View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3019_2D_high_3 (Length: 230)
Name: NF3019_2D_high_3
Description: NF3019_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3019_2D_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 43596787 - 43596577
Alignment:
| Q |
1 |
atctagtttgatatatttaatttggggtgcatgtttgaacccgcaccattttagcggaaaacttttcaaaggattaaattgtacatttatgtgttcattc |
100 |
Q |
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| T |
43596787 |
atctagtttggtatatttaatttgaggtgcatgtttgaacccgcaccattttagcggaaaacttttcaaaggattaaattgtacatttatgtgttcattc |
43596688 |
T |
|
| Q |
101 |
tgaaaaaggatagtcaacaatccttgttgaacttcaaacctatttctttagttgtttgtatacacaaggtgttgttaacatggttggccattggccaata |
200 |
Q |
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| T |
43596687 |
tgaaaaaggatagtcaacaatccttgttgaacttcaaacctatttctttagttgtttgtatacacaaggtgttgttaacatggttggccattggccaata |
43596588 |
T |
|
| Q |
201 |
ggttaaaagtt |
211 |
Q |
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||||||||||| |
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| T |
43596587 |
ggttaaaagtt |
43596577 |
T |
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