View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3023_low_11 (Length: 318)

Name: NF3023_low_11
Description: NF3023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3023_low_11
NF3023_low_11
[»] chr5 (5 HSPs)
chr5 (32-276)||(1638521-1638765)
chr5 (123-197)||(1640025-1640099)
chr5 (272-303)||(3899920-3899951)
chr5 (272-303)||(16971225-16971256)
chr5 (270-303)||(16439219-16439252)
[»] chr4 (7 HSPs)
chr4 (270-303)||(31430485-31430518)
chr4 (270-301)||(17285813-17285844)
chr4 (272-303)||(23444295-23444326)
chr4 (272-303)||(47661923-47661954)
chr4 (270-303)||(50384129-50384162)
chr4 (270-303)||(52028630-52028663)
chr4 (270-303)||(53954634-53954667)
[»] chr1 (10 HSPs)
chr1 (270-302)||(34062291-34062323)
chr1 (272-303)||(21630068-21630099)
chr1 (272-303)||(28395663-28395694)
chr1 (272-303)||(48993943-48993974)
chr1 (273-303)||(17127591-17127621)
chr1 (270-303)||(1819513-1819546)
chr1 (270-303)||(19711204-19711237)
chr1 (274-303)||(46334027-46334056)
chr1 (270-303)||(48823909-48823942)
chr1 (270-302)||(8337933-8337965)
[»] chr8 (4 HSPs)
chr8 (272-303)||(5033242-5033273)
chr8 (272-303)||(35440995-35441026)
chr8 (272-302)||(10086839-10086869)
chr8 (270-303)||(6296629-6296662)
[»] chr7 (4 HSPs)
chr7 (272-303)||(15027623-15027654)
chr7 (272-302)||(11016951-11016981)
chr7 (270-303)||(42628319-42628352)
chr7 (266-302)||(7671993-7672029)
[»] chr2 (3 HSPs)
chr2 (272-303)||(16514505-16514536)
chr2 (270-303)||(2828665-2828698)
chr2 (270-303)||(38933611-38933644)
[»] scaffold0047 (1 HSPs)
scaffold0047 (270-303)||(63838-63871)
[»] scaffold0016 (1 HSPs)
scaffold0016 (274-303)||(49731-49760)
[»] chr6 (3 HSPs)
chr6 (270-303)||(24618682-24618715)
chr6 (270-303)||(31654329-31654362)
chr6 (270-302)||(2315328-2315360)
[»] chr3 (2 HSPs)
chr3 (270-303)||(33689257-33689290)
chr3 (270-302)||(47677337-47677369)
[»] scaffold0481 (1 HSPs)
scaffold0481 (270-302)||(2911-2943)


Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 32 - 276
Target Start/End: Complemental strand, 1638765 - 1638521
Alignment:
Q  32 gaggtctccctcttggtgaagaatggtcaatggcaatgagaagtaatgcaaaatgcaatactgtcagaatcattatggagattaagatgcttgagggaaa 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1638765 gaggtctccctcttggtgaagaatggtcaatggcaatgagaagtaatgcaaaatgcaatactgtcagaatcattatggagattaagatgcttgagggaaa 1638666  T
Q  132 ctcatcattagatgcatcctttatggtgatatttccgaagttttcaatttatgtattcataatacaagaacttgaaacacaaatgaaaaacaggtttttt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1638665 ctcatcattagatgcatcctttatggtgatatttccgaagttttcaatttatgtattcataatacaagaacttgaaacacaaatgaaaaacaggtttttt 1638566  T
Q  232 ccaaatttaatgtcaactttctcattgcaggaagtacctgggtga 276  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  1638565 ccaaatttaatgtcaactttctcattgcaggaagcacctgggtga 1638521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 1640099 - 1640025
Alignment:
Q  123 tgagggaaactcatcattagatgcatcctttatggtgatatttccgaagttttcaatttatgtattcataataca 197  Q
    |||| ||||||||| |||| || |||||||||||||||||| ||| | ||||||||||||||||| |||||||||    
T  1640099 tgagagaaactcatgattatattcatcctttatggtgatatgtcccatgttttcaatttatgtatccataataca 1640025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 3899951 - 3899920
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  3899951 ggtgacattgaccaatcacaatgtcacaatgc 3899920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 16971256 - 16971225
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  16971256 ggtgacattgaccaatcacaatgtcacaatgc 16971225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 16439252 - 16439219
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||| ||||||||||||||||||||    
T  16439252 tgggtgacattgatcaatcacaatgtcacaatgc 16439219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 31430485 - 31430518
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||||    
T  31430485 tgggtgacattgaccaatcacaatgtcacaatgc 31430518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 301
Target Start/End: Complemental strand, 17285844 - 17285813
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaat 301  Q
    ||||||||||||||||||||||||||||||||    
T  17285844 tgggtgacattgaccaatcacaatgtcacaat 17285813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Original strand, 23444295 - 23444326
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  23444295 ggtgacattgaccaatcacaatgtcacaatgc 23444326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 47661954 - 47661923
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  47661954 ggtgacattgaccaatcacaatgtcacaatgc 47661923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 50384129 - 50384162
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  50384129 tgggtgacattggccaatcacaatgtcacaatgc 50384162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 52028663 - 52028630
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  52028663 tgggtgacattggccaatcacaatgtcacaatgc 52028630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 53954634 - 53954667
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  53954634 tgggtgacattggccaatcacaatgtcacaatgc 53954667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 34062323 - 34062291
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatg 302  Q
    |||||||||||||||||||||||||||||||||    
T  34062323 tgggtgacattgaccaatcacaatgtcacaatg 34062291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Original strand, 21630068 - 21630099
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  21630068 ggtgacattgaccaatcacaatgtcacaatgc 21630099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Original strand, 28395663 - 28395694
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  28395663 ggtgacattgaccaatcacaatgtcacaatgc 28395694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Original strand, 48993943 - 48993974
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  48993943 ggtgacattgaccaatcacaatgtcacaatgc 48993974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 303
Target Start/End: Original strand, 17127591 - 17127621
Alignment:
Q  273 gtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||||||||||||||||||||||    
T  17127591 gtgacattgaccaatcacaatgtcacaatgc 17127621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 1819513 - 1819546
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||| ||||||||||||||||||||    
T  1819513 tgggtgacattgatcaatcacaatgtcacaatgc 1819546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 19711204 - 19711237
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||||||||||||||||| |||||||    
T  19711204 tgggtgacattgaccaatcacaatgttacaatgc 19711237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 303
Target Start/End: Complemental strand, 46334056 - 46334027
Alignment:
Q  274 tgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||    
T  46334056 tgacattgaccaatcacaatgtcacaatgc 46334027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 48823909 - 48823942
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  48823909 tgggtgacattggccaatcacaatgtcacaatgc 48823942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 8337965 - 8337933
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatg 302  Q
    ||||||||||||||||||||||||| |||||||    
T  8337965 tgggtgacattgaccaatcacaatgccacaatg 8337933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 5033273 - 5033242
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  5033273 ggtgacattgaccaatcacaatgtcacaatgc 5033242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Original strand, 35440995 - 35441026
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  35440995 ggtgacattgaccaatcacaatgtcacaatgc 35441026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 10086869 - 10086839
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatg 302  Q
    |||||||||||||||||||||||||||||||    
T  10086869 ggtgacattgaccaatcacaatgtcacaatg 10086839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 6296629 - 6296662
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||||||||||||||||||| |||||    
T  6296629 tgggtgacattgaccaatcacaatgtcataatgc 6296662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000007; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 15027654 - 15027623
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  15027654 ggtgacattgaccaatcacaatgtcacaatgc 15027623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 302
Target Start/End: Complemental strand, 11016981 - 11016951
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatg 302  Q
    |||||||||||||||||||||||||||||||    
T  11016981 ggtgacattgaccaatcacaatgtcacaatg 11016951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 42628319 - 42628352
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||| ||||||||    
T  42628319 tgggtgacattgaccaatcacaatgccacaatgc 42628352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 302
Target Start/End: Complemental strand, 7672029 - 7671993
Alignment:
Q  266 tacctgggtgacattgaccaatcacaatgtcacaatg 302  Q
    |||||||||||||||| |||||||||||| |||||||    
T  7672029 tacctgggtgacattggccaatcacaatgccacaatg 7671993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000007; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 303
Target Start/End: Complemental strand, 16514536 - 16514505
Alignment:
Q  272 ggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||||    
T  16514536 ggtgacattgaccaatcacaatgtcacaatgc 16514505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 2828698 - 2828665
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  2828698 tgggtgacattggccaatcacaatgtcacaatgc 2828665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 38933611 - 38933644
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||| ||||||||    
T  38933611 tgggtgacattgaccaatcacaatgccacaatgc 38933644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 63871 - 63838
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  63871 tgggtgacattggccaatcacaatgtcacaatgc 63838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 303
Target Start/End: Original strand, 49731 - 49760
Alignment:
Q  274 tgacattgaccaatcacaatgtcacaatgc 303  Q
    ||||||||||||||||||||||||||||||    
T  49731 tgacattgaccaatcacaatgtcacaatgc 49760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 24618715 - 24618682
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||| |||||||||||||||||||||||||    
T  24618715 tgggtgacgttgaccaatcacaatgtcacaatgc 24618682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Original strand, 31654329 - 31654362
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  31654329 tgggtgacattggccaatcacaatgtcacaatgc 31654362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 2315328 - 2315360
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatg 302  Q
    ||||||||||||| |||||||||||||||||||    
T  2315328 tgggtgacattgatcaatcacaatgtcacaatg 2315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 33689290 - 33689257
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatgc 303  Q
    |||||||||||| |||||||||||||||||||||    
T  33689290 tgggtgacattggccaatcacaatgtcacaatgc 33689257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 47677369 - 47677337
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatg 302  Q
    ||||||||||||| |||||||||||||||||||    
T  47677369 tgggtgacattgatcaatcacaatgtcacaatg 47677337  T

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Target: scaffold0481 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 2911 - 2943
Alignment:
Q  270 tgggtgacattgaccaatcacaatgtcacaatg 302  Q
    ||||||| |||||||||||||||||||||||||    
T  2911 tgggtgatattgaccaatcacaatgtcacaatg 2943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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