View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3023R-Insertion-10 (Length: 455)
Name: NF3023R-Insertion-10
Description: NF3023R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3023R-Insertion-10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 416; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 8 - 455
Target Start/End: Original strand, 16961263 - 16961710
Alignment:
| Q |
8 |
aagagtaacaagatcattcactgaatttggcaaacttccactaatgaaatttttcttcatactaagcacaactaaaccatgaagtgagcctaaaatattt |
107 |
Q |
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| T |
16961263 |
aagagtaacaagatcattcactgaatttggtaaacttccactaatgaaatttttcttcatactaagcacaactaaaccatgaagtgagcctaaaatattt |
16961362 |
T |
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| Q |
108 |
ggaatttgaccattgaaatgattatcatcaagtactagtgattgaagattgttaagatgtgaaagctgagatggtatttctccactaaagtaatttgagc |
207 |
Q |
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| T |
16961363 |
ggaatttgaccattgaaatggttatcatcaagtactaatgattgaagattgttaagatgtgaaagttgagatggtatttctccactaaagtaatttgagc |
16961462 |
T |
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| Q |
208 |
taatgttaagtatttctagtgaagataattgagctattgtttcaggtagtggcccccataaaccaagagaaaccaaagagagtactttcaagcttgataa |
307 |
Q |
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| T |
16961463 |
taatgttaagtatttctagtgaagataattgagctattgtttcaggtagtggcccccataaaccaagtgaaaccaaagagagtactttcaagcttgataa |
16961562 |
T |
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| Q |
308 |
agtggaaagtgttgaaaagagtgtgtatgagttgaaattttgaggcaatgaagtaaactcattgttgtttccaacaacatgcaactgtgtaacattttct |
407 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
16961563 |
agtggaaagtgttgaaaagagtgtgtatgagttgaaattttgaggcaatgaggtgaactcattggtgtttccaacaacatgcaactgtgtaacattttct |
16961662 |
T |
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| Q |
408 |
tcatagcacactagtgttaaatatggagtaggttcaatgttgcagaaa |
455 |
Q |
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| T |
16961663 |
tcatagcacactagtgttaaatatggagtaggttcaatgttgcagaaa |
16961710 |
T |
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