View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3023_high_6 (Length: 318)

Name: NF3023_high_6
Description: NF3023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3023_high_6
NF3023_high_6
[»] chr5 (5 HSPs)
chr5 (32-276)||(1638521-1638765)
chr5 (123-197)||(1640025-1640099)
chr5 (272-303)||(3899920-3899951)
chr5 (272-303)||(16971225-16971256)
chr5 (270-303)||(16439219-16439252)
[»] chr4 (7 HSPs)
chr4 (270-303)||(31430485-31430518)
chr4 (270-301)||(17285813-17285844)
chr4 (272-303)||(23444295-23444326)
chr4 (272-303)||(47661923-47661954)
chr4 (270-303)||(50384129-50384162)
chr4 (270-303)||(52028630-52028663)
chr4 (270-303)||(53954634-53954667)
[»] chr1 (10 HSPs)
chr1 (270-302)||(34062291-34062323)
chr1 (272-303)||(21630068-21630099)
chr1 (272-303)||(28395663-28395694)
chr1 (272-303)||(48993943-48993974)
chr1 (273-303)||(17127591-17127621)
chr1 (270-303)||(1819513-1819546)
chr1 (270-303)||(19711204-19711237)
chr1 (274-303)||(46334027-46334056)
chr1 (270-303)||(48823909-48823942)
chr1 (270-302)||(8337933-8337965)
[»] chr8 (4 HSPs)
chr8 (272-303)||(5033242-5033273)
chr8 (272-303)||(35440995-35441026)
chr8 (272-302)||(10086839-10086869)
chr8 (270-303)||(6296629-6296662)
[»] chr7 (4 HSPs)
chr7 (272-303)||(15027623-15027654)
chr7 (272-302)||(11016951-11016981)
chr7 (270-303)||(42628319-42628352)
chr7 (266-302)||(7671993-7672029)
[»] chr2 (3 HSPs)
chr2 (272-303)||(16514505-16514536)
chr2 (270-303)||(2828665-2828698)
chr2 (270-303)||(38933611-38933644)
[»] scaffold0047 (1 HSPs)
scaffold0047 (270-303)||(63838-63871)
[»] scaffold0016 (1 HSPs)
scaffold0016 (274-303)||(49731-49760)
[»] chr6 (3 HSPs)
chr6 (270-303)||(24618682-24618715)
chr6 (270-303)||(31654329-31654362)
chr6 (270-302)||(2315328-2315360)
[»] chr3 (2 HSPs)
chr3 (270-303)||(33689257-33689290)
chr3 (270-302)||(47677337-47677369)
[»] scaffold0481 (1 HSPs)
scaffold0481 (270-302)||(2911-2943)


Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 32 - 276
Target Start/End: Complemental strand, 1638765 - 1638521
Alignment:
Q  32 gaggtctccctcttggtgaagaatggtcaatggcaatgagaagtaatgcaaaatgcaatactgtcagaatcattatggagattaagatgcttgagggaaa 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1638765 gaggtctccctcttggtgaagaatggtcaatggcaatgagaagtaatgcaaaatgcaatactgtcagaatcattatggagattaagatgcttgagggaaa 1638666  T
Q  132 ctcatcattagatgcatcctttatggtgatatttccgaagttttcaatttatgtattcataatacaagaacttgaaacacaaatgaaaaacaggtttttt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1638665 ctcatcattagatgcatcctttatggtgatatttccgaagttttcaatttatgtattcataatacaagaacttgaaacacaaatgaaaaacaggtttttt 1638566  T
Q  232 ccaaatttaatgtcaactttctcattgcaggaagtacctgggtga 276  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  1638565 ccaaatttaatgtcaactttctcattgcaggaagcacctgggtga 1638521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 1640099 - 1640025
Alignment:
Q  123 tgagggaaactcatcattagatgcatcctttatggtgatatttccgaagttttcaatttatgtattcataataca 197  Q
    |||| ||||||||| |||| || |||||||||||||||||| ||| | ||||||||||||||||| |||||||||    
T  1640099 tgagagaaactcatgattatattcatcctttatggtgatatgtcccatgttttcaatttatgtatccataataca 1640025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 3899951 - 3899920
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  3899951 ggtgacattgaccaatcacaatgtcacaatgc 3899920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 16971256 - 16971225
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  16971256 ggtgacattgaccaatcacaatgtcacaatgc 16971225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 16439252 - 16439219
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||| ||||||||||||||||||||    
T  16439252 tgggtgacattgatcaatcacaatgtcacaatgc 16439219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 31430485 - 31430518
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||||    
T  31430485 tgggtgacattgaccaatcacaatgtcacaatgc 31430518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 301
Target Start/End: Complemental strand, 17285844 - 17285813
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaat 301  Q
    ||||||||||||||||||||||||||||||||    
T  17285844 tgggtgacattgaccaatcacaatgtcacaat 17285813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Original strand, 23444295 - 23444326
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  23444295 ggtgacattgaccaatcacaatgtcacaatgc 23444326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 47661954 - 47661923
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  47661954 ggtgacattgaccaatcacaatgtcacaatgc 47661923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 50384129 - 50384162
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  50384129 tgggtgacattggccaatcacaatgtcacaatgc 50384162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 52028663 - 52028630
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  52028663 tgggtgacattggccaatcacaatgtcacaatgc 52028630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 53954634 - 53954667
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  53954634 tgggtgacattggccaatcacaatgtcacaatgc 53954667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 34062323 - 34062291
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatg 302  Q
    |||||||||||||||||||||||||||||||||    
T  34062323 tgggtgacattgaccaatcacaatgtcacaatg 34062291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Original strand, 21630068 - 21630099
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  21630068 ggtgacattgaccaatcacaatgtcacaatgc 21630099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Original strand, 28395663 - 28395694
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  28395663 ggtgacattgaccaatcacaatgtcacaatgc 28395694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Original strand, 48993943 - 48993974
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  48993943 ggtgacattgaccaatcacaatgtcacaatgc 48993974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 303
Target Start/End: Original strand, 17127591 - 17127621
Alignment:
Q  273 gtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||||||||||||||||||||||    
T  17127591 gtgacattgaccaatcacaatgtcacaatgc 17127621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 1819513 - 1819546
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||| ||||||||||||||||||||    
T  1819513 tgggtgacattgatcaatcacaatgtcacaatgc 1819546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 19711204 - 19711237
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||||||||||||||||| |||||||    
T  19711204 tgggtgacattgaccaatcacaatgttacaatgc 19711237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 303
Target Start/End: Complemental strand, 46334056 - 46334027
Alignment:
Q  274 tgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||    
T  46334056 tgacattgaccaatcacaatgtcacaatgc 46334027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 48823909 - 48823942
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  48823909 tgggtgacattggccaatcacaatgtcacaatgc 48823942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 8337965 - 8337933
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatg 302  Q
    ||||||||||||||||||||||||| |||||||    
T  8337965 tgggtgacattgaccaatcacaatgccacaatg 8337933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 5033273 - 5033242
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  5033273 ggtgacattgaccaatcacaatgtcacaatgc 5033242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Original strand, 35440995 - 35441026
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  35440995 ggtgacattgaccaatcacaatgtcacaatgc 35441026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 10086869 - 10086839
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatg 302  Q
    |||||||||||||||||||||||||||||||    
T  10086869 ggtgacattgaccaatcacaatgtcacaatg 10086839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 6296629 - 6296662
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||||||||||||||||||| |||||    
T  6296629 tgggtgacattgaccaatcacaatgtcataatgc 6296662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000007; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 15027654 - 15027623
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  15027654 ggtgacattgaccaatcacaatgtcacaatgc 15027623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 11016981 - 11016951
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatg 302  Q
    |||||||||||||||||||||||||||||||    
T  11016981 ggtgacattgaccaatcacaatgtcacaatg 11016951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 42628319 - 42628352
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||| ||||||||    
T  42628319 tgggtgacattgaccaatcacaatgccacaatgc 42628352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 302
Target Start/End: Complemental strand, 7672029 - 7671993
Alignment:
Q  266 tacctgggtgacattgaccaatcacaatgtcacaatg 302  Q
    |||||||||||||||| |||||||||||| |||||||    
T  7672029 tacctgggtgacattggccaatcacaatgccacaatg 7671993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000007; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 16514536 - 16514505
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  16514536 ggtgacattgaccaatcacaatgtcacaatgc 16514505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 2828698 - 2828665
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  2828698 tgggtgacattggccaatcacaatgtcacaatgc 2828665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 38933611 - 38933644
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||| ||||||||    
T  38933611 tgggtgacattgaccaatcacaatgccacaatgc 38933644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 63871 - 63838
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  63871 tgggtgacattggccaatcacaatgtcacaatgc 63838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 303
Target Start/End: Original strand, 49731 - 49760
Alignment:
Q  274 tgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||    
T  49731 tgacattgaccaatcacaatgtcacaatgc 49760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 24618715 - 24618682
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||| |||||||||||||||||||||||||    
T  24618715 tgggtgacgttgaccaatcacaatgtcacaatgc 24618682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 31654329 - 31654362
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  31654329 tgggtgacattggccaatcacaatgtcacaatgc 31654362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 2315328 - 2315360
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatg 302  Q
    ||||||||||||| |||||||||||||||||||    
T  2315328 tgggtgacattgatcaatcacaatgtcacaatg 2315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 33689290 - 33689257
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  33689290 tgggtgacattggccaatcacaatgtcacaatgc 33689257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 47677369 - 47677337
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatg 302  Q
    ||||||||||||| |||||||||||||||||||    
T  47677369 tgggtgacattgatcaatcacaatgtcacaatg 47677337  T

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Target: scaffold0481 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 2911 - 2943
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatg 302  Q
    ||||||| |||||||||||||||||||||||||    
T  2911 tgggtgatattgaccaatcacaatgtcacaatg 2943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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