View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3023_low_22 (Length: 209)

Name: NF3023_low_22
Description: NF3023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3023_low_22
NF3023_low_22
[»] chr7 (61 HSPs)
chr7 (1-209)||(28505190-28505398)
chr7 (1-209)||(34200807-34201015)
chr7 (1-209)||(11995919-11996127)
chr7 (1-209)||(15754778-15754987)
chr7 (62-209)||(16495423-16495570)
chr7 (53-209)||(44014199-44014354)
chr7 (65-209)||(16219670-16219817)
chr7 (65-209)||(67766-67911)
chr7 (65-209)||(18005667-18005813)
chr7 (65-209)||(811084-811231)
chr7 (65-209)||(47831828-47831975)
chr7 (115-209)||(2280125-2280219)
chr7 (65-209)||(16056349-16056495)
chr7 (65-209)||(22072934-22073083)
chr7 (153-209)||(16386292-16386348)
chr7 (153-208)||(12255837-12255892)
chr7 (46-206)||(12901347-12901511)
chr7 (129-209)||(10063838-10063918)
chr7 (153-209)||(13647346-13647401)
chr7 (131-207)||(19486766-19486842)
chr7 (55-209)||(20220132-20220288)
chr7 (132-209)||(38227502-38227578)
chr7 (153-209)||(3564409-3564464)
chr7 (153-209)||(12698852-12698907)
chr7 (158-209)||(1868044-1868095)
chr7 (132-204)||(48991206-48991280)
chr7 (159-209)||(40443412-40443462)
chr7 (158-207)||(15008548-15008597)
chr7 (132-209)||(18456436-18456512)
chr7 (160-209)||(27847881-27847930)
chr7 (161-209)||(9177718-9177766)
chr7 (158-209)||(9509210-9509260)
chr7 (159-209)||(14044767-14044817)
chr7 (159-209)||(14354797-14354847)
chr7 (168-209)||(13831391-13831431)
chr7 (177-209)||(456339-456371)
chr7 (177-209)||(3386351-3386383)
chr7 (153-209)||(10589060-10589115)
chr7 (177-209)||(11393399-11393431)
chr7 (177-209)||(11972514-11972546)
chr7 (177-209)||(13869364-13869396)
chr7 (177-209)||(14949234-14949266)
chr7 (177-209)||(15144105-15144137)
chr7 (177-209)||(15376825-15376857)
chr7 (177-209)||(16213702-16213734)
chr7 (177-209)||(16232538-16232570)
chr7 (177-209)||(16410077-16410109)
chr7 (177-209)||(17062027-17062059)
chr7 (177-209)||(18430730-18430762)
chr7 (177-209)||(18640290-18640322)
chr7 (177-209)||(20110574-20110606)
chr7 (177-209)||(20385235-20385267)
chr7 (177-209)||(21189707-21189739)
chr7 (177-209)||(24275189-24275221)
chr7 (177-209)||(24702256-24702288)
chr7 (177-209)||(24704706-24704738)
chr7 (153-209)||(26212017-26212072)
chr7 (177-209)||(32125509-32125541)
chr7 (177-209)||(41522935-41522967)
chr7 (177-209)||(41525397-41525429)
chr7 (153-209)||(48273410-48273465)
[»] scaffold0046 (4 HSPs)
scaffold0046 (1-209)||(11313-11521)
scaffold0046 (1-209)||(2018-2226)
scaffold0046 (153-209)||(28435-28490)
scaffold0046 (174-209)||(4573-4608)
[»] chr8 (55 HSPs)
chr8 (1-209)||(5866166-5866374)
chr8 (1-209)||(17140937-17141145)
chr8 (1-209)||(21491016-21491224)
chr8 (33-209)||(21249405-21249582)
chr8 (33-209)||(21255243-21255420)
chr8 (1-209)||(26355589-26355798)
chr8 (65-209)||(21285618-21285765)
chr8 (65-209)||(38855205-38855351)
chr8 (65-209)||(6520389-6520535)
chr8 (65-209)||(23760798-23760944)
chr8 (131-209)||(17612132-17612210)
chr8 (115-209)||(21673725-21673819)
chr8 (158-209)||(21396029-21396080)
chr8 (158-209)||(21790522-21790573)
chr8 (115-209)||(22626757-22626850)
chr8 (152-209)||(983449-983506)
chr8 (129-209)||(13508105-13508185)
chr8 (129-209)||(13597637-13597717)
chr8 (158-209)||(21389499-21389550)
chr8 (158-209)||(21778825-21778876)
chr8 (152-209)||(16199687-16199744)
chr8 (132-209)||(31971278-31971354)
chr8 (159-209)||(17267044-17267094)
chr8 (1-209)||(20498583-20498795)
chr8 (153-209)||(7372799-7372854)
chr8 (153-209)||(18818454-18818509)
chr8 (153-209)||(18879276-18879331)
chr8 (153-209)||(21919045-21919100)
chr8 (153-209)||(23406400-23406455)
chr8 (158-209)||(28649094-28649144)
chr8 (159-205)||(17439557-17439603)
chr8 (159-209)||(24353041-24353091)
chr8 (159-209)||(37116368-37116418)
chr8 (159-209)||(45131047-45131096)
chr8 (160-209)||(21923980-21924028)
chr8 (153-209)||(6759279-6759334)
chr8 (153-209)||(16092387-16092442)
chr8 (158-206)||(19154936-19154984)
chr8 (153-209)||(20536229-20536284)
chr8 (177-209)||(41598206-41598238)
chr8 (159-209)||(22525579-22525628)
chr8 (132-209)||(22875086-22875162)
chr8 (177-209)||(1484420-1484452)
chr8 (177-209)||(4542485-4542517)
chr8 (177-209)||(5853404-5853436)
chr8 (177-209)||(14409556-14409588)
chr8 (177-209)||(15070576-15070608)
chr8 (177-209)||(16413428-16413460)
chr8 (177-209)||(19896283-19896315)
chr8 (177-209)||(20046307-20046339)
chr8 (177-209)||(20403245-20403277)
chr8 (177-209)||(22001771-22001803)
chr8 (177-209)||(26219735-26219767)
chr8 (177-209)||(26225359-26225391)
chr8 (177-209)||(45290807-45290839)
[»] chr5 (43 HSPs)
chr5 (1-209)||(19660727-19660935)
chr5 (3-209)||(22959426-22959632)
chr5 (1-209)||(21565563-21565774)
chr5 (1-209)||(19668919-19669129)
chr5 (65-209)||(21329450-21329597)
chr5 (129-209)||(36314598-36314678)
chr5 (71-209)||(26011994-26012135)
chr5 (52-209)||(20026880-20027041)
chr5 (65-209)||(21502109-21502256)
chr5 (132-209)||(22144070-22144147)
chr5 (153-209)||(24529241-24529296)
chr5 (153-209)||(25421553-25421608)
chr5 (153-209)||(8286888-8286943)
chr5 (153-209)||(21729109-21729164)
chr5 (153-209)||(21808434-21808489)
chr5 (153-209)||(21997579-21997634)
chr5 (131-207)||(40725876-40725952)
chr5 (158-209)||(22178270-22178321)
chr5 (62-109)||(36314672-36314719)
chr5 (158-209)||(37723924-37723975)
chr5 (132-209)||(22412205-22412281)
chr5 (153-209)||(1096488-1096543)
chr5 (153-209)||(23390541-23390596)
chr5 (153-209)||(25431415-25431470)
chr5 (159-209)||(21293020-21293069)
chr5 (176-209)||(20909030-20909063)
chr5 (132-209)||(24493590-24493666)
chr5 (160-209)||(26732884-26732932)
chr5 (177-209)||(264880-264912)
chr5 (177-209)||(2154726-2154758)
chr5 (177-209)||(10733052-10733084)
chr5 (177-209)||(11581311-11581343)
chr5 (153-209)||(13025332-13025387)
chr5 (153-209)||(13095516-13095571)
chr5 (177-209)||(20902121-20902153)
chr5 (177-209)||(20918060-20918092)
chr5 (153-209)||(22075040-22075095)
chr5 (177-209)||(23064529-23064561)
chr5 (177-209)||(29329952-29329984)
chr5 (177-209)||(36154892-36154924)
chr5 (177-209)||(38619452-38619484)
chr5 (177-209)||(39245154-39245186)
chr5 (177-209)||(39363402-39363434)
[»] chr2 (51 HSPs)
chr2 (9-205)||(23071849-23072045)
chr2 (65-209)||(28405997-28406144)
chr2 (71-209)||(7679606-7679746)
chr2 (115-209)||(25175871-25175965)
chr2 (129-209)||(19671851-19671931)
chr2 (128-209)||(22134226-22134306)
chr2 (153-209)||(298859-298915)
chr2 (64-209)||(18786854-18787003)
chr2 (132-209)||(38138-38214)
chr2 (132-209)||(23708642-23708719)
chr2 (153-209)||(22105430-22105485)
chr2 (158-209)||(20309129-20309180)
chr2 (132-209)||(7756-7833)
chr2 (152-209)||(23103439-23103495)
chr2 (153-209)||(23060534-23060589)
chr2 (153-209)||(23076463-23076518)
chr2 (153-209)||(23285886-23285941)
chr2 (158-209)||(22413187-22413238)
chr2 (158-209)||(23207298-23207349)
chr2 (132-209)||(23654409-23654486)
chr2 (159-209)||(25108908-25108958)
chr2 (160-209)||(22731286-22731334)
chr2 (159-209)||(23791294-23791344)
chr2 (159-209)||(20520243-20520293)
chr2 (159-209)||(23287384-23287433)
chr2 (160-209)||(26392403-26392451)
chr2 (168-209)||(32215025-32215065)
chr2 (168-209)||(45029958-45029998)
chr2 (177-209)||(571415-571447)
chr2 (177-209)||(6726013-6726045)
chr2 (153-209)||(8946678-8946733)
chr2 (177-209)||(18808961-18808993)
chr2 (177-209)||(21155172-21155204)
chr2 (177-209)||(22337136-22337168)
chr2 (177-209)||(22738247-22738279)
chr2 (177-209)||(23040257-23040289)
chr2 (177-209)||(23130880-23130912)
chr2 (177-209)||(23133347-23133379)
chr2 (177-209)||(23135608-23135640)
chr2 (177-209)||(23709644-23709676)
chr2 (177-209)||(23712125-23712157)
chr2 (177-209)||(24367792-24367824)
chr2 (177-209)||(24643062-24643094)
chr2 (177-209)||(26505397-26505429)
chr2 (177-209)||(26507875-26507907)
chr2 (177-209)||(28577117-28577149)
chr2 (161-209)||(32451981-32452029)
chr2 (177-209)||(34402634-34402666)
chr2 (177-209)||(38967392-38967424)
chr2 (177-209)||(39682331-39682363)
chr2 (177-209)||(43137317-43137349)
[»] chr1 (40 HSPs)
chr1 (1-209)||(20918625-20918833)
chr1 (62-209)||(14295504-14295651)
chr1 (31-209)||(20248300-20248478)
chr1 (1-209)||(33681028-33681239)
chr1 (45-177)||(22130843-22130975)
chr1 (1-209)||(52927871-52928070)
chr1 (62-162)||(51130632-51130732)
chr1 (65-209)||(22921823-22921969)
chr1 (46-209)||(22237648-22237814)
chr1 (1-209)||(21754066-21754267)
chr1 (127-209)||(16758670-16758754)
chr1 (111-209)||(35261080-35261178)
chr1 (132-209)||(21861593-21861670)
chr1 (153-209)||(45574932-45574987)
chr1 (45-209)||(21896188-21896356)
chr1 (154-204)||(38801433-38801483)
chr1 (153-209)||(34509801-34509856)
chr1 (153-209)||(50210258-50210313)
chr1 (159-209)||(20847205-20847254)
chr1 (159-209)||(26064959-26065009)
chr1 (159-209)||(50614167-50614217)
chr1 (159-209)||(50621995-50622045)
chr1 (161-209)||(16368338-16368386)
chr1 (161-209)||(20454606-20454653)
chr1 (153-209)||(21026701-21026756)
chr1 (153-209)||(27250774-27250829)
chr1 (168-209)||(21707185-21707225)
chr1 (168-209)||(21711727-21711767)
chr1 (168-209)||(22123171-22123212)
chr1 (177-209)||(13212974-13213006)
chr1 (177-209)||(13988884-13988916)
chr1 (128-204)||(21161742-21161817)
chr1 (177-209)||(21342114-21342146)
chr1 (177-209)||(21346979-21347011)
chr1 (177-209)||(21840785-21840817)
chr1 (177-209)||(21923403-21923435)
chr1 (177-209)||(23593847-23593879)
chr1 (177-209)||(29298155-29298187)
chr1 (177-209)||(29776706-29776738)
chr1 (177-209)||(31612331-31612363)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-209)||(15682-15890)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-209)||(34144-34352)
[»] chr6 (51 HSPs)
chr6 (1-209)||(28496363-28496571)
chr6 (1-209)||(29808774-29808982)
chr6 (1-209)||(1561324-1561533)
chr6 (1-209)||(19652216-19652425)
chr6 (129-209)||(27333238-27333318)
chr6 (129-209)||(27393978-27394058)
chr6 (65-209)||(23019427-23019574)
chr6 (65-209)||(9098466-9098614)
chr6 (1-209)||(19668392-19668604)
chr6 (153-209)||(25644341-25644397)
chr6 (128-207)||(4185840-4185919)
chr6 (132-209)||(20109159-20109236)
chr6 (162-209)||(22831524-22831571)
chr6 (158-209)||(35245607-35245658)
chr6 (167-209)||(11185526-11185568)
chr6 (159-209)||(23076751-23076801)
chr6 (159-209)||(35008169-35008219)
chr6 (158-207)||(16920679-16920728)
chr6 (132-209)||(19303564-19303640)
chr6 (132-209)||(20076721-20076797)
chr6 (131-207)||(8227533-8227609)
chr6 (153-209)||(16496265-16496320)
chr6 (153-209)||(20638328-20638383)
chr6 (153-209)||(29060561-29060616)
chr6 (128-207)||(4186390-4186469)
chr6 (132-209)||(17287819-17287896)
chr6 (128-171)||(22080757-22080800)
chr6 (158-209)||(33443068-33443118)
chr6 (177-209)||(2291292-2291324)
chr6 (177-209)||(3852129-3852161)
chr6 (128-172)||(4668230-4668274)
chr6 (128-172)||(4675077-4675121)
chr6 (177-209)||(8055047-8055079)
chr6 (177-209)||(12742335-12742367)
chr6 (177-209)||(18334704-18334736)
chr6 (177-209)||(18456737-18456769)
chr6 (177-209)||(18461897-18461929)
chr6 (177-209)||(18821912-18821944)
chr6 (177-209)||(19005064-19005096)
chr6 (177-209)||(19859031-19859063)
chr6 (161-209)||(20361013-20361060)
chr6 (153-209)||(22780272-22780327)
chr6 (177-209)||(22782245-22782277)
chr6 (177-209)||(24422565-24422597)
chr6 (177-209)||(25656647-25656679)
chr6 (177-209)||(25714438-25714470)
chr6 (177-209)||(25754827-25754859)
chr6 (177-209)||(26924752-26924784)
chr6 (177-209)||(30676822-30676854)
chr6 (177-209)||(33861812-33861844)
chr6 (177-209)||(33864296-33864328)
[»] chr4 (47 HSPs)
chr4 (1-192)||(16596686-16596877)
chr4 (1-209)||(15551838-15552045)
chr4 (1-209)||(12774028-12774229)
chr4 (128-209)||(39706307-39706388)
chr4 (1-209)||(13739-13951)
chr4 (1-209)||(43198441-43198655)
chr4 (1-209)||(8846377-8846604)
chr4 (46-209)||(12288143-12288310)
chr4 (153-209)||(52243240-52243296)
chr4 (158-209)||(17046508-17046559)
chr4 (152-209)||(16377565-16377621)
chr4 (153-209)||(3096314-3096369)
chr4 (153-209)||(7088898-7088953)
chr4 (153-209)||(7798795-7798850)
chr4 (153-209)||(12902778-12902833)
chr4 (153-209)||(52873412-52873467)
chr4 (152-209)||(14053344-14053401)
chr4 (132-209)||(16270259-16270335)
chr4 (160-209)||(22636456-22636504)
chr4 (161-209)||(6190483-6190531)
chr4 (153-209)||(23374404-23374459)
chr4 (177-209)||(54798822-54798854)
chr4 (158-209)||(46640505-46640556)
chr4 (159-209)||(53082202-53082252)
chr4 (177-209)||(12419-12451)
chr4 (177-209)||(1837621-1837653)
chr4 (153-209)||(6899912-6899967)
chr4 (177-209)||(7641294-7641326)
chr4 (153-209)||(7893724-7893779)
chr4 (177-209)||(8574935-8574967)
chr4 (177-209)||(12610968-12611000)
chr4 (177-209)||(14280334-14280366)
chr4 (177-209)||(15118464-15118496)
chr4 (177-209)||(15355437-15355469)
chr4 (177-209)||(18215386-18215418)
chr4 (177-209)||(18239531-18239563)
chr4 (177-209)||(19242717-19242749)
chr4 (177-209)||(19618284-19618316)
chr4 (177-209)||(23803377-23803409)
chr4 (153-205)||(44052854-44052905)
chr4 (177-209)||(44102232-44102264)
chr4 (177-209)||(44615306-44615338)
chr4 (177-209)||(44773199-44773231)
chr4 (177-209)||(44928992-44929024)
chr4 (177-209)||(50222451-50222483)
chr4 (177-209)||(51463980-51464012)
chr4 (177-209)||(52312528-52312560)
[»] chr3 (68 HSPs)
chr3 (1-209)||(13210218-13210427)
chr3 (2-209)||(12174152-12174359)
chr3 (1-209)||(16097349-16097560)
chr3 (1-209)||(16103801-16104011)
chr3 (1-209)||(32307698-32307899)
chr3 (1-209)||(9512941-9513139)
chr3 (1-209)||(9520916-9521114)
chr3 (65-209)||(15470945-15471092)
chr3 (128-209)||(49668095-49668176)
chr3 (1-115)||(49389519-49389633)
chr3 (115-209)||(52523733-52523829)
chr3 (65-209)||(14234508-14234655)
chr3 (1-193)||(1644573-1644757)
chr3 (129-209)||(23274708-23274788)
chr3 (129-209)||(24340743-24340823)
chr3 (140-209)||(27165268-27165337)
chr3 (132-209)||(53301574-53301651)
chr3 (153-209)||(26686908-26686963)
chr3 (131-207)||(37642287-37642363)
chr3 (132-209)||(14572610-14572686)
chr3 (153-209)||(12399230-12399285)
chr3 (153-209)||(20698480-20698535)
chr3 (165-209)||(28194711-28194755)
chr3 (132-209)||(18438555-18438632)
chr3 (159-209)||(22110402-22110452)
chr3 (132-209)||(23083384-23083461)
chr3 (159-209)||(43925979-43926029)
chr3 (132-209)||(11424783-11424859)
chr3 (153-206)||(43840956-43841008)
chr3 (153-209)||(13442295-13442350)
chr3 (153-209)||(14972875-14972930)
chr3 (165-209)||(17672644-17672687)
chr3 (153-209)||(42386431-42386486)
chr3 (1-68)||(12934201-12934268)
chr3 (158-209)||(37251217-37251268)
chr3 (161-206)||(606378-606423)
chr3 (132-209)||(24153232-24153308)
chr3 (177-209)||(6469246-6469278)
chr3 (177-209)||(7781459-7781491)
chr3 (177-209)||(8499536-8499568)
chr3 (177-209)||(8899112-8899144)
chr3 (177-209)||(9707719-9707751)
chr3 (177-209)||(10557003-10557035)
chr3 (158-209)||(12377942-12377993)
chr3 (177-209)||(12567578-12567610)
chr3 (177-209)||(13544043-13544075)
chr3 (177-209)||(15412447-15412479)
chr3 (177-209)||(15977533-15977565)
chr3 (177-209)||(16282923-16282955)
chr3 (177-209)||(17463196-17463228)
chr3 (177-209)||(17487877-17487909)
chr3 (177-209)||(17499359-17499391)
chr3 (177-209)||(17737254-17737286)
chr3 (177-209)||(21618467-21618499)
chr3 (131-207)||(22147547-22147623)
chr3 (177-209)||(28848723-28848755)
chr3 (177-209)||(29172695-29172727)
chr3 (177-209)||(34159344-34159376)
chr3 (177-209)||(36166616-36166648)
chr3 (177-209)||(38962003-38962035)
chr3 (177-209)||(41123908-41123940)
chr3 (153-209)||(43550568-43550623)
chr3 (177-209)||(45577950-45577982)
chr3 (177-209)||(45607019-45607051)
chr3 (177-209)||(50242840-50242872)
chr3 (177-209)||(53070765-53070797)
chr3 (177-209)||(55476509-55476541)
chr3 (177-209)||(55500960-55500992)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-183)||(29169-29354)
scaffold0218 (46-209)||(8007-8174)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-175)||(2334-2508)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-209)||(6833-7041)
[»] scaffold0184 (1 HSPs)
scaffold0184 (62-209)||(1022-1169)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-209)||(10430-10641)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-209)||(45681-45892)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-209)||(129926-130137)
scaffold0010 (153-206)||(60760-60813)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-209)||(160705-160915)
scaffold0001 (177-209)||(85692-85724)
scaffold0001 (177-209)||(501102-501134)
[»] scaffold1984 (1 HSPs)
scaffold1984 (25-209)||(150-337)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-209)||(1103-1314)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-209)||(22563-22770)
[»] scaffold0621 (2 HSPs)
scaffold0621 (65-209)||(6556-6702)
scaffold0621 (1-209)||(8487-8701)
[»] scaffold0102 (1 HSPs)
scaffold0102 (65-209)||(19285-19431)
[»] scaffold0023 (7 HSPs)
scaffold0023 (65-209)||(100395-100541)
scaffold0023 (65-209)||(40128-40274)
scaffold0023 (148-209)||(101520-101581)
scaffold0023 (157-209)||(119896-119948)
scaffold0023 (177-209)||(17552-17584)
scaffold0023 (177-209)||(44472-44504)
scaffold0023 (177-209)||(94429-94461)
[»] scaffold0333 (2 HSPs)
scaffold0333 (128-209)||(6632-6713)
scaffold0333 (128-209)||(14012-14093)
[»] scaffold0020 (1 HSPs)
scaffold0020 (128-209)||(15796-15877)
[»] scaffold0476 (1 HSPs)
scaffold0476 (65-209)||(12787-12934)
[»] scaffold0078 (1 HSPs)
scaffold0078 (72-209)||(10548-10688)
[»] scaffold0278 (1 HSPs)
scaffold0278 (65-209)||(5664-5810)
[»] scaffold0530 (1 HSPs)
scaffold0530 (65-209)||(987-1134)
[»] scaffold0243 (1 HSPs)
scaffold0243 (65-209)||(6076-6223)
[»] scaffold0207 (1 HSPs)
scaffold0207 (65-209)||(2599-2745)
[»] scaffold0100 (1 HSPs)
scaffold0100 (128-209)||(23902-23983)
[»] scaffold0028 (6 HSPs)
scaffold0028 (65-206)||(62222-62362)
scaffold0028 (1-209)||(132679-132883)
scaffold0028 (177-209)||(134229-134261)
scaffold0028 (177-209)||(136698-136730)
scaffold0028 (177-209)||(139167-139199)
scaffold0028 (177-209)||(144105-144137)
[»] scaffold0008 (1 HSPs)
scaffold0008 (65-209)||(14651-14797)
[»] scaffold0138 (1 HSPs)
scaffold0138 (65-209)||(12960-13107)
[»] scaffold2014 (1 HSPs)
scaffold2014 (127-209)||(1053-1135)
[»] scaffold0628 (1 HSPs)
scaffold0628 (115-209)||(2812-2906)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-209)||(53437-53649)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-209)||(32119-32323)
[»] scaffold0034 (1 HSPs)
scaffold0034 (65-209)||(32557-32703)
[»] scaffold0357 (3 HSPs)
scaffold0357 (115-209)||(13149-13243)
scaffold0357 (115-209)||(16106-16200)
scaffold0357 (159-209)||(2682-2732)
[»] scaffold0165 (1 HSPs)
scaffold0165 (115-209)||(27755-27849)
[»] scaffold0461 (1 HSPs)
scaffold0461 (131-203)||(11491-11563)
[»] scaffold0124 (1 HSPs)
scaffold0124 (131-203)||(38278-38350)
[»] scaffold0106 (3 HSPs)
scaffold0106 (158-209)||(7287-7338)
scaffold0106 (160-209)||(1310-1359)
scaffold0106 (177-209)||(15306-15338)
[»] scaffold0141 (1 HSPs)
scaffold0141 (132-209)||(39498-39574)
[»] scaffold0049 (1 HSPs)
scaffold0049 (132-209)||(75238-75314)
[»] scaffold0032 (1 HSPs)
scaffold0032 (158-209)||(51603-51654)
[»] scaffold0021 (2 HSPs)
scaffold0021 (158-209)||(174787-174838)
scaffold0021 (160-209)||(121787-121835)
[»] scaffold0003 (2 HSPs)
scaffold0003 (132-209)||(339972-340047)
scaffold0003 (177-209)||(158562-158594)
[»] scaffold0540 (1 HSPs)
scaffold0540 (132-209)||(3174-3250)
[»] scaffold0413 (1 HSPs)
scaffold0413 (132-209)||(12589-12666)
[»] scaffold0074 (1 HSPs)
scaffold0074 (132-209)||(38725-38802)
[»] scaffold0064 (1 HSPs)
scaffold0064 (160-209)||(47016-47065)
[»] scaffold1842 (1 HSPs)
scaffold1842 (153-209)||(1093-1148)
[»] scaffold0358 (1 HSPs)
scaffold0358 (153-209)||(4733-4788)
[»] scaffold0247 (1 HSPs)
scaffold0247 (129-209)||(18047-18127)
[»] scaffold0120 (3 HSPs)
scaffold0120 (153-209)||(16134-16189)
scaffold0120 (132-209)||(32980-33056)
scaffold0120 (132-209)||(45949-46025)
[»] scaffold0011 (2 HSPs)
scaffold0011 (153-209)||(168023-168078)
scaffold0011 (153-209)||(51934-51989)
[»] scaffold0908 (1 HSPs)
scaffold0908 (115-209)||(3192-3286)
[»] scaffold0351 (1 HSPs)
scaffold0351 (158-209)||(16303-16354)
[»] scaffold0022 (3 HSPs)
scaffold0022 (159-209)||(129021-129070)
scaffold0022 (161-207)||(78345-78391)
scaffold0022 (177-209)||(116448-116480)
[»] scaffold0718 (1 HSPs)
scaffold0718 (164-209)||(5183-5228)
[»] scaffold0427 (1 HSPs)
scaffold0427 (132-209)||(13518-13594)
[»] scaffold0507 (1 HSPs)
scaffold0507 (132-209)||(8082-8161)
[»] scaffold0292 (2 HSPs)
scaffold0292 (153-209)||(364-419)
scaffold0292 (153-209)||(3491-3546)
[»] scaffold0122 (2 HSPs)
scaffold0122 (153-209)||(26110-26165)
scaffold0122 (153-209)||(44752-44807)
[»] scaffold0056 (2 HSPs)
scaffold0056 (153-209)||(17262-17317)
scaffold0056 (177-209)||(79396-79428)
[»] scaffold0042 (1 HSPs)
scaffold0042 (153-209)||(24348-24403)
[»] scaffold0647 (1 HSPs)
scaffold0647 (153-209)||(6166-6224)
[»] scaffold0598 (1 HSPs)
scaffold0598 (158-209)||(1098-1149)
[»] scaffold0456 (1 HSPs)
scaffold0456 (158-209)||(10472-10523)
[»] scaffold0211 (2 HSPs)
scaffold0211 (1-76)||(28700-28775)
scaffold0211 (153-209)||(28813-28870)
[»] scaffold0123 (1 HSPs)
scaffold0123 (158-209)||(25127-25178)
[»] scaffold0070 (1 HSPs)
scaffold0070 (154-209)||(4545-4599)
[»] scaffold1257 (1 HSPs)
scaffold1257 (65-174)||(2172-2283)
[»] scaffold0113 (1 HSPs)
scaffold0113 (159-209)||(32088-32137)
[»] scaffold0420 (2 HSPs)
scaffold0420 (164-209)||(13793-13838)
scaffold0420 (158-209)||(6333-6384)
[»] scaffold0235 (1 HSPs)
scaffold0235 (153-206)||(11488-11540)
[»] scaffold0145 (3 HSPs)
scaffold0145 (132-209)||(32963-33039)
scaffold0145 (132-209)||(38782-38858)
scaffold0145 (177-209)||(9767-9799)
[»] scaffold0139 (1 HSPs)
scaffold0139 (158-207)||(38339-38388)
[»] scaffold0114 (1 HSPs)
scaffold0114 (132-209)||(15487-15563)
[»] scaffold0026 (2 HSPs)
scaffold0026 (132-209)||(25917-25993)
scaffold0026 (132-209)||(39879-39955)
[»] scaffold1403 (1 HSPs)
scaffold1403 (161-209)||(571-619)
[»] scaffold0403 (1 HSPs)
scaffold0403 (153-209)||(4870-4925)
[»] scaffold0193 (1 HSPs)
scaffold0193 (153-209)||(13232-13287)
[»] scaffold0016 (1 HSPs)
scaffold0016 (153-209)||(1872-1927)
[»] scaffold0080 (2 HSPs)
scaffold0080 (158-209)||(19934-19985)
scaffold0080 (132-209)||(39934-40010)
[»] scaffold0761 (1 HSPs)
scaffold0761 (177-209)||(4315-4347)
[»] scaffold0716 (1 HSPs)
scaffold0716 (177-209)||(4712-4744)
[»] scaffold0503 (1 HSPs)
scaffold0503 (177-209)||(11984-12016)
[»] scaffold0490 (1 HSPs)
scaffold0490 (153-209)||(1973-2028)
[»] scaffold0475 (1 HSPs)
scaffold0475 (128-172)||(9136-9180)
[»] scaffold0454 (1 HSPs)
scaffold0454 (177-209)||(10791-10823)
[»] scaffold0444 (1 HSPs)
scaffold0444 (177-209)||(13410-13442)
[»] scaffold0363 (1 HSPs)
scaffold0363 (177-209)||(9260-9292)
[»] scaffold0254 (1 HSPs)
scaffold0254 (177-209)||(20765-20797)
[»] scaffold0231 (1 HSPs)
scaffold0231 (177-209)||(22904-22936)
[»] scaffold0217 (1 HSPs)
scaffold0217 (177-209)||(16668-16700)
[»] scaffold0149 (1 HSPs)
scaffold0149 (177-209)||(29950-29982)
[»] scaffold0142 (1 HSPs)
scaffold0142 (177-209)||(16802-16834)
[»] scaffold0134 (1 HSPs)
scaffold0134 (177-209)||(37839-37871)
[»] scaffold0121 (1 HSPs)
scaffold0121 (132-209)||(8556-8629)
[»] scaffold0090 (1 HSPs)
scaffold0090 (158-209)||(2696-2747)
[»] scaffold0088 (1 HSPs)
scaffold0088 (153-209)||(20931-20987)
[»] scaffold0031 (1 HSPs)
scaffold0031 (177-209)||(20490-20522)


Alignment Details
Target: chr7 (Bit Score: 173; Significance: 3e-93; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 28505190 - 28505398
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  28505190 ctaagttgtttaccttgttgtcaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 28505289  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  28505290 agtttgataattgagttgctgatttatatccgatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 28505389  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  28505390 gtcggtcta 28505398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 34201015 - 34200807
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||| | |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  34201015 ctaagttgtttaccttgctgttaatgtcccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 34200916  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  34200915 agtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 34200816  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  34200815 gtcggtcta 34200807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 11995919 - 11996127
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||| |||||||||||| ||||||||| | |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  11995919 ctaatttgtttaccttgctgttaatgtcccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 11996018  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||||||    
T  11996019 agtttgatatttgagttgttgatttacattcaatattattatatcatgatggtttgcatactgcctatgttgttgtttgttaattaactaagatgcatga 11996118  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  11996119 gtcggtcta 11996127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 15754778 - 15754987
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaatt-aatgttgcttataatgatatataatcgtatatacattacatgactt 99  Q
    |||||||||||| |||| ||||||| ||| |||||||||| ||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  15754778 ctaagttgtttatcttgctgttaatattccagtaagactgatgcatatgaatttaatgttgcttataatgttatataattgtatatacattacatgactt 15754877  T
Q  100 aagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatg 199  Q
    | |||||||| |||||||| ||||||  |||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||| ||||||||||||||    
T  15754878 atgtttgatatttgagttgttgatttgcattcgatattattatatcatgatggtttgcatactacctatattgttatttgttatttaactaagctgcatg 15754977  T
Q  200 agtcggtcta 209  Q
    |||| |||||    
T  15754978 agtcagtcta 15754987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 16495570 - 16495423
Alignment:
Q  62 ttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  16495570 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 16495471  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16495470 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 16495423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 44014354 - 44014199
Alignment:
Q  53 taatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatgg 152  Q
    |||||||| || ||||| |||||||  |||||||||||| |||| ||| ||| |||| ||||| || ||||||  |||||||||| ||||||||| |||     
T  44014354 taatgttgtttttaatggtatataactgtatatacattatatgaattatgtt-gatatttgagatgttgatttgcattcgatattgttatatcatgatga 44014256  T
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44014255 tttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 44014199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 16219670 - 16219817
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  || || || ||||   ||  |||||||||| ||||||||| ||| |||||||||    
T  16219670 taatgttatataattgtatatacattacatgaattatgtttgatgtttaagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatac 16219769  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  16219770 tgcctatgttgttgtttgttatttaactaagctacatgagtcggtcta 16219817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 67911 - 67766
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||    
T  67911 taatgttatataattgtatatacattatatgaattatgtt-gata-ttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatac 67814  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  67813 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 67766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 18005813 - 18005667
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||| |||||    
T  18005813 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttccatac 18005715  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  18005714 tgcttatgttgctgtttgttatttaactaagctgcatgagtcggtcta 18005667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 811084 - 811231
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||  || |||  ||| ||  |||||||||| ||||||||| ||| |||||||||    
T  811084 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttaatgacttgcattcgatattgttatatcatgatgatttgcatac 811183  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  811184 tgcctatgttgctatttgttatttaactaagctgcatgagtcggtcta 811231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 47831975 - 47831828
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| |||||||  ||  || |||| ||| ||  |||||||||| ||||||||| ||| | |||||||    
T  47831975 taatgttatataattgtatatacattatatgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatatgcatac 47831876  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||    
T  47831875 tgtctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 47831828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 2280125 - 2280219
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||  ||| ||||||||||||||||  || |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  2280125 gttgttgatttgcatttgatattattatatcatgctgttttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtcta 2280219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 16056495 - 16056349
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  |||||   ||| ||||||  ||| |||||| |||||||||  || ||||||||     
T  16056495 taatgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgttgatttgcatttgatattgttatatcatgttg-tttgcataa 16056397  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    || |||||||| ||||||||||| ||||||| ||||| ||||||||||    
T  16056396 tgtctatgttgctgtttgttatttaactaaggtgcatcagtcggtcta 16056349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 22073083 - 22072934
Alignment:
Q  65 taatgatatataatcgtatatacattacatga-cttaagtttgataattga---gttgctgatttatattcgatattattatatcattatgg-tttgcat 159  Q
    ||||| |||||||| | |||||||||||||||  ||| |||||||  ||||   |||| ||| ||| ||| |||||| |||||||||  ||| |||||||    
T  22073083 taatgttatataattgcatatacattacatgagtttatgtttgatgtttgagatgttgttgacttacatttgatattgttatatcatgctggttttgcat 22072984  T
Q  160 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    | ||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  22072983 agtgcctatgttgttgtttgttatttaactaagctgcatgggtcagtcta 22072934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 16386292 - 16386348
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  16386292 tttgtatactgcctatgtcgttgtttgttatttaactaagctgcatgagtcggtcta 16386348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 12255837 - 12255892
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  12255837 tttgcatactgactatgttgttgtttgttatttaactaagctgcatgagtctgtct 12255892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 206
Target Start/End: Complemental strand, 12901511 - 12901347
Alignment:
Q  46 tatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattata 143  Q
    ||||| ||||||||| |  ||||| |||||| | ||||||||||||||||| ||| || ||||  | ||| ||||||| |||  ||| |||||| |||||    
T  12901511 tatgatttaatgttgttgttaatgttatatagttgtatatacattacatgaattatgtatgatgttgtgatgttgctgttttgcatttgatattgttata 12901412  T
Q  144 tcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    |||| |  |  |||| ||||||||||||||||||||||||  | |||||||||||||||||||||    
T  12901411 tcatgaattattttgtatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 12901347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 10063838 - 10063918
Alignment:
Q  129 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||| || |||||| | ||||||| |||||||||| |||||    
T  10063838 ttcgatattattatatcatgatgttgtgcataccgcctatgttgctgattgttaattaactaagttgcatgagtcagtcta 10063918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 13647401 - 13647346
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  13647401 tttgcatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 13647346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 19486766 - 19486842
Alignment:
Q  131 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || |  |||   ||||||||||||||||||||||    
T  19486766 cgatattattatatcatgatgttttgcatactgcctatgttgctgatcattaactaactaagctgcatgagtcggtc 19486842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 20220132 - 20220288
Alignment:
Q  55 atgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcatta--tgg 152  Q
    |||||| | ||||||  ||||||| |||||| |||||||||| |||  | ||||  ||||| || ||||||  ||| |||||| ||||||||| |  ||     
T  20220132 atgttgttaataatgtgatataattgtatatgcattacatgaattatatatgatgtttgagatgttgatttgcatttgatattgttatatcatgaactgt 20220231  T
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||   |||||||||||||||||||||||  | |||||||||| |||||||||||||    
T  20220232 tttatgtactgcctatgttgttgtttgtttattaactaagctgtatgagtcggtcta 20220288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 38227578 - 38227502
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||||| ||||||||||||||||||||||||    
T  38227578 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttatttaactaagctgcatgagtcggtcta 38227502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 3564409 - 3564464
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  3564409 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 3564464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 12698907 - 12698852
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  12698907 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 12698852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 1868044 - 1868095
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||| |||  | ||||||||||||||||||||||||    
T  1868044 atactgcctatgttgttgttagtttattaactaagctgcatgagtcggtcta 1868095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 48991280 - 48991206
Alignment:
Q  132 gatattattatatc--attatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcg 204  Q
    ||||||||||||||  | |||| |||  ||||||||||||||||||||||||  | |||||||||||||||||||    
T  48991280 gatattattatatctgaatatgttttatatactgcctatgttgttgtttgtttattaactaagctgcatgagtcg 48991206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 40443462 - 40443412
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| ||||||| ||||||||||| |||||||||||| |||||||||||    
T  40443462 tactgcgtatgttgctgtttgttatttaactaagctgcacgagtcggtcta 40443412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 15008548 - 15008597
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||| ||||||||||||||||||  | ||||||||||||||||||||||    
T  15008548 atactacctatgttgttgtttgtttattaactaagctgcatgagtcggtc 15008597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 18456436 - 18456512
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | |  |||||| ||||||||||||||||||||||||    
T  18456436 gatattattatgtcatgttgttttgtatactgcctatgttgctatc-gttatttaactaagctgcatgagtcggtcta 18456512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 27847881 - 27847930
Alignment:
Q  160 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||| ||||| ||||| ||||||||||||||| ||||||||    
T  27847881 actgcctatgttgctgtttattatttaactaagctgcatgaatcggtcta 27847930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 9177718 - 9177766
Alignment:
Q  161 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||| ||||| || |||||||||||||||||||||    
T  9177718 ctgcatatgttgttgtttattattgaattaagctgcatgagtcggtcta 9177766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 9509260 - 9509210
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||  |||| |||||| ||||||||||||||||||||||||    
T  9509260 atactgcctatgttactgtt-gttatttaactaagctgcatgagtcggtcta 9509210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 14044817 - 14044767
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| | ||||||  | ||||||||||||||||||||||||    
T  14044817 tactgcctatgttgctttttgtttattaactaagctgcatgagtcggtcta 14044767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 14354847 - 14354797
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| | ||||||  | ||||||||||||||||||||||||    
T  14354847 tactgcctatgttgctttttgtttattaactaagctgcatgagtcggtcta 14354797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 13831431 - 13831391
Alignment:
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  13831431 tgttgttgtt-gttatttaactaagctgcatgagtcggtcta 13831391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 456371 - 456339
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  456371 ttgttatttaactaagctgcatgagtcggtcta 456339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 3386383 - 3386351
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  3386383 ttgttatttaactaagctgcatgagtcggtcta 3386351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 10589115 - 10589060
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||| ||||||| |||| |||||| ||||||||||||||||||| ||||    
T  10589115 tttgtatactgcatatgttgctgtt-gttatttaactaagctgcatgagtcgatcta 10589060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 11393399 - 11393431
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  11393399 ttgttatttaactaagctgcatgagtcggtcta 11393431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 11972546 - 11972514
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  11972546 ttgttatttaactaagctgcatgagtcggtcta 11972514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 13869396 - 13869364
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  13869396 ttgttatttaactaagctgcatgagtcggtcta 13869364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 14949234 - 14949266
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  14949234 ttgttatttaactaagctgcatgagtcggtcta 14949266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 15144105 - 15144137
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  15144105 ttgttatttaactaagctgcatgagtcggtcta 15144137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 15376825 - 15376857
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  15376825 ttgttatttaactaagctgcatgagtcggtcta 15376857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 16213734 - 16213702
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  16213734 ttgttatttaactaagctgcatgagtcggtcta 16213702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 16232570 - 16232538
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  16232570 ttgttatttaactaagctgcatgagtcggtcta 16232538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 16410109 - 16410077
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  16410109 ttgttatttaactaagctgcatgagtcggtcta 16410077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 17062027 - 17062059
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  17062027 ttgttatttaactaagctgcatgagtcggtcta 17062059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 18430762 - 18430730
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  18430762 ttgttatttaactaagctgcatgagtcggtcta 18430730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 18640322 - 18640290
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  18640322 ttgttatttaactaagctgcatgagtcggtcta 18640290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 20110606 - 20110574
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  20110606 ttgttatttaactaagctgcatgagtcggtcta 20110574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 20385235 - 20385267
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  20385235 ttgttatttaactaagctgcatgagtcggtcta 20385267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 21189707 - 21189739
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  21189707 ttgttatttaactaagctgcatgagtcggtcta 21189739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 24275221 - 24275189
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  24275221 ttgttatttaactaagctgcatgagtcggtcta 24275189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 24702288 - 24702256
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  24702288 ttgttatttaactaagctgcatgagtcggtcta 24702256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 24704738 - 24704706
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  24704738 ttgttatttaactaagctgcatgagtcggtcta 24704706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 26212072 - 26212017
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||| || |||||||||||||    
T  26212072 tttgtatactgcctatgttgctgtt-gttatttaactaagttgtatgagtcggtcta 26212017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 32125541 - 32125509
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  32125541 ttgttatttaactaagctgcatgagtcggtcta 32125509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 41522967 - 41522935
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  41522967 ttgttatttaactaagctgcatgagtcggtcta 41522935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 41525429 - 41525397
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  41525429 ttgttatttaactaagctgcatgagtcggtcta 41525397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 48273465 - 48273410
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||| ||||| |||| |||||| ||||||||||||| ||||||||||    
T  48273465 tttgtatactgcctgtgttgctgtt-gttatttaactaagctgcataagtcggtcta 48273410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 169; Significance: 8e-91; HSPs: 4)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 11521 - 11313
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  11521 ctaagttgtttaccttggtgttaatgttcaagtaagactgatgcttatgaattaatgttgcttataatgttatataatagtatatacattacatgactta 11422  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  11421 agtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 11322  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  11321 gtcggtcta 11313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 2226 - 2018
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  2226 ctaagttgtttaccttgctgttaatgttccagtaagtctgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 2127  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  2126 agtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgtttgtgtttgttatttaactaagctgcatga 2027  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  2026 gtcggtcta 2018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 28490 - 28435
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  28490 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 28435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 4608 - 4573
Alignment:
Q  174 tgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||||||||||||||||||||||    
T  4608 tgtttgttatttaactaagctgcatgagtcggtcta 4573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 8e-91; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 5866166 - 5866374
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  5866166 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 5866265  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  5866266 agtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 5866365  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  5866366 gtcggtcta 5866374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 17141145 - 17140937
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  17141145 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 17141046  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||| |||| ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  17141045 agtttgataattgagttgatgatttacattcgatattattatgtcatgatggattgcatactgcctatgttgctgtttgttatttaactaagctgcatga 17140946  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  17140945 gtcggtcta 17140937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 21491224 - 21491016
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  21491224 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcctatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 21491125  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  21491124 agtttgataattgagttgttgatttacattcaatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 21491025  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  21491024 gtcggtcta 21491016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 33 - 209
Target Start/End: Complemental strand, 21249582 - 21249405
Alignment:
Q  33 taagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcg 132  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  21249582 taagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttacattcg 21249483  T
Q  133 atattattatatcattatggtttgcatactgcctatgttg-ttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| |||  ||||||||||| ||||||| |  ||| ||||| ||||||||||||||||||||||||    
T  21249482 atattattatatcatgatgaattgcatactgcttatgttgctatttttttatttaactaagctgcatgagtcggtcta 21249405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 33 - 209
Target Start/End: Complemental strand, 21255420 - 21255243
Alignment:
Q  33 taagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcg 132  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  21255420 taagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttacattcg 21255321  T
Q  133 atattattatatcattatggtttgcatactgcctatgttg-ttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| |||  ||||||||||| ||||||| |  ||| ||||| ||||||||||||||||||||||||    
T  21255320 atattattatatcatgatgaattgcatactgcttatgttgctatttttttatttaactaagctgcatgagtcggtcta 21255243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 26355589 - 26355798
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| ||| |||||| ||||| |||||||||| ||| |||||||| |||||| |||||||| |||||||| |||||||||||| |||   ||    
T  26355589 ctaagttgtttatctttttgttattgttctagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattaaatggaata 26355688  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcat 198  Q
     ||| |||   |||| || || |  ||  |||||||||| ||||||| | ||| ||||||||||||||||||||||||||||| || |||||||||||||    
T  26355689 tgtt-gatggctgagatgttgttgattgcattcgatattgttatatcgtgatgatttgcatactgcctatgttgttgtttgttgtttaactaagctgcat 26355787  T
Q  199 gagtcggtcta 209  Q
    |||||||||||    
T  26355788 gagtcggtcta 26355798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 21285765 - 21285618
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    |||||||||||||| |||||||||||||||||  || |||||||  |||||   ||| ||||||  ||| |||||| |||||||||  || |||||||||    
T  21285765 taatgatatataattgtatatacattacatgaactatgtttgatgtttgagatgttgttgatttgcatttgatattgttatatcatgttgttttgcatac 21285666  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  21285665 tgcctatgttgttgtttgttatttaacaaagctgcatgagtcggtcta 21285618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 38855205 - 38855351
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||    
T  38855205 taatgttatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatac 38855303  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  38855304 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 38855351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 6520535 - 6520389
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtt--tgataattgagttgctgatttatattcgatattattatatcattatggtttgcatact 162  Q
    ||||| |||||||| ||||||||||||||||| ||| |||  || | ||   |||| ||| ||  |||||||||| ||||||||| ||| ||||||||||    
T  6520535 taatgttatataattgtatatacattacatgaattatgttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatttgcatact 6520436  T
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  6520435 gcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 6520389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 23760798 - 23760944
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||| ||||| ||||||||| ||| ||| |||||    
T  23760798 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgaattcaatattgttatatcatgatgatttacatac 23760896  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  23760897 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 23760944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 17612132 - 17612210
Alignment:
Q  131 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||| |||||| | |||||||||||||||||| |||||    
T  17612132 cgatattattatatcatgatgttttgcatactgcctatgttgttgattgttaattaactaagctgcatgagtcagtcta 17612210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 21673819 - 21673725
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||  |||||||||| ||||||||| ||| |||||||| ||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  21673819 gttgttgatttgcattcgatattgttatatcatgatgatttgcataatgcctatgttgttgtttgttatttaactatgatgcatgagtcggtcta 21673725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 21396029 - 21396080
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21396029 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 21396080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 21790522 - 21790573
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21790522 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 21790573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 22626850 - 22626757
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||| |||| ||||||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  22626850 gttgttgatttgtatttgatattattatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 22626757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 983449 - 983506
Alignment:
Q  152 gtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  983449 gtttgcatactgcctatgttgctgattgttatttaactaagctgcatgagtcggtcta 983506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 13508105 - 13508185
Alignment:
Q  129 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||| ||| | |||||| ||||||||||| || |||||| | |||||||||||||||||| |||||    
T  13508105 ttcgatattattatatcatgatgttgtgcatattgcctatgttgctgattgttaattaactaagctgcatgagtcagtcta 13508185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 13597637 - 13597717
Alignment:
Q  129 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||| ||| ||||||| |||| ||||||| || |||||| | |||||||||||||||||| |||||    
T  13597637 ttcgatattattatatcatgatgttttgcattctgcttatgttgctgattgttaattaactaagctgcatgagtcagtcta 13597717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 21389499 - 21389550
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  21389499 atactacctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 21389550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 21778825 - 21778876
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  21778825 atactacctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 21778876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 16199687 - 16199744
Alignment:
Q  152 gtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||||    
T  16199687 gtttgaatactgtctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 16199744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 31971354 - 31971278
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  31971354 gatattattatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 31971278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 17267044 - 17267094
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  17267044 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtcta 17267094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 20498795 - 20498583
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| |||| |||||   ||||||||| ||  ||||| || |||||| ||||||||  ||||||| ||||||||||||| ||| |||    
T  20498795 ctaagttgtttatcttgatgttgatgtttcggtaagactgatgtatatgatttgatgttgtttataatgtgatataattgtatatacattacttgaatta 20498696  T
Q  101 agtttga-taattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgc 196  Q
      | ||| |  ||||| || ||||   ||  ||| |||||| |||||||||  |  ||| |||||||||||||||| ||||||||  | ||||||| |||    
T  20498695 tatatgaatgtttgagatgttgatgacttgcatttgatattgttatatcatgctattttacatactgcctatgttgctgtttgtttattaactaagttgc 20498596  T
Q  197 atgagtcggtcta 209  Q
    |||||||||||||    
T  20498595 atgagtcggtcta 20498583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 7372854 - 7372799
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  7372854 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 7372799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 18818454 - 18818509
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  18818454 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 18818509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 18879276 - 18879331
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  18879276 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 18879331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 21919045 - 21919100
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  21919045 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 21919100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 23406455 - 23406400
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  23406455 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 23406400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 28649094 - 28649144
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  28649094 atactgcctatgttgct-tttgttatttaactaagctgcatgagtcggtcta 28649144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 17439557 - 17439603
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcgg 205  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||    
T  17439557 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcgg 17439603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 24353091 - 24353041
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  24353091 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 24353041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 37116418 - 37116368
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  37116418 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 37116368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 45131047 - 45131096
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  45131047 tactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 45131096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 21923980 - 21924028
Alignment:
Q  160 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  21923980 actgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 21924028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 6759334 - 6759279
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||| ||||| |||| |||||| ||||||||||||||||||||||||    
T  6759334 tttgtatactgcctgtgttgctgtt-gttatttaactaagctgcatgagtcggtcta 6759279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 16092387 - 16092442
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||| ||||| |||| |||||| ||||||||||||||||||||||||    
T  16092387 tttgtatactgcctgtgttgctgtt-gttatttaactaagctgcatgagtcggtcta 16092442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 19154936 - 19154984
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    ||||||||||||||| ||||||||  | |||||||||||||||||||||    
T  19154936 atactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 19154984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 20536284 - 20536229
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||  |||| |||||| ||||||||||||||||||||||||    
T  20536284 tttgtatactgcctatgtttctgtt-gttatttaactaagctgcatgagtcggtcta 20536229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 41598238 - 41598206
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||||||||||||||||    
T  41598238 ttgttattcaactaagctgcatgagtcggtcta 41598206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 22525628 - 22525579
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||| |||||||||  ||||| ||||||||||||||||||||||||    
T  22525628 tactgcctaagttgttgttgtttatt-aactaagctgcatgagtcggtcta 22525579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 22875162 - 22875086
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||| ||||| || | | |||| ||||||||||||||||||||||||    
T  22875162 gatattattatgtcatgttgttttgtatactgcctgtgttgctgct-gctatttaactaagctgcatgagtcggtcta 22875086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 1484452 - 1484420
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  1484452 ttgttatttaactaagctgcatgagtcggtcta 1484420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 4542485 - 4542517
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  4542485 ttgttatttaactaagctgcatgagtcggtcta 4542517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 5853404 - 5853436
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  5853404 ttgttatttaactaagctgcatgagtcggtcta 5853436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 14409556 - 14409588
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  14409556 ttgttatttaactaagctgcatgagtcggtcta 14409588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 15070608 - 15070576
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  15070608 ttgttatttaactaagctgcatgagtcggtcta 15070576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 16413428 - 16413460
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  16413428 ttgttatttaactaagctgcatgagtcggtcta 16413460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 19896315 - 19896283
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  19896315 ttgttatttaactaagctgcatgagtcggtcta 19896283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 20046307 - 20046339
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  20046307 ttgttatttaactaagctgcatgagtcggtcta 20046339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 20403277 - 20403245
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  20403277 ttgttatttaactaagctgcatgagtcggtcta 20403245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 22001803 - 22001771
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  22001803 ttgttatttaactaagctgcatgagtcggtcta 22001771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 26219767 - 26219735
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  26219767 ttgttatttaactaagctgcatgagtcggtcta 26219735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 26225359 - 26225391
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  26225359 ttgttatttaactaagctgcatgagtcggtcta 26225391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 45290807 - 45290839
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  45290807 ttgttatttaactaagctgcatgagtcggtcta 45290839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 165; Significance: 2e-88; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 19660727 - 19660935
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  19660727 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 19660826  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  19660827 agtttgataattgagttgttgatttatattcgatatcattatatcaagatggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 19660926  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  19660927 gtcggtcta 19660935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 22959426 - 22959632
Alignment:
Q  3 aagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaag 102  Q
    |||||||||| |||||||||  ||||| |||||||||| ||| ||||||| ||||||| ||| |||| |||||||| ||||||||||||||||||||| |    
T  22959426 aagttgtttatcttgttgtttttgttccagtaagactgatgcatatgaatcaatgttggttaaaatgttatataattgtatatacattacatgacttatg 22959525  T
Q  103 tttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagt 202  Q
    ||||||| |||||||| ||||||  |||| ||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  22959526 tttgatatttgagttgttgatttgcattcaatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagt 22959625  T
Q  203 cggtcta 209  Q
    |||||||    
T  22959626 cggtcta 22959632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 21565774 - 21565563
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||||||||  ||||| |||||||||| ||| |||||||| |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  21565774 ctaagttgtttatcttgttgttgttgttctagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaatta 21565675  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| |||| ||||||||||||||| | ||||||||| ||||||||||||    
T  21565674 tgtttgatatttgaaatgttgatgacttgcattcgatattgttatatcatgatgatttggatactgcctatgttgctatttgttatttaactaagctgca 21565575  T
Q  198 tgagtcggtcta 209  Q
    ||||||||||||    
T  21565574 tgagtcggtcta 21565563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 19669129 - 19668919
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaat--taatgttgcttataatgatatataatcgtatatacattacatgact 98  Q
    |||||| ||||| |||||||||  ||||| |||||||||| ||| |||||||  | |||||| |||||||| |||||||| |||||||||||||| ||||    
T  19669129 ctaagtcgtttatcttgttgttgttgttccagtaagactgatgcatatgaatattgatgttgtttataatgttatataattgtatatacattacaggact 19669030  T
Q  99 taagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcat 198  Q
    || |||||||| |||||||| ||||||  |||||||||| ||||||||  ||| ||||||||||| |||||||||||||||||||| |||| |||||||     
T  19669029 tatgtttgatatttgagttgttgatttgcattcgatattgttatatcacgatgatttgcatactgtctatgttgttgtttgttatttaactgagctgcaa 19668930  T
Q  199 gagtcggtcta 209  Q
    |||||||||||    
T  19668929 gagtcggtcta 19668919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 21329450 - 21329597
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  |||||||||| |||||| || ||| |||||||||    
T  21329450 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgaattcgatattgttatattatgatgatttgcatac 21329549  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  21329550 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 21329597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 36314678 - 36314598
Alignment:
Q  129 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  36314678 ttcgatattattatatcatgatggtttgcatactacctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 36314598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 71 - 209
Target Start/End: Original strand, 26011994 - 26012135
Alignment:
Q  71 tatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgccta 167  Q
    |||||||| ||||||||||||||||| ||| |||||||  |||||   ||| ||||| | ||| |||||| |||||||||  || |||||||||||||||    
T  26011994 tatataattgtatatacattacatgaattatgtttgatgtttgagatgttgttgattcacatttgatattgttatatcatgttgctttgcatactgccta 26012093  T
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||| ||||||||  | ||||||||||||||||||||||||    
T  26012094 tgttgctgtttgtttattaactaagctgcatgagtcggtcta 26012135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 20026880 - 20027041
Alignment:
Q  52 ttaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta 149  Q
    ||||||||| | |||||| |||||| | ||||||||||||||||| ||| |||||||  | ||| |||| ||| ||  ||| |||||||||||||||| |    
T  20026880 ttaatgttgttgataatgctatatagttgtatatacattacatgaattatgtttgatgttgtgatgttgttgaattgcatttgatattattatatcatga 20026979  T
Q  150 --tggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
      || |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  20026980 actgttttggatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 20027041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 21502109 - 21502256
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  || || || ||||   ||  |||||||||| |||||||||  || ||| |||||    
T  21502109 taatgttatataattgtatatacattacatgaattatgtttgatgtttaagatgatgatgacttgcattcgatattgttatatcatgctgatttacatac 21502208  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  21502209 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 21502256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 22144147 - 22144070
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| |||||||||  || |||||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  22144147 gatattgttatatcatgttgttttgcatactacctatgttgatgtctgttatttaactaagctgcatgagtcggtcta 22144070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 24529296 - 24529241
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  24529296 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 24529241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 25421608 - 25421553
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  25421608 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 25421553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 8286888 - 8286943
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  8286888 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 8286943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 21729109 - 21729164
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  21729109 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 21729164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 21808434 - 21808489
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  21808434 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 21808489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 21997579 - 21997634
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  21997579 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 21997634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 40725952 - 40725876
Alignment:
Q  131 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| || |  |||   ||||||||||||||||||||||    
T  40725952 cgatattattatatcatgatgctttgcatactgcctacgttgctgatcattaactaactaagctgcatgagtcggtc 40725876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 22178270 - 22178321
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||||  | ||||||| ||||||||||||||||    
T  22178270 atactgcctatgttgttgtttgtttattaactaagttgcatgagtcggtcta 22178321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 36314719 - 36314672
Alignment:
Q  62 ttataatgatatataatcgtatatacattacatgacttaagtttgata 109  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  36314719 ttataatgttatataattgtatatacattacatgacttaagttcgata 36314672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 37723975 - 37723924
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||| |||||    
T  37723975 atactgcctatgttgctgtctgttatttaactaagctgcatgagtcagtcta 37723924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 22412281 - 22412205
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||||||||||| |  |||||| ||||||||| ||||||||||||||    
T  22412281 gatattattatgtcatgctgttttgtatactgcctatgttgttatc-gttatttaactaagctacatgagtcggtcta 22412205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 1096543 - 1096488
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| ||| ||||| |||| |||||| ||||||||||||||||||||||||    
T  1096543 tttgcatactacctgtgttgctgtt-gttatttaactaagctgcatgagtcggtcta 1096488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 23390541 - 23390596
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||| |||||||| |||| |||||| ||||||||||||||||||||||||    
T  23390541 tttgtatactgtctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 23390596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 25431470 - 25431415
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||| ||||||||||||||||    
T  25431470 tttgtatactgcctatgttgctgtt-gttatttaactaagatgcatgagtcggtcta 25431415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 21293020 - 21293069
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| |||| |||||| ||||||||||||||| ||||||||    
T  21293020 tactgcctatgttgctgtt-gttatttaactaagctgcatgaatcggtcta 21293069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 20909063 - 20909030
Alignment:
Q  176 tttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||| ||||||||||||||||||||||||    
T  20909063 tttgttatttaactaagctgcatgagtcggtcta 20909030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 24493666 - 24493590
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||| | ||| ||||||||||||||||||||    
T  24493666 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttacttaaccaagctgcatgagtcggtcta 24493590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 26732884 - 26732932
Alignment:
Q  160 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  26732884 actgcctatgttgctgttgtttatt-aactaagctgcatgagtcggtcta 26732932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 264880 - 264912
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  264880 ttgttatttaactaagctgcatgagtcggtcta 264912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 2154726 - 2154758
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  2154726 ttgttatttaactaagctgcatgagtcggtcta 2154758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 10733052 - 10733084
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  10733052 ttgttatttaactaagctgcatgagtcggtcta 10733084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 11581311 - 11581343
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  11581311 ttgttatttaactaagctgcatgagtcggtcta 11581343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 13025387 - 13025332
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| | || |||||| ||||| ||||||||||||||||||    
T  13025387 tttgtatactgcctatgttgctatt-gttatttaactatgctgcatgagtcggtcta 13025332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 13095571 - 13095516
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| | || |||||| ||||| ||||||||||||||||||    
T  13095571 tttgtatactgcctatgttgctatt-gttatttaactatgctgcatgagtcggtcta 13095516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 20902121 - 20902153
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  20902121 ttgttatttaactaagctgcatgagtcggtcta 20902153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 20918060 - 20918092
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  20918060 ttgttatttaactaagctgcatgagtcggtcta 20918092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 22075095 - 22075040
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||| ||||||||| |||| |||||| |||||||||| |||||||||||||    
T  22075095 tttgtatacttcctatgttgctgtt-gttatttaactaagctgaatgagtcggtcta 22075040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 23064561 - 23064529
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  23064561 ttgttatttaactaagctgcatgagtcggtcta 23064529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 29329984 - 29329952
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  29329984 ttgttatttaactaagctgcatgagtcggtcta 29329952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 36154892 - 36154924
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  36154892 ttgttatttaactaagctgcatgagtcggtcta 36154924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 38619484 - 38619452
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  38619484 ttgttatttaactaagctgcatgagtcggtcta 38619452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 39245186 - 39245154
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  39245186 ttgttatttaactaagctgcatgagtcggtcta 39245154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 39363434 - 39363402
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  39363434 ttgttatttaactaagctgcatgagtcggtcta 39363402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 2e-88; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 23071849 - 23072045
Alignment:
Q  9 tttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgat 108  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  23071849 tttaccttgttgctaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgat 23071948  T
Q  109 aattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcgg 205  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  23071949 aattgagttgctgatttatattcgatattattatatcatgatggtttgcatactgcctatgttgttgttcgttatttaactaagctgcatgagtcgg 23072045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 28406144 - 28405997
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggttt-gcata 160  Q
    ||||| |||||||| |||||||||||  |||| ||||||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||| |||||    
T  28406144 taatggtatataattgtatatacattttatgaattaagtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgattttgcata 28406046  T
Q  161 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  28406045 ctgcctatgttgctgtttgttatttaactaagttgcatgagtcggtcta 28405997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 7679746 - 7679606
Alignment:
Q  71 tatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactgccta 167  Q
    ||||||||  |||||||||||||||| ||| |||||||  ||  || |||| ||| ||| ||| |||||| ||||||||| ||| |||||||||||||||    
T  7679746 tatataattatatatacattacatgaattatgtttgatgtttatgatgttgatgacttacatt-gatattgttatatcatgatgatttgcatactgccta 7679648  T
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||| ||||||||||| |||||||||||||||||| |||||    
T  7679647 tgttgctgtttgttatttaactaagctgcatgagtcagtcta 7679606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 25175965 - 25175871
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||| || |||||    
T  25175965 gttgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgaatctgtcta 25175871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 19671931 - 19671851
Alignment:
Q  129 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| || |||||| | |||||||||||||||||| |||||    
T  19671931 ttcgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagctgcatgagtcagtcta 19671851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 22134226 - 22134306
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| |||||| || ||| |||||||||||||||||||| || ||| |||| ||||||||||||||||||||||||    
T  22134226 attcgatattgttatattatgatgatttgcatactgcctatgttgctg-ttgatatttaactaagctgcatgagtcggtcta 22134306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 298859 - 298915
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  298859 tttgtatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 298915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 18786854 - 18787003
Alignment:
Q  64 ataatgatatataatcgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcat 159  Q
    |||||| |||||| | ||||||||||||||||| ||| |||||||  | ||| |||| ||| ||  ||| || ||| ||||||||| |  ||||||||||    
T  18786854 ataatgttatatagttgtatatacattacatgaattatgtttgatgttgtgacgttgttgaattgcatttgagattgttatatcatgaactggtttgcat 18786953  T
Q  160 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||| ||||||||  || |||||||| ||||||||||||||||||||||||    
T  18786954 actacctatgttactgattgttatttaactaagctgcatgagtcggtcta 18787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 38138 - 38214
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  38138 gatattattatgtcatgctgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 38214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 23708642 - 23708719
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| |||||||||  || |||||||||||||||||||| | | ||||||| ||||||||||| ||||||||||||    
T  23708642 gatattgttatatcatgttgttttgcatactgcctatgttgctatctgttatttaactaagctgcttgagtcggtcta 23708719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 22105485 - 22105430
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  22105485 tttgcatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 22105430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 20309180 - 20309129
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  20309180 atactgcctatgttgctatttgttatttaactaagctgcatgagtcggtcta 20309129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 7756 - 7833
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| |||||||||  || |||||||||||||||||||| ||||||||  | ||||||||||||||| || |||||    
T  7756 gatattgttatatcatgttgttttgcatactgcctatgttgctgtttgtttattaactaagctgcatgattcagtcta 7833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 23103439 - 23103495
Alignment:
Q  152 gtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  23103439 gtttgtatactgcctatgttgctgttt-ttatttaactaagctgcatgagtcggtcta 23103495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 23060589 - 23060534
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  23060589 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 23060534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 23076518 - 23076463
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  23076518 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 23076463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 23285941 - 23285886
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  23285941 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 23285886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 22413187 - 22413238
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||||  | ||||||| ||||||||||||||||    
T  22413187 atactgcctatgttgttgtttgtttattaactaagttgcatgagtcggtcta 22413238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 23207349 - 23207298
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  23207349 atactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 23207298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 23654409 - 23654486
Alignment:
Q  132 gatattattatatcattatgg-tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| |||| |||  |||| || ||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  23654409 gatattattatgtcatgatgtatttgtatgctgcctatgctgttgtt-gttatttaactaagctgcatgagtcggtcta 23654486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 25108958 - 25108908
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||||||  | ||||||||| ||||||||||||||    
T  25108958 tactgcctatgttgttgtttgtttattaactaagctacatgagtcggtcta 25108908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 22731286 - 22731334
Alignment:
Q  160 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  22731286 actgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 22731334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 23791344 - 23791294
Alignment:
Q  159 tactgcctatgttgttgtttg-ttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  23791344 tactgcctatgttgttgtttgcttatt-aactaagctacatgagtcggtcta 23791294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 20520243 - 20520293
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| ||||||| ||||||||  | ||||||||||||||||||||||||    
T  20520243 tactgcatatgttgctgtttgtttattaactaagctgcatgagtcggtcta 20520293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 23287433 - 23287384
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  23287433 tactgcctatgttgctgttgtttatt-aactaagctgcatgagtcggtcta 23287384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 26392451 - 26392403
Alignment:
Q  160 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  26392451 actgcctatgttgctgttgtttatt-aactaagctgcatgagtcggtcta 26392403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 32215025 - 32215065
Alignment:
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  32215025 tgttgttgtt-gttatttaactaagctgcatgagtcggtcta 32215065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 45029958 - 45029998
Alignment:
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  45029958 tgttgttgtt-gttatttaactaagctgcatgagtcggtcta 45029998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 571447 - 571415
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  571447 ttgttatttaactaagctgcatgagtcggtcta 571415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 6726045 - 6726013
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  6726045 ttgttatttaactaagctgcatgagtcggtcta 6726013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 8946733 - 8946678
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| | || |||||  ||||||||||||||||||||||||    
T  8946733 tttgtatactgcctatgttgctatt-gttatctaactaagctgcatgagtcggtcta 8946678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 18808993 - 18808961
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  18808993 ttgttatttaactaagctgcatgagtcggtcta 18808961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 21155172 - 21155204
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  21155172 ttgttatttaactaagctgcatgagtcggtcta 21155204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 22337168 - 22337136
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  22337168 ttgttatttaactaagctgcatgagtcggtcta 22337136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 22738247 - 22738279
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  22738247 ttgttatttaactaagctgcatgagtcggtcta 22738279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 23040257 - 23040289
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  23040257 ttgttatttaactaagctgcatgagtcggtcta 23040289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 23130912 - 23130880
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  23130912 ttgttatttaactaagctgcatgagtcggtcta 23130880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 23133379 - 23133347
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  23133379 ttgttatttaactaagctgcatgagtcggtcta 23133347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 23135640 - 23135608
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  23135640 ttgttatttaactaagctgcatgagtcggtcta 23135608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 23709644 - 23709676
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  23709644 ttgttatttaactaagctgcatgagtcggtcta 23709676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 23712125 - 23712157
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  23712125 ttgttatttaactaagctgcatgagtcggtcta 23712157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 24367824 - 24367792
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  24367824 ttgttatttaactaagctgcatgagtcggtcta 24367792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 24643062 - 24643094
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  24643062 ttgttatttaactaagctgcatgagtcggtcta 24643094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 26505429 - 26505397
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  26505429 ttgttatttaactaagctgcatgagtcggtcta 26505397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 26507907 - 26507875
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  26507907 ttgttatttaactaagctgcatgagtcggtcta 26507875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 28577149 - 28577117
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  28577149 ttgttatttaactaagctgcatgagtcggtcta 28577117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 32451981 - 32452029
Alignment:
Q  161 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||| |||||| | || ||| ||||||||||||||||||||    
T  32451981 ctgcctatgttgctgtttgatgtttaaccaagctgcatgagtcggtcta 32452029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 34402634 - 34402666
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  34402634 ttgttatttaactaagctgcatgagtcggtcta 34402666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 38967424 - 38967392
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  38967424 ttgttatttaactaagctgcatgagtcggtcta 38967392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 39682363 - 39682331
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  39682363 ttgttatttaactaagctgcatgagtcggtcta 39682331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 43137349 - 43137317
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  43137349 ttgttatttaactaagctgcatgagtcggtcta 43137317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 20918833 - 20918625
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||| |||||||||||||||||||||| |||||||||  |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||    
T  20918833 ctaagtcgtttaccttgttgttaatgttccagtaagactcatgcttatgaattgatgttgcttataatgttatataattgtatatacattacatgactta 20918734  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  20918733 agtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgcagtttgttatttaactaagctgcatga 20918634  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  20918633 gtcggtcta 20918625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 14295504 - 14295651
Alignment:
Q  62 ttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  14295504 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 14295603  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    | ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  14295604 tacctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 14295651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 31 - 209
Target Start/End: Complemental strand, 20248478 - 20248300
Alignment:
Q  31 agtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatatt 130  Q
    |||||||||| ||| |||||||  |||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| || ||||| ||||||  |||    
T  20248478 agtaagactgatgcatatgaatccatgttgtttataatgatatataattgtatatacattacatgacttatgtttgatatttaagttgttgatttgcatt 20248379  T
Q  131 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  20248378 cgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttttttaactaagttgcatgagtcggtcta 20248300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 33681239 - 33681028
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||||||||  ||||| |||||||||| ||| |||||||| |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  33681239 ctaagttgtttatcttgttgttgttgttctagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaatta 33681140  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||   ||||  || ||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||| ||||    
T  33681139 tgtttgatatttgagatgttgacgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagttgca 33681040  T
Q  198 tgagtcggtcta 209  Q
    ||||||||||||    
T  33681039 tgagtcggtcta 33681028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 22130843 - 22130975
Alignment:
Q  45 ttatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatat 144  Q
    |||||| || ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  22130843 ttatgatttgatgttgcttataatgttatataattgtatatgcattacatgacttaagtttgataattgagttgttgatttacattcgatattattatat 22130942  T
Q  145 cattatggtttgcatactgcctatgttgttgtt 177  Q
    ||| |||||||| ||||||||||||||| ||||    
T  22130943 catgatggtttggatactgcctatgttgctgtt 22130975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 52927871 - 52928070
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| | ||  ||||| |||||||||| ||| |||||||| |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  52927871 ctaagttgtttatcttgctattgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaatta 52927970  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     |||||||| ||||| ||         |||||||||| ||||||||| ||| ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  52927971 tgtttgatatttgagatg---------attcgatattgttatatcatgatgatttgcatactgtctatgttgttgtttgttatttaactaagctgcatga 52928061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 51130732 - 51130632
Alignment:
Q  62 ttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  51130732 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 51130633  T
Q  162 t 162  Q
    |    
T  51130632 t 51130632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 22921823 - 22921969
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||  ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||    
T  22921823 taatgttatataattgtatatacattatatgaattttgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatac 22921921  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22921922 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 22921969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 22237814 - 22237648
Alignment:
Q  46 tatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattat 142  Q
    |||||||| |||||| || ||| | |||||||| ||||||||||||||||| ||| |||||||| ||||| || ||||   ||  |||||||||| ||||    
T  22237814 tatgaattgatgttgtttctaaagttatataattgtatatacattacatgaattatgtttgatatttgagatgttgatgacttgcattcgatattgttat 22237715  T
Q  143 atcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||| ||| |||||||| ||||||||| | ||||||||||| ||||||||| ||||||||||||||    
T  22237714 atcatgatgatttgcataatgcctatgtcgctgtttgttatttaactaagcttcatgagtcggtcta 22237648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 21754267 - 21754066
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||| | ||||| |||||||||| ||| |||||||| |||||| |||||||| |        |||||||||||| |||  |||    
T  21754267 ctaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgaattgatgttgtttataatgtt--------gtatatacattaaatggatta 21754176  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcat 198  Q
     ||| |||||||||| || || |  ||  ||| |||||| ||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  21754175 tgtt-gataattgagatgttgttgattgcatttgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcat 21754077  T
Q  199 gagtcggtcta 209  Q
    |||||||||||    
T  21754076 gagtcggtcta 21754066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 209
Target Start/End: Complemental strand, 16758754 - 16758670
Alignment:
Q  127 tattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||| ||||||||| |  ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  16758754 tatttgatattgttatatcatgaactggtttgcatactgcctatgttgctgtttgttatttaactaagttgcatgagtcggtcta 16758670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 111 - 209
Target Start/End: Original strand, 35261080 - 35261178
Alignment:
Q  111 ttgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||| || ||||||  ||| |||||| |||||||||  || |||||||||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  35261080 ttgagatgttgatttgcatttgatattgttatatcatgctgttttgcatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 35261178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 21861593 - 21861670
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| |||||||||  || |||||||||||||||||||| ||||||||  | | ||||||||||||||||||||||    
T  21861593 gatattgttatatcatgctgttttgcatactgcctatgttgctgtttgtttattagctaagctgcatgagtcggtcta 21861670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 45574932 - 45574987
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  45574932 tttgcatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 45574987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 21896188 - 21896356
Alignment:
Q  45 ttatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttga-taattgagttgctgat---ttatattcgatattatt 140  Q
    |||||| || |||||| ||||||||  ||||||| ||||||||||||||||| |||  | ||| |  ||||| || ||||   ||  ||| |||||| ||    
T  21896188 ttatgatttgatgttgtttataatgtgatataattgtatatacattacatgaattatatatgaatgtttgagatgttgatgacttgcatttgatattgtt 21896287  T
Q  141 atatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||  || |||| ||||||||||||||| ||||||||  | ||||||| ||||||||||||||||    
T  21896288 atatcatgctgttttgtatactgcctatgttgctgtttgtttattaactaagttgcatgagtcggtcta 21896356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 38801433 - 38801483
Alignment:
Q  154 ttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcg 204  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||||||    
T  38801433 ttgcacactgcctatgttgctgtttgttatttaactaagctgcatgagtcg 38801483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 34509856 - 34509801
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  34509856 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 34509801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 50210258 - 50210313
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  50210258 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 50210313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 20847205 - 20847254
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  20847205 tactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 20847254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 26065009 - 26064959
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| ||||||    
T  26065009 tactgcctatgttgctgtttgtttatcaactaagctgcatgagttggtcta 26064959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 50614167 - 50614217
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  50614167 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 50614217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 50621995 - 50622045
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  50621995 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 50622045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 16368338 - 16368386
Alignment:
Q  161 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  16368338 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 16368386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 20454606 - 20454653
Alignment:
Q  161 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  20454606 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 20454653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 21026756 - 21026701
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||| ||| |||| |||||| ||||||||||||||||||||||||    
T  21026756 tttgtatactgcctatattgctgtt-gttatttaactaagctgcatgagtcggtcta 21026701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 27250774 - 27250829
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| | || |||||| ||||||||||||||||||||||||    
T  27250774 tttgtatactgcctatgttgctatt-gttatttaactaagctgcatgagtcggtcta 27250829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 21707225 - 21707185
Alignment:
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  21707225 tgttgttgtt-gttatttaactaagctgcatgagtcggtcta 21707185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 21711767 - 21711727
Alignment:
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  21711767 tgttgttgtt-gttatttaactaagctgcatgagtcggtcta 21711727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 22123171 - 22123212
Alignment:
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||| |||||| |||| ||||||||||||||||||||||||    
T  22123171 tgttgctgtttgctatttaactaagctgcatgagtcggtcta 22123212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 13212974 - 13213006
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  13212974 ttgttatttaactaagctgcatgagtcggtcta 13213006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 13988916 - 13988884
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  13988916 ttgttatttaactaagctgcatgagtcggtcta 13988884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 21161817 - 21161742
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcg 204  Q
    |||||||||| ||||||||  ||| |||||||||||  | ||||| |||||||| || ||||||| |||||||||||    
T  21161817 attcgatattgttatatcacgatgatttgcatactgttt-tgttgctgtttgttgtttaactaagttgcatgagtcg 21161742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 21342146 - 21342114
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  21342146 ttgttatttaactaagctgcatgagtcggtcta 21342114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 21347011 - 21346979
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  21347011 ttgttatttaactaagctgcatgagtcggtcta 21346979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 21840817 - 21840785
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  21840817 ttgttatttaactaagctgcatgagtcggtcta 21840785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 21923403 - 21923435
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  21923403 ttgttatttaactaagctgcatgagtcggtcta 21923435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 23593847 - 23593879
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  23593847 ttgttatttaactaagctgcatgagtcggtcta 23593879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 29298187 - 29298155
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  29298187 ttgttatttaactaagctgcatgagtcggtcta 29298155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 29776738 - 29776706
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  29776738 ttgttatttaactaagctgcatgagtcggtcta 29776706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 31612363 - 31612331
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  31612363 ttgttatttaactaagctgcatgagtcggtcta 31612331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 15890 - 15682
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| |||||||| || |||||||||| | |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  15890 ctaagttgtttaccttgctgttaatgatccagtaagactgattcttatgaaataatgttgcttataatgttatataattgtatatacattacatgactta 15791  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||||||||| ||    
T  15790 agtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgtatactgcctatgttgctgtttgttatttaactaagctgcacga 15691  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  15690 gtcggtcta 15682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 34352 - 34144
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||| ||||| |||||||    
T  34352 ctaagttgtttaccttgctgttaattttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatatattacttgactta 34253  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  34252 agtttgataattgagttgttgatttacattcgatattattatatcatgatgggttgtatactgcctatgttgttgtttgttatttaactaagctgtatga 34153  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  34152 gtcggtcta 34144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 7e-79; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 28496363 - 28496571
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  28496363 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcatatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 28496462  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     |||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  28496463 tgtttgatatttgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctaattgttatttaactaagctgcatga 28496562  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  28496563 gtcggtcta 28496571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29808774 - 29808982
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  29808774 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcatatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 29808873  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     |||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  29808874 tgtttgatatttgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctaattgttatttaactaagctgcatga 29808973  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  29808974 gtcggtcta 29808982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 1561533 - 1561324
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaatt-aatgttgcttataatgatatataatcgtatatacattacatgactt 99  Q
    |||||||||||| |||| ||||||| ||| |||||||||| ||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  1561533 ctaagttgtttatcttgctgttaatattccagtaagactgatgcatatgaatttaatgttgcttataatgttatataattgtatatacattacatgactt 1561434  T
Q  100 aagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatg 199  Q
    | |||||||| |||||||| ||||||  |||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||| ||||||||||||||    
T  1561433 atgtttgatatttgagttgttgatttgcattcgatattattatatcatgatggtttgcatactacctatattgttatttgttatttaactaagctgcatg 1561334  T
Q  200 agtcggtcta 209  Q
    |||| |||||    
T  1561333 agtcagtcta 1561324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 19652425 - 19652216
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||| ||||| |||||||||| ||| |||||||| |||||| |||||||| |||||||| |||||||| ||| |||  |||    
T  19652425 ctaagttgtttatcttgctgttattgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatactttaaatggatta 19652326  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcat 198  Q
     ||| |||  ||||| || || |  ||  |||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| || |||||||||||||    
T  19652325 tgtt-gatgtttgagatgttgttgattgcattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttgtttaactaagctgcat 19652227  T
Q  199 gagtcggtcta 209  Q
    |||||||||||    
T  19652226 gagtcggtcta 19652216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 27333238 - 27333318
Alignment:
Q  129 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  27333238 ttcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 27333318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 27393978 - 27394058
Alignment:
Q  129 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  27393978 ttcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 27394058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 23019574 - 23019427
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  |||||   ||| ||| ||  ||| |||||| |||||||||  || |||||||||    
T  23019574 taatgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgttgacttgcatttgatattgttatatcatgttgttttgcatac 23019475  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||| ||||||| ||||||||  | ||||||||||||| ||||||||||    
T  23019474 tgcttatgttgctgtttgtttattaactaagctgcataagtcggtcta 23019427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 9098466 - 9098614
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcata 160  Q
    ||||| ||||||||  |||||||||||||||| ||| |||||||  | ||| |||| |||  |  ||| |||||| ||||||||| |  || ||||||||    
T  9098466 taatgttatataattatatatacattacatgaattatgtttgatgttgtgaagttgttgaaatgcatttgatattgttatatcatgaattgttttgcata 9098565  T
Q  161 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  9098566 ctgcctttgttgctgtttgttatttaactaagctgcatgagtcggtcta 9098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 19668604 - 19668392
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||  ||||  |||||| ||| ||  |||||  || ||||| | |||||| |||||| | ||||||||||||||||| |||    
T  19668604 ctaagttgtttatcttgctgttgttgtttcagtaagtctgatgtatatgatgtagtgttgttgataatgttatatagttgtatatacattacatgaatta 19668505  T
Q  101 agtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaagctgc 196  Q
     || ||||  | ||| |||| ||||||  ||| |||||| ||||||||| |  || ||||||||||  |||||||| ||||||||| | |||||||||||    
T  19668504 cgtatgatgttgtgatgttgttgatttgcatttgatattgttatatcatgaactgttttgcatactatctatgttgctgtttgttaattaactaagctgc 19668405  T
Q  197 atgagtcggtcta 209  Q
    |||||||||||||    
T  19668404 atgagtcggtcta 19668392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 25644397 - 25644341
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  25644397 tttgcatactgcctatgttgctgtctgttatttaactaagctgcatgagtcggtcta 25644341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 4185840 - 4185919
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||| ||| |||| || ||||| ||||||||||||||||    
T  4185840 attcgatattgttatatcatgatgagttgcatactgcctatgttgctgtctgttgtttaactatgctgcatgagtcggtc 4185919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 20109236 - 20109159
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| |||||| ||  || |||||||||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  20109236 gatattgttatattatgttgttttgcatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 20109159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 22831571 - 22831524
Alignment:
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  22831571 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 22831524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 35245658 - 35245607
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  35245658 atactgcctatgttggtgtttgttaattaactaagctgcatgagtcggtcta 35245607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 11185568 - 11185526
Alignment:
Q  167 atgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  11185568 atgttgttgtttgttatttaactaagctgcatgagtcggtcta 11185526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 23076801 - 23076751
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  23076801 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtcta 23076751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 35008219 - 35008169
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  35008219 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtcta 35008169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 16920679 - 16920728
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    |||||||||||| || ||||||||||| ||||||||||||||||||||||    
T  16920679 atactgcctatgctgctgtttgttatttaactaagctgcatgagtcggtc 16920728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 19303564 - 19303640
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||| ||| |||||||||| |||||| ||||||||||||||||||||||||    
T  19303564 gatattattatgtcatgttgttttgtatacttcctgtgttgttgtt-gttatttaactaagctgcatgagtcggtcta 19303640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 20076797 - 20076721
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || ||||  |||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  20076797 gatattattatgtcatgctgttttgtttactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 20076721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 8227533 - 8227609
Alignment:
Q  131 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| || |  |||   ||||||||||||||||||||||    
T  8227533 cgatattattatatcatgatgttttgcatactgcctacgttgctgatcattaactaactaagctgcatgagtcggtc 8227609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 16496320 - 16496265
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  16496320 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 16496265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 20638328 - 20638383
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  20638328 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagttggtcta 20638383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 29060616 - 29060561
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  29060616 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 29060561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 4186469 - 4186390
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    |||||||||| ||||||||| |||  |||||||||| |||||||| ||  |||| || ||||| ||||||||||||||||    
T  4186469 attcgatattgttatatcatgatgagttgcatactgtctatgttgctgcctgttgtttaactatgctgcatgagtcggtc 4186390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 17287819 - 17287896
Alignment:
Q  132 gatattattatatcattatg-gtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || ||||| ||||| ||||||||| |||| |||||| ||||||||||||||||||||||||    
T  17287819 gatattattatgtcatgctgtgtttgtatactacctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 17287896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 22080757 - 22080800
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgtt 171  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||    
T  22080757 attcgatattgttatatcatgatgttttgcatactgcctatgtt 22080800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 33443118 - 33443068
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  33443118 atactgcctatgttgctgttgtttatt-aactaagctgcatgagtcggtcta 33443068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 2291292 - 2291324
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  2291292 ttgttatttaactaagctgcatgagtcggtcta 2291324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 3852129 - 3852161
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  3852129 ttgttattaaactaagctgcatgagtcggtcta 3852161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 4668230 - 4668274
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttg 172  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||    
T  4668230 attcgatattgttatatcatgatgagttgcatactgcctatgttg 4668274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 4675077 - 4675121
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttg 172  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||    
T  4675077 attcgatattgttatatcatgatgagttgcatactgcctatgttg 4675121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 8055079 - 8055047
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  8055079 ttgttatttaactaagctgcatgagtcggtcta 8055047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 12742367 - 12742335
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  12742367 ttgttatttaactaagctgcatgagtcggtcta 12742335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 18334704 - 18334736
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  18334704 ttgttatttaactaagctgcatgagtcggtcta 18334736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 18456769 - 18456737
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  18456769 ttgttatttaactaagctgcatgagtcggtcta 18456737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 18461929 - 18461897
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  18461929 ttgttatttaactaagctgcatgagtcggtcta 18461897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 18821912 - 18821944
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  18821912 ttgttatttaactaagctgcatgagtcggtcta 18821944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 19005096 - 19005064
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  19005096 ttgttatttaactaagctgcatgagtcggtcta 19005064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 19859031 - 19859063
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  19859031 ttgttatttaactaagctgcatgagtcggtcta 19859063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 20361013 - 20361060
Alignment:
Q  161 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||| |||| |||||| ||||||||||||||||||| ||||    
T  20361013 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcgatcta 20361060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 22780272 - 22780327
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||| |||||||||| ||||| |||||| |||||||||||||||||| |||||    
T  22780272 tttgtatattgcctatgtttttgtt-gttatttaactaagctgcatgagtcagtcta 22780327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 22782277 - 22782245
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  22782277 ttgttatttaactaagctgcatgagtcggtcta 22782245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 24422597 - 24422565
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  24422597 ttgttatttaactaagctgcatgagtcggtcta 24422565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 25656679 - 25656647
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  25656679 ttgttatttaactaagctgcatgagtcggtcta 25656647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 25714470 - 25714438
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  25714470 ttgttatttaactaagctgcatgagtcggtcta 25714438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 25754859 - 25754827
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  25754859 ttgttatttaactaagctgcatgagtcggtcta 25754827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 26924752 - 26924784
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  26924752 ttgttatttaactaagctgcatgagtcggtcta 26924784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 30676822 - 30676854
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  30676822 ttgttatttaactaagctgcatgagtcggtcta 30676854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 33861844 - 33861812
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  33861844 ttgttatttaactaagctgcatgagtcggtcta 33861812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 33864328 - 33864296
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  33864328 ttgttatttaactaagctgcatgagtcggtcta 33864296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 7e-76; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 16596877 - 16596686
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  16596877 ctaagttgtttaccttgctgttaatgttcaagtaagactgatgcttataaattaatgttgcttataatgttatataattgtatatacattacatgactta 16596778  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaag 192  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||| |||||||    
T  16596777 agtttgataattgagttgatgatttacattcgatattattatatcatgatggtttgcatactacctatgttgctgtttgttatttaactaag 16596686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 15552045 - 15551838
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||| ||| || ||||||||| | |||||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  15552045 ctaagttgtt-accctgctgttaatgtcccagtaagactgatgcttatgaatcaatgttgcttataatgttatataattgtatatacattacatgactta 15551947  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| |||||||  ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  15551946 agtttgataattgagttgttgatttaccttcgatattattatatcatgatggattgcatactgcctatgttgctgtttgttatttaactaagctgcatga 15551847  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  15551846 gtcggtcta 15551838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 12774229 - 12774028
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||  ||||| |||||||||| ||| |||||||| |||||| |||||||| |        |||||||||||| |||  |||    
T  12774229 ctaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgtt--------gtatatacattaaatggatta 12774138  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcat 198  Q
     ||| |||||||||| || || |  || ||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  12774137 tgtt-gataattgagatgttgttgattgtattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcat 12774039  T
Q  199 gagtcggtcta 209  Q
    |||||||||||    
T  12774038 gagtcggtcta 12774028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 39706307 - 39706388
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39706307 attcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 39706388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 13739 - 13951
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||  |||| |||||| |||||||||| || |||||| || |||||| ||||||||  ||||||| ||||||||||||| ||| |||    
T  13739 ctaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgatgttgtttataatgtgatataattgtatatacattacttgaatta 13838  T
Q  101 agtttga-taattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgc 196  Q
      | ||| || ||||| || ||||   ||  ||| |||||| |||||||||  || |||||||||||||||||||| ||||||||  | |||||||||||    
T  13839 tatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgttgttttgcatactgcctatgttgctgtttgtttattaactaagctgc 13938  T
Q  197 atgagtcggtcta 209  Q
    |||||||||||||    
T  13939 atgagtcggtcta 13951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 43198441 - 43198655
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| ||||||||| |||||| |||||||||  ||| |||||||| |||||| ||||||||  ||||||| ||||||||||||| ||| |||    
T  43198441 ctaagttgtttatcttgttgttgatgttccagtaagactaatgcatatgaattgatgttgtttataatgtgatataattgtatatacattacttgaatta 43198540  T
Q  101 agtttg-ataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaagct 194  Q
      | || ||| |||||   ||| ||| ||  ||| |||||  ||||||||| |  || |||||||| || |||||||| ||||||||||| |||||||||    
T  43198541 tatatgaatatttgagatattgatgacttgcatttgatatggttatatcatgaattgttttgcatattgtctatgttgctgtttgttatttaactaagct 43198640  T
Q  195 gcatgagtcggtcta 209  Q
    |||||||||||||||    
T  43198641 gcatgagtcggtcta 43198655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 8846604 - 8846377
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| ||||| |||  ||||| |||||||||| ||| |||||||| |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  8846604 ctaagttgtttatcttgtagttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaatta 8846505  T
Q  101 agtttgataattgagttgctgat------------------tta-tattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtt 181  Q
     |||||||| ||||| || ||||                  |||  |||||||||| |||| |||| ||| |||||||||||||||||||| ||||||||    
T  8846504 tgtttgatatttgagatgttgatgacttgcattcgatattgttagcattcgatattgttatctcatgatgatttgcatactgcctatgttgctgtttgtt 8846405  T
Q  182 attcaactaagctgcatgagtcggtcta 209  Q
    ||| |||||||||| || ||||||||||    
T  8846404 atttaactaagctgaataagtcggtcta 8846377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 12288143 - 12288310
Alignment:
Q  46 tatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattata 143  Q
    ||||| ||||||||| |  ||||| |||||| | ||||||||||||||||| ||| |||||||  | ||| |||| ||| ||  ||| |||||| |||||    
T  12288143 tatgatttaatgttgttggtaatgttatatagttgtatatacattacatgaattatgtttgatgttgtgatgttgttgaattgcatttgatattgttata 12288242  T
Q  144 tcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |  ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  12288243 tcatgaactggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 12288310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 52243240 - 52243296
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  52243240 tttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 52243296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 17046559 - 17046508
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  17046559 atactacctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 17046508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 16377565 - 16377621
Alignment:
Q  152 gtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  16377565 gtttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 16377621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 3096369 - 3096314
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  3096369 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 3096314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 7088953 - 7088898
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  7088953 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 7088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 7798850 - 7798795
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  7798850 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 7798795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 12902833 - 12902778
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  12902833 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 12902778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 52873412 - 52873467
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  52873412 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 52873467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 14053344 - 14053401
Alignment:
Q  152 gtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||| |||||| ||||| |||||||||||||| ||||||| ||||||||||| ||||    
T  14053344 gtttgtatactgtctatgctgttgtttgttatttaactaagttgcatgagtcgatcta 14053401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 16270259 - 16270335
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||||| || |||||||||||||||||||||    
T  16270259 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttatttaattaagctgcatgagtcggtcta 16270335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 22636504 - 22636456
Alignment:
Q  160 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  22636504 actgtctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 22636456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 6190531 - 6190483
Alignment:
Q  161 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||| |||||| | || ||||||||||||||||||||||||    
T  6190531 ctgcctatgttgctgtttgatgtttaactaagctgcatgagtcggtcta 6190483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 23374404 - 23374459
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||| ||||    
T  23374404 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcgttcta 23374459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 54798822 - 54798854
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||||||||||||||||    
T  54798822 ttgttattcaactaagctgcatgagtcggtcta 54798854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 46640505 - 46640556
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| |||||||| ||||||||  | ||||||||||||||||||||||||    
T  46640505 atactgtctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 46640556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 53082202 - 53082252
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| ||||||| ||||||||  | ||||||||||||||||||||||||    
T  53082202 tactgcttatgttgctgtttgtttattaactaagctgcatgagtcggtcta 53082252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 12419 - 12451
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  12419 ttgttatttaactaagctgcatgagtcggtcta 12451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 1837621 - 1837653
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  1837621 ttgttatttaactaagctgcatgagtcggtcta 1837653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 6899967 - 6899912
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| | || |||||| ||||||| ||||||||||||||||    
T  6899967 tttgtatactgcctatgttgctatt-gttatttaactaagatgcatgagtcggtcta 6899912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 7641294 - 7641326
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  7641294 ttgttatttaactaagctgcatgagtcggtcta 7641326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 7893779 - 7893724
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| | || |||||| ||||||||||||||| ||||||||    
T  7893779 tttgtatactgcctatgttgctatt-gttatttaactaagctgcatgaatcggtcta 7893724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 8574935 - 8574967
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  8574935 ttgttatttaactaagctgcatgagtcggtcta 8574967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 12611000 - 12610968
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  12611000 ttgttatttaactaagctgcatgagtcggtcta 12610968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 14280366 - 14280334
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  14280366 ttgttatttaactaagctgcatgagtcggtcta 14280334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 15118464 - 15118496
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  15118464 ttgttatttaactaagctgcatgagtcggtcta 15118496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 15355437 - 15355469
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  15355437 ttgttatttaactaagctgcatgagtcggtcta 15355469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 18215386 - 18215418
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  18215386 ttgttatttaactaagctgcatgagtcggtcta 18215418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 18239531 - 18239563
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  18239531 ttgttatttaactaagctgcatgagtcggtcta 18239563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 19242749 - 19242717
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  19242749 ttgttatttaactaagctgcatgagtcggtcta 19242717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 19618284 - 19618316
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  19618284 ttgttatttaactaagctgcatgagtcggtcta 19618316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 23803377 - 23803409
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  23803377 ttgttatttaactaagctgcatgagtcggtcta 23803409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 44052905 - 44052854
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcgg 205  Q
    |||| ||||||||||||||| |||| |||||| |||| |||||||||||||||    
T  44052905 tttgtatactgcctatgttgatgtt-gttatttaactgagctgcatgagtcgg 44052854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 44102264 - 44102232
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  44102264 ttgttatttaactaagctgcatgagtcggtcta 44102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 44615338 - 44615306
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  44615338 ttgttatttaactaagctgcatgagtcggtcta 44615306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 44773199 - 44773231
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  44773199 ttgttatttaactaagctgcatgagtcggtcta 44773231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 44928992 - 44929024
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  44928992 ttgttatttaactaagctgcatgagtcggtcta 44929024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 50222451 - 50222483
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  50222451 ttgttatttaactaagctgcatgagtcggtcta 50222483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 51463980 - 51464012
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  51463980 ttgttatttaactaagctgcatgagtcggtcta 51464012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 52312560 - 52312528
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  52312560 ttgttatttaactaagctgcatgagtcggtcta 52312528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 4e-65; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 13210218 - 13210427
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaatt-aatgttgcttataatgatatataatcgtatatacattacatgactt 99  Q
    |||||||||||| |||||||||||  ||| |||||| ||| ||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  13210218 ctaagttgtttatcttgttgttaacattccagtaaggctgatgcatatgaattcaatgttgcttataatgttatataattgtatatacattacatgactt 13210317  T
Q  100 aagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatg 199  Q
    | |||||||| || ||||| ||||||  |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||    
T  13210318 atgtttgatatttaagttgttgatttgcattcgatattattatatcatgatggtttgcatactgcctatgttgctatttgttatttaactaagctgcatg 13210417  T
Q  200 agtcggtcta 209  Q
    ||||||||||    
T  13210418 agtcggtcta 13210427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 12174152 - 12174359
Alignment:
Q  2 taagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaa 101  Q
    ||||||||||| |||| ||||  ||||| |||||||||| ||| ||||||| ||||||| |||||||| |||||||| |||||||||||||||||||||     
T  12174152 taagttgtttagcttgctgttgttgttccagtaagactgatgcatatgaatcaatgttgtttataatgttatataattgtatatacattacatgacttat 12174251  T
Q  102 gtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgag 201  Q
    |||||||| |||||||| || |||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  12174252 gtttgatatttgagttgttgttttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgag 12174351  T
Q  202 tcggtcta 209  Q
    ||||||||    
T  12174352 tcggtcta 12174359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 16097560 - 16097349
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||  ||||| |||||||||| ||| |||||||| |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  16097560 ctaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaatta 16097461  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||   |||| ||| ||  |||||||||| |||||| || ||| |||||||| ||||||||||||||||||||||| ||||||||||||    
T  16097460 tgtttgatatttgagatgttgatgacttgcattcgatattgttatatgatgatgatttgcatattgcctatgttgttgtttgttatttaactaagctgca 16097361  T
Q  198 tgagtcggtcta 209  Q
    ||||||||||||    
T  16097360 tgagtcggtcta 16097349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 16104011 - 16103801
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||  ||||| |||||||||  | | |||||||| |||||| |||||||| ||||||||  ||||||||||| |||| |||    
T  16104011 ctaagttgtttatcttgctgttgttgttccagtaagactaatccatatgaattgatgttgtttataatgttatataattttatatacattaaatgaatta 16103912  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcat 198  Q
     |||||||| ||||| || || |  ||  |||||||||| ||||||||| ||| |||||||||||||||||||| |||| ||| || |||||||||||||    
T  16103911 tgtttgatatttgagatgttgttgattgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgttcgttgtttaactaagctgcat 16103812  T
Q  199 gagtcggtcta 209  Q
    |||||||||||    
T  16103811 gagtcggtcta 16103801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 32307899 - 32307698
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||| | ||||| |||||||||| ||||||||||||||||||| |||||||| |        |||||||||||| |||  |||    
T  32307899 ctaagttgtttatcttgctgtcattgttctagtaagactgatgcttatgaattaatgttgtttataatgtt--------gtatatacattaaatggatta 32307808  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcat 198  Q
     ||| |||||||||| || || |  ||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  32307807 tgtt-gataattgagatgttgttgattgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcat 32307709  T
Q  199 gagtcggtcta 209  Q
    |||||||||||    
T  32307708 gagtcggtcta 32307698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 9513139 - 9512941
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| |||||| |||||||| | ||||        ||||||| |||  |||    
T  9513139 ctaagttgtttaccttgttgttattgttccagtaagactgatgcatatgaattgatgttgtttataatgttttata--------tacattaaatggatta 9513048  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     ||| ||||| |||| || |||||   |||||||||| ||||||||| ||| |||||||||||||||||||| |||||||| || |||||||||||||||    
T  9513047 tgtt-gataaatgagatgttgattgc-attcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttgtttaactaagctgcatga 9512950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 9521114 - 9520916
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| |||||| ||||||||        |  ||||||||||| |||  |||    
T  9521114 ctaagttgtttaccttgttgttattgttccagtaagactgatgcatatgaattgatgttgtttataatg--------tgttatatacattaaatggatta 9521023  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     ||| ||||| |||| || |||||   |||||||||| ||||||||| ||| |||||||||||||||||||| |||||||| || |||||||||||||||    
T  9521022 tgtt-gataaatgagatgttgattgc-attcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttgtttaactaagctgcatga 9520925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 15471092 - 15470945
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||||| || ||||   ||  |||||||||| ||||||||| ||| |||||||||    
T  15471092 taatgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatac 15470993  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  15470992 tgcctatgttgctgtctgttatttaactaagctgcatgagtcggtcta 15470945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 49668095 - 49668176
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  49668095 attcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 49668176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 49389519 - 49389633
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||||||||  ||||| |||||||||| ||| |||||||| |||||| |||||||| |||||||| |||||||||||| |||| |||    
T  49389519 ctaagttgtttatcttgttgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattaaatgaatta 49389618  T
Q  101 agtttgataattgag 115  Q
     |||||||| |||||    
T  49389619 tgtttgatagttgag 49389633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 52523733 - 52523829
Alignment:
Q  115 gttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||  |||||||||| ||||||||| |  || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52523733 gttgttgatttgcattcgatattgttatatcatgaactgttttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 52523829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 14234655 - 14234508
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  |||||||||| ||||||||| ||| |||||||||    
T  14234655 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatttgcatac 14234556  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| || |||||||| ||||||||||||||| || |||||    
T  14234555 tgcctatgttgctgcttgttatttaactaagctgcatgaatcagtcta 14234508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 1644573 - 1644757
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||||||||| ||||| |||||||||| ||| |||||||| |||||| ||||||||        | |||||||||||| |||  |||    
T  1644573 ctaagttgtttatcttgttgttattgttccagtaagactgatgcatatgaattgatgttgtttataatg--------ttgtatatacattaaatggatta 1644664  T
Q  101 agtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagc 193  Q
     | ||||||||||||   ||| ||| || ||||||||||| |||||| || ||| ||||||||||||||||||||||| |||||||| ||||||||    
T  1644665 tg-ttgataattgagatattgttga-ttgtattcgatattgttatataatgatgatttgcatactgcctatgttgttg-ttgttatttaactaagc 1644757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 23274788 - 23274708
Alignment:
Q  129 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| || |||||| | ||||||| |||||||||| |||||    
T  23274788 ttcgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagttgcatgagtcagtcta 23274708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 24340743 - 24340823
Alignment:
Q  129 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||| ||| | |||||||||| ||||||| || |||||| | |||||||||||||||||| |||||    
T  24340743 ttcgatattattatatcatgatgttgtgcatactgcatatgttgctgattgttaattaactaagctgcatgagtcagtcta 24340823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 27165337 - 27165268
Alignment:
Q  140 tatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||  || ||||||||||| |||| ||| ||||||||||| ||||||||||||||||||||||||    
T  27165337 tatatcatgttgttttgcatactgtctatattgctgtttgttatttaactaagctgcatgagtcggtcta 27165268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 53301574 - 53301651
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| |||||||||  || ||||||||||| |||||||| ||||||||||| ||||||| || |||||||||||||    
T  53301574 gatattgttatatcatgttgttttgcatactgtctatgttgctgtttgttatttaactaagttgtatgagtcggtcta 53301651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 26686963 - 26686908
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  26686963 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 26686908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 37642287 - 37642363
Alignment:
Q  131 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || |  |||   ||||||||||||||||||||||    
T  37642287 cgatattattatatcatgatgttttgcatactgcctatgttgctgatcattaactaactaagctgcatgagtcggtc 37642363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 14572686 - 14572610
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| |||||| |||||||| |||| |||||| ||||||||||||||||||||||||    
T  14572686 gatattattatgtcatgctgttttgtatactgtctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 14572610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 12399285 - 12399230
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  12399285 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 12399230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 20698480 - 20698535
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  20698480 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 20698535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 28194755 - 28194711
Alignment:
Q  165 ctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||    
T  28194755 ctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 28194711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 18438632 - 18438555
Alignment:
Q  132 gatattattatatcattatggttt-gcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||  || ||| | ||||||||||||||| |||| |||||| ||||||||| ||||||||||||||    
T  18438632 gatattattatatcatgctgtttttgtatactgcctatgttgctgtt-gttatttaactaagctacatgagtcggtcta 18438555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 22110402 - 22110452
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  22110402 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 22110452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 23083384 - 23083461
Alignment:
Q  132 gatattattatatcattatggttt-gcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||| || ||| | ||||||||||||||| | || |||||| ||||||||||||||||||||||||    
T  23083384 gatattattatgtcattctgtttttgtatactgcctatgttgctatt-gttatttaactaagctgcatgagtcggtcta 23083461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 43926029 - 43925979
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  43926029 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 43925979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 11424783 - 11424859
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| |||| ||||  || |||| ||||||||||||||| |||| |||||| |||||||||||||||||| |||||    
T  11424783 gatattgttatgtcatgctgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcagtcta 11424859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 43841008 - 43840956
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    |||| |||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  43841008 tttgtatactgtctatgttgttgtt-gttatttaactaagctgcatgagtcggt 43840956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 13442350 - 13442295
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||||||||||||  ||| |||||| ||||||||||||||||||||||||    
T  13442350 tttgtatactgcctatgttgccgtt-gttatttaactaagctgcatgagtcggtcta 13442295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 14972930 - 14972875
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||| ||||| |||| |||||| ||||||||||||||||||||||||    
T  14972930 tttgtatactgcctgtgttgctgtt-gttatttaactaagctgcatgagtcggtcta 14972875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 17672687 - 17672644
Alignment:
Q  165 ctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||    
T  17672687 ctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 17672644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 42386486 - 42386431
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| |||||| |||||||||||||||||    
T  42386486 tttgtatactgcctatgttgctgtt-gttatttaactaaactgcatgagtcggtcta 42386431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12934201 - 12934268
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataat 68  Q
    |||||||||||| |||| ||| | ||||| |||||||||| ||| |||||||| |||||| |||||||    
T  12934201 ctaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgaattgatgttgtttataat 12934268  T

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Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 37251217 - 37251268
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||||||  | ||||||||||||||| ||||||||    
T  37251217 atactgcctatgttgctgtttgtttattaactaagctgcatgactcggtcta 37251268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 606378 - 606423
Alignment:
Q  161 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    |||||||||||| ||||||||  | |||||||||||||||||||||    
T  606378 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 606423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 24153232 - 24153308
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||| ||||||||| | |  |||||| ||||||||||||||||||||||||    
T  24153232 gatattattatgtcatgctgttttgtatactacctatgttgctatc-gttatttaactaagctgcatgagtcggtcta 24153308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 6469246 - 6469278
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  6469246 ttgttatttaactaagctgcatgagtcggtcta 6469278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 7781459 - 7781491
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  7781459 ttgttatttaactaagctgcatgagtcggtcta 7781491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 8499568 - 8499536
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  8499568 ttgttatttaactaagctgcatgagtcggtcta 8499536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 8899144 - 8899112
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  8899144 ttgttatttaactaagctgcatgagtcggtcta 8899112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 9707719 - 9707751
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  9707719 ttgttatttaactaagctgcatgagtcggtcta 9707751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 10557035 - 10557003
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  10557035 ttgttatttaactaagctgcatgagtcggtcta 10557003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 12377993 - 12377942
Alignment:
Q  158 atactgcctatgttgttgtttgt-tattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||||| |||| |||||||||| |||||||||||||    
T  12377993 atactgcctatgttgctgtttgtctatt-aactaagctgtatgagtcggtcta 12377942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 12567610 - 12567578
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  12567610 ttgttatttaactaagctgcatgagtcggtcta 12567578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 13544075 - 13544043
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  13544075 ttgttatttaactaagctgcatgagtcggtcta 13544043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 15412479 - 15412447
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  15412479 ttgttatttaactaagctgcatgagtcggtcta 15412447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 15977565 - 15977533
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  15977565 ttgttatttaactaagctgcatgagtcggtcta 15977533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 16282923 - 16282955
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  16282923 ttgttatttaactaagctgcatgagtcggtcta 16282955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 17463228 - 17463196
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  17463228 ttgttatttaactaagctgcatgagtcggtcta 17463196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 17487909 - 17487877
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  17487909 ttgttatttaactaagctgcatgagtcggtcta 17487877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 17499391 - 17499359
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  17499391 ttgttatttaactaagctgcatgagtcggtcta 17499359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 17737286 - 17737254
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  17737286 ttgttatttaactaagctgcatgagtcggtcta 17737254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 21618499 - 21618467
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  21618499 ttgttatttaactaagctgcatgagtcggtcta 21618467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 22147547 - 22147623
Alignment:
Q  131 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||||||||||||||| ||| ||||||||| ||||| |||| || |  |||   ||||||||||||||| ||||||    
T  22147547 cgatattattatatcatgatgttttgcataccgcctacgttgctgatcattaactaactaagctgcatgactcggtc 22147623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 28848723 - 28848755
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  28848723 ttgttatttaactaagctgcatgagtcggtcta 28848755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 29172695 - 29172727
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  29172695 ttgttatttaactaagctgcatgagtcggtcta 29172727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 34159376 - 34159344
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  34159376 ttgttatttaactaagctgcatgagtcggtcta 34159344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 36166648 - 36166616
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  36166648 ttgttatttaactaagctgcatgagtcggtcta 36166616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 38962003 - 38962035
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  38962003 ttgttatttaactaagctgcatgagtcggtcta 38962035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 41123940 - 41123908
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  41123940 ttgttatttaactaagctgcatgagtcggtcta 41123908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 43550568 - 43550623
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||| ||||||| |||   ||||| ||||||||||||||||||||||||    
T  43550568 tttgcatactgcatatgttgctgtca-ttatttaactaagctgcatgagtcggtcta 43550623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 45577950 - 45577982
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  45577950 ttgttatttaactaagctgcatgagtcggtcta 45577982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 45607019 - 45607051
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  45607019 ttgttatttaactaagctgcatgagtcggtcta 45607051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 50242872 - 50242840
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  50242872 ttgttatttaactaagctgcatgagtcggtcta 50242840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 53070765 - 53070797
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  53070765 ttgttatttaactaagctgcatgagtcggtcta 53070797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 55476541 - 55476509
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  55476541 ttgttatttaactaagctgcatgagtcggtcta 55476509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 55500992 - 55500960
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  55500992 ttgttatttaactaagctgcatgagtcggtcta 55500960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 29169 - 29354
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgat---atataatcgtatatacattacatgac 97  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||   ||||||| ||||||||| ||||||||    
T  29169 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataattatgttatataattgtatatacagtacatgac 29268  T
Q  98 ttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttat 183  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| ||||||||| ||||||||||    
T  29269 ttaagtttgataattgagttgctgatttacattcgatattattatatcatgatagtttgaatactacctatgttgctgtttgttat 29354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 8007 - 8174
Alignment:
Q  46 tatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattata 143  Q
    ||||| ||||||||| | |||||| |||||| | ||||||||||||||||| |||  | ||||  | ||| |||| |||||| |||| |||||| |||||    
T  8007 tatgatttaatgttgttgataatgttatatagttgtatatacattacatgaattatatatgatgttgtgatgttgttgatttgtatttgatattgttata 8106  T
Q  144 tcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |  ||||||| ||||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  8107 tcatgaactggtttgtatactgcctatgttgctgtttgtttgttaactaagctgcatgagtcggtcta 8174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 2334 - 2508
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||| ||||||||| | ||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||    
T  2334 ctaagttttttaccttgctattaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattaaatgactta 2433  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttg 175  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  2434 agtttgataattgagttgctgatttacattcgatattattatatcatgatggtttgcatacggtctaagttgttg 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 7041 - 6833
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||  ||||| |||||||||| ||| ||||||||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  7041 ctaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattaatgttgtttataatgttatataattgtatatacattacatgactta 6942  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     |||||||| |||||||| ||||||  |||| ||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  6941 tgtttgatatttgagttgttgatttgcattcaatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactgagctgcatga 6842  T
Q  201 gtcggtcta 209  Q
    |||||||||    
T  6841 gtcggtcta 6833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 1022 - 1169
Alignment:
Q  62 ttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  1022 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 1121  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1122 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 1169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 10430 - 10641
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||||||||  ||||| |||||||||| ||| |||||||| |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  10430 ctaagttgtttatcttgttgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaatta 10529  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||    
T  10530 tgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgca 10629  T
Q  198 tgagtcggtcta 209  Q
    | ||||||||||    
T  10630 taagtcggtcta 10641  T

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Target: scaffold0125 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 45681 - 45892
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||  ||| ||| | ||||| |||||||||| ||| |||||||| |||||| |||||||| |||||||| |||||||||| |||||| |||    
T  45681 ctaagttgtttatattgctgtaattgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacatcacatgaatta 45780  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||||||||   |||| ||| ||| |||||||||| ||||||||| ||| |||||||||||||||| ||  ||||||||||| ||||||||||||    
T  45781 tgtttgataattgagatgttgatgacttacattcgatattgttatatcatgatgatttgcatactgcctatttttctgtttgttatttaactaagctgca 45880  T
Q  198 tgagtcggtcta 209  Q
    ||||||||||||    
T  45881 tgagtcggtcta 45892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 94; Significance: 4e-46; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 130137 - 129926
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||  ||||| |||||||||| ||| |||||||| |||||| ||| |||| |||||||| ||||||||||||||||| |||    
T  130137 ctaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttacaatgttatataattgtatatacattacatgaatta 130038  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||| ||||||| ||||||| ||||    
T  130037 tgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtgtgttatttaactaagatgca 129938  T
Q  198 tgagtcggtcta 209  Q
    ||||||||||||    
T  129937 tgagtcggtcta 129926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 60760 - 60813
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    |||| ||||||||||||||| ||||||||  | |||||||||||||||||||||    
T  60760 tttgtatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 60813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 160915 - 160705
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||||||||  ||||   ||||||||| ||| |||||||| |||||| |||||||| |||||||| ||||||| |||||||||||||    
T  160915 ctaagttgtttatcttgttgttgttgtttcggtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatatattacatgactta 160816  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||   |||| |||||   ||| |||||| ||||||||| ||| |||||||||||||||||||| || |||||||| ||||||||||||    
T  160815 tgtttgatatttgacatgttgttgattgc-atttgatattgttatatcatgatgatttgcatactgcctatgttgctgattgttatttaactaagctgca 160717  T
Q  198 tgagtcggtcta 209  Q
    ||||||||||||    
T  160716 tgagtcggtcta 160705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 85692 - 85724
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  85692 ttgttatttaactaagctgcatgagtcggtcta 85724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 501134 - 501102
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  501134 ttgttatttaactaagctgcatgagtcggtcta 501102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 209
Target Start/End: Complemental strand, 337 - 150
Alignment:
Q  25 tgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctg 121  Q
    ||||| ||| |||||| | | |||||||| |||||| |||||||  |||||||| ||||||||||||||||| ||| |||||||| |||||   ||| ||    
T  337 tgttctagtgagactgatacatatgaattgatgttgtttataatattatataattgtatatacattacatgaattatgtttgatatttgagatgttgttg 238  T
Q  122 atttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||  |||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  237 atttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttgtttaactaagctgcatgaatcggtcta 150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 1314 - 1103
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||| |||| |||||||||  ||||| |||||||||| ||  ||||| || |||||| |  ||||| |||||| | ||||||||||| ||||| |||    
T  1314 ctaagttttttatcttgttgttgttgttccagtaagactgatgtatatgatttgatgttgttgttaatgttatatagttgtatatacattccatgaatta 1215  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||  ||||   |||| |||  | ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  1214 tgtttgatgtttgaaatgttgatgacctgtattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttatttaactaagctgca 1115  T
Q  198 tgagtcggtcta 209  Q
    ||||||||||||    
T  1114 tgagtcggtcta 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 22563 - 22770
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||  |||| ||||  ||||| |||||||||| ||| |||    | |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  22563 ctaagttgtttgtcttgatgttgctgttccagtaagactgatgcatat----tgatgttgtttataatgttatataattgtatatacattacatgaatta 22658  T
Q  101 agtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||| || ||||   ||  |||||||||| ||||||||| ||| ||||||||||| |||||| | ||||||||||| ||||||||||||    
T  22659 tgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgtctatgtcgctgtttgttatttaactaagctgca 22758  T
Q  198 tgagtcggtcta 209  Q
    ||||||||||||    
T  22759 tgagtcggtcta 22770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 70; Significance: 9e-32; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 6702 - 6556
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||    
T  6702 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatac 6604  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  6603 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 6556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 8701 - 8487
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatc--gtatatacattacatgact 98  Q
    |||||||||||| |||| || |  ||||| |||||||||| ||  |||||||| |||||| ||||||||  |||||||   ||||||||||||| ||| |    
T  8701 ctaagttgtttatcttgctgatgttgttccagtaagactgatgtatatgaattgatgttgtttataatgtgatataatattgtatatacattacttgaat 8602  T
Q  99 taagtttga-taattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagct 194  Q
    ||  | ||| || ||||| || ||||   ||  ||| |||||| |||||||||  || |||||||||||||||||||||||||||||||| |||||||||    
T  8601 tatatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgctgttttgcatactgcctatgttgttgtttgttatttaactaagct 8502  T
Q  195 gcatgagtcggtcta 209  Q
    |||||||||||||||    
T  8501 gcatgagtcggtcta 8487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 19431 - 19285
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||    
T  19431 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatac 19333  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  19332 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 19285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 70; Significance: 9e-32; HSPs: 7)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 100541 - 100395
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| |||  ||| |||||   ||| ||||||  |||||||||||||||||||| ||| |||||||||    
T  100541 taatgttatataattgtatatacattatatgaattatgtta-atatttgagatgttgttgatttgcattcgatattattatatcatgatgatttgcatac 100443  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  100442 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 100395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 40128 - 40274
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||||| |||    
T  40128 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcctac 40226  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||| ||||| |||||||||||||||||| |||||    
T  40227 tgcctatgttgctgtttattatttaactaagctgcatgagtcagtcta 40274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 101581 - 101520
Alignment:
Q  148 tatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  101581 tatggtttgcatactgcctatgttgttgtttgttgtttaactaagctgcatgaatcggtcta 101520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 119948 - 119896
Alignment:
Q  157 catactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  119948 catactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 119896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 17552 - 17584
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  17552 ttgttatttaactaagctgcatgagtcggtcta 17584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 44504 - 44472
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  44504 ttgttatttaactaagctgcatgagtcggtcta 44472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 94461 - 94429
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  94461 ttgttatttaactaagctgcatgagtcggtcta 94429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 6713 - 6632
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6713 attcgatattgttatatcatcatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 6632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 14093 - 14012
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14093 attcgatattgttatatcatcatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 14012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 15796 - 15877
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15796 attcgatattgttatatcatcatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 15877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 12934 - 12787
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  |||||||||| ||||||||| ||| ||||||||     
T  12934 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatttgcatat 12835  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  12834 tgcctatgttgttgtttgttatttagctaagctgcatgagtcggtcta 12787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 72 - 209
Target Start/End: Complemental strand, 10688 - 10548
Alignment:
Q  72 atataatcgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctat 168  Q
    ||||||| ||||||||||||||||| ||| ||| |||  ||||| || ||||   ||  |||||||||| ||||||||| ||| ||||||||||||||||    
T  10688 atataattgtatatacattacatgaattatgttcgatgtttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcctat 10589  T
Q  169 gttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||| ||  ||||||||||||||||||||    
T  10588 gttgttgtttgttatttaaaaaagctgcatgagtcggtcta 10548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 5810 - 5664
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||| |||||    
T  5810 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgattttcatac 5712  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||    
T  5711 tgcctatgttgctgtttgttattttactaagctgcatgagtcggtcta 5664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 987 - 1134
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  ||||||| || ||||||||| ||| | |||||||    
T  987 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgcattcgatgttgttatatcatgatgatctgcatac 1086  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1087 tacctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 1134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 6076 - 6223
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||  || |||  ||| ||  |||||||||| ||||||||| ||| |||||||||    
T  6076 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttaatgacttgcattcgatattgttatatcatgatgatttgcatac 6175  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  6176 tgcctatgttactgtttgttatttaactaagctgcatgagtcggtcta 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 2599 - 2745
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||| ||||| ||||| ||| ||| ||| |||||    
T  2599 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcaatattgttataacatgatgatttacatac 2697  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  2698 tgcctatgttgatgtttgttatttaactaagctgcatgagtcggtcta 2745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 23902 - 23983
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  23902 attcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctacatgagtcggtcta 23983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 58; Significance: 1e-24; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 62362 - 62222
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgc 164  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| ||||| || || | |  |||||||||||||||| ||| ||| ||| ||||||||    
T  62362 taatgttatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgtgcattcgatattattataccatgatgtttttcatactgc 62264  T
Q  165 ctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    |||||||| |||||||| || |||||||||||||||||||||    
T  62263 ctatgttgctgtttgttgtttaactaagctgcatgagtcggt 62222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 132883 - 132679
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||  ||||  ||||| |||||||||| ||| |||||||| |||||| |||||||| | ||||      ||||||||| |||  |||    
T  132883 ctaagttgtttatcttactgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttgtata------tatacattaaatggatta 132790  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggttt-gcatactgcctatgttgttgtttgttattcaactaagctgca 197  Q
     ||| ||||||||||  | ||||  ||| |||||||||| || |||||| ||| ||| ||||||| | ||||||| ||||||||||| | ||||||||||    
T  132789 tgtt-gataattgagacgttgatgattacattcgatattgttgtatcatgatgattttgcatactacttatgttgctgtttgttatttatctaagctgca 132691  T
Q  198 tgagtcggtcta 209  Q
    ||||||||||||    
T  132690 tgagtcggtcta 132679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 134261 - 134229
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  134261 ttgttatttaactaagctgcatgagtcggtcta 134229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 136730 - 136698
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  136730 ttgttatttaactaagctgcatgagtcggtcta 136698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 139199 - 139167
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  139199 ttgttatttaactaagctgcatgagtcggtcta 139167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 144137 - 144105
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  144137 ttgttatttaactaagctgcatgagtcggtcta 144105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 14651 - 14797
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  ||||||||||| |||||||| ||| ||| | |||    
T  14651 taatggtatataatagtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattactatatcatgatgattttcttac 14749  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  14750 tgcctatgttgctgtttgttagttaactaagctgcatgagtcggtcta 14797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 13107 - 12960
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||||| || ||| |||||||  ||  || |||| ||| ||  |||||||||| |||||||||  || |||||||||    
T  13107 taatgttatataattgtatatacattacacgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgctgatttgcatac 13008  T
Q  162 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||||    
T  13007 tgcctatgttgttgtttgttatttaactgagcagcatgagtcggtcta 12960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 127 - 209
Target Start/End: Complemental strand, 1135 - 1053
Alignment:
Q  127 tattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||| |||||||||  || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  1135 tatttgatattgttatatcatgctgttttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 1053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 2812 - 2906
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||  ||| |||||| ||||||||| ||| |||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  2812 gttgttgatttgcatttgatattgttatatcatgatgatttgcatactgcctatgtagctgtttgttatttaactaagctgcatgagtcggtcta 2906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 53437 - 53649
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||  |||| |||||| |||||||||| || |||||| || |||||| ||||||||  ||||||| ||||||||||||| ||| |||    
T  53437 ctaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgatgttgtttataatgtgatataattgtatatacattacttgaatta 53536  T
Q  101 agtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgc 196  Q
      | || ||| ||||   |||| ||| ||  ||| |||||| |||||||||  || |||||||||||||||||||| ||||||||  | |||||||||||    
T  53537 tatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgttgttttgcatactgcctatgttgctgtttgtttattaactaagctgc 53636  T
Q  197 atgagtcggtcta 209  Q
    |||| || |||||    
T  53637 atgaatcagtcta 53649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 32323 - 32119
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||  ||||  ||||| |||||||||| ||| |||||||| |||||| |||||||| | ||||      ||||||||| |||  |||    
T  32323 ctaagttgtttatcttactgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttgtata------tatacattaaatggatta 32230  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggttt-gcatactgcctatgttgttgtttgttattcaactaagctgca 197  Q
     ||| ||||||||||  | ||||  ||| |||||||||| ||||||||| ||| ||| ||||||| | ||||||||||||||||||| | ||||||||||    
T  32229 tgtt-gataattgagacgttgatgattacattcgatattgttatatcatgatgattttgcatactacttatgttgttgtttgttatttatctaagctgca 32131  T
Q  198 tgagtcggtcta 209  Q
    ||||||||||||    
T  32130 tgagtcggtcta 32119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 32703 - 32557
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatact 162  Q
    ||||| |||||| | ||||||||||||||||| ||| |||||||  ||||| || || |  ||  ||| |||||| |||||||||  || ||||||||||    
T  32703 taatgttatatagttgtatatacattacatgaattatgtttgatgtttgagatgttgttgattgcatttgatattgttatatcatgttgttttgcatact 32604  T
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||| ||||||||  | ||||||||||||||||||||||||    
T  32603 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 32557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 13243 - 13149
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||  ||| |||||| |||||||||  || |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  13243 gttgttgatttgcatttgatattgttatatcatgctgttttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtcta 13149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 16106 - 16200
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||| ||| |||||| |||||||||  || |||||||||| ||||||||||||||||||  | ||||||||||||||||||||||||    
T  16106 gttgttgatttacatttgatattgttatatcatgttgttttgcatactacctatgttgttgtttgtttattaactaagctgcatgagtcggtcta 16200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 2732 - 2682
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||||||||    
T  2732 tactgcctatgttgttgcttgtttattaactaagctgcatgagtcggtcta 2682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 27755 - 27849
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||| ||| |||||| |||||||||  || |||||||||| ||||||||||||||||||  | ||||||||||||||||||||||||    
T  27755 gttgttgatttacatttgatattgttatatcatgctgttttgcatactacctatgttgttgtttgtttattaactaagctgcatgagtcggtcta 27849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 11563 - 11491
Alignment:
Q  131 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtc 203  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || |||||| | ||||||||||||||||||    
T  11563 cgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagctgcatgagtc 11491  T

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Target: scaffold0124 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 38278 - 38350
Alignment:
Q  131 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtc 203  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || |||||| | ||||||||||||||||||    
T  38278 cgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagctgcatgagtc 38350  T

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Target: scaffold0106 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 7338 - 7287
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7338 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtcta 7287  T

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Target: scaffold0106; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 1359 - 1310
Alignment:
Q  160 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  1359 actgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 1310  T

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Target: scaffold0106; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 15306 - 15338
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  15306 ttgttatttaactaagctgcatgagtcggtcta 15338  T

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Target: scaffold0141 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 39574 - 39498
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  39574 gatattattatgtcatgctgttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 39498  T

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Target: scaffold0049 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 75238 - 75314
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  75238 gatattattatgtcatgctgttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 75314  T

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Target: scaffold0032 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 51654 - 51603
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  51654 atactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 51603  T

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Target: scaffold0021 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 174838 - 174787
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  174838 atactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtcta 174787  T

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Target: scaffold0021; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 121835 - 121787
Alignment:
Q  160 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  121835 actgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 121787  T

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Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 339972 - 340047
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| |||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  339972 gatattattatgtcatgttgttttgtatactgcctatgttgttgt--gttatttaactaagctgcatgagtcggtcta 340047  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 158562 - 158594
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  158562 ttgttatttaactaagctgcatgagtcggtcta 158594  T

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Target: scaffold0540 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 3174 - 3250
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  3174 gatattattatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 3250  T

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Target: scaffold0413 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 12666 - 12589
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| |||||||||  || |||||||||||||||||||| ||||||||  | ||||||||| ||||||||||||||    
T  12666 gatattgttatatcatgctgttttgcatactgcctatgttgctgtttgtttattaactaagctacatgagtcggtcta 12589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 38725 - 38802
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||| |||||||||  || ||||||||||| |||||||| ||||||||||| ||||||| ||||||||| ||||||    
T  38725 gatattgttatatcatgttgttttgcatactgtctatgttgctgtttgttatttaactaaggtgcatgagtaggtcta 38802  T

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Target: scaffold0064 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 47065 - 47016
Alignment:
Q  160 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  47065 actgcctatgttgttgtttgttatttaactaagctacatgagtcggtcta 47016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 1093 - 1148
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  1093 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 1148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 4788 - 4733
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  4788 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 4733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 18047 - 18127
Alignment:
Q  129 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||| ||| | |||||| ||| ||||||| || |||||| | |||||||||||||||||| |||||    
T  18047 ttcgatattattatatcatgatgttgtgcataatgcatatgttgctgattgttaattaactaagctgcatgagtcagtcta 18127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 16189 - 16134
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  16189 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 16134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 32980 - 33056
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||| ||||| |||| |||| | ||||||||||||||||||||||||    
T  32980 gatattattatgtcatgctgttttgtatactgcctgtgttgctgtt-gttaattaactaagctgcatgagtcggtcta 33056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 46025 - 45949
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||| ||||| |||| |||| | ||||||||||||||||||||||||    
T  46025 gatattattatgtcatgctgttttgtatactgcctgtgttgctgtt-gttaattaactaagctgcatgagtcggtcta 45949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 168023 - 168078
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  168023 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtcta 168078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 51989 - 51934
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||| ||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  51989 tttgtatattgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 51934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 3192 - 3286
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggttt-gcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||| ||| ||| ||||||||||||||||  || ||| | ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  3192 gttgttgaattacatttgatattattatatcatgctgtttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 3286  T

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Target: scaffold0351 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 16354 - 16303
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  16354 atactgcctatgttgctgtttcttatttaactaagctgcatgagtcggtcta 16303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 129021 - 129070
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  129021 tactgcctatgttgctgtttgttatt-aactaagctgcatgagtcggtcta 129070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 78391 - 78345
Alignment:
Q  161 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    |||||||||||| ||||||||  | ||||||||||||||||||||||    
T  78391 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtc 78345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 116480 - 116448
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  116480 ttgttatttaactaagctgcatgagtcggtcta 116448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 5183 - 5228
Alignment:
Q  164 cctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  5183 cctatgttgatgtttgttatttaactaagctgcatgagtcggtcta 5228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 13594 - 13518
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| || ||||  || |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  13594 gatattatcatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 13518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 8082 - 8161
Alignment:
Q  132 gatattattatatcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||| |  || ||||||||||||||||| || | ||||||||| || ||||||||||| |||||||||    
T  8082 gatattattatatcatgagctgatttgcatactgcctatgctgctatttgttatttaattaagctgcatgcgtcggtcta 8161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 419 - 364
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||||||||||| ||||| |||||| ||||||||||||||||||||||||    
T  419 tttgtatactgcctatgttattgtt-gttatttaactaagctgcatgagtcggtcta 364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 3546 - 3491
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| | || |||||| ||||||||| ||||||||||||||    
T  3546 tttgtatactgcctatgttgct-ttagttatttaactaagctacatgagtcggtcta 3491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 26110 - 26165
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  26110 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 26165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 44752 - 44807
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||| ||||| |||| |||||| |||||||||||||||||| |||||    
T  44752 tttgtatactgcctgtgttgctgtt-gttatttaactaagctgcatgagtcagtcta 44807  T

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Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 17262 - 17317
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  17262 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 17317  T

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Target: scaffold0056; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 79396 - 79428
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  79396 ttgttatttaactaagctgcatgagtcggtcta 79428  T

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Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 24348 - 24403
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  24348 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 24403  T

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Target: scaffold0647 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 6166 - 6224
Alignment:
Q  153 tttgcatactgcctatgttgttgtt--tgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||    
T  6166 tttgtatactacctatgttgttgttgttgttatttaactaagctgcatgagtcggtcta 6224  T

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Target: scaffold0598 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 1098 - 1149
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||| ||| | ||||||||||||||||||||||||    
T  1098 atactgcctatgttgatgtttattaattaactaagctgcatgagtcggtcta 1149  T

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Target: scaffold0456 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 10472 - 10523
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||||||| | ||||| ||||||||||||||||||    
T  10472 atactgcctatgttgctgtttgttaattaactatgctgcatgagtcggtcta 10523  T

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Target: scaffold0211 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28700 - 28775
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaattaatgttgcttataatgatatata 76  Q
    |||||||||||| |||| ||| | ||||| |||||||||| ||| |||||||| |||||| |||||||| ||||||    
T  28700 ctaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgaattgatgttgtttataatgttatata 28775  T

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Target: scaffold0211; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 28813 - 28870
Alignment:
Q  153 tttgcatactgcctatgttgttgtt-tgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||||||| |||  |||| || ||||||||||||||||||||||||    
T  28813 tttgcatactgcctatgttgctgtaatgttgtttaactaagctgcatgagtcggtcta 28870  T

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Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 25178 - 25127
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  25178 atactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 25127  T

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Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 4599 - 4545
Alignment:
Q  154 ttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||||| ||||||| |||||| ||||||| ||||||||||||||||    
T  4599 ttgcatactgcctatgctgttgtt-gttatttaactaagttgcatgagtcggtcta 4545  T

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Target: scaffold1257 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 174
Target Start/End: Original strand, 2172 - 2283
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| | | |||| |||||   ||| ||||||  ||| |||||| ||||||||| ||| |||||||||    
T  2172 taatggtatataattgtatatacattatatgaattatgct-gatatttgagatgttgttgatttgcatttgatattgttatatcatgatgatttgcatac 2270  T
Q  162 tgcctatgttgtt 174  Q
    |||||||||||||    
T  2271 tgcctatgttgtt 2283  T

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Target: scaffold0113 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 32137 - 32088
Alignment:
Q  159 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  32137 tactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 32088  T

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Target: scaffold0420 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 13793 - 13838
Alignment:
Q  164 cctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||    
T  13793 cctatgttgttgtttgttcattaactaagctgcatgagtcggtcta 13838  T

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Target: scaffold0420; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 6333 - 6384
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||||||  | ||||||| ||||||||||||||||    
T  6333 atactgcctatgttgctgtttgttcattaactaagttgcatgagtcggtcta 6384  T

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Target: scaffold0235 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 11488 - 11540
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    |||| ||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  11488 tttgtatactacctatgttgttgtt-gttatttaactaagctgcatgagtcggt 11540  T

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Target: scaffold0145 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 33039 - 32963
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||||| || |||||||||||||||||||||    
T  33039 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttatttaattaagctgcatgagtcggtcta 32963  T

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Target: scaffold0145; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 38858 - 38782
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||||| || |||||||||||| ||||||||    
T  38858 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttatttaattaagctgcatgactcggtcta 38782  T

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Target: scaffold0145; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 9799 - 9767
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  9799 ttgttatttaactaagctgcatgagtcggtcta 9767  T

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Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 38388 - 38339
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||||||||||||| ||||||||  | ||||||||||||||||||||||    
T  38388 atactgcctatgttgctgtttgttcattaactaagctgcatgagtcggtc 38339  T

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Target: scaffold0114 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 15487 - 15563
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||||| |||||||||||||||||| |||||    
T  15487 gatattattatgtcatgttgttttgtatactgcctatgttgctctt-gttatttaactaagctgcatgagtcagtcta 15563  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 25993 - 25917
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| |||| ||  |||| ||||||||||||||| | || |||||| ||||||||| ||||||||||||||    
T  25993 gatattattatgtcatgatattttgtatactgcctatgttgctatt-gttatttaactaagcttcatgagtcggtcta 25917  T

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Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 39955 - 39879
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| |||| ||  |||| ||||||||||||||| |  |||||||| ||||||||| ||||||| ||||||    
T  39955 gatattattatgtcatgatattttgtatactgcctatgttgct-attgttatttaactaagcttcatgagttggtcta 39879  T

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Target: scaffold1403 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 619 - 571
Alignment:
Q  161 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  619 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtcta 571  T

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Target: scaffold0403 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 4925 - 4870
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| |||||| |||||||||||||||||    
T  4925 tttgtatactgcctatgttgctgtt-gttatttaactaatctgcatgagtcggtcta 4870  T

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Target: scaffold0193 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 13287 - 13232
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||||| |||| |||||| |||||||||||||||||| |||||    
T  13287 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcagtcta 13232  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 1927 - 1872
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| |||||| |||||||| |||| |||||| ||||||||||||||||||||||||    
T  1927 tttgtatactgtctatgttgctgtt-gttatttaactaagctgcatgagtcggtcta 1872  T

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Target: scaffold0080 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 19934 - 19985
Alignment:
Q  158 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||||||  | || |||||||||||||||||||||    
T  19934 atactgcctatgttgctgtttgtttattaattaagctgcatgagtcggtcta 19985  T

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Target: scaffold0080; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 40010 - 39934
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||||| || |||||||||||||| ||||||    
T  40010 gatattattatgtcatgttgttttgtatactgcctatgttgctatt-gttatttaattaagctgcatgagttggtcta 39934  T

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Target: scaffold0761 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 4347 - 4315
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  4347 ttgttatttaactaagctgcatgagtcggtcta 4315  T

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Target: scaffold0716 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 4744 - 4712
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  4744 ttgttatttaactaagctgcatgagtcggtcta 4712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 12016 - 11984
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  12016 ttgttatttaactaagctgcatgagtcggtcta 11984  T

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Target: scaffold0490 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 2028 - 1973
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||| ||||||||||||| | |||| |||| | ||||||||||||||||||||||||    
T  2028 tttgtatactgcctatgtcgctgtt-gttaattaactaagctgcatgagtcggtcta 1973  T

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Target: scaffold0475 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 9180 - 9136
Alignment:
Q  128 attcgatattattatatcattatggtttgcatactgcctatgttg 172  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||    
T  9180 attcgatattgttatatcatgatgagttgcatactgcctatgttg 9136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 10823 - 10791
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  10823 ttgttatttaactaagctgcatgagtcggtcta 10791  T

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Target: scaffold0444 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 13442 - 13410
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  13442 ttgttatttaactaagctgcatgagtcggtcta 13410  T

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Target: scaffold0363 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 9292 - 9260
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  9292 ttgttatttaactaagctgcatgagtcggtcta 9260  T

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Target: scaffold0254 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 20797 - 20765
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  20797 ttgttatttaactaagctgcatgagtcggtcta 20765  T

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Target: scaffold0231 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 22936 - 22904
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  22936 ttgttatttaactaagctgcatgagtcggtcta 22904  T

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Target: scaffold0217 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 16668 - 16700
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  16668 ttgttatttaactaagctgcatgagtcggtcta 16700  T

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Target: scaffold0149 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 29982 - 29950
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  29982 ttgttatttaactaagctgcatgagtcggtcta 29950  T

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Target: scaffold0142 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 16834 - 16802
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  16834 ttgttatttaactaagctgcatgagtcggtcta 16802  T

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Target: scaffold0134 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 37871 - 37839
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  37871 ttgttatttaactaagctgcatgagtcggtcta 37839  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 8556 - 8629
Alignment:
Q  132 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||| ||||  || |||  |||||||||||||||     ||||||| ||||||||||||||||||||||||    
T  8556 gatattattatgtcatgctgtttttgatactgcctatgttg----ctgttatttaactaagctgcatgagtcggtcta 8629  T

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Target: scaffold0090 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 2747 - 2696
Alignment:
Q  158 atactgcctatgttgttgtttgt-tattcaactaagctgcatgagtcggtcta 209  Q
    ||||||||||||||| ||||||| |||| | ||||||||||||||||||||||    
T  2747 atactgcctatgttgctgtttgtctattga-ctaagctgcatgagtcggtcta 2696  T

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Target: scaffold0088 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 20987 - 20931
Alignment:
Q  153 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||| || |||||| | |||||||||  |||||||||||||    
T  20987 tttgcatattgcctatgttgctgattgttaattaactaagctttatgagtcggtcta 20931  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 20490 - 20522
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtcta 209  Q
    |||||||| ||||||||||||||||||||||||    
T  20490 ttgttatttaactaagctgcatgagtcggtcta 20522  T

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