View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3022_low_4 (Length: 325)

Name: NF3022_low_4
Description: NF3022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3022_low_4
NF3022_low_4
[»] chr4 (63 HSPs)
chr4 (1-224)||(33753782-33754006)
chr4 (246-318)||(6957769-6957841)
chr4 (246-318)||(8286610-8286682)
chr4 (246-324)||(7947108-7947186)
chr4 (246-323)||(53707965-53708042)
chr4 (246-318)||(33227380-33227452)
chr4 (246-325)||(56375461-56375540)
chr4 (246-324)||(4441024-4441102)
chr4 (246-324)||(31959847-31959925)
chr4 (246-324)||(39708604-39708682)
chr4 (247-325)||(47265227-47265305)
chr4 (246-324)||(52569548-52569626)
chr4 (246-318)||(12494834-12494906)
chr4 (246-318)||(23906336-23906408)
chr4 (246-324)||(1777050-1777128)
chr4 (246-324)||(27450213-27450290)
chr4 (246-324)||(33190881-33190959)
chr4 (246-324)||(48622576-48622654)
chr4 (246-324)||(50287133-50287210)
chr4 (245-322)||(43434094-43434171)
chr4 (246-318)||(1793633-1793705)
chr4 (247-315)||(19154905-19154973)
chr4 (252-324)||(19969358-19969430)
chr4 (246-318)||(21237029-21237101)
chr4 (3-65)||(23218201-23218261)
chr4 (245-324)||(28236352-28236431)
chr4 (246-324)||(436400-436478)
chr4 (246-324)||(21528459-21528537)
chr4 (246-324)||(32479209-32479287)
chr4 (246-318)||(46582864-46582936)
chr4 (246-318)||(48174132-48174204)
chr4 (256-324)||(51811311-51811379)
chr4 (3-65)||(13740233-13740293)
chr4 (246-324)||(26037538-26037616)
chr4 (246-323)||(37798022-37798099)
chr4 (246-307)||(50679675-50679736)
chr4 (247-314)||(16003098-16003165)
chr4 (3-65)||(21355945-21356005)
chr4 (248-318)||(4548195-4548265)
chr4 (246-324)||(37773484-37773562)
chr4 (258-324)||(55388244-55388310)
chr4 (246-311)||(20192204-20192269)
chr4 (246-315)||(53518365-53518434)
chr4 (253-317)||(20601692-20601756)
chr4 (246-318)||(51421901-51421973)
chr4 (3-52)||(45144050-45144097)
chr4 (3-52)||(45152819-45152866)
chr4 (246-318)||(27983364-27983436)
chr4 (248-324)||(34208302-34208378)
chr4 (248-324)||(56225241-56225317)
chr4 (282-324)||(19061968-19062010)
chr4 (246-324)||(20591339-20591416)
chr4 (246-292)||(20821073-20821119)
chr4 (256-298)||(41729509-41729551)
chr4 (246-324)||(55007917-55007995)
chr4 (247-324)||(35690443-35690520)
chr4 (246-283)||(50862815-50862852)
chr4 (270-318)||(16875791-16875839)
chr4 (258-318)||(25575007-25575067)
chr4 (246-318)||(28486092-28486164)
chr4 (246-318)||(28550494-28550566)
chr4 (284-324)||(49939767-49939807)
chr4 (3-35)||(54785197-54785229)
[»] chr2 (45 HSPs)
chr2 (1-103)||(32339618-32339720)
chr2 (246-324)||(12734871-12734949)
chr2 (246-324)||(28508849-28508927)
chr2 (246-324)||(227360-227438)
chr2 (246-324)||(3866243-3866321)
chr2 (246-324)||(8180951-8181029)
chr2 (246-324)||(30306203-30306281)
chr2 (246-324)||(36183622-36183700)
chr2 (245-318)||(7326199-7326272)
chr2 (246-324)||(25834849-25834927)
chr2 (246-324)||(38430055-38430133)
chr2 (246-324)||(38452719-38452797)
chr2 (246-316)||(45367666-45367736)
chr2 (246-318)||(11992147-11992219)
chr2 (246-317)||(2610759-2610830)
chr2 (246-324)||(451681-451759)
chr2 (246-324)||(3243686-3243764)
chr2 (246-324)||(35643119-35643197)
chr2 (247-324)||(4807767-4807844)
chr2 (246-318)||(31959692-31959764)
chr2 (246-318)||(39029752-39029824)
chr2 (3-65)||(3935353-3935413)
chr2 (246-317)||(18424417-18424488)
chr2 (246-324)||(41197260-41197338)
chr2 (255-324)||(3635356-3635425)
chr2 (246-318)||(9496037-9496109)
chr2 (246-317)||(23997773-23997844)
chr2 (246-324)||(9996659-9996737)
chr2 (282-324)||(19224988-19225030)
chr2 (245-298)||(30743699-30743752)
chr2 (246-318)||(19336932-19337004)
chr2 (245-324)||(6237786-6237865)
chr2 (247-318)||(12882084-12882155)
chr2 (258-317)||(36616871-36616930)
chr2 (246-324)||(38328403-38328479)
chr2 (253-324)||(43573163-43573234)
chr2 (282-324)||(12474960-12475002)
chr2 (258-324)||(21834737-21834803)
chr2 (246-324)||(45543106-45543183)
chr2 (246-323)||(26670939-26671016)
chr2 (3-36)||(38978381-38978414)
chr2 (280-324)||(3720448-3720492)
chr2 (246-318)||(6219136-6219208)
chr2 (258-318)||(36650625-36650685)
chr2 (260-324)||(39709234-39709298)
[»] scaffold0024 (1 HSPs)
scaffold0024 (246-324)||(82889-82967)
[»] chr8 (40 HSPs)
chr8 (246-324)||(36545320-36545398)
chr8 (246-324)||(11523756-11523834)
chr8 (246-324)||(12491171-12491249)
chr8 (246-324)||(44529396-44529474)
chr8 (246-324)||(25473436-25473514)
chr8 (246-324)||(36565274-36565352)
chr8 (248-318)||(44047571-44047641)
chr8 (246-318)||(42469766-42469838)
chr8 (3-65)||(1668183-1668243)
chr8 (3-65)||(16658898-16658958)
chr8 (246-324)||(36394981-36395060)
chr8 (3-65)||(38521207-38521267)
chr8 (246-324)||(42854037-42854115)
chr8 (246-318)||(40813495-40813567)
chr8 (245-312)||(2027700-2027767)
chr8 (246-324)||(15215445-15215523)
chr8 (258-324)||(45419418-45419484)
chr8 (246-324)||(14742115-14742190)
chr8 (246-318)||(25300270-25300342)
chr8 (246-309)||(39947028-39947091)
chr8 (246-320)||(18125343-18125416)
chr8 (246-317)||(12025948-12026022)
chr8 (246-318)||(29520820-29520892)
chr8 (246-317)||(30559864-30559935)
chr8 (246-325)||(43904697-43904776)
chr8 (246-324)||(490506-490584)
chr8 (246-324)||(2216458-2216535)
chr8 (246-324)||(21121317-21121394)
chr8 (258-324)||(23492217-23492283)
chr8 (246-299)||(25288935-25288988)
chr8 (247-324)||(26363660-26363735)
chr8 (3-65)||(22014913-22014973)
chr8 (258-324)||(14459078-14459144)
chr8 (284-318)||(36042407-36042441)
chr8 (268-325)||(10668529-10668586)
chr8 (258-322)||(2966972-2967036)
chr8 (3-35)||(6786516-6786548)
chr8 (246-318)||(8932874-8932946)
chr8 (258-318)||(30748646-30748706)
chr8 (280-324)||(36143546-36143590)
[»] chr6 (27 HSPs)
chr6 (246-324)||(28085547-28085625)
chr6 (246-324)||(34143798-34143876)
chr6 (246-324)||(34156414-34156492)
chr6 (247-319)||(5081012-5081084)
chr6 (248-324)||(31819004-31819080)
chr6 (246-318)||(32756092-32756164)
chr6 (246-324)||(12890746-12890824)
chr6 (246-324)||(34934863-34934941)
chr6 (246-317)||(5631993-5632064)
chr6 (246-325)||(21351869-21351948)
chr6 (246-324)||(608332-608410)
chr6 (246-324)||(3206492-3206570)
chr6 (246-314)||(14030966-14031034)
chr6 (246-318)||(35043480-35043552)
chr6 (246-325)||(30031427-30031506)
chr6 (246-324)||(9706941-9707019)
chr6 (246-324)||(5258181-5258259)
chr6 (246-314)||(33497130-33497198)
chr6 (282-325)||(1615255-1615298)
chr6 (246-324)||(10098929-10099005)
chr6 (247-299)||(24665983-24666035)
chr6 (246-318)||(30679567-30679639)
chr6 (284-318)||(30789113-30789147)
chr6 (271-324)||(12119676-12119729)
chr6 (258-318)||(3210547-3210607)
chr6 (246-318)||(5096005-5096077)
chr6 (246-318)||(6055810-6055882)
[»] chr1 (48 HSPs)
chr1 (246-324)||(22090267-22090345)
chr1 (246-318)||(15086093-15086165)
chr1 (247-315)||(24020309-24020377)
chr1 (246-324)||(1210916-1210994)
chr1 (246-324)||(25979264-25979342)
chr1 (246-324)||(30202163-30202241)
chr1 (246-324)||(34792382-34792460)
chr1 (246-324)||(49347426-49347504)
chr1 (246-324)||(37311788-37311866)
chr1 (246-324)||(39318300-39318378)
chr1 (245-324)||(9592904-9592983)
chr1 (247-325)||(27520239-27520317)
chr1 (246-324)||(52921251-52921329)
chr1 (246-318)||(4001494-4001566)
chr1 (246-318)||(8391943-8392015)
chr1 (246-314)||(8672089-8672157)
chr1 (246-314)||(32230997-32231065)
chr1 (245-325)||(43240411-43240491)
chr1 (246-318)||(51602227-51602299)
chr1 (246-324)||(4029293-4029371)
chr1 (246-324)||(4707254-4707331)
chr1 (246-324)||(38807704-38807782)
chr1 (246-324)||(696440-696519)
chr1 (246-325)||(10200338-10200417)
chr1 (246-324)||(32079210-32079286)
chr1 (246-317)||(51440805-51440876)
chr1 (246-323)||(4415520-4415597)
chr1 (268-325)||(44751677-44751734)
chr1 (268-324)||(44941809-44941865)
chr1 (246-318)||(48865746-48865818)
chr1 (2-61)||(6165022-6165081)
chr1 (281-324)||(28533673-28533716)
chr1 (246-324)||(32082789-32082868)
chr1 (272-325)||(5113940-5113993)
chr1 (246-319)||(16142018-16142091)
chr1 (246-323)||(19936631-19936708)
chr1 (247-324)||(41560401-41560478)
chr1 (2-58)||(16764513-16764569)
chr1 (246-324)||(46423249-46423324)
chr1 (245-324)||(37462909-37462987)
chr1 (2-56)||(10801546-10801600)
chr1 (260-318)||(12930350-12930408)
chr1 (282-324)||(29577459-29577501)
chr1 (268-318)||(42337749-42337799)
chr1 (267-324)||(28090727-28090784)
chr1 (245-298)||(44905415-44905468)
chr1 (258-318)||(5338896-5338956)
chr1 (280-324)||(39123401-39123445)
[»] scaffold0018 (1 HSPs)
scaffold0018 (246-324)||(31639-31717)
[»] chr7 (52 HSPs)
chr7 (246-324)||(11594131-11594209)
chr7 (246-324)||(12841308-12841386)
chr7 (246-324)||(34869591-34869669)
chr7 (246-324)||(37618116-37618194)
chr7 (246-324)||(45836515-45836593)
chr7 (246-315)||(36869286-36869355)
chr7 (247-324)||(43491480-43491557)
chr7 (246-318)||(49029447-49029519)
chr7 (245-324)||(48919282-48919361)
chr7 (246-324)||(27648951-27649029)
chr7 (246-324)||(31682635-31682713)
chr7 (246-324)||(35906234-35906312)
chr7 (246-324)||(38900128-38900206)
chr7 (246-324)||(39906405-39906483)
chr7 (246-324)||(40979961-40980039)
chr7 (246-324)||(43281845-43281923)
chr7 (246-323)||(21078088-21078165)
chr7 (245-324)||(2885755-2885834)
chr7 (246-324)||(22349791-22349869)
chr7 (246-324)||(29650555-29650633)
chr7 (246-324)||(36652163-36652241)
chr7 (247-324)||(6375040-6375117)
chr7 (247-324)||(34035187-34035264)
chr7 (246-323)||(38607163-38607240)
chr7 (246-318)||(15682345-15682417)
chr7 (245-325)||(33349838-33349918)
chr7 (246-324)||(32631735-32631813)
chr7 (246-324)||(46355889-46355967)
chr7 (246-298)||(13859067-13859119)
chr7 (245-317)||(31859045-31859117)
chr7 (258-318)||(45601659-45601719)
chr7 (251-318)||(33073105-33073172)
chr7 (246-324)||(44855207-44855283)
chr7 (262-324)||(28208361-28208423)
chr7 (254-324)||(31681053-31681123)
chr7 (251-324)||(7273276-7273349)
chr7 (246-318)||(35559032-35559104)
chr7 (255-323)||(44951335-44951403)
chr7 (247-318)||(9210743-9210814)
chr7 (258-324)||(36101810-36101876)
chr7 (246-323)||(24598221-24598298)
chr7 (246-323)||(28627967-28628044)
chr7 (247-324)||(42969870-42969947)
chr7 (246-318)||(14057649-14057721)
chr7 (246-318)||(14367677-14367749)
chr7 (246-314)||(35922424-35922492)
chr7 (247-318)||(36239835-36239906)
chr7 (246-324)||(40415178-40415256)
chr7 (282-319)||(39812145-39812182)
chr7 (247-311)||(21517426-21517490)
chr7 (282-318)||(24777168-24777204)
chr7 (246-298)||(37976406-37976458)
[»] chr5 (37 HSPs)
chr5 (246-324)||(10639473-10639551)
chr5 (246-324)||(29816553-29816631)
chr5 (246-318)||(34273184-34273256)
chr5 (246-324)||(2915529-2915606)
chr5 (246-324)||(4496555-4496633)
chr5 (246-324)||(12492417-12492495)
chr5 (246-324)||(28976892-28976970)
chr5 (246-324)||(38685138-38685216)
chr5 (246-324)||(1287612-1287690)
chr5 (246-324)||(3302015-3302093)
chr5 (246-324)||(13561419-13561497)
chr5 (246-324)||(14911343-14911421)
chr5 (246-324)||(16913916-16913994)
chr5 (255-324)||(30213755-30213824)
chr5 (246-318)||(2075512-2075584)
chr5 (3-65)||(3174242-3174302)
chr5 (246-324)||(20456944-20457022)
chr5 (248-324)||(5558314-5558390)
chr5 (246-324)||(418067-418145)
chr5 (246-324)||(1275435-1275513)
chr5 (246-324)||(24178681-24178759)
chr5 (246-311)||(42504293-42504358)
chr5 (246-324)||(16347413-16347489)
chr5 (247-318)||(28276410-28276481)
chr5 (246-317)||(36215659-36215730)
chr5 (247-318)||(38501457-38501528)
chr5 (246-295)||(2552953-2553002)
chr5 (246-298)||(28053-28105)
chr5 (246-318)||(2393048-2393120)
chr5 (246-322)||(31220554-31220629)
chr5 (258-317)||(14667954-14668013)
chr5 (246-324)||(26884722-26884801)
chr5 (272-318)||(38657040-38657086)
chr5 (246-324)||(39040927-39041005)
chr5 (247-292)||(14665886-14665931)
chr5 (3-51)||(18739398-18739444)
chr5 (258-322)||(41808105-41808169)
[»] chr3 (47 HSPs)
chr3 (246-324)||(12096738-12096816)
chr3 (246-324)||(52138971-52139049)
chr3 (245-318)||(28245607-28245680)
chr3 (246-324)||(52156117-52156195)
chr3 (246-324)||(53519751-53519829)
chr3 (246-318)||(51447756-51447828)
chr3 (246-318)||(54279191-54279263)
chr3 (246-325)||(35033317-35033396)
chr3 (246-324)||(22243-22321)
chr3 (246-324)||(5169003-5169081)
chr3 (246-324)||(48508406-48508484)
chr3 (253-323)||(48953453-48953523)
chr3 (246-324)||(53262312-53262390)
chr3 (253-318)||(47555371-47555436)
chr3 (246-318)||(25191548-25191620)
chr3 (249-324)||(47233629-47233704)
chr3 (248-324)||(38060887-38060963)
chr3 (246-324)||(49042107-49042186)
chr3 (246-324)||(311342-311420)
chr3 (250-324)||(2133645-2133719)
chr3 (250-324)||(38850296-38850370)
chr3 (246-324)||(54128550-54128628)
chr3 (268-324)||(7895913-7895969)
chr3 (249-325)||(17022704-17022780)
chr3 (246-318)||(29601063-29601135)
chr3 (246-314)||(39600724-39600792)
chr3 (250-325)||(41842555-41842630)
chr3 (246-316)||(15296078-15296148)
chr3 (268-318)||(33271949-33271999)
chr3 (246-324)||(43694804-43694882)
chr3 (3-52)||(52893509-52893556)
chr3 (258-324)||(54365008-54365074)
chr3 (246-299)||(54422901-54422954)
chr3 (277-325)||(23534602-23534650)
chr3 (284-324)||(31566194-31566234)
chr3 (258-318)||(39208791-39208851)
chr3 (247-318)||(19676120-19676191)
chr3 (3-52)||(21239513-21239560)
chr3 (258-324)||(40106653-40106719)
chr3 (248-293)||(38431021-38431066)
chr3 (246-299)||(54425023-54425076)
chr3 (3-65)||(2338797-2338855)
chr3 (271-323)||(4472421-4472473)
chr3 (246-298)||(30294180-30294232)
chr3 (284-324)||(40273238-40273278)
chr3 (258-318)||(40991614-40991674)
chr3 (269-313)||(48532151-48532195)
[»] scaffold0570 (1 HSPs)
scaffold0570 (246-318)||(987-1059)
[»] scaffold0157 (1 HSPs)
scaffold0157 (246-318)||(25571-25643)
[»] scaffold0036 (1 HSPs)
scaffold0036 (246-324)||(4314-4392)
[»] scaffold1318 (1 HSPs)
scaffold1318 (246-324)||(502-580)
[»] scaffold0041 (1 HSPs)
scaffold0041 (246-323)||(16749-16826)
[»] scaffold0393 (1 HSPs)
scaffold0393 (3-65)||(11150-11210)
[»] scaffold0692 (1 HSPs)
scaffold0692 (246-324)||(4807-4885)
[»] scaffold0045 (1 HSPs)
scaffold0045 (246-321)||(86645-86720)
[»] scaffold0168 (1 HSPs)
scaffold0168 (267-324)||(28922-28979)
[»] scaffold0199 (1 HSPs)
scaffold0199 (246-318)||(14754-14826)
[»] scaffold0285 (1 HSPs)
scaffold0285 (2-58)||(8359-8415)
[»] scaffold0054 (1 HSPs)
scaffold0054 (2-58)||(2940-2996)
[»] scaffold0113 (1 HSPs)
scaffold0113 (247-324)||(11582-11657)


Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 33754006 - 33753782
Alignment:
Q  1 ttcttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttttgaaaataaaaatccatacttgcaatttctgtagt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  33754006 ttcttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagctcttttgaaaataaaaa-ccatactttcaatttctgtagt 33753908  T
Q  101 actgttattgttaatatggctttatgcaaaattgcaaatctgacactttcactttcagttttatggagtaaatgtaattccgtaagt--gctttatggga 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||    
T  33753907 actgttattgttaatatggctttatgcaaaattgcaaatctgacactttcactttcagttttatggagtaaatgtaatttcgtaagtgcgctttttggga 33753808  T
Q  199 cccctaattgttattaaaactgttat 224  Q
    |||||||||||| |||||||||||||    
T  33753807 cccctaattgttgttaaaactgttat 33753782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 6957769 - 6957841
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  6957769 gatttagaggtcaatgagttggatccaaatttgatgtatgatagaacactatgacgtcatttgatccatgtag 6957841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 8286610 - 8286682
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  8286610 gatttagaggtcaatgagttggatccaaatttggtttatgatagaacactatgacgtcatttgatccatgtag 8286682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 7947108 - 7947186
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||    
T  7947108 gatttagaggtcaatcagttggatccaaatttgatttatgatagaacactatcatgtaatttgatccatgtagccgacc 7947186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 53707965 - 53708042
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||| |||||||||||||| ||||||||    
T  53707965 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttgatccatttagtcgac 53708042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 33227380 - 33227452
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  33227380 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttgatccatgtag 33227452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 56375461 - 56375540
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    ||||||||||| |||||||| |||||||||||| | |||||||||||||||||| |||||||||||||||||| ||||||    
T  56375461 gatttagaggtgaatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttgatccatgtagccgacct 56375540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 4441024 - 4441102
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  4441024 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 4441102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 31959925 - 31959847
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  31959925 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 31959847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 39708604 - 39708682
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||||  || |||||||||||||||||||||    
T  39708604 gatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatgtcgtaatttgatccatgtagtcgacc 39708682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 47265305 - 47265227
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||  ||| ||||||||||||||| ||||||    
T  47265305 atttagaggtcaatgagttggatccaaatttgatctatgatagaacactatagtgtaatttgatccatgtagccgacct 47265227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 52569626 - 52569548
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  52569626 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 52569548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 12494834 - 12494906
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||| ||||||| ||||||||||    
T  12494834 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttaatccatgtag 12494906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 23906408 - 23906336
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  ||||||||||||||||||    
T  23906408 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtag 23906336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 1777128 - 1777050
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||| ||||  |||||||||||||||||| |||||    
T  1777128 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacagtatggcgtcatttgatccatgtagccgacc 1777050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 27450290 - 27450213
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||||||||  |||||||||||||||||| |||||    
T  27450290 gatttagaggtcaatgagttggatccaaatatgattt-tgatagaacactatggcgtcatttgatccatgtagccgacc 27450213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 33190959 - 33190881
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||||||  ||||||||||| | |||||||||||||||||| ||||||||| |||||||| |||||    
T  33190959 gatttagaggtcaatgagttgaatccaaatttggtgtatgatagaacactatgacgtcatttgacccatgtagccgacc 33190881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 48622654 - 48622576
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  ||||||| |||||||||| |||||    
T  48622654 gatttagaggtcaatgagtttgatccaaatttggtgtatgatagaacactatggcgtcatttaatccatgtagccgacc 48622576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 50287133 - 50287210
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||||||||||  | ||||||||||||||||||||||    
T  50287133 gatttagaggtcaatgagttggatctaaatttgatgtatgatagaacactatg-ggccatttgatccatgtagtcgacc 50287210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 43434094 - 43434171
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcga 322  Q
    ||||||||||||||||||||  |||||||||||||| || |||||||||||| |  ||||||||||||||||||||||    
T  43434094 tgatttagaggtcaatgagtcggatccaaatttgatgtaggatagaacactacggcgtcatttgatccatgtagtcga 43434171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 1793633 - 1793705
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| |||||||| || ||||||| |||||||    
T  1793633 gatttagaggtcaatgagttggatccaaatatgatttatgatagagcactatgacgtaatttgattcatgtag 1793705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 247 - 315
Target Start/End: Complemental strand, 19154973 - 19154905
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatg 315  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||  || ||||||||||||    
T  19154973 atttagaggtcaatgagttggatccaaatttggtttatgatagaacactatggcgttatttgatccatg 19154905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 19969358 - 19969430
Alignment:
Q  252 gaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||||  |||||||||||||||||| |||||    
T  19969358 gaggtcaatgagttggatccaaatttggtttatgatagaacgctatggcgtcatttgatccatgtagccgacc 19969430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 21237029 - 21237101
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||| |||||||    
T  21237029 gatttagaggtcaatgagttggatccaaatttggtatatgatagaacactatggcgtcatttgatacatgtag 21237101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 23218261 - 23218201
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttt 65  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  23218261 cttcaattatgattatgatttgatgattacatg--ttctttagttgattgccatgagttcttt 23218201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 324
Target Start/End: Original strand, 28236352 - 28236431
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| | |||| ||| |||||||| |||||| |||||    
T  28236352 tgatttagaggtcaatgagttggatccaaatttggtttatgatagaatattatggtgtaatttgatctatgtagccgacc 28236431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 436400 - 436478
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||||||  ||||||||||| | |||||||||||||||||   ||||||||||||||||| |||||    
T  436400 gatttagaggtcaatgagttgaatccaaatttggtgtatgatagaacactatggcatcatttgatccatgtagccgacc 436478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 21528459 - 21528537
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||| ||||| || ||| ||||||||||||||| || |||||||||||||||| |||||    
T  21528459 gatttagaggtcaatgagttggattcaaatatggtttttgatagaacactatggtggcatttgatccatgtagccgacc 21528537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 32479209 - 32479287
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||| |||| || ||| |||||||||||||||  |||||||||||||||||| |||||    
T  32479209 gatttagaggtcaatgagttggatcaaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgacc 32479287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 46582936 - 46582864
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||| ||||||||||||| |||||||||||| | ||||||||||| |||||  ||||||||||||||||||    
T  46582936 gatttaaaggtcaatgagttggatccaaatttggtgtatgatagaaccctatggcgtcatttgatccatgtag 46582864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 48174204 - 48174132
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | ||||||| |||| ||||  ||||||||||||||||||    
T  48174204 gatttagaggtcaatgagttggatccaaatttggtgtatgataaaacattatggcgtcatttgatccatgtag 48174132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 51811379 - 51811311
Alignment:
Q  256 tcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||| ||||||||| || ||| |||||||||||||||| |||||||||||||||||| |||||    
T  51811379 tcaatgagtttgatccaaatatggtttttgatagaacactatgacgtcatttgatccatgtagccgacc 51811311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 13740293 - 13740233
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttt 65  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||| |||||||||||||    
T  13740293 cttcaattatgattatgatttgatgattacat--gttctttagttgatttccatgagttcttt 13740233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 26037616 - 26037538
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| |||||||| ||||||||| || |||||||||||||||||||  || ||| ||||||||||| |||||    
T  26037616 gatttagaggtgaatgagttggatccaaatatggtttatgatagaacactatggcgtaattggatccatgtagccgacc 26037538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 37798022 - 37798099
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    |||||||| |||||||||||  |||||||| || |||||||||||||| ||||| ||||||||||| |||||| ||||    
T  37798022 gatttagaagtcaatgagttgaatccaaatatggtttatgatagaacaatatgacgtcatttgatcaatgtagccgac 37798099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 50679675 - 50679736
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcattt 307  Q
    |||||||||||||||||||| |||||||||||| ||||||||| || ||||||| |||||||    
T  50679675 gatttagaggtcaatgagttggatccaaatttggtttatgataaaatactatgacgtcattt 50679736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 314
Target Start/End: Original strand, 16003098 - 16003165
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccat 314  Q
    ||||||||||||||||||| |||| |||| |||||||||||| |||||||||| || |||| ||||||    
T  16003098 atttagaggtcaatgagttggatctaaatatgatttatgataaaacactatgacgtaatttaatccat 16003165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 21355945 - 21356005
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttt 65  Q
    |||||||| ||||| |||||||||||||||||  ||||||||||||||| |||||||||||||    
T  21355945 cttcaattctgattctgatttgatgattacat--gttctttagttgatttccatgagttcttt 21356005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 4548195 - 4548265
Alignment:
Q  248 tttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||||| |||| |||| ||||||| ||||||||||||||||| |  || |||||||||||||||    
T  4548195 tttagaggtcaataagttggatctaaatttggtttatgatagaacactaaggcgtaatttgatccatgtag 4548265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 37773562 - 37773484
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||| |||||||||||||| |||||| ||||| ||||||||||||||||||||  | |||||||| || ||| |||||    
T  37773562 gatttggaggtcaatgagttggatccagatttggtttatgatagaacactatgacataatttgatctatatagccgacc 37773484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 55388310 - 55388244
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||| |||| ||||||||||||||||| | || ||| ||||||||||||| |||||||    
T  55388310 aatgagttagatcgaaatatgatttatgatagaacattgtggtgtaatttgatccatgttgtcgacc 55388244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 20192204 - 20192269
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatc 311  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||| ||||| || ||||||||    
T  20192204 gatttagaggtcagtgggttggatccaaatttgatgtatgatagaacattatgacgttatttgatc 20192269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 53518434 - 53518365
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatg 315  Q
    ||||||||||| |||||||| |||| |||| || |||||||||||||||||||  || ||||||||||||    
T  53518434 gatttagaggttaatgagttggatctaaatatggtttatgatagaacactatggcgtaatttgatccatg 53518365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 20601756 - 20601692
Alignment:
Q  253 aggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgta 317  Q
    ||||||||||||| ||| ||||| ||||||||||||||||| ||||| || ||||||| ||||||    
T  20601756 aggtcaatgagttggattcaaatatgatttatgatagaacattatgacgtaatttgattcatgta 20601692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 51421901 - 51421973
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||| ||||| || ||||||||  || |||||||||||||| ||||| || |||||||||||||||    
T  51421901 gatttagaggttaatgaattggatccaaaaatggtttatgatagaacattatgacgtaatttgatccatgtag 51421973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 45144050 - 45144097
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattg 52  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  45144050 cttcaattatgattatgatttgatgattacat--gttctttagttgattg 45144097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 45152819 - 45152866
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattg 52  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  45152819 cttcaattatgattatgatttgatgattacat--gttctttagttgattg 45152866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 27983364 - 27983436
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||| ||||||| || |||| |||| ||  || | |||||||||||||| ||||||||||||||||||    
T  27983364 gatttagagttcaatgaattggatcaaaatatggatttttatagaacactatgacgtcatttgatccatgtag 27983436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 34208378 - 34208302
Alignment:
Q  248 tttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||| | |||||||| ||||||||| || |||||||||||||| ||||  |  |||||||||||||| ||||||    
T  34208378 tttagagattaatgagttggatccaaatatggtttatgatagaacattatggcgcaatttgatccatgtactcgacc 34208302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 56225241 - 56225317
Alignment:
Q  248 tttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||| ||| | || ||||||||| || | | | ||||||||||||||||| ||||||||||||| |||||||    
T  56225241 tttagaggttaataaatttgatccaaatatggtattttatagaacactatgatgtaatttgatccatgtggtcgacc 56225317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 19062010 - 19061968
Alignment:
Q  282 tatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||  |||||||||||||||||| |||||    
T  19062010 tatgatagaacactatggcgtcatttgatccatgtagccgacc 19061968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 20591416 - 20591339
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||| ||||| ||  |||||||||||||| |||| || ||||||| ||| || ||||||    
T  20591416 gatttagaggtcaatgagttggattcaaatatg-gttatgatagaacacaatgacgtaatttgattcatatattcgacc 20591339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 20821119 - 20821073
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaac 292  Q
    |||||| ||||||||||||| ||| ||||| ||||||||||||||||    
T  20821119 gatttaaaggtcaatgagttggattcaaatatgatttatgatagaac 20821073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 298
Target Start/End: Complemental strand, 41729551 - 41729509
Alignment:
Q  256 tcaatgagttagatccaaatttgatttatgatagaacactatg 298  Q
    |||||||||| ||||||||| || |||||||||||||||||||    
T  41729551 tcaatgagttggatccaaatatggtttatgatagaacactatg 41729509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 55007917 - 55007995
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||| | |||||||| || | |||| || ||||||||||| || ||||| || ||||||||||||||| |||||    
T  55007917 gatttagagattaatgagttggaccgaaatatggtttatgatagatcattatgacgtaatttgatccatgtagccgacc 55007995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 324
Target Start/End: Original strand, 35690443 - 35690520
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||| |||||||| |||||||    | |||||||||||||| ||||  || ||||||||||||||| |||||    
T  35690443 atttagaggttaatgagtttgatccaatcagggtttatgatagaacattatggcgtaatttgatccatgtagccgacc 35690520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 50862815 - 50862852
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgattta 283  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  50862815 gatttagaggtcaatgagttggatccaaatttggttta 50862852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 16875839 - 16875791
Alignment:
Q  270 ccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||| ||||||||||||||||| ||| |||| | |||||||||||||    
T  16875839 ccaaatatgatttatgatagaacattattatgtaacttgatccatgtag 16875791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 25575007 - 25575067
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||| |||| |||| || |||||||||||||| | || ||| |||||||||||||||    
T  25575007 aatgagttggatcgaaatatggtttatgatagaacattgtggtgtaatttgatccatgtag 25575067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 28486092 - 28486164
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||| | |||||||| ||||||||| |||||||  || ||||| ||||  || |||||||||||||||    
T  28486092 gatttagagattaatgagttggatccaaatatgatttacaattgaacaatatggcgtaatttgatccatgtag 28486164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 28550566 - 28550494
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||| |||||||| ||||||||| || ||| ||||||||  ||||| | | |||||||| ||||||    
T  28550566 gatttagaggttaatgagtttgatccaaatatggtttttgatagaaagctatgttataatttgatcaatgtag 28550494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 49939807 - 49939767
Alignment:
Q  284 tgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||  |||||||||||||||||| |||||    
T  49939807 tgatagaacactatggcgtcatttgatccatgtagccgacc 49939767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 54785229 - 54785197
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatg 35  Q
    |||||||||||||| ||||||||||||||||||    
T  54785229 cttcaattatgattctgatttgatgattacatg 54785197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32339618 - 32339720
Alignment:
Q  1 ttcttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttttgaaaataaaaatccatacttgcaatttctgtagt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||  | |||| |||||    
T  32339618 ttcttcaattatgattctgatttgatgattacatgagttctttagttgatttccataagttgttttgaaaataaaaatccatacttttagtttcggtagt 32339717  T
Q  101 act 103  Q
    |||    
T  32339718 act 32339720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 12734871 - 12734949
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||||||||| ||| |||||||||||||||||||||    
T  12734871 gatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggtgtaatttgatccatgtagtcgacc 12734949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 28508849 - 28508927
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||||||||||||||||| |||||    
T  28508849 gatttagaggtcaatgagttggatccaaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgacc 28508927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 227360 - 227438
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  227360 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 227438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 3866243 - 3866321
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||||||  ||||||||||||||||| |||||    
T  3866243 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacatcatttgatccatgtagccgacc 3866321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 8180951 - 8181029
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||||  ||||||||||||||||||| |||||    
T  8180951 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatagtgtcatttgatccatgtagccgacc 8181029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 30306203 - 30306281
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||||||||||  |||||||||||||||||| |||||    
T  30306203 gatttagaggtcattgagttggatccaaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgacc 30306281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 36183622 - 36183700
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||| |||||    
T  36183622 gatttagaagtcaatgagttggatccaaatttgatgtatgatagaacactatggtgccatttgatccatgtagccgacc 36183700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 7326272 - 7326199
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||||||||||  ||||||||||||||||||    
T  7326272 tgatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtag 7326199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 25834849 - 25834927
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||| ||  |||||||||||||||||| |||||    
T  25834849 gatttagaggtcaatgagttggatccaaatatggtttatgatagaacactgtggcgtcatttgatccatgtagccgacc 25834927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 38430055 - 38430133
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||| |||||||||||||||  |||||||||||||||||| |||||    
T  38430055 gatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgacc 38430133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 38452797 - 38452719
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | ||||||| ||||||||| ||||||| ||||||||||| |||||    
T  38452797 gatttagaggtcaatgagttggatccaaatttggtgtatgataaaacactatggtgtcattcgatccatgtagccgacc 38452719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 45367736 - 45367666
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgt 316  Q
    ||||||||||| |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||    
T  45367736 gatttagaggtaaatgagttggatccaaatatgatttttgatagaacactatgacgtcatttgatccatgt 45367666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 11992219 - 11992147
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||| ||||  || |||||||||||||||    
T  11992219 gatttagaggtcaatgagttagatccaaatatgatttttgatagaacattatggcgttatttgatccatgtag 11992147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 2610759 - 2610830
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgta 317  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  || ||||||||||||||    
T  2610759 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgttatttgatccatgta 2610830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 451759 - 451681
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||| |||||| |||||||||||  | |||||||||||||||||  |||||||||||||||||| |||||    
T  451759 gatttagaggtcagtgagttggatccaaatttagtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 451681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 3243764 - 3243686
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||| |||| | |||||||||||||||||  ||||||||||||| |||| |||||    
T  3243764 gatttagaggtcaatgagttggatccaagtttggtgtatgatagaacactatggcgtcatttgatccaggtagccgacc 3243686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 35643119 - 35643197
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||||||  |||||| || ||||||| |||||    
T  35643119 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacatcatttaatacatgtagccgacc 35643197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 247 - 324
Target Start/End: Original strand, 4807767 - 4807844
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||||| |||||||||| | | || ||||||||||||||  |||||||||||||||||| |||||    
T  4807767 atttagaggtcaatgagttggatccaaattcggtgtacgatagaacactatggcgtcatttgatccatgtagccgacc 4807844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 31959692 - 31959764
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||||   | |||||||||||||||    
T  31959692 gatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcataatttgatccatgtag 31959764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 39029752 - 39029824
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| ||||||||| || ||| |||||||||| ||||  ||||||||||||||||||    
T  39029752 gatttagaggtcaatgagttggatccaaatatggtttttgatagaacattatggcgtcatttgatccatgtag 39029824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 3935413 - 3935353
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttt 65  Q
    |||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||    
T  3935413 cttcaattatgattataatttgatgattacatg--ttctttagttgattgccatgagttcttt 3935353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 317
Target Start/End: Complemental strand, 18424488 - 18424417
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgta 317  Q
    ||||||||| ||||| |||| ||||| ||| || |||||||||||||||||||| |||||||||||||||||    
T  18424488 gatttagagatcaataagtttgatccgaatatggtttatgatagaacactatgacgtcatttgatccatgta 18424417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 41197338 - 41197260
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||| ||||| ||||| ||| || ||| |||||||||| ||||  ||||||||||||||||||||||||    
T  41197338 gatttagaggtcaacgagttggatcccaatatggtttttgatagaacattatggcgtcatttgatccatgtagtcgacc 41197260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 3635425 - 3635356
Alignment:
Q  255 gtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| ||||||||| || ||| |||||||||||||||  |||||||||||||||||| |||||    
T  3635425 gtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgacc 3635356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 9496037 - 9496109
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||| |||||||| ||||||||| || |||||||||||||| ||||  || |||||||||||||||    
T  9496037 gatttagaggttaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtag 9496109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 23997773 - 23997844
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgta 317  Q
    |||||||||||||||||||| ||||||||| || ||| ||||| |||||||||  || ||||||| ||||||    
T  23997773 gatttagaggtcaatgagttggatccaaatatggtttttgataaaacactatggcgttatttgattcatgta 23997844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 9996737 - 9996659
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||| ||||| ||||||||| || ||||||||  |||||||||   | ||||||||||||||| |||||    
T  9996737 gatttagaggtcaacgagttggatccaaatatggtttatgattaaacactatggcataatttgatccatgtagccgacc 9996659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 324
Target Start/End: Original strand, 19224988 - 19225030
Alignment:
Q  282 tatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  19224988 tatgatagaacactatgatgtcgtttgatccatgtagccgacc 19225030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 298
Target Start/End: Original strand, 30743699 - 30743752
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatg 298  Q
    |||||||||||||||||||||  |||||||| |||||||| |||||||| ||||    
T  30743699 tgatttagaggtcaatgagttgaatccaaatatgatttataatagaacaatatg 30743752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 19337004 - 19336932
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||| | |||||||| |||| |||| || |||||||||||||| ||||  || |||||||||||||||    
T  19337004 gatttagagattaatgagttggatcgaaatatggtttatgatagaacattatggcgtaatttgatccatgtag 19336932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 324
Target Start/End: Complemental strand, 6237865 - 6237786
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||| |||| ||| ||||| |  |||||||||||||||||||   | |||||||| || |||||||||    
T  6237865 tgatttagaggtcaatcagttggattcaaatatagtttatgatagaacactatgggatgatttgatctatatagtcgacc 6237786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 12882155 - 12882084
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||| |||||||| ||||||||| || ||| |||||||||| | ||  || |||||||||||||||    
T  12882155 atttagaggttaatgagttggatccaaatatggtttgtgatagaacattttggcgtaatttgatccatgtag 12882084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 36616871 - 36616930
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgta 317  Q
    ||||||||||||| |||| |  |||||||||||||||||| |||| ||||||||| ||||    
T  36616871 aatgagttagatcaaaatatagtttatgatagaacactataatgtaatttgatccgtgta 36616930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 38328479 - 38328403
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||    |||||||||||| |  ||||||||||||||||   ||||||||||||||||| |||||    
T  38328479 gatttagaggtcaatgaag--gatccaaatttggtgcatgatagaacactatggcttcatttgatccatgtagccgacc 38328403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 324
Target Start/End: Complemental strand, 43573234 - 43573163
Alignment:
Q  253 aggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||| |||||||| ||||||||| ||||||||||| ||||  ||||  || ||||||||||||||| |||||    
T  43573234 aggttaatgagttggatccaaatatgatttatgatcgaacgttatggcgtaatttgatccatgtagccgacc 43573163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 12475002 - 12474960
Alignment:
Q  282 tatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||  |||||||||||||||||| |||||    
T  12475002 tatgatagaacactatggcgtcatttgatccatgtagccgacc 12474960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 21834737 - 21834803
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| |||| ||||||| |||||||||||||| |||||  |  |||| |||||||||||||||    
T  21834737 aatgagttggatctaaatttggtttatgatagaacaatatgacatattttggtccatgtagtcgacc 21834803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 45543183 - 45543106
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| |||||||| ||||||||| || |||||||||||||| ||||  ||  ||||||| |||||| |||||    
T  45543183 gatttagaggt-aatgagttcgatccaaatatggtttatgatagaacattatggcgtactttgatctatgtagccgacc 45543106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 26670939 - 26671016
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    ||||||||| | |||||||| || | |||| ||||||||||||||| |  ||| ||| ||||||||||||||| ||||    
T  26670939 gatttagagattaatgagttggaccaaaatatgatttatgatagaatataatggtgtaatttgatccatgtagccgac 26671016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 38978414 - 38978381
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatga 36  Q
    |||||||||||||| |||||||||||||||||||    
T  38978414 cttcaattatgattatgatttgatgattacatga 38978381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 3720492 - 3720448
Alignment:
Q  280 tttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||| |||| ||| ||||||||||||||| |||||    
T  3720492 tttatgatagaacattatggtgtaatttgatccatgtagccgacc 3720448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 6219136 - 6219208
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||| | | |||||| || | |||| || |||||||||||||| |||| ||| |||||||||||||||    
T  6219136 gatttagagattagtgagttggaccgaaatatggtttatgatagaacattatggtgtaatttgatccatgtag 6219208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 36650625 - 36650685
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||||| |||| |  |||||||||||||||||| | || ||||||||| |||||    
T  36650625 aatgagttagatcaaaatatagtttatgatagaacactataacgtaatttgatccgtgtag 36650685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 324
Target Start/End: Complemental strand, 39709298 - 39709234
Alignment:
Q  260 tgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||| |||| |||| || |||||||| ||||||||||  || ||||||||||||||| |||||    
T  39709298 tgagttggatcaaaatatggtttatgattgaacactatggcgtaatttgatccatgtagccgacc 39709234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 82889 - 82967
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  82889 gatttagaggtcaatgagttggatccaaatatgatttatgatagaacactatgacgtcatttgatccatgtagccgacc 82967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 36545320 - 36545398
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||| |||||||||||||||||| |||||    
T  36545320 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttgatccatgtagccgacc 36545398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 11523834 - 11523756
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  11523834 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 11523756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 12491249 - 12491171
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  12491249 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 12491171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 44529396 - 44529474
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||   ||||||||||||||||| |||||    
T  44529396 gatttagaggtcaatgagttggatccaaatttggtttatgatagaacactatggcatcatttgatccatgtagccgacc 44529474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 25473514 - 25473436
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||||   |||||||||||||||||| |||||    
T  25473514 gatttagaggtcaatgagtttgatccaaatttggtgtatgatagaacactatagcgtcatttgatccatgtagccgacc 25473436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 36565352 - 36565274
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  || ||||||||||||||| |||||    
T  36565352 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgttatttgatccatgtagccgacc 36565274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 44047641 - 44047571
Alignment:
Q  248 tttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| |||  ||||||||||||||||||    
T  44047641 tttagaggtcaatgagttggatccaaatttggtttatgatagaacaccatggcgtcatttgatccatgtag 44047571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 42469838 - 42469766
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| ||||||||| || ||| |||||||||||||||  ||||||||||||||||||    
T  42469838 gatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtag 42469766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 1668183 - 1668243
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttt 65  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  1668183 cttcaattatgattatgatttgatgattacat--gttctttagttgattgccatgagttcttt 1668243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 16658898 - 16658958
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttt 65  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  16658898 cttcaattatgattatgatttgatgattacat--gttctttagttgattgccatgagttcttt 16658958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 36395060 - 36394981
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtca-tttgatccatgtagtcgacc 324  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||  || || |||||||||||||| |||||    
T  36395060 gatttagaggtcaatgagttagatccaaatttggtgtatgatagaacactattgtggcattttgatccatgtagccgacc 36394981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 38521267 - 38521207
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttt 65  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  38521267 cttcaattatgattatgatttgatgattacatg--ttctttagttgattgccatgagttcttt 38521207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 42854115 - 42854037
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||| ||||| |||||||||  |||||||||||||||||| |||||    
T  42854115 gatttagaggtcaatgagttggatccaaatatggtttttgatataacactatggcgtcatttgatccatgtagccgacc 42854037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 40813495 - 40813567
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||||| |||||| |||||||||||| | | ||||||||||||||||  |||||||||||||||||    
T  40813495 gatttagaggtcagtgagttggatccaaatttggtgtgtgatagaacactatgacatcatttgatccatgtag 40813567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 2027700 - 2027767
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatcc 312  Q
    |||||||||||||||||||||| || ||||| || |||||||||||||||||||| | ||||||||||    
T  2027700 tgatttagaggtcaatgagttatattcaaatatggtttatgatagaacactatgacgccatttgatcc 2027767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 15215523 - 15215445
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||| |||||||||| ||||||||| || ||| | |||||||||||||| ||||| |||||||||||| |||||    
T  15215523 gatttagagatcaatgagtttgatccaaatatggtttttaatagaacactatgacgtcatatgatccatgtagccgacc 15215445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 45419418 - 45419484
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| |||||||||||| |||||||||||||| |||| ||| ||||||||||||||| |||||    
T  45419418 aatgagtttgatccaaatttggtttatgatagaacattatggtgtaatttgatccatgtagccgacc 45419484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 14742190 - 14742115
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| ||||||||||| |||||||||   |||| |||||||||||||||  |||||||||||||||||| |||||    
T  14742190 gatttagaagtcaatgagttggatccaaat---atttttgatagaacactatggcgtcatttgatccatgtagccgacc 14742115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 25300270 - 25300342
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| ||||||||| || ||||||||| ||||||||||  | |||||||| ||||||    
T  25300270 gatttagaggtcaatgagttggatccaaatatggtttatgatataacactatgacataatttgatctatgtag 25300342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 39947028 - 39947091
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttga 309  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||| |||||  |||||||||    
T  39947028 gatttagaggtcaatgagttgaatccaaatttggtttatgatagaacgctatggcgtcatttga 39947091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 18125343 - 18125416
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtc 320  Q
    |||||| | ||||||||||| ||||||||| ||||||||||||||| |||||| ||| |||||||| ||||||||    
T  18125343 gatttaaaagtcaatgagttggatccaaatatgatttatgatagaatactatggtgt-atttgatcaatgtagtc 18125416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 12025948 - 12026022
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatga---tgtcatttgatccatgta 317  Q
    ||||||||||||||| |||| ||||||||| || ||| ||||||||||||||||    |||||||||||||||||    
T  12025948 gatttagaggtcaataagttggatccaaatatggtttttgatagaacactatgacgtcgtcatttgatccatgta 12026022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 29520820 - 29520892
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||| | |||||||| ||||||||| || |||||||||||||| ||||  || |||||||||||||||    
T  29520820 gatttagagattaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtag 29520892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 30559864 - 30559935
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgta 317  Q
    ||||||||| | |||||||| |||||| || || |||||||||||||| ||||| || ||||||||||||||    
T  30559864 gatttagagattaatgagttggatccatatatggtttatgatagaacattatgacgtaatttgatccatgta 30559935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 325
Target Start/End: Complemental strand, 43904776 - 43904697
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    ||||||||| | |||||||| |||| |||| || |||||||||||||| ||||  || ||||||||||||||| ||||||    
T  43904776 gatttagagattaatgagttggatctaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgacct 43904697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 490506 - 490584
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||| |  ||||||| ||||||||| || |||||||||||||| ||||  || ||||||||||||||| |||||    
T  490506 gatttagagattgatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgacc 490584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 2216458 - 2216535
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||| |||||||||| ||||| ||| || |||||||||||||| |||  ||| ||||||||||||||| |||||    
T  2216458 gatttagagatcaatgagttggatcctaatatg-tttatgatagaacattatagtgtaatttgatccatgtagccgacc 2216535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 21121317 - 21121394
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| ||||||||||| ||||| ||| || |||||||||||||||||||  || ||||||| ||||||| |||||    
T  21121317 gatttagaagtcaatgagttggatcctaatatggtttatgatagaacactatggcgtaatttgat-catgtagccgacc 21121394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 23492217 - 23492283
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| |||  |||| |||| ||||||||||||||||| |||||||| |||||||||| |||||    
T  23492217 aatgagttggatagaaatatgatatatgatagaacactatggtgtcatttaatccatgtagccgacc 23492283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 25288935 - 25288988
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatga 299  Q
    |||||||||||||||||||| ||||||||| || ||||||||| ||| ||||||    
T  25288935 gatttagaggtcaatgagttggatccaaatatggtttatgatataactctatga 25288988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 324
Target Start/End: Original strand, 26363660 - 26363735
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||| ||||| |||| |||| || ||||||||||||||||  | ||| |||||||||||||||||||||    
T  26363660 atttagaggtcaa-gagttggatctaaatatggtttatgatagaacacttag-tgtaatttgatccatgtagtcgacc 26363735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 22014913 - 22014973
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttt 65  Q
    |||||||||||||| |  ||||||||||||||   |||||||||||||| |||||||||||||    
T  22014913 cttcaattatgattattgtttgatgattacata--ttctttagttgatttccatgagttcttt 22014973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 14459078 - 14459144
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| | |||| || |||||||| ||||| |||| ||| ||||||||||||||| |||||    
T  14459078 aatgagttagaccaaaatatggtttatgatggaacattatggtgtaatttgatccatgtagccgacc 14459144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 318
Target Start/End: Original strand, 36042407 - 36042441
Alignment:
Q  284 tgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||| ||||||||||||||||||    
T  36042407 tgatagaacactatgacgtcatttgatccatgtag 36042441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 10668586 - 10668529
Alignment:
Q  268 atccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    ||||| ||||| | || ||||||||||||||| ||||||||||| |||||| ||||||    
T  10668586 atccatatttggtgtacgatagaacactatgaggtcatttgatcgatgtagccgacct 10668529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 2966972 - 2967036
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcga 322  Q
    ||||| ||||||  |||| |||||| ||||| |||||| |||| ||||||||| |||||||||||    
T  2966972 aatgaattagataaaaatatgatttttgataaaacactgtgatttcatttgattcatgtagtcga 2967036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 6786516 - 6786548
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatg 35  Q
    |||||||| ||||||||||||||||||||||||    
T  6786516 cttcaattctgattttgatttgatgattacatg 6786548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 8932874 - 8932946
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||| |||| |||||||| |||| |||| ||  || ||||| |||||||||  ||||||||||||||||||    
T  8932874 gatttaaaggttaatgagttggatcaaaatatggcttttgataaaacactatggcgtcatttgatccatgtag 8932946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 30748646 - 30748706
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||| |||  |||| |||| ||| || ||||| ||||||||||||||||||||||||    
T  30748646 aatgagttggatagaaatatgatatataattgaacattatgatgtcatttgatccatgtag 30748706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 36143546 - 36143590
Alignment:
Q  280 tttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||| ||||| ||||| |||||||||||| |||||    
T  36143546 tttatgatagaacattatgacgtcatctgatccatgtagccgacc 36143590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 28085547 - 28085625
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||    
T  28085547 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggtgtcatttgatccatgtagccgacc 28085625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 34143876 - 34143798
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  ||||||||||||||||||||||||    
T  34143876 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagtcgacc 34143798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 34156492 - 34156414
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  ||||||||||||||||||||||||    
T  34156492 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagtcgacc 34156414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 5081012 - 5081084
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagt 319  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||||||| | |||||||||||||||||||    
T  5081012 atttagaggtcaatgagttggatacaaatatgatttatgatagaacactataacgtcatttgatccatgtagt 5081084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 31819004 - 31819080
Alignment:
Q  248 tttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  31819004 tttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 31819080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 32756092 - 32756164
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  ||||||||||||||||||    
T  32756092 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtag 32756164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 12890746 - 12890824
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| ||||||||||||||||||||| || |||||||||||||||||||  || ||||||||||||||| |||||    
T  12890746 gatttagacgtcaatgagttagatccaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgacc 12890824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 34934941 - 34934863
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||   ||||||||||||||||| |||||    
T  34934941 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcctcatttgatccatgtagccgacc 34934863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 5631993 - 5632064
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgta 317  Q
    |||||||||||||||||||| ||||||||| || ||| ||||| |||||||||| |||||||||||||||||    
T  5631993 gatttagaggtcaatgagttggatccaaatatggtttttgatataacactatgacgtcatttgatccatgta 5632064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 325
Target Start/End: Complemental strand, 21351948 - 21351869
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    |||||||||||||||||| | ||||||||| |||||| |||||||||||||||| || | ||||||||||||| ||||||    
T  21351948 gatttagaggtcaatgagctggatccaaatatgatttttgatagaacactatgacgttaattgatccatgtagccgacct 21351869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 608332 - 608410
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||| |||||||||| ||||||||| || ||| |||||||| ||||||| |||||||||||||||||| |||||    
T  608332 gatttagagttcaatgagttggatccaaatatggtttttgatagaatactatgacgtcatttgatccatgtagccgacc 608410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 3206570 - 3206492
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||| | |||||||||||||  |||||||||||||||||| |||||    
T  3206570 gatttagaggtcaatgagttggatccaaatatggtttttaatagaacactatggcgtcatttgatccatgtagccgacc 3206492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 14030966 - 14031034
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccat 314  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||| ||||| | ||||||||||||||    
T  14030966 gatttagaggtcaatgggttagatccaaatatgatttttgatagaatactataacgtcatttgatccat 14031034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 35043552 - 35043480
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||| ||| ||||||||| || ||| |||||||||||||||| ||||||||||| ||||||    
T  35043552 gatttagaggtcaatgtgttggatccaaatatggtttttgatagaacactatgacgtcatttgatcaatgtag 35043480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 30031427 - 30031506
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    |||||||||||||||||||| |||  |||| || |||||||||||||||||||  || ||||||||||||||| ||||||    
T  30031427 gatttagaggtcaatgagttggatttaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgacct 30031506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 9706941 - 9707019
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| |||||||| ||||||||| || ||| |||||||||||||||   ||||||||||||||||| |||||    
T  9706941 gatttagaggttaatgagttggatccaaatatggtttttgatagaacactatggcatcatttgatccatgtagccgacc 9707019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 5258259 - 5258181
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||| ||||||||||| || ||| ||||  |||||||||  ||||||||||||| |||| |||||    
T  5258259 gatttagaggtcaatgagctagatccaaatatggtttttgattaaacactatggcgtcatttgatccacgtagccgacc 5258181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 33497130 - 33497198
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccat 314  Q
    |||||| ||||||||||||| ||||||||| |||||||||||| ||||||||   || |||||||||||    
T  33497130 gatttaaaggtcaatgagttggatccaaatatgatttatgatataacactatagcgtaatttgatccat 33497198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 325
Target Start/End: Complemental strand, 1615298 - 1615255
Alignment:
Q  282 tatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  1615298 tatgatagaacactatgacgtcatttgatccatgtagccgacct 1615255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 10099005 - 10098929
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||  |||| || | |||||||||||||||  | ||||||||||||||||| ||||||    
T  10099005 gatttagaggtcaatgagttggatttaaatatggtgtatgatagaacacta--acgtcatttgatccatgtaatcgacc 10098929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 24665983 - 24666035
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatga 299  Q
    ||||||||||||||||||| |||| |||| || |||||||||||||| |||||    
T  24665983 atttagaggtcaatgagttggatcgaaatatggtttatgatagaacattatga 24666035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 30679567 - 30679639
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||| |||||| |||| |||||||||| | | |||||||||||| ||| | ||||||||||| ||||||    
T  30679567 gatttagaagtcaataagttggatccaaattcggtctatgatagaacattataacgtcatttgatctatgtag 30679639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 318
Target Start/End: Complemental strand, 30789147 - 30789113
Alignment:
Q  284 tgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||| ||||||||||||||||||    
T  30789147 tgatagaacactatgacgtcatttgatccatgtag 30789113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 12119729 - 12119676
Alignment:
Q  271 caaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||| |||||| | |||||||| ||||| |||||||||||||||||| |||||    
T  12119729 caaatatgatttttaatagaacattatgacgtcatttgatccatgtagccgacc 12119676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 3210607 - 3210547
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||| |||  |||| ||| ||||||||||||| |||| ||| |||||||||||||||    
T  3210607 aatgagttggatggaaatatgagttatgatagaacattatggtgtaatttgatccatgtag 3210547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 5096005 - 5096077
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||| ||| |||||||| |||| |||| || |||||||||||||| ||||  || |||||||| ||||||    
T  5096005 gatttagtggttaatgagttggatcaaaatatggtttatgatagaacattatggcgtaatttgatctatgtag 5096077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 6055882 - 6055810
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||| |||||||||||||||||| |  | ||| |||||||| || || || ||||||| |||||||    
T  6055882 gatttagaggttaatgagttagatccaaatatagtgtataatagaacattacgacgtaatttgatgcatgtag 6055810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 22090267 - 22090345
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||| |||||||||||||||||| |||||    
T  22090267 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttgatccatgtagccgacc 22090345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 15086093 - 15086165
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||    
T  15086093 gatttagaggtcaatgagttggatccaaatatgatttttgatagaacactatgacgtcatttgatccatgtag 15086165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 247 - 315
Target Start/End: Complemental strand, 24020377 - 24020309
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatg 315  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  24020377 atttagaggtcaatgagttggatccaaatttgatttatgatagaacactatggcgtcatttgatccatg 24020309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 1210916 - 1210994
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  1210916 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 1210994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 25979342 - 25979264
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||||  |||||||||||||||||| |||||    
T  25979342 gatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgacc 25979264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 30202241 - 30202163
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  30202241 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 30202163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 34792460 - 34792382
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||||  |||||||||||||||||| |||||    
T  34792460 gatttaaaggtcaatgagttggatccaaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgacc 34792382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 49347504 - 49347426
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  49347504 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 49347426  T

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Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 37311866 - 37311788
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||| |||||||||||||||  |||||||||||||||||| |||||    
T  37311866 gatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgacc 37311788  T

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Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 39318300 - 39318378
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||||  || ||||||||||||||| |||||    
T  39318300 gatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgacc 39318378  T

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Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 324
Target Start/End: Original strand, 9592904 - 9592983
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||||||||  ||||||| | ||||||||||||||||   |||||||||||||||||| |||||    
T  9592904 tgatttagaggtcaatgagttagatttaaatttggtgtatgatagaacactatagcgtcatttgatccatgtagccgacc 9592983  T

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Target: chr1; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 27520317 - 27520239
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    |||||||| | |||||| | ||||||||| ||||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  27520317 atttagagattaatgagctggatccaaatatgatttatgatagaacattatgatgtaatttgattcatgtagtcgacct 27520239  T

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Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 52921251 - 52921329
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||| || ||||||||| || ||||||||||||||||||   |||||||||||||||||| |||||    
T  52921251 gatttagaggtcaatgaattggatccaaatatggtttatgatagaacactattgcgtcatttgatccatgtagccgacc 52921329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 4001566 - 4001494
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| ||||||||| || ||| ||||||||| ||||||  |||||||||||||||||    
T  4001566 gatttagaggtcaatgagttggatccaaatatggtttttgatagaaccctatgacatcatttgatccatgtag 4001494  T

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Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 8391943 - 8392015
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||||||| |||| ||||||||| |||||| |||||||| ||||||  ||||||||||||||||||    
T  8391943 gatttagaggtcaataagttggatccaaatatgatttttgatagaatactatggcgtcatttgatccatgtag 8392015  T

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Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 8672089 - 8672157
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccat 314  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||||   ||||||||||||||    
T  8672089 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatagcgtcatttgatccat 8672157  T

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Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 32231065 - 32230997
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccat 314  Q
    |||||||||||||||||||| |||||||| ||| | ||||||||||||||||| ||| |||||||||||    
T  32231065 gatttagaggtcaatgagttggatccaaagttggtctatgatagaacactatggtgtaatttgatccat 32230997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 43240491 - 43240411
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    ||||||| | ||||||||||| |||||||||||| | |||||||||||||||||  |||||||||| ||||||| ||||||    
T  43240491 tgatttatatgtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgattcatgtagccgacct 43240411  T

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Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 51602227 - 51602299
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||  |||  ||||||||||||||||||    
T  51602227 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacatcatggcgtcatttgatccatgtag 51602299  T

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Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 4029293 - 4029371
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||| ||||||||||||| |||||||||||| | ||||||| |||||||||  | |||||||||||||||| |||||    
T  4029293 gatttaaaggtcaatgagttggatccaaatttggtgtatgatataacactatggcgacatttgatccatgtagccgacc 4029371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 4707331 - 4707254
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||||||||||  || ||||||| ||||||| |||||    
T  4707331 gatttagaggttaatgagttggatccaaatttggtttatgatagaacactatggcgtaatttgat-catgtagccgacc 4707254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 38807782 - 38807704
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||| ||||| ||||||||| || |||||||||||||||||||  || ||||| ||||||||| |||||    
T  38807782 gatttagaggtcaacgagttggatccaaatatggtttatgatagaacactatggcgtaatttgttccatgtagccgacc 38807704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 696440 - 696519
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacacta-tgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||| ||||||||||||| ||  ||||||||||| |||||| |||||    
T  696440 gatttagaggtcaatgagtttgatccaaatatggtttttgatagaacactattggcgtcatttgatcaatgtagccgacc 696519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 325
Target Start/End: Complemental strand, 10200417 - 10200338
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    ||||||||| || ||||||| ||||||||| || ||||||||||||||  ||| ||| ||||||||||||||| ||||||    
T  10200417 gatttagagatcgatgagttggatccaaatatggtttatgatagaacatcatggtgtaatttgatccatgtagccgacct 10200338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 32079286 - 32079210
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||  ||  ||||||||||| |||||| |||||    
T  32079286 gatttagaggtcaatgagttggatccaaatctggtttatgatagaacac--tggcgtcatttgatcgatgtagccgacc 32079210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 317
Target Start/End: Complemental strand, 51440876 - 51440805
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgta 317  Q
    |||||| ||||||||||||| |||||||||||| | ||||||||||||||| |  |||||||||| ||||||    
T  51440876 gatttataggtcaatgagttggatccaaatttggtgtatgatagaacactacggcgtcatttgattcatgta 51440805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 4415520 - 4415597
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    |||||||||||||||||||| |||| |||| |||||| | |||||||| ||||   ||||||||||||||||| ||||    
T  4415520 gatttagaggtcaatgagttggatctaaatatgattttttatagaacattatggcatcatttgatccatgtagccgac 4415597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 44751677 - 44751734
Alignment:
Q  268 atccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    ||||||||||| | |||||||||||||||||  |||||||||||||||||| ||||||    
T  44751677 atccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacct 44751734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 268 - 324
Target Start/End: Complemental strand, 44941865 - 44941809
Alignment:
Q  268 atccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| |||||||||||||||||||  || ||||||||||||||| |||||    
T  44941865 atccaaatttggtttatgatagaacactatggcgtaatttgatccatgtagccgacc 44941809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 48865818 - 48865746
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||| ||||| ||||||||| || || |||||||||||| | |||| ||| |||||||||||||||    
T  48865818 gatttagaggttaatgaattagatccagatatggtttatgatagaatattatggtgtaatttgatccatgtag 48865746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 6165081 - 6165022
Alignment:
Q  2 tcttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagtt 61  Q
    ||||||||| ||||| |||||||||||||||||  ||| |||| ||||||||||||||||    
T  6165081 tcttcaattctgattctgatttgatgattacatatgttttttacttgattgccatgagtt 6165022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 324
Target Start/End: Original strand, 28533673 - 28533716
Alignment:
Q  281 ttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  28533673 ttatgatagaacactatgacgtcatttgatccatgtagccgacc 28533716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 32082868 - 32082789
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacacta-tgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||| ||||| || ||| |||||||||||||  |  |||||||||||||||||| |||||    
T  32082868 gatttagaggtcaatgagttggattcaaatatggtttttgatagaacactacggcagtcatttgatccatgtagccgacc 32082789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 5113940 - 5113993
Alignment:
Q  272 aaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    ||||||| | |||||||||||||||||| |||||||||| ||||||| ||||||    
T  5113940 aaatttggtgtatgatagaacactatgacgtcatttgattcatgtagccgacct 5113993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 16142091 - 16142018
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagt 319  Q
    ||||||||| | ||| |||||||||||| | || |||||||| ||||| ||||| || ||||||||||||||||    
T  16142091 gatttagagtttaataagttagatccaattatggtttatgatcgaacaatatgacgtaatttgatccatgtagt 16142018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 19936631 - 19936708
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    |||||||| || |||||||||||||||||| || || ||||||||||| || |  || ||||||||||||||| ||||    
T  19936631 gatttagatgttaatgagttagatccaaatatggttaatgatagaacattacggcgtaatttgatccatgtagccgac 19936708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 324
Target Start/End: Original strand, 41560401 - 41560478
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| | |||||||| ||||||||| ||  ||||||||||||| ||||  || ||||||||||||||| |||||    
T  41560401 atttagagattaatgagttggatccaaatatgggttatgatagaacattatggcgtaatttgatccatgtagccgacc 41560478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 16764569 - 16764513
Alignment:
Q  2 tcttcaattatgattttgatttgatgattacatgagttctttagttgattgccatga 58  Q
    ||||||||| ||||| |||||||||||||||||  ||| ||||||||||||| ||||    
T  16764569 tcttcaattctgattctgatttgatgattacatatgttttttagttgattgcaatga 16764513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 46423324 - 46423249
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||| |||| ||||   |||  |||||||||||||||||| |||||    
T  46423324 gatttagaggtcaatgagttggatccaaatatggtttttgattgaac---atggcgtcatttgatccatgtagccgacc 46423249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 324
Target Start/End: Complemental strand, 37462987 - 37462909
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||| |||||||| |||| |||| || ||||| |||||||| ||||  || ||||||||||||||| |||||    
T  37462987 tgatttagaggttaatgagtttgatc-aaatatggtttatcatagaacattatggcgtaatttgatccatgtagccgacc 37462909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 10801600 - 10801546
Alignment:
Q  2 tcttcaattatgattttgatttgatgattacatgagttctttagttgattgccat 56  Q
    ||||||||| ||||| |||||||||||||||||  ||| ||||||||||| ||||    
T  10801600 tcttcaattctgattctgatttgatgattacatatgttttttagttgatttccat 10801546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 12930408 - 12930350
Alignment:
Q  260 tgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||| ||||||||| ||||||||||||||| | ||||| || ||||||||| |||||    
T  12930408 tgagttggatccaaatatgatttatgatagaagattatgacgtaatttgatccgtgtag 12930350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 324
Target Start/End: Original strand, 29577459 - 29577501
Alignment:
Q  282 tatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||  |||||||||||||||||| |||||    
T  29577459 tatgatagaacactatggcgtcatttgatccatgtagccgacc 29577501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 318
Target Start/End: Original strand, 42337749 - 42337799
Alignment:
Q  268 atccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||| | |||||||||||||||||   |||||||||||||||||    
T  42337749 atccaaatttggtgtatgatagaacactatggcatcatttgatccatgtag 42337799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 28090784 - 28090727
Alignment:
Q  267 gatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||| || |||||||||||||| ||||  || ||||||||||||||| |||||    
T  28090784 gatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgacc 28090727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 44905468 - 44905415
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatg 298  Q
    ||||||| |||| |||||||| ||||||||| || ||||| |||||||||||||    
T  44905468 tgatttataggttaatgagtttgatccaaatatggtttatcatagaacactatg 44905415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 5338896 - 5338956
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||| |||| |||| |||||||| |||||||| ||||  || |||||||||||||||    
T  5338896 aatgagttggatcgaaatgtgatttattatagaacattatggcgtaatttgatccatgtag 5338956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 39123445 - 39123401
Alignment:
Q  280 tttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||| |||| ||| ||||||||||||||| |||||    
T  39123445 tttatgatagaacattatggtgtaatttgatccatgtagccgacc 39123401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 31639 - 31717
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||| ||| |||||||||||||||||| |||||    
T  31639 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactgtgaagtcatttgatccatgtagccgacc 31717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 11594131 - 11594209
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  11594131 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 11594209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 12841386 - 12841308
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||||||||||  |||||||||||||||||| |||||    
T  12841386 gatttagaggtcaatgagttgtatccaaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgacc 12841308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 34869591 - 34869669
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  34869591 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 34869669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 37618116 - 37618194
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||| |||| |||||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||    
T  37618116 gatttagaggtcaataagttggatccaaatttggtgtatgatagaacactatggtgtcatttgatccatgtagccgacc 37618194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 45836593 - 45836515
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||||  |||||||||||||||||| |||||    
T  45836593 gatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgacc 45836515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 36869355 - 36869286
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatg 315  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  36869355 gatttagatgtcaatgagttagattcaaatttgatttatgatagaacactatggcgtcatttgatccatg 36869286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 247 - 324
Target Start/End: Original strand, 43491480 - 43491557
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||    
T  43491480 atttagaggtcaataagttggatccaaatatgatttatgatagaacactatgatgtaatttcatccatgtagccgacc 43491557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 49029447 - 49029519
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  ||||||||||||||||||    
T  49029447 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtag 49029519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 245 - 324
Target Start/End: Original strand, 48919282 - 48919361
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||||||| ||||||||| || ||||||||| | |||||||  ||||||||||||||||||||||||    
T  48919282 tgatttagaggtcaatgagtttgatccaaatatggtttatgataaaccactatggcgtcatttgatccatgtagtcgacc 48919361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 27648951 - 27649029
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| ||  || ||||||||||||||| |||||    
T  27648951 gatttagaggtcaatgagttggatccaaatttggtttatgatagaacactgtggcgtaatttgatccatgtagccgacc 27649029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 31682713 - 31682635
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||| || |||||| ||||| |||||||||||||||||||  |||||||||||||||||| |||||    
T  31682713 gatttagaggtcaatgaattggatccatatttggtttatgatagaacactatggcgtcatttgatccatgtagccgacc 31682635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 35906312 - 35906234
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||| |||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  35906312 gatttcgaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 35906234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 38900128 - 38900206
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||| ||||||||||  |||||||||||||||||| |||||    
T  38900128 gatttagaggtcaatgagttggatccaaatttggtgtatgattgaacactatggcgtcatttgatccatgtagccgacc 38900206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 39906483 - 39906405
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||| || |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  39906483 gatttagaggtcaatgacttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 39906405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 40980039 - 40979961
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||||  || ||||||||||||||| |||||    
T  40980039 gatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgacc 40979961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 43281845 - 43281923
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||| |||||||||||||||  |||||||||||||||||| |||||    
T  43281845 gatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgacc 43281923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 21078088 - 21078165
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||| ||||  |||||||||||||||||| ||||    
T  21078088 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacattatggcgtcatttgatccatgtagccgac 21078165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 324
Target Start/End: Complemental strand, 2885834 - 2885755
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| |||||||||||| || |||||| || ||||||||||||||||||| ||| ||||||||||||||| |||||    
T  2885834 tgatttagtggtcaatgagttggacccaaatatggtttatgatagaacactatggtgtaatttgatccatgtagccgacc 2885755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 22349791 - 22349869
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||| |||||||| |||| |||||||||||| | |||||||||| ||||||  ||||||||||||||||||||||||    
T  22349791 gatttaaaggtcaataagttggatccaaatttggtatatgatagaatactatggcgtcatttgatccatgtagtcgacc 22349869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 29650555 - 29650633
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||| ||||||||||||| |  |||||||||||||||||| |||||    
T  29650555 gatttagaggtcaatgagtttgatccaaatatggtttttgatagaacactaaggcgtcatttgatccatgtagccgacc 29650633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 36652163 - 36652241
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||| |||||||||||||||  ||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  36652163 gattcagaggtcaatgagttgaatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 36652241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 247 - 324
Target Start/End: Original strand, 6375040 - 6375117
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||| |||||| |||||||||||  | |||||||||||||||||  |||||||||||||||||| |||||    
T  6375040 atttagaggtcagtgagttggatccaaatttagtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 6375117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 34035264 - 34035187
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| |||||||||| ||||||||| || || ||||||||||||||||  |||||||||||||||||| |||||    
T  34035264 atttagagatcaatgagttggatccaaatatggttcatgatagaacactatggcgtcatttgatccatgtagccgacc 34035187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 38607163 - 38607240
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    |||||||||||||||||||| ||||||||| || ||| |||||||||||||||  ||| |||||||||||||| ||||    
T  38607163 gatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcgtttgatccatgtagccgac 38607240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 15682345 - 15682417
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||||||  ||  ||||||||||||||    
T  15682345 gatttagaggtcaataagttggatccaaatatgatttatgatagaacactatggcgtactttgatccatgtag 15682417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 33349918 - 33349838
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    ||||||||||||||||||||| |||||||||||| | |||  |||||||||||   |||||||||||||||||| ||||||    
T  33349918 tgatttagaggtcaatgagttggatccaaatttggtgtatagtagaacactatagcgtcatttgatccatgtagccgacct 33349838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 32631735 - 32631813
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||| ||||||||| |||||  ||||||||||| |||||| |||||    
T  32631735 gatttagaggtcaatgagttggatccaaatatggtttttgatagaacgctatggcgtcatttgatctatgtagccgacc 32631813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 46355967 - 46355889
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||| ||||||||||||| ||||||||| || | |||||||||||||||||   ||||||||||||||||| |||||    
T  46355967 gatttaaaggtcaatgagttggatccaaatctggtgtatgatagaacactatgccatcatttgatccatgtagccgacc 46355889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 13859119 - 13859067
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatg 298  Q
    |||||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  13859119 gatttagaggccaatgagttggatccaaatttggtttatgatagaacactatg 13859067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 31859045 - 31859117
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgta 317  Q
    ||||||||| ||||||||||| ||||||||||| |||||| ||||||||||||||  | ||||||| ||||||    
T  31859045 tgatttagaagtcaatgagttggatccaaatttaatttataatagaacactatgacataatttgattcatgta 31859117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 45601659 - 45601719
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||| |||| |||| |||||||||||||||||||||| ||| |||||||||||||||    
T  45601659 aatgagttggatcaaaatatgatttatgatagaacactatggtgtaatttgatccatgtag 45601719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 33073105 - 33073172
Alignment:
Q  251 agaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||||||| |||||||||||| | ||| ||| |||| ||||| ||||||||||||||||||    
T  33073105 agaggtcaatgagttggatccaaatttggtgtataataaaacaatatgacgtcatttgatccatgtag 33073172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 44855283 - 44855207
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| ||||||||  |||||||||  || ||||| ||||||||| |||||    
T  44855283 gatttagaggtcaatgagttggatccaaatttggtttatgat--aacactatggcgtaatttggtccatgtagccgacc 44855207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 28208423 - 28208361
Alignment:
Q  262 agttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||| ||||||||| || |||||||||||||||||||  |||||||||||||||||| |||||    
T  28208423 agttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgacc 28208361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 31681123 - 31681053
Alignment:
Q  254 ggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||| ||||||||| ||  ||||||||||| ||||||| || ||||||||||||||| |||||    
T  31681123 ggtcaatgagttggatccaaatatggcttatgatagaatactatgacgtaatttgatccatgtagccgacc 31681053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 7273276 - 7273349
Alignment:
Q  251 agaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||| ||| ||||| || ||||||||| | |||||||| || ||||||||||||||| |||||    
T  7273276 agaggtcaatgagttggattcaaatatggtttatgatatagcactatgacgtaatttgatccatgtagccgacc 7273349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 35559104 - 35559032
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||  |||||| ||||||| |||    |||||||||||||||||    
T  35559104 gatttagaggtcaatgagttggatccaaatttagtttatggtagaacattatagcatcatttgatccatgtag 35559032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 44951335 - 44951403
Alignment:
Q  255 gtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    |||||| | |||||| ||||| | ||||||||||||||||||||| || ||||||||||||||| ||||    
T  44951335 gtcaattacttagattcaaatattatttatgatagaacactatgacgtaatttgatccatgtagccgac 44951403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 9210814 - 9210743
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||| |||||||| ||||||||| || ||||||||| |||| ||||  || |||||||||||||||    
T  9210814 atttagaggttaatgagttggatccaaatatggtttatgatacaacattatggcgtaatttgatccatgtag 9210743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 36101876 - 36101810
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| |||| |||| || |||||||||||||| ||||| || |||||||||||||||| ||||    
T  36101876 aatgagttggatcaaaatatggtttatgatagaacattatgacgtaatttgatccatgtagttgacc 36101810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 24598298 - 24598221
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    ||||||||||||||||||||  |||||||| |||||| |||||||| | | ||   ||||||||||||||||| ||||    
T  24598298 gatttagaggtcaatgagttgaatccaaatatgatttttgatagaatattttggcatcatttgatccatgtagccgac 24598221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 28628044 - 28627967
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    ||||||||| | |||||||| ||| ||||| || |||||||||||||| ||||  || ||||||||||||||| ||||    
T  28628044 gatttagagattaatgagttggatgcaaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccgac 28627967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 324
Target Start/End: Original strand, 42969870 - 42969947
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||| |||||||| ||||||||| || |||||||| ||||| |||  | | ||||||||||||||| |||||    
T  42969870 atttagaggttaatgagttggatccaaatatggtttatgattgaacattatcgtataatttgatccatgtagccgacc 42969947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 14057649 - 14057721
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||| |||| ||| ||| ||||| || |||||||||||||| ||||  || |||||||||||||||    
T  14057649 gatttagaggttaatgcgttcgattcaaatatggtttatgatagaacattatggggtaatttgatccatgtag 14057721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 14367677 - 14367749
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||| |||| ||| ||| ||||| || |||||||||||||| ||||  || |||||||||||||||    
T  14367677 gatttagaggttaatgcgttcgattcaaatatggtttatgatagaacattatggggtaatttgatccatgtag 14367749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 35922424 - 35922492
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccat 314  Q
    ||||||||||| ||||||||  ||| |||| ||||||||||||||||| |||||  | |||||||||||    
T  35922424 gatttagaggttaatgagttgaatctaaatatgatttatgatagaacattatgacctaatttgatccat 35922492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 36239906 - 36239835
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||| | || ||||| ||||||||| || |||||||||||||| ||||  || |||||||||||||||    
T  36239906 atttagagattaacgagttggatccaaatatgctttatgatagaacattatggcgtaatttgatccatgtag 36239835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 40415178 - 40415256
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| |||||||| ||||||||| || |||||||| |||| ||||    | ||||||||||||||| |||||    
T  40415178 gatttagaggttaatgagtttgatccaaatatgttttatgattgaaccctatagcttaatttgatccatgtagccgacc 40415256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 319
Target Start/End: Original strand, 39812145 - 39812182
Alignment:
Q  282 tatgatagaacactatgatgtcatttgatccatgtagt 319  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  39812145 tatgatagaacattatgatgtcgtttgatccatgtagt 39812182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 21517490 - 21517426
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatc 311  Q
    |||||||| | ||| |||| ||||||||| |||||||||||| |||| ||||| || ||||||||    
T  21517490 atttagagattaataagttggatccaaatatgatttatgatataacattatgacgtaatttgatc 21517426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 318
Target Start/End: Original strand, 24777168 - 24777204
Alignment:
Q  282 tatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||| |||||||||| |||||||    
T  24777168 tatgatagaacactatgacgtcatttgattcatgtag 24777204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 37976406 - 37976458
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatg 298  Q
    ||||||||| | |||||||| ||||||||| || |||||||||||||| ||||    
T  37976406 gatttagagattaatgagttggatccaaatatggtttatgatagaacattatg 37976458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 10639473 - 10639551
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  10639473 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 10639551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 29816553 - 29816631
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  29816553 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 29816631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 34273184 - 34273256
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||| |||||| |||||||||||    
T  34273184 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgtcattcgatccatgtag 34273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 2915606 - 2915529
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||||||  |||||||||||||||||| |||||    
T  2915606 gatttagaggtcaatgagttggatccaaatttggtt-atgatagaacactatggcgtcatttgatccatgtagccgacc 2915529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 4496555 - 4496633
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||   ||||||||||||||||| |||||    
T  4496555 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcatcatttgatccatgtagccgacc 4496633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 12492495 - 12492417
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||| ||||||| |||||    
T  12492495 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatgcatgtagccgacc 12492417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 28976970 - 28976892
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||| ||||||| |||||    
T  28976970 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgattcatgtagccgacc 28976892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 38685138 - 38685216
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||| ||||  |||||||||||||||||| |||||    
T  38685138 gatttagaggtcaatgagttggatccaaatatggtttatgatagaacaatatggcgtcatttgatccatgtagccgacc 38685216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 1287690 - 1287612
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||| ||||||||  |||| ||||||||||||| |||||    
T  1287690 gatttagaggtcaatgagttggatccaaatttggtgtatgatagtacactatggcgtcagttgatccatgtagccgacc 1287612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 3302015 - 3302093
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||| ||||||||||||| |  |||||||||||||||||| |||||    
T  3302015 gatttagaggtcaatgagttggatccaaatatggtttttgatagaacactacggcgtcatttgatccatgtagccgacc 3302093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 13561497 - 13561419
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||| | || ||| |||||||||||||||  |||||||||||||||||| |||||    
T  13561497 gatttagaggtcaatgagttggatccaactatggtttttgatagaacactatggcgtcatttgatccatgtagccgacc 13561419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 14911343 - 14911421
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| |||||||| ||||||||| |||||| |||||||| ||||||  |||||||||||||||||| |||||    
T  14911343 gatttagaggttaatgagttggatccaaatatgatttttgatagaatactatggcgtcatttgatccatgtagccgacc 14911421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 16913994 - 16913916
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || |||| |||||||||| |||  |||||||||||||||||| |||||    
T  16913994 gatttagaggtcaatgagttggatccaaatatggtttacgatagaacaccatggcgtcatttgatccatgtagccgacc 16913916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 30213755 - 30213824
Alignment:
Q  255 gtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  30213755 gtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 30213824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 2075584 - 2075512
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | |||||||||| ||||||  |||||||||| |||||||    
T  2075584 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaatactatggcgtcatttgattcatgtag 2075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 3174242 - 3174302
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttt 65  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||| |||||||||||||    
T  3174242 cttcaattatgattatgatttgatgattacat--gttctttagttgatttccatgagttcttt 3174302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 20456944 - 20457022
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||| ||||  ||| ||||||||| |||||||||||| ||||  |||||||||||||||||| |||||    
T  20456944 gatttagaggtcaataagttgaatctaaatttgatgtatgatagaacattatggcgtcatttgatccatgtagccgacc 20457022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 5558314 - 5558390
Alignment:
Q  248 tttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||  ||||||||| || |||||||||||||||||||   | ||||||||||||||| |||||    
T  5558314 tttagaggtcaatgagtaggatccaaatatggtttatgatagaacactatggcataatttgatccatgtagccgacc 5558390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 418145 - 418067
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||| | |||||||| ||||||||| || |||||||||||||| ||||  || ||||||||||||||| |||||    
T  418145 gatttagagattaatgagttggatccaaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccgacc 418067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 1275435 - 1275513
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| ||| ||||  ||||||||||| | | |||||||||| ||||| |||||||||||||||||| |||||    
T  1275435 gatttagaggttaatcagttgaatccaaatttggtgtttgatagaacattatgacgtcatttgatccatgtagccgacc 1275513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 24178681 - 24178759
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||| |||||||||| |||||||||||  | |||||||||||||||||   |||||||||| |||||| |||||    
T  24178681 gatttagagttcaatgagttggatccaaatttagtgtatgatagaacactatggcatcatttgatctatgtagccgacc 24178759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 42504358 - 42504293
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatc 311  Q
    |||||||| |||||||||||| |||||||| || |||||||||||||| ||||| || ||||||||    
T  42504358 gatttagatgtcaatgagttatatccaaatatggtttatgatagaacattatgacgtaatttgatc 42504293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 16347489 - 16347413
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||| || ||| ||||| || |||||||||||||||  ||  |||||||||||||||||| |||||    
T  16347489 gatttagaggtcaatgatttggatacaaatatggtttatgatagaacac--tggcgtcatttgatccatgtagccgacc 16347413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 28276410 - 28276481
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||| |||| ||| ||||| |  |||||||||||| |||||| ||| |||||||||||||||    
T  28276410 atttagaggtcaataagttggattcaaatattgtttatgatagaaaactatggtgtaatttgatccatgtag 28276481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 36215659 - 36215730
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgta 317  Q
    ||||||||||||||| | ||  |||||||  ||| |||||||||||||||||||||| ||||||| ||||||    
T  36215659 gatttagaggtcaattaattgaatccaaacatgacttatgatagaacactatgatgtgatttgattcatgta 36215730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 38501528 - 38501457
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||| |||||  ||| || ||||| ||||||    
T  38501528 atttagaggtcaataagttggatccaaatatgatttatgatagaaaactatagtgtaatatgatcgatgtag 38501457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 2552953 - 2553002
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacact 295  Q
    |||||||| ||||||||||| |||||||||||| | ||||||||||||||    
T  2552953 gatttagatgtcaatgagttggatccaaatttggtgtatgatagaacact 2553002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 28053 - 28105
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatg 298  Q
    ||||||||||| ||| |||| ||||||||| |||||| |||||||||||||||    
T  28053 gatttagaggttaataagttggatccaaatatgatttctgatagaacactatg 28105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 2393048 - 2393120
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||||||||| ||||| |||||| |  ||| | |||||| |||||| | |||||||||||||||||    
T  2393048 gatttagaggtcaatgaattagacccaaatatagtttctaatagaatactatggtatcatttgatccatgtag 2393120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 31220554 - 31220629
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcga 322  Q
    ||||| ||| |||||||||| |||| |||| |||||| |||||||  | |||||||||||||||||||| |||||||    
T  31220554 gattttgagatcaatgagttggatctaaatatgatttttgatagat-attatgatgtcatttgatccatatagtcga 31220629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 14667954 - 14668013
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgta 317  Q
    |||||||| ||||||| | || |||||||||||||| |||| ||| ||||||||||||||    
T  14667954 aatgagttggatccaagtatggtttatgatagaacattatggtgtaatttgatccatgta 14668013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 26884801 - 26884722
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatt-tgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| |||| ||  |||||||| | |||||||||||||||||||| || |  ||||||||||||||| |||||    
T  26884801 gatttagaggttaatgggtcggatccaaaatatgatttatgatagaacactacgacgcaatttgatccatgtagccgacc 26884722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 318
Target Start/End: Original strand, 38657040 - 38657086
Alignment:
Q  272 aaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||| ||||||||||||||||| ||||||||| |||||| |||||||    
T  38657040 aaatatgatttatgatagaacattatgatgtcgtttgattcatgtag 38657086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 39040927 - 39041005
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||| ||||  ||| |||| || ||| ||||| ||||| ||  ||||||||||||||||||| |||||    
T  39040927 gatttagaggtcaataagttgcatctaaatatggtttttgatataacaccatagtgtcatttgatccatgtagccgacc 39041005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 14665886 - 14665931
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaac 292  Q
    ||||||| ||||||||||| ||||||||| || |||||||||||||    
T  14665886 atttagaagtcaatgagttggatccaaatatggtttatgatagaac 14665931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 18739444 - 18739398
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgatt 51  Q
    |||||||||||||| |||||||||||||||||  ||| |||||||||||    
T  18739444 cttcaattatgattctgatttgatgattacat--gttatttagttgatt 18739398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 41808105 - 41808169
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcga 322  Q
    |||||||| |||  |||| |||| |||||||||||| |||||  || ||||||||||||||||||    
T  41808105 aatgagttggatataaatatgatgtatgatagaacattatgacatcgtttgatccatgtagtcga 41808169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 12096816 - 12096738
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  12096816 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 12096738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 52138971 - 52139049
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||| || ||||||||||||||| |||||    
T  52138971 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgttatttgatccatgtagccgacc 52139049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 28245607 - 28245680
Alignment:
Q  245 tgatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||||||||||||| |||||||||||| | ||| |||||||||||||| ||||||||||||||||||    
T  28245607 tgatttagaggtcaatgagttggatccaaatttggtgtataatagaacactatgacgtcatttgatccatgtag 28245680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 52156195 - 52156117
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||||  ||||| |||||||||||| |||||    
T  52156195 gatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtcatctgatccatgtagccgacc 52156117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 53519751 - 53519829
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||||||||  | ||| |||||||||||||||| |||||||||||||||||| |||||    
T  53519751 gatttagaggtcaatgagttggatccaaataaggtttttgatagaacactatgacgtcatttgatccatgtagccgacc 53519829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 51447828 - 51447756
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||||| |||||||    
T  51447828 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgattcatgtag 51447756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 54279191 - 54279263
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  ||||||||||| ||||||    
T  54279191 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatcaatgtag 54279263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 35033317 - 35033396
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    |||||||||||||||||||| ||||||||| || ||| |||||||||||||||  || ||||||||||||||| ||||||    
T  35033317 gatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgttatttgatccatgtagccgacct 35033396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 22243 - 22321
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||| |||||||||||||||  ||||||||||| |||||| |||||    
T  22243 gatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatctatgtagccgacc 22321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 5169003 - 5169081
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||| ||||||||||||| ||||||||| || ||| |||||||||||||||  |||||||||||||||||| |||||    
T  5169003 gatttataggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgacc 5169081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 48508406 - 48508484
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||| ||||| || |||||||||||||||||||  || ||||||||||||||| |||||    
T  48508406 gatttagaggtcaatgagttggattcaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgacc 48508484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 48953523 - 48953453
Alignment:
Q  253 aggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| || |||| |||||||||| ||||    
T  48953523 aggtcaatgagttggatccaaatatgatttatgatagaacactatgacgtaatttaatccatgtagccgac 48953453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 53262312 - 53262390
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| ||||||||| || ||| |||||||||||||||  ||||||||||| |||||| |||||    
T  53262312 gatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatctatgtagccgacc 53262390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 47555436 - 47555371
Alignment:
Q  253 aggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||||| |||||||||||| | |||||||||||||||||  ||||||||||||||||||    
T  47555436 aggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtag 47555371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 25191548 - 25191620
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||||||||| ||||||| |||| || ||| |||||||||||||||  ||||||||||||||||||    
T  25191548 gatttagaggtcaatgaattagatcaaaatatggtttttgatagaacactatggcgtcatttgatccatgtag 25191620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 324
Target Start/End: Complemental strand, 47233704 - 47233629
Alignment:
Q  249 ttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||| |||||||||||| || ||| |||||||||||||||  |||||||||| ||||||| |||||    
T  47233704 ttagaggtcaatgaattagatccaaatatggtttttgatagaacactatggcgtcatttgattcatgtagccgacc 47233629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 38060887 - 38060963
Alignment:
Q  248 tttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||| ||||||||||| ||||||||| || ||||||||||||||| |||  || ||||||||||||||| |||||    
T  38060887 tttagaagtcaatgagttggatccaaatatggtttatgatagaacaccatggcgtaatttgatccatgtagccgacc 38060963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 49042107 - 49042186
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgattt-atgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| |||||||| ||||||||| || ||| ||||||||||||||||  || ||||||||||||||| |||||    
T  49042107 gatttagaggttaatgagttggatccaaatatggttttatgatagaacactatggcgtaatttgatccatgtagccgacc 49042186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 311420 - 311342
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||| |||| |||||| || || ||| |||||||||||||||  |||||||||| ||||||| |||||    
T  311420 gatttagaggtcaattagttggatccagatatggtttttgatagaacactatggcgtcatttgatacatgtagccgacc 311342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 2133719 - 2133645
Alignment:
Q  250 tagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||  |||||||| |  |||||||||||||||||||  || |||||||||||||| ||||||    
T  2133719 tagaggtcaatgagttgaatccaaatatagtttatgatagaacactatggcgtgatttgatccatgtactcgacc 2133645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 38850296 - 38850370
Alignment:
Q  250 tagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||| |||||||| ||  || |||||||| |||||||||||||||||||| || ||||||||||||||| |||||    
T  38850296 tagaagtcaatgaattgaattcaaatttggtttatgatagaacactatgacgtaatttgatccatgtagccgacc 38850370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 54128550 - 54128628
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| || |||||| || |||||||||||||| ||||   | ||||||||||||||| |||||    
T  54128550 gatttagaggtcaatgagttggacccaaatatggtttatgatagaacattatggcataatttgatccatgtaggcgacc 54128628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 268 - 324
Target Start/End: Complemental strand, 7895969 - 7895913
Alignment:
Q  268 atccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  7895969 atccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 7895913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 17022780 - 17022704
Alignment:
Q  249 ttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    ||||||||||||||||| ||||||| |||  |||||||||||| | |||| |||||||| || ||||||| ||||||    
T  17022780 ttagaggtcaatgagttggatccaattttagtttatgatagaatattatggtgtcatttaattcatgtagccgacct 17022704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 29601063 - 29601135
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||| | |||||||| ||| ||||| |  |||||||||||||| |||||||| |||||||||||||||    
T  29601063 gatttagagattaatgagttggattcaaatatagtttatgatagaacattatgatgtaatttgatccatgtag 29601135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 39600792 - 39600724
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccat 314  Q
    ||||||||||| |||||||| ||||||||| || |||| ||||||||| |||| ||| |||||||||||    
T  39600792 gatttagaggttaatgagttggatccaaatctggtttacgatagaacattatggtgtaatttgatccat 39600724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 41842630 - 41842555
Alignment:
Q  250 tagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    ||||||| ||||||||||||  |||| || ||| |||||||||| |||| ||| ||||||||||||||||| ||||    
T  41842630 tagaggttaatgagttagattgaaatatggtttttgatagaacattatggtgtaatttgatccatgtagtcaacct 41842555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 15296078 - 15296148
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgt 316  Q
    ||||||||||| ||||| || ||||||||| ||||||  ||||||||| |||| ||| |||||||||||||    
T  15296078 gatttagaggttaatgaattggatccaaatatgatttcggatagaacattatggtgtaatttgatccatgt 15296148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 318
Target Start/End: Complemental strand, 33271999 - 33271949
Alignment:
Q  268 atccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    ||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  33271999 atccaaatttggtgtatgatagaacactatgacgtcatttgatctatgtag 33271949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 43694882 - 43694804
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||  || |||| ||| | | |||||||||||||| || || ||||||||||| ||||||||||||    
T  43694882 gatttagaggtcaatggattggatctaaactaggtttatgatagaacaatacgacgtcatttgatctatgtagtcgacc 43694804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 52893509 - 52893556
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattg 52  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  52893509 cttcaattatgattatgatttgatgattacat--gttctttagttgattg 52893556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 54365074 - 54365008
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||| |||||| | |||| || |||||||||||||||||||| || ||||||||||||||| |||||    
T  54365074 aatgtgttagaccaaaatatggtttatgatagaacactatgacgtaatttgatccatgtagccgacc 54365008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 54422954 - 54422901
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatga 299  Q
    |||||||||||||||||||| ||||||||| || ||||| |||||| |||||||    
T  54422954 gatttagaggtcaatgagttggatccaaatatggtttattatagaaaactatga 54422901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 23534650 - 23534602
Alignment:
Q  277 tgatttatgatagaacactatgatgtcatttgatccatgtagtcgacct 325  Q
    ||||||||||||||||| ||||  || ||||||||||||||||||||||    
T  23534650 tgatttatgatagaacattatggcgtaatttgatccatgtagtcgacct 23534602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 31566234 - 31566194
Alignment:
Q  284 tgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  31566234 tgatagaacactatggtgtcatttgatccatgtagccgacc 31566194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 39208791 - 39208851
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||  ||||||||| || |||||||||||||| ||||| || |||||||||||||||    
T  39208791 aatgagtaggatccaaatatggtttatgatagaacattatgacgtaatttgatccatgtag 39208851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 19676191 - 19676120
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||| |||||||| ||||||||| || | ||||||||| || ||||  || |||||||||||||||    
T  19676191 atttagaggttaatgagttggatccaaatatgctgtatgatagagcattatggcgtgatttgatccatgtag 19676120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 21239513 - 21239560
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattg 52  Q
    |||||||| ||||| |||||||||||||||||  ||||||||||||||||    
T  21239513 cttcaattctgattatgatttgatgattacat--gttctttagttgattg 21239560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 40106719 - 40106653
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| ||||||||| || |||||||||||||| |||||  | |||||||| ||||||| ||||    
T  40106719 aatgagttggatccaaatatggtttatgatagaacattatgacataatttgatcaatgtagtggacc 40106653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 38431021 - 38431066
Alignment:
Q  248 tttagaggtcaatgagttagatccaaatttgatttatgatagaaca 293  Q
    ||||||||| |||||||| ||||||||| || ||||||||||||||    
T  38431021 tttagaggttaatgagttggatccaaatatggtttatgatagaaca 38431066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 54425076 - 54425023
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatga 299  Q
    |||||||||||||||| ||| ||||||||| || ||||| |||||| |||||||    
T  54425076 gatttagaggtcaatgggttggatccaaatatggtttattatagaaaactatga 54425023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 2338855 - 2338797
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttt 65  Q
    |||||||||||||| |||||||   ||||||||  ||||||| ||||||||||||||||||||    
T  2338855 cttcaattatgattatgatttgt--attacatg--ttctttatttgattgccatgagttcttt 2338797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 4472473 - 4472421
Alignment:
Q  271 caaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    ||||| |||||||| ||||||||||||| ||| | ||||||||||||| ||||    
T  4472473 caaatatgatttataatagaacactatggtgtaacttgatccatgtagccgac 4472421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 30294232 - 30294180
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatg 298  Q
    |||||| ||||||||||||| |||| || | |||||||||||| |||||||||    
T  30294232 gatttataggtcaatgagttggatctaagtatgatttatgataaaacactatg 30294180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 40273278 - 40273238
Alignment:
Q  284 tgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||  |||||||||||||||||| |||||    
T  40273278 tgatagaacactatggcgtcatttgatccatgtagccgacc 40273238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 40991614 - 40991674
Alignment:
Q  258 aatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||| || | |||| || |||||||||||||| |||| ||| |||||||||||||||    
T  40991614 aatgagttggaccaaaatatggtttatgatagaacattatggtgtaatttgatccatgtag 40991674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 313
Target Start/End: Original strand, 48532151 - 48532195
Alignment:
Q  269 tccaaatttgatttatgatagaacactatgatgtcatttgatcca 313  Q
    |||||||||  |||||||||||||||||||  |||||||||||||    
T  48532151 tccaaattttgtttatgatagaacactatggcgtcatttgatcca 48532195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 1059 - 987
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||  ||||||||||||||||||    
T  1059 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtag 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 25643 - 25571
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||| ||||||| ||||||||||    
T  25643 gatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttaatccatgtag 25571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 4392 - 4314
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||||||||||| |||| ||||||| ||||| |||||||||||||| || ||||||||||||||| |||||    
T  4392 gatttagaggtcaatgagttggatctaaatttggtttataatagaacactatgacgttatttgatccatgtaggcgacc 4314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 502 - 580
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||||||||||||||||  | ||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  502 gatttagaggtcaatgagttgtacccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 16749 - 16826
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgac 323  Q
    |||||||||||||||||||| ||||||||| || ||| |||||||||||||||  ||||||||||| |||||| ||||    
T  16749 gatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatctatgtagccgac 16826  T

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Target: scaffold0393 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 11210 - 11150
Alignment:
Q  3 cttcaattatgattttgatttgatgattacatgagttctttagttgattgccatgagttcttt 65  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||| |||||||||||||    
T  11210 cttcaattatgattatgatttgatgattacat--gttctttagttgatttccatgagttcttt 11150  T

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Target: scaffold0692 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 4807 - 4885
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||| |||||||||||| |||||||| || |||||||||||||||||||  || ||||||||| ||||| |||||    
T  4807 gatttagacgtcaatgagttaaatccaaatatggtttatgatagaacactatggcgtaatttgatccgtgtagccgacc 4885  T

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Target: scaffold0045 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 86720 - 86645
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcg 321  Q
    |||||||||||| |   ||| ||||||||| |||| |||||||||||||||||| || ||||||||||||||||||    
T  86720 gatttagaggtcgacaggttggatccaaatatgatgtatgatagaacactatgacgtaatttgatccatgtagtcg 86645  T

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Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 28979 - 28922
Alignment:
Q  267 gatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    |||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  28979 gatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacc 28922  T

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Target: scaffold0199 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 14754 - 14826
Alignment:
Q  246 gatttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtag 318  Q
    |||||| ||||||||||||| ||| ||||| || |||||||| ||||||||||  || |||||||||||||||    
T  14754 gatttaaaggtcaatgagttggattcaaatatggtttatgattgaacactatggcgtaatttgatccatgtag 14826  T

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Target: scaffold0285 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 8415 - 8359
Alignment:
Q  2 tcttcaattatgattttgatttgatgattacatgagttctttagttgattgccatga 58  Q
    ||||||||| ||||| |||||||||||||||||  ||| ||||||||||||| ||||    
T  8415 tcttcaattctgattctgatttgatgattacatatgttttttagttgattgcaatga 8359  T

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Target: scaffold0054 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 2940 - 2996
Alignment:
Q  2 tcttcaattatgattttgatttgatgattacatgagttctttagttgattgccatga 58  Q
    ||||||||| ||||| |||||||||||||||||  ||| ||||||||||||| ||||    
T  2940 tcttcaattctgattctgatttgatgattacatatgttttttagttgattgcaatga 2996  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 11657 - 11582
Alignment:
Q  247 atttagaggtcaatgagttagatccaaatttgatttatgatagaacactatgatgtcatttgatccatgtagtcgacc 324  Q
    ||||||| ||||||  ||| |||||||||||| |||  ||||||  ||||||| |||||||||||||||||| |||||    
T  11657 atttagaagtcaattggttggatccaaatttggttt--gatagagtactatgacgtcatttgatccatgtagccgacc 11582  T

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