View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3021_low_68 (Length: 237)
Name: NF3021_low_68
Description: NF3021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3021_low_68 |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 38577284 - 38577505
Alignment:
| Q |
1 |
gaaatagtgttgatgacttgatgtactactagcttaatatagcagtacactttgagatcttccagaatccattctttgagttggccaatagcaatagtac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
38577284 |
gaaatagtgttgatgacttgatgtactactagcttaatatagcagtacactttgagatcatccagaatccattctttgagttggccaatagcaatagtac |
38577383 |
T |
|
| Q |
101 |
aacaatgatataataagtagtacatctaaaatttcctagtacatgcatgtactgcaaacttgcaaagtacaaactaatccccctttatgcgattacatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38577384 |
aacaatgatataataagtagtacatctaaaatttcctagtacatacatgtactgcaaacttgcaaagtacaaactaatccccctttatgcgattacatat |
38577483 |
T |
|
| Q |
201 |
agaatcaaacgggatcatacat |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
38577484 |
agaatcaaacgggatcatacat |
38577505 |
T |
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