23479099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 22345249 - 22345186
Alignment:
Q  64 gagcaatcttgtagagtccg--atcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||| ||||||||||| |  ||||||||||  |||||||||||||||||| |||||||||||    
T  22345249 gagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22345186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 22356909 - 22356846
Alignment:
Q  64 gagcaatcttgtagagtccg--atcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||| ||||||||||| |  ||||||||||  |||||||||||||||||| |||||||||||    
T  22356909 gagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22356846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 34758915 - 34758875
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataa 139  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  34758915 gtaagggtgggactaactttctctaattctacgttgtataa 34758875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 125
Target Start/End: Complemental strand, 12577930 - 12577901
Alignment:
Q  96 aaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||||||    
T  12577930 aaggtaagggtgggactaactttctctaat 12577901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 21514756 - 21514695
Alignment:
Q  82 cgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattct 143  Q
    ||||||||||| | ||||||||||||||||||  ||||||||||  | | ||||||||||||    
T  21514756 cgatcatctaacttaaggtaagggtgggactagatttctctaataatgagttgtataattct 21514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 125
Target Start/End: Original strand, 22610268 - 22610297
Alignment:
Q  96 aaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||||||    
T  22610268 aaggtaagggtgggactaactttctctaat 22610297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 25657518 - 25657566
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||| ||||||||||||||||||| |  | |||||||||||    
T  25657518 gtaagggtgggagtaactttctctaattctaagtattttaattctgaaa 25657566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 161; Significance: 6e-86; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 68 - 256
Target Start/End: Original strand, 12506 - 12693
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  12506 aatcttgtagagtccgatcatctaatccaaggtaagggtgggaataactttctctaattctaagttgtataattctgaaattgagtttagcatgttatag 12605  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12606 gttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaatt 12693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 98 - 258
Target Start/End: Complemental strand, 5432 - 5273
Alignment:
Q  98 ggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 197  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgggaatttgggaattagg- 5334  T
Q  198 ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5333 ttttgaagtcgtaattggttgttaatagagtagaaaatcctttgaatttgtgtagaattga 5273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 72 - 258
Target Start/End: Original strand, 11251 - 11436
Alignment:
Q  72 ttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttg 171  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  11251 ttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtatatttctgaaattgagtttagcatgttgtaggttg 11350  T
Q  172 tagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11351 tagttatgggaatttgggaattaag-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 11436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 159; Significance: 9e-85; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 64 - 254
Target Start/End: Complemental strand, 32077 - 31888
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32077 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 31978  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  31977 ataggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtagaa 31888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 64 - 254
Target Start/End: Complemental strand, 37384 - 37195
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37384 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 37285  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 254  Q
     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  37284 ataggttgtagttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtagaa 37195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 77766 - 77577
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    |||||||||||||| |||||||||||  |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  77766 aatcttgtagagtctgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 77667  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  77666 gttgtagttatgggaatttgagaattagg-ttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtataattga 77577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 65 - 258
Target Start/End: Complemental strand, 1287 - 1095
Alignment:
Q  65 agcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttg 164  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1287 agcaattttgtagaatccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttg 1188  T
Q  165 taggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1187 taggttgtagttattgtaatttgggaattagg-ttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattga 1095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 158; Significance: 4e-84; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 65 - 258
Target Start/End: Complemental strand, 34421 - 34229
Alignment:
Q  65 agcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttg 164  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  34421 agcaattttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaatttgtttaattctgaaattgagtttagcatgttg 34322  T
Q  165 taggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34321 taggttgtagttatgggaatttgggaatcagg-ttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattga 34229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 6001 - 5921
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagtt 176  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| |||| ||||||||||| |||||||    
T  6001 aaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgttgtaggatgtagtt 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 189 - 28
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  189 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaattag 90  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  89 g-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 28  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 21762 - 21955
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  21762 gagcaatcttgtagagtccgatcatctaatttaaggtaatggtgggactaaatttctctaattctaagttgtatagttctgaaattgaatttagcatgtt 21861  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  21862 gtaggttgtatttatgggaatttgggaattagg-ttttgaagttgtaattggttgttaatagagtaaaaaataagttgaatttgtgtagaattga 21955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 68 - 258
Target Start/End: Original strand, 21300017 - 21300206
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtag 167  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  21300017 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaattaagtttagcatgttgtag 21300116  T
Q  168 gttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    || ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  21300117 gtagtagttatgggaatttgagaattagg-ttttgaagttgtaattggttgttaatagagtagaaaatctgttaaatttgtgtagaattga 21300206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 99 - 247
Target Start/End: Complemental strand, 7485050 - 7484903
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattagg-t 7484952  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7484951 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 7484903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 19921727 - 19921528
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtggga------ctaactttctctaattctaaattgtataattctgaaattgagtttag 157  Q
    ||||||||| |||||| |||||||||||||  |||||||||||||||      ||| |||||||||||||||| |||||||||||||||||||||||||     
T  19921727 gagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggagtgggactacctttctctaattctaagttgtataattctgaaattgagtttaa 19921628  T
Q  158 catgttgtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 257  Q
    |||||||||||||||| |||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  19921627 catgttgtaggttgtaattatggaaatttgggaattagg-ttttgaagttataattagttgttaatagagtagaaaatctgttgaatttgtgtagaattg 19921529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 20566597 - 20566445
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||           
T  20566597 aaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattagg------- 20566505  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 257  Q
      ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  20566504 --ttttgaagttgtaattggttgttaatagaatagaaaatccgtagaatttgtgtagaattg 20566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 86 - 245
Target Start/End: Complemental strand, 31622178 - 31622028
Alignment:
Q  86 catctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatt 185  Q
    ||||||||  ||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||| | |||||        ||||    
T  31622178 catctaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgta--------aatt 31622087  T
Q  186 tgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 245  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  31622086 tgggaattagg-ttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatt 31622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 36508628 - 36508757
Alignment:
Q  90 taattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 189  Q
    ||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||||||    
T  36508628 taatttaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacaggtggtaggttgtagttttggaaatttggg 36508727  T
Q  190 aattaggtttttgaagttgtaattggttgtt 220  Q
    ||||| | ||| |||||||||||||||||||    
T  36508728 aattatg-tttagaagttgtaattggttgtt 36508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 23199176 - 23199259
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||  |   ||||||||||||||||    
T  23199176 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 23199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 21617929 - 21618030
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattct-gaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||||||||||||||||||||||| |  ||||| |||  ||||||| |||| || |||||||||||||||| |||||||||| ||||||    
T  21617929 aaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttgggaatttgagaatta 21618028  T
Q  195 gg 196  Q
    ||    
T  21618029 gg 21618030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 22111876 - 22111715
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||| ||||||||||||||| |   |||||||||| ||||||||||||||||||||||| | ||||   | || ||||||| ||||||||||    
T  22111876 gtaagggtgggattaactttctctaatttttggttgtataattttgaaattgagtttagcatgttgttgtttgtgaatttgcgaatttgagaattaggtt 22111777  T
Q  199 t-----------ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 249  Q
    |           ||||||| |||||||||||||||||||| |||||||||  ||||||||||    
T  22111776 ttcaagtcgtaattgaagtcgtaattggttgttaatagagcagaaaatccaatgaatttgtg 22111715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 20469177 - 20469281
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||||||||||||||||||||||| |  ||||| |||| ||||||  |||| || |||||||||||||||| |||| | ||| ||||||    
T  20469177 aaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggacttgagaatta 20469276  T
Q  195 ggttt 199  Q
    |||||    
T  20469277 ggttt 20469281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 31457011 - 31456888
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| |||||||||||||||||| ||| | |||| ||||||||| ||  |||| ||    ||||||||||||| ||| ||||||| ||||||    
T  31457011 aaggtaagggtgagactaactttctctaattttaagtggtatgattctgaaactggatttaacacaaggtaggttgtagttttggaaatttggaaattag 31456912  T
Q  196 gtttttgaagttgtaattggttgtt 220  Q
    | ||| |||||||||||||||||||    
T  31456911 g-tttagaagttgtaattggttgtt 31456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 21398613 - 21398674
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| || |||||||||||    
T  21398613 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggattagctttctctaat 21398674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 6551291 - 6551342
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  6551291 aaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 6551342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 10954140 - 10954038
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||||||||||| |||  ||||||||| |||| ||||| ||||||||  |||| ||||||||||| ||||||| |||  ||||  |||||||    
T  10954140 aaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgttgtaggatgtagttttggagatttaagaattag 10954041  T
Q  196 gtt 198  Q
    |||    
T  10954040 gtt 10954038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 10774665 - 10774764
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| ||| |||||||| || ||||| |||||| ||||||| |||| |||| ||||| |||||||| || ||||| ||||||||    
T  10774665 aaggtaagggtgggactaaccttcactaattct-aagtgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaatta 10774762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 30616663 - 30616614
Alignment:
Q  98 ggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||| ||||||||||||||||| |||||| |||||||||    
T  30616663 ggtaagggtgggactgactttctctaattctaagttgtatgattctgaaa 30616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 32607285 - 32607346
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||| |||||| ||||| |||||||  |||||||||||||||||| |||||||||||    
T  32607285 gagcaatctcgtagagaccgattatctaatctaaggtaagggtgggactagctttctctaat 32607346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 266089 - 266038
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  266089 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 266038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 17011779 - 17011728
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  17011779 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 17011728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 25249829 - 25249910
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 176  Q
    ||||||||||| |||||||| |||| ||||| ||| || |||||||||| ||||||  |||| ||||||||||||| |||||    
T  25249829 aaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25249910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 25313613 - 25313694
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 176  Q
    ||||||||||| |||||||| |||| ||||| ||| || |||||||||| ||||||  |||| ||||||||||||| |||||    
T  25313613 aaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 31251931 - 31252011
Alignment:
Q  135 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggt 216  Q
    ||||||||||||||||  |||| || ||| |||||||||||| | |||||||| |||||||| ||| |||||| ||||||||    
T  31251931 tataattctgaaattggatttaacaggttataggttgtagttttaggaatttgagaattagg-tttagaagttataattggt 31252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 8503857 - 8503913
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttct 120  Q
    ||||||||| |||||| ||||| |||||||  |||||||||||||||||||| ||||    
T  8503857 gagcaatctcgtagagaccgattatctaatataaggtaagggtgggactaaccttct 8503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 17876186 - 17876132
Alignment:
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgt 219  Q
    ||||||||||||| ||  ||||||||||||||| ||| ||||||||||||||||||    
T  17876186 gtaggttgtagttctgaaaatttgggaattagg-tttagaagttgtaattggttgt 17876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 18744925 - 18744874
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||  |   ||||||||||||||||    
T  18744925 aaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 18744874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 21405678 - 21405751
Alignment:
Q  145 aaattgagtttagcatgttgtaggttgtagttatgggaatttggg-aattaggtttttgaagttgtaattggttg 218  Q
    ||||||| |||| || ||||| |||||||||| |||||||||||| |||||||  || |||||||||||||||||    
T  21405678 aaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagg-gttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 697 - 858
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  697 aaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaattag 796  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  797 g-ttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattga 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 139; Significance: 8e-73; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 3233 - 3072
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  3233 aaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgactttagtatgttgtaggttgtagttatgggaatttgggaattag 3134  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3133 g-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 2558 - 2454
Alignment:
Q  153 tttagcatgttgtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtag 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2558 tttagcatgttgtaggttgtagttatgggaatttgggaattaggtttt-gaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtag 2460  T
Q  253 aattga 258  Q
    ||||||    
T  2459 aattga 2454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 13393 - 13554
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13393 aaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttttgggaatttgggaattag 13492  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13493 g-ttttgaagttataattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 13554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 139; Significance: 8e-73; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 96 - 258
Target Start/End: Original strand, 169000 - 169161
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  169000 aaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 169099  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  169100 g-ttttgaacttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattga 169161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 143667 - 143501
Alignment:
Q  91 aattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 190  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||    
T  143667 aatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattttaatttggga 143568  T
Q  191 attaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    |||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  143567 attatg-ttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 143501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 569 - 408
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  569 aaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaattag 470  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  469 g-ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 146774 - 146613
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146774 aaggtatgggtgggactaacttactctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 146675  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  146674 g-ttttgaagttataattggttgttaatagagtaggaaatccgttgaatttgtgtagaattga 146613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 64 - 199
Target Start/End: Original strand, 24100 - 24235
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24100 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 24199  T
Q  164 gtaggttgtagttatgggaatttgggaattaggttt 199  Q
    ||||||||||||||||||||||||||||||||||||    
T  24200 gtaggttgtagttatgggaatttgggaattaggttt 24235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 30123 - 30023
Alignment:
Q  95 caaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 193  Q
    ||||||||||||||||||||| |||  ||| ||||| |  | |||||||| ||||||  |||| ||||||||||||| ||||| || | |||||||||||    
T  30123 caaggtaagggtgggactaaccttcaataaatctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaatt 30025  T
Q  194 ag 195  Q
    ||    
T  30024 ag 30023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 96 - 258
Target Start/End: Complemental strand, 1216 - 1055
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| ||||||||||  |||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  1216 aaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttagcatgttttaggttgtagttatgggaatttgggaattag 1117  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1116 g-ttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattga 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 124; Significance: 7e-64; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 82 - 258
Target Start/End: Original strand, 328275 - 328452
Alignment:
Q  82 cgatcatctaattcaaggtaagggtgggactaactttctctaattct--aaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatg 179  Q
    |||||||||||   |||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||| || |||||||||||    
T  328275 cgatcatctaacctaaggtaagggtgggactaactttctctaattctctaagttgtataattctgaaattgagtttagcatgttgaagattgtagttatg 328374  T
Q  180 ggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 258  Q
    | ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  328375 gaaatttgggaattagg-tttcgaagttgtaattggttgttaatagagtagaaaatcagttgaatttgtgtagaattga 328452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 75834 - 75691
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||| ||||||||||||||  ||  |||||||||||||||||||||| ||||||||||| | |||||  | || ||||||||||||||||||    
T  75834 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagtgtagcatgttgttgtttgtaaatttgtgaatttgggaattaggtt 75735  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 249  Q
           ||||||||||||||||||||| |||||||||| |||||||||||    
T  75734 -------ttgtaattggttgttaatagaatagaaaatccattgaatttgtg 75691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 103 - 251
Target Start/End: Complemental strand, 72980 - 72841
Alignment:
Q  103 gggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttttg 202  Q
    |||||||| |||||||||| |||  ||  |||||||||||| ||||||||||||| ||||||| | | ||        ||||||| |||||||||||| |    
T  72980 gggtgggattaactttctccaatcttaggttgtataattctaaaattgagtttagtatgttgttgttagt--------gaatttgtgaattaggtttt-g 72890  T
Q  203 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 251  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  72889 aagttgtaattggttgttaatagaatagaaaatccattgaatttgtgta 72841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 110222 - 110121
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 197  Q
    ||||||||| |||||||||||||||||||||| |  |||||||||| ||||||| |||| || |||||||||||||||| |||| ||||| | |||||||    
T  110222 gtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttggggatttgaggattaggt 110123  T
Q  198 tt 199  Q
    ||    
T  110122 tt 110121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 73172 - 73109
Alignment:
Q  64 gagcaatcttgtagagtccgat--catctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||| ||||||||||| ||   ||||||||  ||||||||||||||||||||||||||||||    
T  73172 gagcaagcttgtagagtctgaaaccatctaatgtaaggtaagggtgggactaactttctctaat 73109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 78154 - 78298
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  78154 gagcaatcttgtagagtacgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 78253  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgt 209  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  78254 gtaggttgtagttatgggaatttggaaattagg-ttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 96 - 235
Target Start/End: Original strand, 29574 - 29711
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29574 aaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgtcgtaggttgtagttatgggaatttgggaattag 29673  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaat 235  Q
    | |||||||||||||||||||||| ||||| |||||||||    
T  29674 g-ttttgaagttgtaattggttgtaaatag-gtagaaaat 29711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 21662 - 21539
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||| |||| ||  |||| ||  | |||| |||||||| ||| |||||||||||||     
T  21662 aaggtaagggtgggactagctttctctaattctaagttgtatgattcagaaactggatttaacagatggtagcttgtagttttggaaatttgggaattat 21563  T
Q  196 gtttttgaagttgtaattggttgtt 220  Q
    | ||| |||||||||||||||||||    
T  21562 g-tttagaagttgtaattggttgtt 21539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 64 - 257
Target Start/End: Complemental strand, 79132 - 78955
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  79132 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 79033  T
Q  164 gtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 257  Q
           ||||||||||||||| ||         ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  79032 -------gtagttatgggaattagg---------ttttgaagttgtaattggttgttaataaagtagaaaatccattgaatttgtgtagaattg 78955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 19804 - 19652
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||| ||||||||||||||| |||||||| |||        |||||||||||||||    
T  19804 aaggtaagggtgagactgactttctctaattctaagttgtataattctcaaattgagtttagcaagttgtaggctgt--------gaatttgggaattag 19713  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 257  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19712 gttttt-aagttgtaattggttgttaatagagtagaaaatccattgaatttgtgtagaattg 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 96 - 222
Target Start/End: Complemental strand, 35541 - 35418
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  35541 aaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt--tagttttgggaatttgggaattag 35444  T
Q  196 gtttttgaagttgtaattggttgttaa 222  Q
    | ||||||||| |||||||||||||||    
T  35443 g-ttttgaagtcgtaattggttgttaa 35418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 2638 - 2524
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgtt 163  Q
    ||||||||| |||||| |||||||||||||  | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2638 gagcaatctcgtagagaccgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 2539  T
Q  164 gtaggttgtagttat 178  Q
    |||||||||||||||    
T  2538 gtaggttgtagttat 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 72; Significance: 8e-33; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 100 - 256
Target Start/End: Original strand, 112971 - 113127
Alignment:
Q  100 taagggtgggactaactttctctaattctaaattgtataattctgaaa--ttgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 197  Q
    ||||||||||||||||||||||||||||||| |  ||||| |||||||  |||| |||| || ||||||||||||| || |||||||||||||||||||     
T  112971 taagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttgggaatttgggaattagg- 113069  T
Q  198 ttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    ||| ||||||||||||||||||| | | ||||||||||  |||||||| ||||||||||    
T  113070 tttagaagttgtaattggttgttta-acagtagaaaatttgttgaattggtgtagaatt 113127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 81618 - 81501
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| ||| |||||||||||| | || ||||| ||| |||| |||| || |||||||||||||||| |||||||||||||||||    
T  81618 aaggtaagggtgggactaaccttcactaattctaaatgg-atgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatta 81520  T
Q  195 ggtttttgaagttgtaattg 214  Q
    || ||| |||||||||||||    
T  81519 gg-tttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 256
Target Start/End: Original strand, 117808 - 117960
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg--aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 193  Q
    ||||||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| |||| || |||| || |||||        | ||||||||||    
T  117808 aaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgaagattgta--------attttgggaatt 117899  T
Q  194 aggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    ||| ||| ||||||||||||||||||| | | |||||||||||  ||||||| | ||||||||    
T  117900 agg-tttagaagttgtaattggttgttta-acagtagaaaatctattgaattggcgtagaatt 117960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 2940 - 2787
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||| | ||||        ||||||| |||||||    
T  2940 aaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgtgaattag 2849  T
Q  196 gtttttgaagttgt-aattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 257  Q
    | ||||||| | || ||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  2848 g-ttttgaattagtaaattggttgttaatagaatagaaaatcctttgaatttgtgtataattg 2787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 6688 - 6809
Alignment:
Q  98 ggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 197  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||| |||||||||     
T  6688 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattagg- 6786  T
Q  198 ttttgaagttgtaattggttgtt 220  Q
    ||| |||||||||||||||||||    
T  6787 tttagaagttgtaattggttgtt 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 256
Target Start/End: Original strand, 10756 - 10913
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| ||||| ||  |||| || |||||||||| ||||| ||||||||||||||||||    
T  10756 aaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaggttgtaggtt-tagtt-tgggaatttgggaattag 10853  T
Q  196 gtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 256  Q
    |  || |||||||||||||||||||   | |||||| ||||  ||||||| ||||||||||    
T  10854 g-gttagaagttgtaattggttgttgtaatagtagagaatctattgaattggtgtagaatt 10913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 5046 - 5120
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggtt 170  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| ||||| ||  |||| || ||||||||||    
T  5046 aaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaagttgtaggtt 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 19290 - 19207
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||||||||||||| |||||||  || |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19290 gagcaatcttgtagagtccgatgatctaatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 17913 - 17992
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17913 aatcttgtagaatccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 64; Significance: 4e-28; HSPs: 6)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 251
Target Start/End: Complemental strand, 5310 - 5167
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||| ||||||||||||||  ||  |||||||||||||||||||||||| ||||||||| | ||||        |||||||||||||| |||    
T  5310 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattacgtt 5219  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 251  Q
    || ||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  5218 tt-gaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 5167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 251
Target Start/End: Complemental strand, 11430 - 11287
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||| ||||||||||||||  ||  |||||| ||||||||||||||||| ||||||||| | ||||        ||||||||||||||||||    
T  11430 gtaagggtgggattaactttctctaatcttaggttgtatcattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattaggtt 11339  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 251  Q
    || ||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  11338 tt-gaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 11287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 250
Target Start/End: Complemental strand, 19754 - 19605
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    ||||| |||||| ||| ||||||||||  ||  || ||||||||||||||||||||||||||||||| | ||||   | || ||||||| |||||||| |    
T  19754 gtaagtgtgggattaaatttctctaatcttaggttatataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgagaattagg-t 19656  T
Q  199 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgt 250  Q
    | |||||||||||||| ||||||||| | |||||||||| ||||||||||||    
T  19655 tatgaagttgtaattgattgttaata-aatagaaaatccattgaatttgtgt 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 5537 - 5454
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||| |||||| || ||||||||||  |||||||||||||||||| |||||||||||  | | ||||||||||||||||    
T  5537 gagcaatctcgtagagaccaatcatctaatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaa 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 11699 - 11639
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaa 124  Q
    ||||||||| | |||| |||||||||||||  ||| ||||||||||||||| |||||||||    
T  11699 gagcaatctcgcagagaccgatcatctaatgtaagataagggtgggactaaatttctctaa 11639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 19939 - 19878
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||| |||||  |||||||||||||  ||||||||||| ||||||  ||||||||||    
T  19939 gagcaatctcgtagaaaccgatcatctaatctaaggtaagggtaggactagatttctctaat 19878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 218
Target Start/End: Original strand, 1043 - 1181
Alignment:
Q  80 tccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttat 178  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||||||| |  |||||||||| ||||||| |||| || ||||||||||| |||| |    
T  1043 tccgatcatctaatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggttggagtttt 1142  T
Q  179 gggaatttgggaattaggtttttgaagttgtaattggttg 218  Q
    | |||||||||| |||||  || |||||||||||| ||||    
T  1143 gagaatttgggatttagg-gttagaagttgtaattagttg 1181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 16650 - 16532
Alignment:
Q  101 aagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttt 200  Q
    |||||||||||||| ||| ||||||||||| |||||| ||||||||| ||  |||| ||||| ||||||||||||| ||| ||||||| ||||||| |||    
T  16650 aagggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaacatgtggtaggttgtagttttggaaatttggcaattagg-ttt 16552  T
Q  201 tgaagttgtaattggttgtt 220  Q
     |||||||||||||||||||    
T  16551 agaagttgtaattggttgtt 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 61821 - 61900
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  61821 aatcttgtagaatccgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 61900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 4710 - 4830
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||| || ||||||||||| ||||   ||||||||| |||||    
T  4710 aaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggttgaagtttgtggaatttggaaatta 4809  T
Q  195 ggtttttgaagttgtaattggt 216  Q
    || ||| |||||||| ||||||    
T  4810 gg-tttagaagttgtcattggt 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 26638 - 26779
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 197  Q
    |||||||||||| ||||||||| ||||| ||  ||||||||||||| ||||||||||||||||||||| | ||||        ||||||||||||||||     
T  26638 gtaagggtgggattaactttctttaattttaggttgtataattctgaaaattgagtttagcatgttgttgtttgt--------gaatttgggaattagg- 26728  T
Q  198 ttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaatttg 247  Q
    ||||||| | |||| |||||||||||||||||||||||||| |||||||||    
T  26729 ttttgaattagtaatttggttgttaatagagtagaaaatccattgaatttg 26779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 96 - 195
Target Start/End: Original strand, 135505 - 135604
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| ||| |||||||||| | |||||||||||||| |||| |||| || |||||||||||||||| |||||||||||||||||    
T  135505 aaggtaagggtgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatta 135603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 5716 - 5633
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||  |   ||||||||||||||||    
T  5716 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 213
Target Start/End: Complemental strand, 10846 - 10741
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||| | ||||        |||||||||||||||| |    
T  10846 gtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgggaattagg-t 10756  T
Q  199 tttgaagttgtaatt 213  Q
    |||||||||||||||    
T  10755 tttgaagttgtaatt 10741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 11030 - 10969
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||| || |||||||||||  ||||||||||||| |||| |||||||||||    
T  11030 gagcaatcttgtagaatctgatcatctaatataaggtaagggtggaactagctttctctaat 10969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 23861 - 23922
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  23861 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgagactagctttctctaat 23922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 8693 - 8571
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aatt 193  Q
    |||||||||||||||||||| ||| |||||||||| | |||| ||||||||| |||| |||| || |||||||||||||||| |||||||||||| ||||    
T  8693 aaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaaatt 8595  T
Q  194 aggtttttgaagttgtaattggttg 218  Q
    |||  || |||||||||||||||||    
T  8594 agg-gttagaagttgtaattggttg 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 106052 - 106175
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||| |||| ||  |||| || || ||||  ||||||| ||| ||||||||||||||    
T  106052 aaggtaagggtgtgactaactttctctaattctaagttgtatgattcggaaactggatttaacaggtggtagactgtagttttggaaatttgggaattag 106151  T
Q  196 gtttttgaagttgtaattggttgtt 220  Q
    | ||| || ||||||||||||||||    
T  106152 g-tttagacgttgtaattggttgtt 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 218
Target Start/End: Original strand, 3052 - 3174
Alignment:
Q  95 caaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 193  Q
    ||||||||||||||||||||| |||  ||||||||| | |||| ||||||||| |||| |||| || |||||||||||||||| ||||||||| ||||||    
T  3052 caaggtaagggtgggactaaccttcaataattctaagt-gtattattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttaggaatt 3150  T
Q  194 aggtttttgaagttgtaattggttg 218  Q
    |||  || |||||||||||||||||    
T  3151 agg-gttagaagttgtaattggttg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 100 - 218
Target Start/End: Original strand, 2026 - 2143
Alignment:
Q  100 taagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    ||||||||||| |||| ||| |||||||||| | |||| ||| ||||| |||| |||| ||||||||||||||||||| ||| |||||||||||||||||    
T  2026 taagggtgggattaaccttcactaattctaagt-gtatgattttgaaaattgaatttaacatgttgtaggttgtagttttggaaatttgggaattaggtt 2124  T
Q  199 tttgaagttgtaattggttg 218  Q
    | | ||||||||||||||||    
T  2125 tat-aagttgtaattggttg 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 60946 - 60843
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||| || ||||||| |||| ||||||||| |||||||||||||| |||||| |||| ||||||||||||||||||| || | ||||| ||||||    
T  60946 aaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatta 60847  T
Q  195 ggtt 198  Q
    ||||    
T  60846 ggtt 60843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 198
Target Start/End: Original strand, 126313 - 126407
Alignment:
Q  104 ggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||  |||| || ||||||| |||||||| || | ||||| ||||||||||    
T  126313 ggtgggactaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgtagattgtagttttgaggatttgagaattaggtt 126407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 20005 - 19905
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||| ||||||  |||| || |||||||||||||||| |||| ||||| ||||||    
T  20005 aaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tggggatttgagaatta 19907  T
Q  195 gg 196  Q
    ||    
T  19906 gg 19905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 7328 - 7205
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgg-gaatt 193  Q
    ||||| |||||||||||||| |||| ||||||||| ||||||||||||| ||||||  |||  ||||||||||||| ||||| |||||||||||  ||||    
T  7328 aaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggttatagttttgggaatttggaaaatt 7229  T
Q  194 aggtttttgaagttgtaattggttg 218  Q
    |||  || |||||||||||||||||    
T  7228 agg-gttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 67172 - 67068
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||| |||||||||||||||||||||||| || | ||||||||||| ||||||  |||| ||  ||||||||||||||| | ||||||||||||| |    
T  67172 aaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaacaaattgtaggttgtagttttaggaatttgggaataa 67073  T
Q  195 ggttt 199  Q
    |||||    
T  67072 ggttt 67068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 2423 - 2506
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||||||| |||||||||||  |   ||||||||||||||||    
T  2423 gagcaatcttgtaaagtccgaacatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 1855 - 1917
Alignment:
Q  103 gggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgt 165  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||| |||| ||||||||    
T  1855 gggtgggactaactttctctaattctaagtggtataattctgaaattgaatttaacatgttgt 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 20087 - 20202
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||| ||||||||| ||| |||||||||| | |||||||||||||| |||| |||| || |||||||||| ||||| |||||||||||||||||    
T  20087 aaggtaagggcgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttatagtt-tgggaatttgggaatta 20184  T
Q  195 ggtttttgaagttgtaatt 213  Q
     | ||| ||||||||||||    
T  20185 tg-tttagaagttgtaatt 20202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 2187 - 2252
Alignment:
Q  82 cgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||   ||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  2187 cgatcatctaacctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 18613 - 18670
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  18613 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaat 18670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 5712 - 5761
Alignment:
Q  100 taagggtgggactaactttctctaattctaaattgtataattctgaaatt 149  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 5761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 4991 - 4888
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||||||| | |||  |||| ||||||||||| ||||||| || | ||||  ||||||    
T  4991 aaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagttttgaggatttaagaatta 4892  T
Q  195 ggtt 198  Q
    ||||    
T  4891 ggtt 4888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 4436 - 4333
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||| | |||||||||| |||| ||||||||| |||||||||||||| || ||  |||| ||||||||||||||||||| || | ||||| ||||||    
T  4436 aaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaatta 4337  T
Q  195 ggtt 198  Q
    ||||    
T  4336 ggtt 4333  T

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Target: scaffold0107 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 13525 - 13572
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13525 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaac 13572  T

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Target: scaffold0071 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 15323 - 15272
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  15323 aaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15272  T

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Target: scaffold0003 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 96446 - 96347
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||| ||||||||||||||||||||||||| | |||||| ||||||||| ||  |||| || |||||||||||||||| || | ||| | ||||||||||    
T  96446 gtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgtaggttgtagttttgaggattggagaattaggtt 96347  T

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Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 398613 - 398510
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| |||| ||||||||  |||||||||||||| |||||  |||| ||||||||||| ||||||| || | ||||  ||||||    
T  398613 aaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatttaagaatta 398514  T
Q  195 ggtt 198  Q
    ||||    
T  398513 ggtt 398510  T

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Target: scaffold0516 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 5292 - 5353
Alignment:
Q  82 cgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattct 143  Q
    |||||||||||   ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  5292 cgatcatctaacctaaggtaagggtgggactaactttctctaattttaagttgtataattct 5353  T

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Target: scaffold0676 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 2960 - 2881
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||||||||| |||||| ||||  |||||||||||||||||| |||||||||||  |   ||||||||||||||||    
T  2960 aatcttgtagagtctgatcatttaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2881  T

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Target: scaffold0261 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 6620 - 6686
Alignment:
Q  182 aatttgggaattaggtttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 249  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||||| ||||  ||||||||||    
T  6620 aatttgggaattaggtttt-gatgtcgtaattggttgttaatagagtagaagatccaatgaatttgtg 6686  T

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Target: scaffold0065 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 198
Target Start/End: Original strand, 52549 - 52648
Alignment:
Q  100 taagggtgggactaactttctctaattctaaattgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 198  Q
    |||||||||||||||| |||  ||||||||| |||| ||||||||| |||||  |||| ||||||||||| ||||||| || | ||||| ||||||||||    
T  52549 taagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtaggatgtagttttgaggatttgagaattaggtt 52648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 29439 - 29340
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||  |||| ||||||||| |||||| |||||| ||| ||  |||| || |||||||||||||||| |||| ||||| ||||||    
T  29439 aaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatta 29340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 5417 - 5318
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| ||| |||||||| || ||||| |||||| ||||||| |||| |||| ||||| |||||||| || ||||| ||||||||    
T  5417 aaggtaagggtgggactaaccttcactaattct-aagtgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaatta 5320  T

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Target: scaffold0439 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 12403 - 12323
Alignment:
Q  139 attctgaaattgagtttagcatg-ttgtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttgt 219  Q
    ||||||||||||| |||| |||| ||||||||||||||| ||| |||||| |||||||| ||| ||||||||||| ||||||    
T  12403 attctgaaattgaatttaacatggttgtaggttgtagttttggaaatttgagaattagg-tttagaagttgtaataggttgt 12323  T

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Target: scaffold0577 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 9110 - 9011
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 195  Q
    |||||||||||||||||||| |||  ||||||| | |  | ||||||||||| ||  |||| || |||||||||||||||| | ||||||||||||||||    
T  9110 aaggtaagggtgggactaaccttcagtaattctgagta-tgtaattctgaaactggatttaacaggttgtaggttgtagtttttggaatttgggaattag 9012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 11130 - 11190
Alignment:
Q  65 agcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||| ||| ||||||||| |||||| ||||||||| |||||||| |||||||||||    
T  11130 agcaatcttttagtgtccgatcacctaatttaaggtaaggatgggactagctttctctaat 11190  T

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Target: scaffold0515 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 5080 - 5029
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  5080 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 9011 - 8960
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  9011 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 8960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 5080 - 5029
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  5080 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 21148 - 21097
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  21148 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 21097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 34163 - 34112
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  34163 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 34112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 28634 - 28583
Alignment:
Q  64 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaac 115  Q
    ||||||||||||||||||| ||||||||||  |||||||| |||||||||||    
T  28634 gagcaatcttgtagagtcctatcatctaatctaaggtaagagtgggactaac 28583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 69854 - 69905
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||||    
T  69854 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 69905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 197 - 231
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaa 130  Q
    |||||||||||||||||||||||||||||||||||    
T  197 aaggtaagggtgggactaactttctctaattctaa 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 4696 - 4612
Alignment:
Q  133 tgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttttgaagttgtaattggttg 218  Q
    ||||| ||||| ||||||| |||| || ||| |||||||| ||| |||||||||| |||||||| ||| |||||||||||| ||||    
T  4696 tgtatgattctaaaattgaatttaacaggttttaggttgtggttttgggaatttgagaattagg-tttagaagttgtaattagttg 4612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 31159 - 31060
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| |||  ||||||| | |  | ||||||||||| |||  |||| || |||||||||||||||| |||||||||||||||||    
T  31159 aaggtaagggtgggactaaccttcaataattctgagta-tgtaattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgggaatta 31062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 26776 - 26727
Alignment:
Q  98 ggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    ||||||||||||| ||||||||||||||| ||  ||||||||||||||||    
T  26776 ggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 26727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 158823 - 158923
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    |||||||||||||||||||| |||  ||||||| | |  ||| ||||| ||| |||  |||| || |||||||||||||||| |||||||||||||||||    
T  158823 aaggtaagggtgggactaaccttcaataattctgagta-tatgattctaaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaatta 158921  T
Q  195 gg 196  Q
    ||    
T  158922 gg 158923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 127310 - 127373
Alignment:
Q  64 gagcaatcttgtagagtccg--atcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    |||||| ||||||||||| |  ||||||||||  |||||||||||||||||| |||||||||||    
T  127310 gagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 127373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 13442 - 13391
Alignment:
Q  145 aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagg 196  Q
    ||||||| |||| || ||||||||||| |||| |||||||||||||||||||    
T  13442 aaattgaatttaacaagttgtaggttgaagttttgggaatttgggaattagg 13391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 11232 - 11193
Alignment:
Q  68 aatcttgtagagtccgatcatctaattcaaggtaagggtg 107  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  11232 aatcttgtagagtccgatcatctaatctaaggtaagggtg 11193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 6416 - 6385
Alignment:
Q  99 gtaagggtgggactaactttctctaattctaa 130  Q
    ||||||||||||||||||||||||||||||||    
T  6416 gtaagggtgggactaactttctctaattctaa 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 29217 - 29268
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctgaaa 147  Q
    |||||||| |||||||||||||||||||||||||| |  | |||||||||||    
T  29217 aaggtaagagtgggactaactttctctaattctaagtattttaattctgaaa 29268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 510 - 448
Alignment:
Q  135 tataattctgaaattgagtttagcatgttgtaggttgtagttatg-ggaatttgggaattagg 196  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| || ||| |||||||||||||    
T  510 tataattctgaaattggatttaacatgttgtaggttatagttttgaggattttgggaattagg 448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 130
Target Start/End: Original strand, 21778 - 21812
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaa 130  Q
    ||||||||| |||||||||||||||||||||||||    
T  21778 aaggtaaggatgggactaactttctctaattctaa 21812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 3411 - 3452
Alignment:
Q  84 atcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||  |||||||||||||||||| |||||||||||    
T  3411 atcatctaatctaaggtaagggtgggactagctttctctaat 3452  T

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Target: scaffold0505 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 4999 - 4958
Alignment:
Q  84 atcatctaattcaaggtaagggtgggactaactttctctaat 125  Q
    ||||||||||  |||||||||||||||||| |||||||||||    
T  4999 atcatctaatataaggtaagggtgggactagctttctctaat 4958  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 35514 - 35563
Alignment:
Q  145 aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 194  Q
    ||||||| |||| ||  ||||||||||||||| |||||||||||||||||    
T  35514 aaattgaatttaacaacttgtaggttgtagttttgggaatttgggaatta 35563  T

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Target: scaffold0411 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 13418 - 13505
Alignment:
Q  96 aaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 183  Q
    |||||||||||||||||||| |||  ||||||| ||  || |||||||| ||| ||| |||| || |||||||||||||||| ||||||    
T  13418 aaggtaagggtgggactaaccttcaataattct-aagggtttaattctgaaaactgaatttaacaagttgtaggttgtagttttgggaa 13505  T

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Target: scaffold0205 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 30706 - 30607
Alignment:
Q  95 caaggtaagggtgggactaactttctctaattctaaattgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 193  Q
    ||||||||||||| ||||||| |||  ||||||||| |  | |||||||| ||||||  |||| ||||||||||||| ||||| || |||||||| ||||    
T  30706 caaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgagaatttggaaatt 30608  T

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