View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3023_low_12 (Length: 312)
Name: NF3023_low_12
Description: NF3023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3023_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 205 - 293
Target Start/End: Original strand, 5006518 - 5006606
Alignment:
| Q |
205 |
gtgtgattgtacctgataagataaataatattcagtgcggttgttctagtgtttgaaagctctggaacggtgtggatttatacatgcgg |
293 |
Q |
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| T |
5006518 |
gtgtgattgtacctgatcagataaataatgttcagcgcggttgttctagtgtttgaaagctctggaacggtgtggatttatacatgcgg |
5006606 |
T |
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