View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3024_high_8 (Length: 278)

Name: NF3024_high_8
Description: NF3024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3024_high_8
NF3024_high_8
[»] chr2 (49 HSPs)
chr2 (1-169)||(28844449-28844617)
chr2 (1-168)||(28740431-28740598)
chr2 (1-169)||(26788678-26788846)
chr2 (1-169)||(215373-215541)
chr2 (1-169)||(7026497-7026666)
chr2 (1-169)||(33135517-33135685)
chr2 (1-162)||(3574748-3574909)
chr2 (1-169)||(3463565-3463734)
chr2 (1-169)||(13833570-13833738)
chr2 (1-169)||(10657300-10657468)
chr2 (9-176)||(16269578-16269745)
chr2 (9-171)||(20605044-20605206)
chr2 (1-171)||(22551911-22552081)
chr2 (1-169)||(6224696-6224864)
chr2 (9-174)||(44765664-44765829)
chr2 (9-171)||(24776247-24776409)
chr2 (9-171)||(31170780-31170942)
chr2 (1-169)||(10125438-10125608)
chr2 (9-156)||(32125157-32125304)
chr2 (31-169)||(378873-379011)
chr2 (174-264)||(27313511-27313599)
chr2 (1-64)||(18177266-18177329)
chr2 (9-171)||(12407272-12407434)
chr2 (9-171)||(14198733-14198894)
chr2 (1-64)||(25288158-25288221)
chr2 (100-169)||(43078569-43078638)
chr2 (9-148)||(35316977-35317116)
chr2 (9-148)||(43847561-43847700)
chr2 (9-147)||(26601356-26601494)
chr2 (9-171)||(305621-305785)
chr2 (9-121)||(20605178-20605290)
chr2 (13-171)||(1789334-1789492)
chr2 (10-74)||(5093204-5093268)
chr2 (107-169)||(43825085-43825147)
chr2 (90-171)||(3858188-3858269)
chr2 (90-171)||(18176471-18176552)
chr2 (7-171)||(19144916-19145082)
chr2 (100-171)||(9120060-9120131)
chr2 (100-171)||(39698609-39698680)
chr2 (11-64)||(9120125-9120178)
chr2 (6-74)||(378926-378994)
chr2 (6-42)||(11534881-11534917)
chr2 (6-42)||(34028935-34028971)
chr2 (90-148)||(2288485-2288541)
chr2 (11-73)||(5093247-5093309)
chr2 (90-147)||(21987316-21987373)
chr2 (97-146)||(42863107-42863156)
chr2 (6-42)||(20157759-20157795)
chr2 (6-42)||(24193595-24193631)
[»] chr8 (49 HSPs)
chr8 (1-169)||(14782280-14782448)
chr8 (1-169)||(44725955-44726123)
chr8 (2-169)||(7466228-7466395)
chr8 (3-169)||(16362089-16362255)
chr8 (3-169)||(4031405-4031571)
chr8 (1-167)||(39467613-39467778)
chr8 (1-169)||(10295526-10295694)
chr8 (1-161)||(18306106-18306266)
chr8 (1-169)||(18958872-18959040)
chr8 (1-169)||(19718026-19718194)
chr8 (1-169)||(42305930-42306098)
chr8 (1-169)||(31623588-31623756)
chr8 (17-169)||(43166809-43166961)
chr8 (1-169)||(26855961-26856128)
chr8 (1-169)||(4403000-4403168)
chr8 (1-169)||(9288602-9288763)
chr8 (13-169)||(32497376-32497532)
chr8 (1-121)||(32497466-32497586)
chr8 (9-171)||(23115321-23115483)
chr8 (9-170)||(41478989-41479150)
chr8 (9-147)||(2704972-2705110)
chr8 (9-171)||(5576774-5576936)
chr8 (9-155)||(42938270-42938416)
chr8 (11-170)||(43959549-43959708)
chr8 (9-143)||(32711435-32711569)
chr8 (9-171)||(42735430-42735592)
chr8 (9-169)||(26374583-26374741)
chr8 (100-169)||(43308523-43308592)
chr8 (9-171)||(7507052-7507214)
chr8 (29-169)||(39189944-39190084)
chr8 (100-171)||(42937251-42937322)
chr8 (97-167)||(37857098-37857168)
chr8 (1-64)||(10392382-10392445)
chr8 (9-74)||(24501966-24502031)
chr8 (1-169)||(9770962-9771128)
chr8 (100-148)||(26373719-26373767)
chr8 (9-74)||(43166843-43166908)
chr8 (100-176)||(14061542-14061618)
chr8 (100-176)||(24214835-24214911)
chr8 (100-147)||(24502015-24502062)
chr8 (100-171)||(35142043-35142114)
chr8 (15-74)||(42937341-42937400)
chr8 (6-74)||(32497429-32497497)
chr8 (16-64)||(39189973-39190021)
chr8 (100-171)||(29260288-29260359)
chr8 (9-42)||(4302813-4302846)
chr8 (97-146)||(8502657-8502706)
chr8 (95-147)||(7148071-7148123)
chr8 (6-42)||(37567365-37567401)
[»] chr6 (27 HSPs)
chr6 (1-169)||(34773301-34773469)
chr6 (1-169)||(31895588-31895756)
chr6 (1-169)||(14262578-14262746)
chr6 (9-171)||(2300891-2301053)
chr6 (1-171)||(7051735-7051905)
chr6 (9-171)||(6197631-6197793)
chr6 (9-147)||(1391538-1391676)
chr6 (17-169)||(7497010-7497162)
chr6 (1-74)||(34759195-34759269)
chr6 (1-74)||(30385202-30385275)
chr6 (15-171)||(29076487-29076644)
chr6 (15-171)||(29111460-29111617)
chr6 (9-145)||(28002581-28002717)
chr6 (90-147)||(31609694-31609751)
chr6 (90-171)||(7100165-7100246)
chr6 (90-171)||(8794384-8794465)
chr6 (97-146)||(11007691-11007740)
chr6 (9-64)||(656963-657017)
chr6 (90-148)||(708939-708997)
chr6 (90-148)||(5957150-5957208)
chr6 (100-171)||(34759253-34759326)
chr6 (6-42)||(10644016-10644052)
chr6 (6-42)||(30877898-30877934)
chr6 (1-64)||(7497073-7497136)
chr6 (11-74)||(29076543-29076606)
chr6 (11-74)||(29111516-29111579)
chr6 (8-73)||(3848200-3848265)
[»] chr4 (90 HSPs)
chr4 (1-169)||(5441296-5441464)
chr4 (1-169)||(27767948-27768116)
chr4 (1-169)||(54341036-54341204)
chr4 (1-168)||(49834959-49835126)
chr4 (1-169)||(54853614-54853782)
chr4 (1-169)||(30967445-30967613)
chr4 (1-169)||(51320813-51320981)
chr4 (1-169)||(29649813-29649981)
chr4 (9-171)||(37915675-37915837)
chr4 (1-146)||(37828548-37828693)
chr4 (1-169)||(32321983-32322151)
chr4 (1-169)||(20021236-20021404)
chr4 (5-169)||(50018143-50018307)
chr4 (1-169)||(49501657-49501827)
chr4 (1-169)||(49507722-49507892)
chr4 (1-167)||(5799872-5800037)
chr4 (9-171)||(24131126-24131288)
chr4 (1-145)||(41725041-41725185)
chr4 (9-171)||(41881237-41881400)
chr4 (9-171)||(22201905-22202067)
chr4 (88-169)||(23987148-23987229)
chr4 (9-171)||(28541588-28541750)
chr4 (9-146)||(25331046-25331183)
chr4 (14-167)||(29855576-29855728)
chr4 (1-121)||(37915767-37915887)
chr4 (13-171)||(40537303-40537461)
chr4 (1-167)||(12913117-12913284)
chr4 (9-148)||(32950990-32951129)
chr4 (9-171)||(39479511-39479673)
chr4 (9-156)||(55302748-55302895)
chr4 (1-74)||(23987201-23987274)
chr4 (17-170)||(31314890-31315043)
chr4 (9-173)||(46635796-46635961)
chr4 (9-171)||(1044700-1044859)
chr4 (13-148)||(34228741-34228875)
chr4 (1-74)||(44770999-44771073)
chr4 (1-74)||(9163063-9163136)
chr4 (1-74)||(32684133-32684206)
chr4 (1-74)||(36479377-36479450)
chr4 (9-171)||(37046606-37046768)
chr4 (1-146)||(19741054-19741198)
chr4 (9-156)||(7007278-7007426)
chr4 (90-161)||(28483883-28483954)
chr4 (9-147)||(25504793-25504931)
chr4 (9-171)||(30009831-30009993)
chr4 (97-161)||(32684187-32684251)
chr4 (9-146)||(1112807-1112945)
chr4 (1-74)||(28370911-28370984)
chr4 (100-168)||(28370859-28370927)
chr4 (9-171)||(7249926-7250089)
chr4 (13-74)||(12112932-12112993)
chr4 (116-169)||(34141627-34141680)
chr4 (2-74)||(11090336-11090408)
chr4 (6-74)||(37915730-37915798)
chr4 (18-146)||(39307374-39307502)
chr4 (1-64)||(39307399-39307462)
chr4 (90-171)||(28100584-28100666)
chr4 (100-146)||(36728057-36728103)
chr4 (89-171)||(41761980-41762062)
chr4 (100-169)||(11090283-11090352)
chr4 (100-145)||(36479434-36479478)
chr4 (90-171)||(38230773-38230854)
chr4 (97-145)||(467799-467847)
chr4 (85-169)||(24736336-24736419)
chr4 (100-156)||(25445998-25446054)
chr4 (1-37)||(28483923-28483959)
chr4 (100-171)||(42786657-42786729)
chr4 (90-146)||(44646747-44646803)
chr4 (90-170)||(53271911-53271991)
chr4 (90-169)||(28847104-28847183)
chr4 (9-169)||(23464845-23465007)
chr4 (9-74)||(40537341-40537406)
chr4 (97-145)||(543888-543936)
chr4 (6-42)||(40143822-40143858)
chr4 (1-73)||(53275827-53275899)
chr4 (6-42)||(54509760-54509796)
chr4 (100-147)||(8584017-8584064)
chr4 (100-171)||(16653255-16653326)
chr4 (9-64)||(25446048-25446102)
chr4 (97-156)||(47301329-47301388)
chr4 (100-146)||(16018929-16018975)
chr4 (9-51)||(41320788-41320830)
chr4 (100-138)||(44771057-44771095)
chr4 (6-39)||(28100584-28100617)
chr4 (5-58)||(41581938-41581991)
chr4 (17-74)||(42786713-42786770)
chr4 (100-145)||(53594113-53594158)
chr4 (6-42)||(26336123-26336159)
chr4 (6-50)||(41762017-41762061)
chr4 (6-42)||(47685190-47685226)
[»] chr3 (91 HSPs)
chr3 (1-169)||(36674276-36674444)
chr3 (1-167)||(44906659-44906825)
chr3 (1-169)||(10660427-10660595)
chr3 (1-171)||(18749460-18749630)
chr3 (1-162)||(54628742-54628903)
chr3 (1-169)||(23753532-23753700)
chr3 (1-169)||(52618111-52618279)
chr3 (3-169)||(50762198-50762364)
chr3 (1-169)||(11431418-11431586)
chr3 (1-161)||(31646430-31646590)
chr3 (1-169)||(40897035-40897204)
chr3 (1-161)||(50903389-50903549)
chr3 (20-169)||(27240408-27240557)
chr3 (1-169)||(51737872-51738039)
chr3 (1-169)||(48379050-48379217)
chr3 (1-169)||(20832887-20833052)
chr3 (1-171)||(6035199-6035368)
chr3 (1-169)||(26107153-26107321)
chr3 (9-148)||(35337648-35337787)
chr3 (1-146)||(12103545-12103689)
chr3 (9-148)||(19253740-19253879)
chr3 (1-167)||(6975643-6975808)
chr3 (82-169)||(39842656-39842743)
chr3 (1-74)||(10728787-10728860)
chr3 (9-171)||(20498100-20498261)
chr3 (1-74)||(34484176-34484249)
chr3 (11-148)||(37820633-37820770)
chr3 (11-171)||(996242-996401)
chr3 (1-64)||(39038037-39038100)
chr3 (9-148)||(44762191-44762330)
chr3 (1-74)||(17946275-17946348)
chr3 (1-121)||(44276329-44276449)
chr3 (1-64)||(52810375-52810438)
chr3 (9-148)||(10139300-10139439)
chr3 (9-171)||(29449012-29449176)
chr3 (1-64)||(37454858-37454921)
chr3 (17-169)||(52810312-52810464)
chr3 (100-169)||(10728844-10728913)
chr3 (9-169)||(6589455-6589616)
chr3 (1-56)||(15493006-15493061)
chr3 (100-169)||(17946223-17946291)
chr3 (1-74)||(25418353-25418426)
chr3 (1-145)||(52114446-52114588)
chr3 (9-169)||(29029898-29030058)
chr3 (1-64)||(32580174-32580236)
chr3 (9-148)||(33807953-33808095)
chr3 (100-171)||(38772267-38772338)
chr3 (9-146)||(1440106-1440242)
chr3 (9-171)||(3206359-3206512)
chr3 (9-74)||(3999799-3999864)
chr3 (9-146)||(51699633-51699770)
chr3 (100-171)||(12734085-12734156)
chr3 (9-64)||(33996695-33996750)
chr3 (9-63)||(53929282-53929336)
chr3 (100-169)||(539626-539695)
chr3 (9-171)||(40246734-40246896)
chr3 (90-171)||(45215403-45215484)
chr3 (85-169)||(15493961-15494045)
chr3 (17-146)||(27899301-27899430)
chr3 (1-171)||(55235077-55235245)
chr3 (9-64)||(6131325-6131380)
chr3 (90-148)||(10105016-10105074)
chr3 (90-148)||(10216163-10216221)
chr3 (90-148)||(10225792-10225850)
chr3 (113-169)||(50901199-50901255)
chr3 (100-159)||(2024109-2024168)
chr3 (90-145)||(10104895-10104950)
chr3 (90-145)||(10216042-10216097)
chr3 (90-145)||(10225671-10225726)
chr3 (1-64)||(18749609-18749672)
chr3 (9-74)||(27240439-27240504)
chr3 (90-147)||(28146261-28146318)
chr3 (110-171)||(45926971-45927032)
chr3 (1-37)||(539550-539586)
chr3 (104-148)||(10067700-10067744)
chr3 (100-171)||(22057653-22057725)
chr3 (6-42)||(27593198-27593234)
chr3 (6-42)||(36786017-36786053)
chr3 (100-171)||(19552160-19552231)
chr3 (100-171)||(50900459-50900530)
chr3 (9-124)||(6131367-6131481)
chr3 (9-74)||(2024152-2024217)
chr3 (17-74)||(6589593-6589650)
chr3 (6-39)||(10216163-10216196)
chr3 (6-39)||(10225671-10225704)
chr3 (100-169)||(32580068-32580136)
chr3 (17-74)||(37454890-37454947)
chr3 (106-147)||(46749276-46749317)
chr3 (9-74)||(54625579-54625644)
chr3 (20-64)||(539588-539632)
chr3 (6-42)||(39338299-39338335)
[»] chr1 (72 HSPs)
chr1 (1-169)||(49230772-49230940)
chr1 (1-162)||(46327935-46328096)
chr1 (1-169)||(15835199-15835367)
chr1 (1-162)||(18798384-18798545)
chr1 (1-169)||(6312460-6312628)
chr1 (1-161)||(8141274-8141434)
chr1 (1-169)||(25612043-25612211)
chr1 (1-169)||(5495242-5495410)
chr1 (1-169)||(29396534-29396702)
chr1 (1-167)||(28387539-28387705)
chr1 (1-169)||(29219174-29219340)
chr1 (1-169)||(9322646-9322814)
chr1 (1-169)||(45272473-45272640)
chr1 (1-169)||(48177608-48177776)
chr1 (1-143)||(51701494-51701634)
chr1 (1-169)||(9577578-9577746)
chr1 (9-171)||(953703-953865)
chr1 (9-176)||(35279551-35279718)
chr1 (9-171)||(730033-730194)
chr1 (9-171)||(28824526-28824688)
chr1 (14-167)||(48668931-48669084)
chr1 (11-147)||(22183278-22183414)
chr1 (9-145)||(50192705-50192841)
chr1 (9-156)||(35679282-35679429)
chr1 (9-171)||(21222032-21222193)
chr1 (3-74)||(38536237-38536308)
chr1 (3-74)||(38558455-38558526)
chr1 (9-171)||(45760163-45760326)
chr1 (86-167)||(42290732-42290813)
chr1 (11-171)||(19452006-19452166)
chr1 (16-171)||(49198429-49198583)
chr1 (100-161)||(38536292-38536353)
chr1 (100-161)||(38558510-38558571)
chr1 (9-121)||(19451962-19452074)
chr1 (17-121)||(47784363-47784466)
chr1 (27-142)||(14494122-14494237)
chr1 (13-170)||(47654510-47654669)
chr1 (91-171)||(42657715-42657795)
chr1 (82-145)||(25831133-25831196)
chr1 (17-147)||(6304415-6304546)
chr1 (90-171)||(27198272-27198353)
chr1 (9-146)||(49417993-49418130)
chr1 (90-170)||(51826838-51826918)
chr1 (90-148)||(19007581-19007639)
chr1 (9-74)||(19452046-19452111)
chr1 (9-148)||(29556015-29556150)
chr1 (13-143)||(33025424-33025554)
chr1 (9-74)||(47784368-47784433)
chr1 (90-171)||(48194591-48194672)
chr1 (90-171)||(48203349-48203430)
chr1 (100-171)||(19893452-19893523)
chr1 (11-74)||(49198466-49198528)
chr1 (102-148)||(31572410-31572456)
chr1 (6-43)||(10896845-10896882)
chr1 (13-74)||(37014798-37014859)
chr1 (9-74)||(45535925-45535990)
chr1 (100-145)||(47780529-47780574)
chr1 (9-74)||(47780692-47780757)
chr1 (6-42)||(1928406-1928442)
chr1 (6-42)||(36402293-36402329)
chr1 (11-73)||(14494149-14494211)
chr1 (13-71)||(45535886-45535944)
chr1 (6-64)||(48524268-48524326)
chr1 (90-147)||(14555313-14555370)
chr1 (17-74)||(21222170-21222227)
chr1 (110-171)||(42055114-42055175)
chr1 (90-171)||(43553537-43553618)
chr1 (6-42)||(29208801-29208837)
chr1 (17-73)||(32589073-32589129)
chr1 (6-42)||(33243312-33243348)
chr1 (6-42)||(33263485-33263521)
chr1 (7-39)||(42657763-42657795)
[»] scaffold0543 (1 HSPs)
scaffold0543 (1-169)||(10453-10621)
[»] chr5 (41 HSPs)
chr5 (1-169)||(4550402-4550570)
chr5 (1-169)||(4240597-4240765)
chr5 (1-169)||(14000250-14000418)
chr5 (1-169)||(37013807-37013975)
chr5 (1-169)||(22746190-22746358)
chr5 (1-169)||(1152248-1152416)
chr5 (1-162)||(5949009-5949170)
chr5 (3-162)||(13925831-13925990)
chr5 (1-169)||(40013847-40014012)
chr5 (1-107)||(1461283-1461389)
chr5 (9-171)||(21146958-21147120)
chr5 (9-171)||(33656194-33656358)
chr5 (1-62)||(7947718-7947779)
chr5 (82-169)||(7948543-7948630)
chr5 (10-145)||(32158052-32158188)
chr5 (9-148)||(6460706-6460845)
chr5 (1-144)||(139191-139334)
chr5 (11-170)||(5273116-5273276)
chr5 (17-171)||(7016858-7017012)
chr5 (9-147)||(27459102-27459240)
chr5 (1-170)||(9689553-9689719)
chr5 (2-124)||(14465373-14465494)
chr5 (102-171)||(27786211-27786280)
chr5 (100-171)||(28594454-28594526)
chr5 (9-74)||(5273072-5273137)
chr5 (9-126)||(9220860-9220977)
chr5 (90-148)||(26795635-26795693)
chr5 (100-171)||(43319137-43319209)
chr5 (100-147)||(1511596-1511643)
chr5 (100-171)||(9689348-9689419)
chr5 (90-145)||(26795514-26795569)
chr5 (90-145)||(26806578-26806633)
chr5 (90-148)||(26806699-26806757)
chr5 (9-74)||(7016892-7016957)
chr5 (100-147)||(17518453-17518500)
chr5 (28-74)||(9220837-9220883)
chr5 (1-35)||(39852372-39852406)
chr5 (6-39)||(26806578-26806611)
chr5 (9-73)||(16894055-16894119)
chr5 (100-148)||(16894104-16894151)
chr5 (6-42)||(17518474-17518510)
[»] chr7 (79 HSPs)
chr7 (1-162)||(23101192-23101353)
chr7 (1-169)||(28342234-28342402)
chr7 (1-169)||(29614909-29615077)
chr7 (1-169)||(33382524-33382692)
chr7 (1-169)||(39027984-39028152)
chr7 (3-150)||(37327833-37327980)
chr7 (1-169)||(9882381-9882549)
chr7 (1-169)||(17001168-17001336)
chr7 (1-169)||(39783986-39784154)
chr7 (3-169)||(41827201-41827367)
chr7 (1-169)||(7993029-7993197)
chr7 (9-169)||(48117746-48117906)
chr7 (2-169)||(18838276-18838443)
chr7 (1-167)||(46405576-46405742)
chr7 (1-151)||(40460852-40461002)
chr7 (1-162)||(19251433-19251594)
chr7 (1-163)||(12740266-12740428)
chr7 (3-169)||(12963589-12963754)
chr7 (1-162)||(28034950-28035111)
chr7 (1-169)||(32883668-32883837)
chr7 (1-161)||(3022821-3022981)
chr7 (1-175)||(44122045-44122220)
chr7 (1-145)||(3797202-3797346)
chr7 (1-147)||(10068375-10068522)
chr7 (1-169)||(33892395-33892564)
chr7 (1-167)||(44256911-44257077)
chr7 (17-169)||(509585-509737)
chr7 (9-171)||(44343549-44343711)
chr7 (9-148)||(47879083-47879222)
chr7 (9-148)||(47914181-47914320)
chr7 (9-171)||(30440688-30440850)
chr7 (82-169)||(21067769-21067856)
chr7 (9-145)||(43581243-43581379)
chr7 (9-148)||(18914888-18915027)
chr7 (1-74)||(509638-509711)
chr7 (11-148)||(34695146-34695283)
chr7 (9-171)||(973075-973238)
chr7 (1-63)||(8675326-8675388)
chr7 (9-171)||(12893300-12893462)
chr7 (100-169)||(29893010-29893079)
chr7 (1-74)||(29893063-29893136)
chr7 (82-169)||(37973000-37973087)
chr7 (9-170)||(20275416-20275577)
chr7 (6-64)||(29585507-29585565)
chr7 (9-171)||(40996802-40996965)
chr7 (31-146)||(43187518-43187633)
chr7 (1-71)||(44623421-44623491)
chr7 (100-169)||(47066631-47066701)
chr7 (13-147)||(727428-727562)
chr7 (9-146)||(7719413-7719551)
chr7 (29-162)||(10676551-10676684)
chr7 (13-171)||(34008907-34009062)
chr7 (9-171)||(8078287-8078450)
chr7 (13-74)||(47066685-47066746)
chr7 (9-146)||(31638792-31638929)
chr7 (1-171)||(9179768-9179935)
chr7 (9-121)||(34695215-34695327)
chr7 (90-171)||(3634214-3634295)
chr7 (1-73)||(10676565-10676637)
chr7 (100-146)||(29585467-29585513)
chr7 (9-174)||(32143072-32143238)
chr7 (9-74)||(34695178-34695243)
chr7 (100-145)||(39219579-39219624)
chr7 (90-154)||(21066800-21066864)
chr7 (1-73)||(25805675-25805747)
chr7 (16-74)||(43187545-43187603)
chr7 (97-171)||(47915066-47915140)
chr7 (1-49)||(10616955-10617003)
chr7 (90-146)||(34115475-34115531)
chr7 (6-42)||(40097140-40097176)
chr7 (90-146)||(42678196-42678252)
chr7 (100-156)||(48399743-48399799)
chr7 (1-64)||(1470377-1470440)
chr7 (100-169)||(43679363-43679433)
chr7 (100-156)||(9599077-9599134)
chr7 (100-156)||(9826648-9826705)
chr7 (11-64)||(34008969-34009022)
chr7 (6-42)||(39301247-39301283)
chr7 (90-150)||(46037352-46037412)
[»] scaffold1504 (1 HSPs)
scaffold1504 (1-169)||(756-924)
[»] scaffold0922 (1 HSPs)
scaffold0922 (1-169)||(4093-4261)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-156)||(39763-39918)
[»] scaffold0042 (2 HSPs)
scaffold0042 (82-169)||(58261-58348)
scaffold0042 (6-74)||(58228-58295)
[»] scaffold0347 (1 HSPs)
scaffold0347 (82-169)||(14788-14875)
[»] scaffold0306 (2 HSPs)
scaffold0306 (1-74)||(13870-13943)
scaffold0306 (100-169)||(13817-13886)
[»] scaffold0152 (2 HSPs)
scaffold0152 (1-74)||(21384-21457)
scaffold0152 (100-169)||(21441-21510)
[»] scaffold0010 (3 HSPs)
scaffold0010 (4-114)||(233685-233795)
scaffold0010 (4-114)||(234533-234643)
scaffold0010 (4-114)||(222517-222627)
[»] scaffold0037 (1 HSPs)
scaffold0037 (9-171)||(100102-100264)
[»] scaffold0400 (1 HSPs)
scaffold0400 (9-142)||(15187-15320)
[»] scaffold0365 (1 HSPs)
scaffold0365 (9-142)||(15830-15963)
[»] scaffold0054 (2 HSPs)
scaffold0054 (100-162)||(37068-37130)
scaffold0054 (17-74)||(37027-37084)
[»] scaffold0492 (2 HSPs)
scaffold0492 (112-169)||(12030-12087)
scaffold0492 (112-169)||(11999-12056)
[»] scaffold0651 (1 HSPs)
scaffold0651 (31-170)||(8654-8793)
[»] scaffold0276 (2 HSPs)
scaffold0276 (13-122)||(697-806)
scaffold0276 (11-74)||(737-800)
[»] scaffold0287 (1 HSPs)
scaffold0287 (90-171)||(11790-11871)
[»] scaffold0113 (2 HSPs)
scaffold0113 (100-147)||(39098-39145)
scaffold0113 (9-74)||(39049-39114)
[»] scaffold0151 (1 HSPs)
scaffold0151 (100-171)||(38765-38836)
[»] scaffold0007 (1 HSPs)
scaffold0007 (82-156)||(199730-199804)
[»] scaffold0004 (1 HSPs)
scaffold0004 (9-64)||(102091-102148)
[»] scaffold0472 (1 HSPs)
scaffold0472 (97-156)||(1894-1953)
[»] scaffold0016 (1 HSPs)
scaffold0016 (100-171)||(81794-81865)


Alignment Details
Target: chr2 (Bit Score: 124; Significance: 8e-64; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 28844617 - 28844449
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  28844617 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 28844518  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  28844517 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 28844449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 28740431 - 28740598
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  28740431 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagttttga 28740530  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatac 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  28740531 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaatac 28740598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 26788846 - 26788678
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  26788846 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 26788747  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  26788746 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 26788678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 215373 - 215541
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  215373 tgatgaaaagtcttgattgaatacctcaagactttttaaaattgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 215472  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  215473 ttgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 215541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 7026666 - 7026497
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  7026666 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 7026567  T
Q  101 ttgaataccacaagac-tttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  7026566 ttgaataccacaagacttttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 7026497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 33135685 - 33135517
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||       || ||||||||||| || |    
T  33135685 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaatactttttttaaattgcaaaaagtcttga 33135586  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  33135585 ttgaataccataagactttttcataattaaaaagtcttttaaaatcctatagaatcctaatccaataca 33135517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 3574909 - 3574748
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||| ||       |||||||||||||| || |    
T  3574909 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaattagtcttgattgaataccacaaaactttttttaagttgcaaaaagtcttga 3574810  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatc 162  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  3574809 ttgaataccacaaaactttttcataattaaaaagtcttttaaaattccatagaattctaatc 3574748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 3463734 - 3463565
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagt-cttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtatta 99  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| | | |||||       || ||||||||||| ||     
T  3463734 tgatgaaaagtcttgattgaacacctcaagacttttttaaaatgacaaagagttcttgattgaatattataagactttttttaaattgcaaaaagtcttg 3463635  T
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||||| ||||||    
T  3463634 attgaataccacaagattttttcataattaaaaagtcttttaaaatctcatagaatcataatccaataca 3463565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 13833570 - 13833738
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||  ||||||||       |||||||||||||| || |    
T  13833570 tgatgaaaagtcttgattgaatatatcaagacttttttaaaatgataaaaagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 13833669  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||| ||||||||||||||||||  |||||||||||| |||| |||||||||| ||||||    
T  13833670 ttgaataccacaatactttttcataattaaaatatcttttaaaatctcatagaatcctaatccaataca 13833738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 10657468 - 10657300
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||  ||||||||       ||||| |||||||  || |    
T  10657468 tgatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaaggatcttgattgaataccacaagactttttttaagtttcaaaaagccttga 10657369  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||| |||| ||||||    
T  10657368 ttgaataccacacgactttttcataactaaaaagtcatttaaaatcccatagaatccaaatccaataca 10657300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 16269745 - 16269578
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  16269745 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 16269646  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacctctta 176  Q
    ||||||||||||||||||| |||||||||||||||||||| || |||| | ||| |||||||| ||||    
T  16269645 cacaagactttttcataataaaaaagtcttttaaaatcccttagaatcatgatccaatacacccctta 16269578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 20605206 - 20605044
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  20605206 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 20605107  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| ||||||||||||||||||||||| || |||| | ||| ||||||||    
T  20605106 cacaagactttttcatgattaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 20605044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 22551911 - 22552081
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||||| | || |    
T  22551911 tgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaaaaatcttga 22552010  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  22552011 ttgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 22552081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6224696 - 6224864
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| |||       || ||||||||| | || |    
T  6224696 tgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattaaataccacatgactttttttaatttgcaaaaaatcttga 6224795  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    || |||||||||| ||||||||||||||||||||  |||||||||   ||| |||||||||| ||||||    
T  6224796 ttcaataccacaaaactttttcataattaaaaagctttttaaaattttatagaatcctaatctaataca 6224864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 44765829 - 44765664
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||| ||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  44765829 agtctcgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagttttgattgaatac 44765730  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacctct 174  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| |||||||||||    
T  44765729 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacctct 44765664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 24776409 - 24776247
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||  ||| ||| || |||||||||    
T  24776409 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattagaaagagtcttgattgaatac 24776310  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  24776309 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 24776247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 31170780 - 31170942
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || ||||||||     
T  31170780 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatat 31170879  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  31170880 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 31170942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 10125438 - 10125608
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaa--gacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtatt 98  Q
    ||||||||||| ||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||| ||       || ||||||| ||| ||    
T  10125438 tgatgaaaagttttgattgaatatctcaaaagacttttttaaaatgacaaagagtcttgattgaataccacaaaactttttttaaattgcaaagagtctt 10125537  T
Q  99 aattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
     |||||||  ||| ||||||||||||||||||||| |||||||||||| | || ||| |||||| ||||||    
T  10125538 gattgaatgtcacgagactttttcataattaaaaaatcttttaaaatctcttagaattctaatcgaataca 10125608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 32125304 - 32125157
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| || ||||||||| |||||||||||| | ||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  32125304 agtcttgattgaataccacatgactttttttaaatgacaaagaattttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatac 32125205  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatc 156  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||    
T  32125204 cacaagactttttcattataaaaaagtcttttaaaatcccttaaaatc 32125157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 379011 - 378873
Alignment:
Q  31 acttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagactttttcataattaa 130  Q
    |||||||| |||||| ||| ||| ||||||||||  ||||||||       |||||||||||||| || |||||||||||||||||||||||||||||||    
T  379011 actttttttaaatgagaaaaagttttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagactttttcataattaa 378912  T
Q  131 aaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||| || |||| | ||| ||||||    
T  378911 aaagtcttttaaaatcccttataatcatgatccaataca 378873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 174 - 264
Target Start/End: Original strand, 27313511 - 27313599
Alignment:
Q  174 ttactctatttccaactaaatactactattacagtctaaaagtcaaaataagatttaaataatatag-ggtgttcctattttaataatattt 264  Q
    ||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27313511 ttactctatttccaactaaatactattat---agtctaaaagtcaaaataagatttaaataatatagtggtgttcctattttaataatattt 27313599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18177329 - 18177266
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18177329 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 18177266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 12407434 - 12407272
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||| ||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| | | || |||||||||    
T  12407434 agtctcgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaaattgaaaagaatcttgattgaatac 12407335  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||| | || |||| | ||| ||||||||    
T  12407334 cacaagactttttcatgataaaaaagtcttttaaaatctcttagaatcatgatccaatacacc 12407272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 14198733 - 14198894
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| | ||||||||||  ||||||||       || | | ||| ||| || |||||||||    
T  14198733 agtcttgattgaataccacaagactttttttaaatgacaaagaattttgattgaataacacaagacttttttaaattag-aaagagtcttgattgaatac 14198831  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  14198832 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 14198894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25288221 - 25288158
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25288221 tgatgaaaagtcttgaatgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 25288158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 43078638 - 43078569
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||    
T  43078638 attgaataccacaagactttttcataatcaaaaagtcttttaaaatcccatagaatcctaatccaataca 43078569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 35317116 - 35316977
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    |||||||||||||||   |||||||||||| |||||||||||| ||||||||||||  ||||| ||       || ||| ||| ||| || |||||||||    
T  35317116 agtcttgattgaatattacaagactttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaatac 35317017  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||||||||| || ||||||| ||||||||||||    
T  35317016 cacaagactttttcatgataaaaaagttttttaaaatccc 35316977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 43847700 - 43847561
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| ||  ||||||||    
T  43847700 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagttttgcttgaatac 43847601  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
     | ||||||||||||  || ||||||||||||||||||||    
T  43847600 tagaagactttttcacgataaaaaagtcttttaaaatccc 43847561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 26601356 - 26601494
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||| |||  ||||| ||       || ||  ||| ||| || |||||||||    
T  26601356 agtcttgattgaatactacaagacttttttttaatgacaaagagtcttgattaaataacacaaaactttttttaaattagaaagagttttgattgaatac 26601455  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  26601456 cacaagactttttaataataaaaaagtcttttaaaatcc 26601494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 305621 - 305785
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac-nnnnnnnaagttgcaaaaagtattaattgaata 107  Q
    ||||||||||||||||| |||||||||||| |||||||||| | ||||||||||||  ||||||||        || ||| ||| ||| || ||||||||    
T  305621 agtcttgattgaataccacaagacttttttcaaatgacaaataatcttgattgaataacacaagacttttttttaaattggaaagagtcttgattgaata 305720  T
Q  108 ccacaagactttttcataat-taaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||| ||  |||||||||||||||||| | || |||| | ||| ||||||||    
T  305721 ccacaagactttttcatgataaaaaaagtcttttaaaatcgcttagaatcatgatccaatacacc 305785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 20605290 - 20605178
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  20605290 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 20605191  T
Q  109 cacaagacttttt 121  Q
    |||||||||||||    
T  20605190 cacaagacttttt 20605178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 1789492 - 1789334
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccaca 112  Q
    ||||||||||| |  ||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||||||    
T  1789492 ttgattgaatatcataagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagttttgattgaataccaca 1789393  T
Q  113 agactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||| || || ||||| |||||||||||| | || |||| | ||| ||||||||    
T  1789392 agacttttttatgataaaaaaatcttttaaaatctcttagaatcatgatccaatacacc 1789334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 5093204 - 5093268
Alignment:
Q  10 gtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||    
T  5093204 gtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagac 5093268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 43825147 - 43825085
Alignment:
Q  107 accacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| |||| ||||| ||||||    
T  43825147 accacaagactttttcataattaaaaaatcttttaaaatctcatagaatcataatccaataca 43825085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 3858188 - 3858269
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| || ||||||||||| || | ||||| || ||||||||||||||||||||||| ||||||| ||||  ||||||||    
T  3858188 aaaagtcttgattgaataccaaaaaagttttttatcattaaaaagtcttttaaaatcccttaaaatcttaattcaatacacc 3858269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 18176471 - 18176552
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| || |||||||||||||||| ||||| || |||||||| |||||||||||||| | ||||| ||||  ||||||||    
T  18176471 aaaagtcttgattgaataccacaagatttttttattattaaaaaatcttttaaaatcccttcaaatcttaattcaatacacc 18176552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 171
Target Start/End: Complemental strand, 19145082 - 19144916
Alignment:
Q  7 aaagtcttgattgaatacctcaagacttttttaaaatgacaaagagt---cttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattg 103  Q
    ||||||||||||||||||| |||| ||||||| |||||| |||||||   |||||||||||  |||||||        || ||| ||  ||| || ||||    
T  19145082 aaagtcttgattgaataccacaagtctttttttaaatgataaagagtactcttgattgaataccacaagattttttttaa-ttgaaatgagttttgattg 19144984  T
Q  104 aataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||||| || || ||||| | |||||||||||| || |||| || || ||||||||    
T  19144983 aataccacaagacttttttatgataaaaaaatattttaaaatcccttagaatcatattccaatacacc 19144916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 9120131 - 9120060
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||| || |||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  9120131 attgaataccacatgattttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 9120060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 39698609 - 39698680
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| | ||| ||| ||||||||| |||||||||| | | ||||||||||| ||||||||    
T  39698609 attgaataccacaagattgttttatagttaaaaagttttttaaaatctcttgaaatcctaatcgaatacacc 39698680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 9120178 - 9120125
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||||| | |||||||||||||||||   ||||||||||||||||||    
T  9120178 tcttgattgaataacacaagacttttttaaaattggaaagagtcttgattgaat 9120125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 378994 - 378926
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||||| ||||||||||||| |||||||||||| || |  |||| ||||||||||||||  ||||||||    
T  378994 aaaagttttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagac 378926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 11534917 - 11534881
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| |||||||||||||||    
T  11534917 aaaagtcttgattgaatacctaaagacttttttaaaa 11534881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 34028935 - 34028971
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| |||||||||||||||    
T  34028935 aaaagtcttgattgaatacctaaagacttttttaaaa 34028971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 2288541 - 2288485
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||| || |||||||||||| ||||||||  ||||| ||||||||||||||||||||    
T  2288541 aaaagtcttgattgaataccactagactttt--ataataaaaaagtcttttaaaatccc 2288485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 5093247 - 5093309
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaaga 73  Q
    ||||||||||||| | |||||||||||| ||||   ||||||||||||||||||  |||||||    
T  5093247 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaaga 5093309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 21987373 - 21987316
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||| || ||||||||| |||  |||||||||| || |||||||||||||||||||    
T  21987373 aaaagttttgattgaatactacataactttttcatcataaaaaagtcttttaaaatcc 21987316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 42863156 - 42863107
Alignment:
Q  97 ttaattgaataccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    |||||| |||||||| ||||||||| ||  ||||||||||||||||||||    
T  42863156 ttaatttaataccacgagacttttttatttttaaaaagtcttttaaaatc 42863107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 20157759 - 20157795
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  20157759 aaaagtcttgattgaatacctaaagacttctttaaaa 20157795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 24193631 - 24193595
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  24193631 aaaaatcttgattgaataccccaagacttttttaaaa 24193595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 14782280 - 14782448
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  14782280 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 14782379  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  14782380 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 14782448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 44725955 - 44726123
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  44725955 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 44726054  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  44726055 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 44726123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 7466395 - 7466228
Alignment:
Q  2 gatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || ||    
T  7466395 gatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgat 7466296  T
Q  102 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| ||||||    
T  7466295 tgaataccacaagactttttcataattaaaaaatcttttaaaatctcatagaatcctaatccaataca 7466228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 16362255 - 16362089
Alignment:
Q  3 atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaatt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||        ||||| |||||||| || |||    
T  16362255 atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatatcacaagattttttttaagttacaaaaagtcttgatt 16362156  T
Q  103 gaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  16362155 gaataccacaaaactttttcataattaaaaagtcttttaaaatcccatagaatcctaatctaataca 16362089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 4031405 - 4031571
Alignment:
Q  3 atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaatt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||       || ||||||||||| || ||     
T  4031405 atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagattcttgattgaataccacaagactttttttaaattgcaaaaagtcttgatc 4031504  T
Q  103 gaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  4031505 gaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 4031571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 39467613 - 39467778
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||| ||||||| || |    
T  39467613 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagac-ttttttaagttgtaaaaagtcttga 39467711  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaata 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  39467712 ttgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaata 39467778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 10295526 - 10295694
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||| || |||||       |||||||||||||| || |    
T  10295526 tgatgaaaagtcttgattgaatacctcaagactttttttaagtgacgaagagtcttgattgaatgccagaagacttttcttaagttgcaaaaagtcttga 10295625  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  10295626 ttgaataccacaagactttttcataattaaaaactcttttaaaatcccatagaatcctaatccaataca 10295694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 18306106 - 18306266
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  18306106 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 18306205  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaat 161  Q
    ||||||||||||||||||||||||||||||||| |||| |||||| ||||| |||||||||    
T  18306206 ttgaataccacaagactttttcataattaaaaaatcttctaaaattccatagaatcctaat 18306266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 18958872 - 18959040
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  18958872 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgataaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 18958971  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  18958972 ttgaatactacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 18959040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 19718026 - 19718194
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  19718026 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 19718125  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||| || ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  19718126 ttgaataccgcaggactttttcataattaaaaggtcttttaaaatcccatagaatcctaatccaataca 19718194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 42305930 - 42306098
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||| | || |    
T  42305930 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaattcttga 42306029  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  42306030 ttgaatatcacaagactttttcataattaaaaagtcttttaaaatcacatagaatcctaatccaataca 42306098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 31623756 - 31623588
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||       ||||| |||||||| || |    
T  31623756 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccaagagactttttttaagttacaaaaagtcttga 31623657  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||||||    
T  31623656 ttgaatgccacaagactttttcataattaaaaaatcttttaaaattccatagaatcctaatccaataca 31623588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 169
Target Start/End: Original strand, 43166809 - 43166961
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagac 116  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |||||||||||||||||    
T  43166809 ttgaataccacaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagac 43166908  T
Q  117 tttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||| ||||||    
T  43166909 tttttcttaattaaaaagtattttaaaatcccataaaatcttaatccaataca 43166961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 26856128 - 26855961
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaa-gacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtatta 99  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |        |||||||||||||| ||     
T  26856128 tgatgaaaagtcttgattgaatacctcaaagacttttttaaaatgacaaagagtcttgattgaataccacaatattttttttaagttgcaaaaagtcttg 26856029  T
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||| |||| |||||||||| ||||||    
T  26856028 attgaataccacaaaactttttcataatt--aaagtcttttaaaatctcatagaatcctaatccaataca 26855961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4403168 - 4403000
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| |||| ||||||||| |||||| ||||||||||||| || |||||||||||||||  ||||||||       |||||||||||||| || |    
T  4403168 tgatgaaaaatcttaattgaatacttcaagatttttttaaaatgaaaatgagtcttgattgaataccacaagactttttttaagttgcaaaaagttttga 4403069  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| |||| |||| ||||| ||||||    
T  4403068 ttgaataccaaaagactttttcacaattaaaaagtcttttaaaatctcatataatcataatccaataca 4403000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 9288602 - 9288763
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||       || ||||||||||| ||      
T  9288602 tgatgaaaatttttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatatcacaagactttttttaaattgcaaaaagtctt-- 9288699  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
          |||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||    
T  9288700 -----gaccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcataatccaataca 9288763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 32497532 - 32497376
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccaca 112  Q
    ||||||||||||| ||||| |||||| || |  |||| ||||||||||||||  ||||||||       |||||| ||||||| || |||||||||||||    
T  32497532 ttgattgaataccacaagattttttttaagttgcaaaaagtcttgattgaataccacaagactttttttaagttgtaaaaagtcttgattgaataccaca 32497433  T
Q  113 agactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  32497432 agactttttcatgattaaaaagtcttttaaaatcccatagaatcctaatccaataca 32497376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 32497586 - 32497466
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||        |||||||||||||| || |    
T  32497586 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtattgattgaataccacaagattttttttaagttgcaaaaagtcttga 32497487  T
Q  101 ttgaataccacaagacttttt 121  Q
    |||||||||||||||||||||    
T  32497486 ttgaataccacaagacttttt 32497466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 23115321 - 23115483
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||| ||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  23115321 agtcttgattgaataccacaagacattttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 23115420  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  23115421 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 23115483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 41479150 - 41478989
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||| ||       || ||| ||| ||| || |||||||||    
T  41479150 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaatac 41479051  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacac 170  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| |||||||    
T  41479050 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacac 41478989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 2704972 - 2705110
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  2704972 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaatttggaaagagtcttgattgaatac 2705071  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||||||||||||| || ||||| |||||||||||||    
T  2705072 cacaagactttttcatgataaaaaaatcttttaaaatcc 2705110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 5576774 - 5576936
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  5576774 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 5576873  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||| |||||| |  ||||| |||||||||||||| || |||| ||||| ||||||||    
T  5576874 cacaagactatttcatgacaaaaaaatcttttaaaatcccttagaatcataatccaatacacc 5576936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 42938270 - 42938416
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||| | ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  42938270 agtcttgattgaataccacaagactttttttaaatgacaaataatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatac 42938369  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaat 155  Q
    ||||||||||||||||  | |||||||||||||||||||| ||||||    
T  42938370 cacaagactttttcatggtaaaaaagtcttttaaaatcccttaaaat 42938416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 170
Target Start/End: Complemental strand, 43959708 - 43959549
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatacca 110  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||||    
T  43959708 tcttgattgaataca-caagacttttttaaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatacca 43959610  T
Q  111 caagactttttcataattaaaaa-gtcttttaaaatcccataaaatcctaatcaaatacac 170  Q
    |||||||||||||| || ||||| ||||||||||||||  ||||||| | |||||||||||    
T  43959609 caagactttttcatgataaaaaaagtcttttaaaatcctttaaaatcatgatcaaatacac 43959549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 32711435 - 32711569
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  32711435 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatac 32711534  T
Q  109 cacaagactttttcataattaaaaagtcttttaaa 143  Q
    ||||| |||||||||| || |||||||||||||||    
T  32711535 cacaaaactttttcatgataaaaaagtcttttaaa 32711569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 42735430 - 42735592
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    |||||| |||||||||| |||| ||||||| |||||| ||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  42735430 agtcttaattgaataccacaagtctttttttaaatgataaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 42735529  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  42735530 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 42735592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 26374583 - 26374741
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||  ||       || ||| ||| ||| || ||||||||     
T  26374583 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacaca--actttttttaaattggaaagagtcttgattgaatat 26374680  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||    
T  26374681 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaataca 26374741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 43308523 - 43308592
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  43308523 attgaataccagaagactttttcataattaaaaagtcttttaaaattccatagaatcctaatccaataca 43308592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 7507052 - 7507214
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||| | ||||||||| || ||| ||||||||  |||||          || ||| ||| ||| || |||||||||    
T  7507052 agtcttgattgaataccacaagacttttcttaaatgacaaggaatctcgattgaataacacaaacttttttttaaattggaaagagtcttgattgaatac 7507151  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  7507152 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 7507214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 39189944 - 39190084
Alignment:
Q  29 agacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagactttttcataatt 128  Q
    |||||||||| |||||| ||||||| || |||||||  ||||||||       || ||||||| ||| || |||||||||||||| |    |||||||||    
T  39189944 agactttttttaaatgataaagagtttttattgaataccacaagactttttttaaattgcaaagagtcttgattgaataccacaaaaaaaattcataatt 39190043  T
Q  129 aaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||||| || |||||||||| ||||||    
T  39190044 aaaaagtcttttaaaatcccttagaatcctaatccaataca 39190084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 42937322 - 42937251
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||| | ||| ||||||||    
T  42937322 attgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttaaaatcatgatccaatacacc 42937251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 37857168 - 37857098
Alignment:
Q  97 ttaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaata 167  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||||| |||||| |||||| ||||    
T  37857168 ttaattgaatacctcaaaactttttcataattaaaaaatcttttaaaatcccgtaaaattctaatccaata 37857098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10392382 - 10392445
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    |||| |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||||||    
T  10392382 tgattaaaagtcttgattgaatatcacaagaattttttaaaatgacaaagaatcttgattgaat 10392445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 24501966 - 24502031
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||| |||||||||||| |||||| ||||| ||||||||||||  ||||||||    
T  24501966 agtcttgattgaataccacaagactttttttaaatgataaagaatcttgattgaataacacaagac 24502031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 9770962 - 9771128
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||| |||||||||||||||||||  |  ||||||||| |||||| ||||| ||||||||||||   |||| ||       |||||||||| |||||| |    
T  9770962 tgataaaaagtcttgattgaatacaacgtgactttttttaaatgagaaagattcttgattgaataaaacaaaactttttttaagttgcaaagagtattga 9771061  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||  |||||  ||||||||| ||  |||| | |||||||||||| ||||||| ||||| ||||||    
T  9771062 ttgaatgacacaatgctttttcatgat--aaaaatattttaaaatcccttaaaatcttaatccaataca 9771128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 26373767 - 26373719
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  26373767 attgaataccacaagactttttcatgataaaaaagtcttttaaaatccc 26373719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 43166843 - 43166908
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||| |||||||||||| ||||  |||| ||||||||||||||  ||||||||    
T  43166843 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaataccacaagac 43166908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 14061618 - 14061542
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacctctta 176  Q
    |||||||||||||||||||||| |   | ||||||||||||||||| ||||||||||| |||  |||||||| ||||    
T  14061618 attgaataccacaagacttttttactttaaaaaagtcttttaaaattccataaaatcccaatacaatacacccctta 14061542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 24214835 - 24214911
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacctctta 176  Q
    |||||||||||||||||||||| || || |||||||||||||||||||  || |||| | ||| |||||||| ||||    
T  24214835 attgaataccacaagacttttttatgataaaaaagtcttttaaaatcctttagaatcatgatccaatacacccctta 24214911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 24502015 - 24502062
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||||| |||||||||||||||| || |||||||||||||||||||    
T  24502015 attgaataacacaagactttttcatgataaaaaagtcttttaaaatcc 24502062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 35142114 - 35142043
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||||||||| | ||  |||||||||||||||||||  |||||||  |||| ||||||||    
T  35142114 attgaataccacaagacttttttaaaacgaaaaagtcttttaaaatccattaaaatctcaatccaatacacc 35142043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 42937400 - 42937341
Alignment:
Q  15 gattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||| |||||||||||| |||||||||| | ||||||||||||  ||||||||    
T  42937400 gattgaataccacaagactttttttaaatgacaaaaaatcttgattgaataacacaagac 42937341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 32497497 - 32497429
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||||||||||||||||||| |||||||||||| || |   ||| ||||||||||||||  ||||||||    
T  32497497 aaaagtcttgattgaataccacaagactttttttaagttgtaaaaagtcttgattgaataccacaagac 32497429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 39189973 - 39190021
Alignment:
Q  16 attgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    |||||||||| |||||||||||| ||||  |||||||||||||||||||    
T  39189973 attgaataccacaagactttttttaaattgcaaagagtcttgattgaat 39190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 29260288 - 29260359
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||||||||  | ||  |||||||||||||||||||  |||||||  |||| ||||||||    
T  29260288 attgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttaaaatctcaatccaatacacc 29260359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 4302813 - 4302846
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaa 42  Q
    |||||||||||||||||| |||||||||||||||    
T  4302813 agtcttgattgaatacctaaagacttttttaaaa 4302846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 8502706 - 8502657
Alignment:
Q  97 ttaattgaataccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    |||||| |||||||||||||||||| | ||  ||||||||||||||||||    
T  8502706 ttaattaaataccacaagacttttttaaaacgaaaaagtcttttaaaatc 8502657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 7148123 - 7148071
Alignment:
Q  95 tattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||| |||||||||||||||||||||  | ||  |||||||||||||||||||    
T  7148123 tattgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcc 7148071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 37567365 - 37567401
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  37567365 aaaagtcttaattgaatacctaaagacttttttaaaa 37567401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 34773469 - 34773301
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  34773469 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 34773370  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  34773369 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatataatcctaatccaataca 34773301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 31895756 - 31895588
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  31895756 tgatgaaaagtcttgattgaatacttcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 31895657  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  31895656 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 31895588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 14262578 - 14262746
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||       |||||||||||| | || |    
T  14262578 tgatgaaaaatcttgattgaatacctcaagactttttaaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaaatcttga 14262677  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  14262678 ttgaataccacaagattttttcataattaaaaagtcttttaaaatcccgtagaatcctaatccaataca 14262746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 2300891 - 2301053
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  2300891 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatac 2300990  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  2300991 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 2301053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7051905 - 7051735
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||| ||||||||||| ||||| |||||||||||| |||||||||||| ||||||| | ||  ||||||||       |||||||||| ||| || |    
T  7051905 tgatgaagagtcttgattgtataccacaagactttttttaaatgacaaagaatcttgatcgtataccacaagactttttttaagttgcaaagagtcttga 7051806  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||| |||||||||||||||| || |||||||||||||||||| | || ||||||||||||| |||||    
T  7051805 ttgaatatcacaagactttttcatgataaaaaagtcttttaaaatctcttagaatcctaatcaaacacacc 7051735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 6197631 - 6197793
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  6197631 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 6197730  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||| ||||||||||| || ||||||| |||||||||||| || |||| | ||| ||||||||    
T  6197731 cacacgactttttcatgataaaaaagttttttaaaatcccttagaatcatgatccaatacacc 6197793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 1391676 - 1391538
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| ||||||||| || ||||||||| || ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  1391676 agtcttgattgaataccacaagactttatttaaatgacaatgaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 1391577  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||||||||||||| || |||||||| ||||||||||    
T  1391576 cacaagactttttcatgataaaaaagtcatttaaaatcc 1391538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 7497162 - 7497010
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagac 116  Q
    ||||||||| |||||||||||| || |||  || | ||||||||||||  ||||||||       ||||||||| |||| || ||||||||||| || ||    
T  7497162 ttgaataccacaagactttttttaagtgatgaaaaatcttgattgaataccacaagactttttttaagttgcaacaagtcttgattgaataccagaatac 7497063  T
Q  117 tttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||| |||||||||||| |||| ||| |||||| ||||||    
T  7497062 tttttcataattaaaaaatcttttaaaatctcatagaattctaatccaataca 7497010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34759195 - 34759269
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagac-ttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  34759195 tgatgaaaagtcttgattgaatacttcaagactttttttaaaatgacaaagagtcttgattgaataccacaagac 34759269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30385202 - 30385275
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  30385202 tgatgaaaatttttgattgaatacctcaatacttttttaaaatgacaaagagtcttgattgaataccacaagac 30385275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 29076644 - 29076487
Alignment:
Q  15 gattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaag 114  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||| ||||||    
T  29076644 gattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttatttaaattggaaagagtcttgattgaatatcacaag 29076545  T
Q  115 actttttcataat-taaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||| ||  |||||||||||||||||| | || |||| | ||| ||||||||    
T  29076544 actttttcatgataaaaaaagtcttttaaaatctcttagaatcatgatccaatacacc 29076487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 29111617 - 29111460
Alignment:
Q  15 gattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaag 114  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||| ||||||    
T  29111617 gattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttatttaaattggaaagagtcttgattgaatatcacaag 29111518  T
Q  115 actttttcataat-taaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||| ||  |||||||||||||||||| | || |||| | ||| ||||||||    
T  29111517 actttttcatgataaaaaaagtcttttaaaatctcttagaatcatgatccaatacacc 29111460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 28002717 - 28002581
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    |||||||||||||||||  ||||||||||| |||||||||| | ||||||||||||   |||||||       || ||| ||| ||| || |||||||||    
T  28002717 agtcttgattgaataccagaagactttttttaaatgacaaaaaatcttgattgaataagacaagactttttttaaattggaaagagtcttgattgaatac 28002618  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaat 145  Q
     |||||| |||||||| || |||||||||||||||||    
T  28002617 gacaagattttttcattataaaaaagtcttttaaaat 28002581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 31609694 - 31609751
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||| || |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  31609694 aaaagtcttgattgaataccacaagatttttttataattaaaaagtcttttaaaatcc 31609751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 7100246 - 7100165
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| || |||||||||||| ||||||||||||  | |||||||||||||||||||| | |||||| |||  ||||||||    
T  7100246 aaaagtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatcccttgaaatcccaattcaatacacc 7100165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 8794384 - 8794465
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| || |||||||||||| ||||||||||||  | |||||||||||||||||||| | |||||| |||  ||||||||    
T  8794384 aaaagtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatcccttgaaatcccaattcaatacacc 8794465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 11007691 - 11007740
Alignment:
Q  97 ttaattgaataccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  11007691 ttaattaaataccacaagacttttttatatttaaaaagtcttttaaaatc 11007740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 657017 - 656963
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||||||||| |||||||||||| ||||| |||||| ||||||||||||    
T  657017 agtcttgattgaataccacaagactttttttaaatg-caaagaatcttgattgaat 656963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 708997 - 708939
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||| || |||||||||||| ||| |||||||| || ||||||||||||||||||||    
T  708997 aaaagttttgattgaataccactagattttttcattataaaaaagtcttttaaaatccc 708939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 5957208 - 5957150
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||| || |||||||||||| ||||||||| || || ||||||||||||||||||||    
T  5957208 aaaagtcttgattgaataccactagacttttttattataaaaaagtcttttaaaatccc 5957150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 34759253 - 34759326
Alignment:
Q  100 attgaataccacaagactttttcataatt--aaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||||||||   | ||  |||||||||||||||||| |||| |||||||||| ||||||||    
T  34759253 attgaataccacaagactttttttaagttgcaaaaagtcttttaaaatctcatagaatcctaatccaatacacc 34759326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 10644016 - 10644052
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| |||||||||||||||    
T  10644016 aaaagtcttgattgaatacctaaagacttttttaaaa 10644052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 30877934 - 30877898
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| |||||||||||||||    
T  30877934 aaaagtcttgattgaatacctaaagacttttttaaaa 30877898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7497136 - 7497073
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||| ||||||||||||||| |||||||||||| || |  |||  ||||||||||||||    
T  7497136 tgatgaaaaatcttgattgaataccacaagactttttttaagttgcaacaagtcttgattgaat 7497073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 29076606 - 29076543
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||| | ||||||||| || ||||   |||||||||||||||||| |||||||||    
T  29076606 tcttgattgaataacacaagactttatttaaattggaaagagtcttgattgaatatcacaagac 29076543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 29111579 - 29111516
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||| | ||||||||| || ||||   |||||||||||||||||| |||||||||    
T  29111579 tcttgattgaataacacaagactttatttaaattggaaagagtcttgattgaatatcacaagac 29111516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 3848265 - 3848200
Alignment:
Q  8 aagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaaga 73  Q
    ||||||||||||| |||| ||| |||| ||| |||||||||| ||| ||||||||||  |||||||    
T  3848265 aagtcttgattgattaccacaatacttgttttaaatgacaaaaagttttgattgaataccacaaga 3848200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 5441464 - 5441296
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  5441464 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 5441365  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  5441364 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 5441296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 27768116 - 27767948
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||| | || |    
T  27768116 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaaatcttga 27768017  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  27768016 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 27767948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 54341204 - 54341036
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||       || ||||||||||| || |    
T  54341204 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccataagactttttttaaattgcaaaaagtcttga 54341105  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  54341104 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 54341036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 49834959 - 49835126
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  49834959 tgatgaaaagtcttgattgaatacctcaagcctttgttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagttttga 49835058  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatac 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  49835059 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaatac 49835126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 54853614 - 54853782
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  54853614 tgatgaaaagtcttgattgaatacttcaagacttttttaaaatgaaaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 54853713  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||    
T  54853714 ttgaataccacaagactttttcgtaattaaaaagtcttttaaaattccataaaatcctaatccaataca 54853782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 30967445 - 30967613
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  30967445 tgatgaaaaatcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 30967544  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  30967545 ttgaataccacaagactttttcataattaaaaaatcttttaaaatcccataaaatcataatccaataca 30967613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 51320981 - 51320813
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||       |||||||||||||| || |    
T  51320981 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaaactttttttaagttgcaaaaagtcttga 51320882  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||| | ||||||||||||||||||||||||||||| || || |||||||||| ||||||    
T  51320881 ttgaataccacaaaattttttcataattaaaaagtcttttaaaattccgtagaatcctaatccaataca 51320813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29649813 - 29649981
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  |||  ||||||||       || ||||||||||| || |    
T  29649813 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagttttaatctaataccacaagactttttttaaattgcaaaaagtcttga 29649912  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  29649913 ttgaataccacaaaactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 29649981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 37915837 - 37915675
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| || ||||||| ||||||||||||||  ||||||||       ||||| |||||||| || |||||||||    
T  37915837 agtcttgattgaataccacaagactttttttaagtgacaaaaagtcttgattgaataccacaagactttttttaagttacaaaaagtcttgattgaatac 37915738  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  37915737 cacaagactttttcataattaaaaagtcttttaaaatcccatagaatcataatccaatacacc 37915675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 37828548 - 37828693
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||        || ||||||||||| || |    
T  37828548 tgatgaaaaatcttgattgaatacctcaagactttttaaaaatgacaaagagtcttgattgaataccacaagattttttttaatttgcaaaaagtcttga 37828647  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  37828648 ttgaataccacaagactttttcataattaaaaagtcttttaaaatc 37828693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 32322151 - 32321983
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||       ||||| |||||| | || |    
T  32322151 tgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattaaatatcacatgactttttttaagttacaaaaaatcttga 32322052  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||  ||| |||||||||| ||||||    
T  32322051 ttgaataccacaaaactttttcataattaaaaagtcttttaaattctgatagaatcctaatccaataca 32321983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 20021404 - 20021236
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||  ||||| ||       || ||||||| ||| || |    
T  20021404 tgatgaaaagtcttgattgaatacttcaagatttttttaaaatgacaaagaatcttgattgaataccacaaaactttttttaaattgcaaagagtcttga 20021305  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| ||||||    
T  20021304 ttaaataccacaagactttttcataattaaaaagtcttttaaaatcccttaaaattataatccaataca 20021236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 50018307 - 50018143
Alignment:
Q  5 gaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattga 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  || |||||       || ||| ||||||| || |||||    
T  50018307 gaaaagtcttgatggaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccataagactttttttaaattgtaaaaagtcttgattga 50018208  T
Q  105 ataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||| ||| |||||| ||||||    
T  50018207 ataccacaagacttttttataattaaaaaatattttaaaatcccatagaattctaatccaataca 50018143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 49501657 - 49501827
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnn-aagttgcaaaaagtatta 99  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    ||||||        || || |||||||| |||    
T  49501657 tgatgaaaagtcttgattgaatacctcaagatttatttaaaatgacaaagagtcttgattgaatactgcaagacttttttttaaattacaaaaagtctta 49501756  T
Q  100 -attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
     ||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  49501757 gattcaataccacaagactttttcataattaaaaaatcttttaaaatcccatagaatcctaatcaaataca 49501827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 49507722 - 49507892
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnn-aagttgcaaaaagtatta 99  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    ||||||        || || |||||||| |||    
T  49507722 tgatgaaaagtcttgattgaatacctcaagatttatttaaaatgacaaagagtcttgattgaatactgcaagacttttttttaaattacaaaaagtctta 49507821  T
Q  100 -attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
     ||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  49507822 gattcaataccacaagactttttcataattaaaaaatcttttaaaatcccatagaatcctaatcaaataca 49507892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 5800037 - 5799872
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||| |||||  ||||| ||||   ||||||||||||||||||||||||||||||||  ||||| ||       |||||||||||||| ||||    
T  5800037 tgatgaaaagttttgatgaaatacatcaaattttttttaaaatgacaaagagtcttgattgaataccacaaaactttttttaagttgcaaaaagtcttaa 5799938  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaata 167  Q
    || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  5799937 tttaataccacaaaactttt-cataattaaaaagtcttttaaaatcccataaaatcctaatctaata 5799872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 24131126 - 24131288
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  24131126 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 24131225  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  24131226 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 24131288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 41725185 - 41725041
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||  ||||| |        |||||||||||| | || |    
T  41725185 tgatgaaaagtcttgattgcatacatcaagacttttttaaaatgacaaagagtattgattgaataccacaatattttttttaagttgcaaaaaatcttga 41725086  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||||    
T  41725085 ttgaatatcacaagacttttttataattaaaaaatcttttaaaat 41725041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 41881237 - 41881400
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  41881237 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaaattggaaagagtcttgattgaatac 41881336  T
Q  109 cacaagactttttcataat-taaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| ||  |||||||||||||||||||| ||||||| | ||| ||||||||    
T  41881337 cacaagactttttcatgataaaaaaagtcttttaaaatcccttaaaatcatgatccaatacacc 41881400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 22202067 - 22201905
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || ||||||||     
T  22202067 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatat 22201968  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  22201967 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 22201905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 23987229 - 23987148
Alignment:
Q  88 caaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23987229 caaagagtattgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatccaataca 23987148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 28541750 - 28541588
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| | |||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  28541750 agtcttgattgaataccacgagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatac 28541651  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||||| |||| ||||||||||||||| || |||| | ||| ||||||||    
T  28541650 cacaagactttttcataataaaaatgtcttttaaaatcccttagaatcatgatccaatacacc 28541588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 25331183 - 25331046
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  25331183 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 25331084  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    |||||||||||||||| || ||||||||||||||||||    
T  25331083 cacaagactttttcatgataaaaaagtcttttaaaatc 25331046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 29855728 - 29855576
Alignment:
Q  14 tgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaa 113  Q
    |||||||||||||||| | ||||||||||||||||| |||||||||| |||  ||||| ||       || ||||||||||| ||||||||||| |||||    
T  29855728 tgattgaatacctcaaaatttttttaaaatgacaaacagtcttgattaaata-cacaaaactttttttaaattgcaaaaagtcttaattgaatatcacaa 29855630  T
Q  114 gactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaata 167  Q
    ||||||||||||||| |||| ||||||||||| ||||| |||||||||| ||||    
T  29855629 gactttttcataatttaaaaatcttttaaaattccatagaatcctaatccaata 29855576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 37915887 - 37915767
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||  ||||||||       ||||  |||||||| || |    
T  37915887 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgatagagagtcttgattgaataccacaagactttttttaagtgacaaaaagtcttga 37915788  T
Q  101 ttgaataccacaagacttttt 121  Q
    |||||||||||||||||||||    
T  37915787 ttgaataccacaagacttttt 37915767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 40537303 - 40537461
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccaca 112  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||  ||||||||       || ||  ||| ||| ||||||||||||||||    
T  40537303 ttgattgaataccacaagactttttttaaatgacaaagagtcttgattgaataacacaagactttttttaaattagaaagagtcttaattgaataccaca 40537402  T
Q  113 agactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||| || ||  ||||||||||||||||||| || |||| | ||| ||||||||    
T  40537403 agacttttttatgatacaaaagtcttttaaaatcccttacaatcatgatccaatacacc 40537461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 12913284 - 12913117
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac-nnnnnnnaagttgcaaaaagtatta 99  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||||        || ||  ||| ||| ||     
T  12913284 tgatgaaaaagcttgattgaatacctcaagacttttttaaaatgacaaagagtcttaattaaataccacaagacttttttttaaattataaagagtcttg 12913185  T
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaata 167  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| | || | |||||||| ||||    
T  12913184 attgaataccacaagactttttcaaaattaaaaaatcttttaaaatctcttagattcctaatcgaata 12913117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 32950990 - 32951129
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| || ||||||||| |||||||||| | ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  32950990 agtcttgattgaataccacatgactttttttaaatgacaaataatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatac 32951089  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  32951090 cacaagactttttcattataaaaaagtcttttaaaatccc 32951129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 39479511 - 39479673
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| ||||||||| || ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  39479511 agtcttgattgaataccacaagactttttttaaatgacaaggaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatac 39479610  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||| || || |||||||||||||||||  | ||||||| | ||| ||||||||    
T  39479611 cacaagacttttttatgataaaaaagtcttttaaaatttcttaaaatcatgatccaatacacc 39479673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 55302895 - 55302748
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| || |||||||||||||||||||||| |||||||||||   ||||||||       || ||| ||| ||| || |||||||||    
T  55302895 agtcttgattgaataccacatgacttttttaaaatgacaaagaatcttgattgaaaaacacaagactttttttaaattgaaaagagtcttgattgaatac 55302796  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatc 156  Q
    || || |||||||||| || |||||||||| ||||||||| |||||||    
T  55302795 cataacactttttcattataaaaaagtcttctaaaatcccttaaaatc 55302748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23987274 - 23987201
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  23987274 tgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagtattgattgaataccacaagac 23987201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 31314890 - 31315043
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagac 116  Q
    ||||||||| |||||||||||| |||||||||||| |||||||| |||  ||||||||       || ||| ||||||| || |||||||||||||| ||    
T  31314890 ttgaataccacaagactttttttaaatgacaaagaatcttgattaaataacacaagactttttttaaattgaaaaaagtcttgattgaataccacaatac 31314989  T
Q  117 tttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacac 170  Q
    |||||||| || ||||| |||||||||||||| || |||| | ||| |||||||    
T  31314990 tttttcatgataaaaaaatcttttaaaatcccttagaatcatgatccaatacac 31315043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 46635796 - 46635961
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||   ||||||        || ||| ||| ||| || |||||||||    
T  46635796 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataatacaagattttttttaaattggaaagagtcttgattgaatac 46635895  T
Q  109 cacaagac-tttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacctc 173  Q
    |||||||| |||||||| || |||||||||||||||||| | || |||| | ||| ||||||||||    
T  46635896 cacaagacttttttcatgataaaaaagtcttttaaaatctcttagaatcatgatccaatacacctc 46635961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 1044859 - 1044700
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||  ||||||||| || ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  1044859 agtcttgattgaataccacaagacttttt--aaatgacaaggaatcttgattgaataacacaagacttttttaaa-ttggaaagagtcttgattgaatac 1044763  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || ||||| |||||||||||||| || |||| | ||| ||||||||    
T  1044762 cacaagactttttcatgataaaaaaatcttttaaaatcccttagaatcatgatccaatacacc 1044700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 34228741 - 34228875
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccaca 112  Q
    ||||||||||||| || ||||||||| |||||||||||| ||||||||||||  |||| |||       || ||| ||| ||| || |||||||||||||    
T  34228741 ttgattgaataccacatgactttttttaaatgacaaagaatcttgattgaataacaca-gactttttttaaattgaaaagagtcttgattgaataccaca 34228839  T
Q  113 agactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||||| || ||||||||||||||||||||    
T  34228840 agactttttcatgataaaaaagtcttttaaaatccc 34228875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44770999 - 44771073
Alignment:
Q  1 tgatgaaaagtcttgattgaat-acctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  44770999 tgatgaaaaatcttgattgaattacctcaagatttttttaaaatgacaaagagtcttgattgaatatcacaagac 44771073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9163136 - 9163063
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||  ||||||||    
T  9163136 tgatgaaaaatcttgattgaataccacaagactttttttaaatgacaaagagtcttgattgaataccacaagac 9163063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32684133 - 32684206
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||  ||||||||    
T  32684133 tgatgaaaagtcttgattgaatacctcaatacttttttaaaatgacaaagaatcttaattgaataccacaagac 32684206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36479377 - 36479450
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  36479377 tgatgaaaaatcttaattgaatacctcaagacttttttaaaatgacaaagagttttgattgaataccacaagac 36479450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 37046606 - 37046768
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  37046606 agtcttgattgaataccacaaaactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatac 37046705  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||| || || ||||  ||||||||||| || || |||| | ||| ||||||||    
T  37046706 cacaagacttttttatgataaaaatatcttttaaaattccttagaatcatgatccaatacacc 37046768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 19741054 - 19741198
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||| ||||||||||| |||||||| || ||||||||  |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |    
T  19741054 tgattaaaagtcttgactgaataccacatgactttttataaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttga 19741153  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    ||||||||||||||| |||||||| | |||||||||||||||||||    
T  19741154 ttgaataccacaagattttttcatga-taaaaagtcttttaaaatc 19741198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 7007426 - 7007278
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac-nnnnnnnaagttgcaaaaagtattaattgaata 107  Q
    ||||||||||||||||| || ||||||||| |||||||| ||| ||||||||||||  ||||||||        || ||| ||| ||| || ||||||||    
T  7007426 agtcttgattgaataccacatgactttttttaaatgacagagaatcttgattgaataacacaagacttttttttaaattgaaaagagtcttgattgaata 7007327  T
Q  108 ccacaagactttttcataattaaaaagtcttttaaaatcccataaaatc 156  Q
    |||||| |||||||||| || ||||||||| |||||||||| |||||||    
T  7007326 ccacaaaactttttcattataaaaaagtctattaaaatcccttaaaatc 7007278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 28483954 - 28483883
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaat 161  Q
    |||||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  28483954 aaaagtcttgattgaatacctcaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaat 28483883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 25504793 - 25504931
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||| | ||||| |||||| ||||||  |||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  25504793 agtcttgattgaatatcacaagaatttttttaaatgatcaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 25504892  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||||||||||||| || ||||||| |||||||||||    
T  25504893 cacaagactttttcatgataaaaaagtattttaaaatcc 25504931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 30009831 - 30009993
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| || ||||||||| |||||| ||||| | |||||| |||  ||||||||       || ||| ||| ||| || |||||||||    
T  30009831 agtcttgattgaataccacaggactttttttaaatgataaagaattttgattaaataacacaagactttttttaaattggaaagagtcttgattgaatac 30009930  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
     | |||||||||||||||| |||| ||||||||||||||| || |||| | ||| ||||||||    
T  30009931 aataagactttttcataataaaaatgtcttttaaaatcccttagaatcatgatccaatacacc 30009993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 32684187 - 32684251
Alignment:
Q  97 ttaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaat 161  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| | ||| |||||||||    
T  32684187 ttaattgaataccacaagactttttcataattaaaaagtcctttaaaattctatagaatcctaat 32684251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 1112945 - 1112807
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||   |||| ||       || | | ||| ||| || ||||||||     
T  1112945 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataatacaatactttttttaaatcggaaagagtcttgattgaataa 1112846  T
Q  109 cacaagactttttcataat-taaaaagtcttttaaaatc 146  Q
    |||||||||||||||| ||  ||||||||||||||||||    
T  1112845 cacaagactttttcatgataaaaaaagtcttttaaaatc 1112807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28370984 - 28370911
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||| |||||| ||||||||||| |||||||||||||||||| |||||||||| ||||||||||  ||||||||    
T  28370984 tgataaaaagttttgattgaatatctcaagacttttttaaaacgacaaagagttttgattgaataccacaagac 28370911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 28370927 - 28370859
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatac 168  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |  || |||||||||| |||||    
T  28370927 attgaataccacaagactttttcataattaaaaagtcctttaaaattcattagaatcctaatccaatac 28370859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 7249926 - 7250089
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnn-aagttgcaaaaagtattaattgaata 107  Q
    ||||||||| ||||||| |||||  ||||| ||||||| |||| ||||||||||||  ||||||||        || ||| ||| ||| || ||||||||    
T  7249926 agtcttgatcgaataccacaagatattttttaaatgactaagaatcttgattgaataacacaagacttttttttaaattgaaaagagtcttgattgaata 7250025  T
Q  108 ccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||| |||||||| || ||||||||||||||||| || || |||| | ||| ||||||||    
T  7250026 ccacaagattttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacc 7250089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 12112993 - 12112932
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||    
T  12112993 ttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagac 12112932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 34141627 - 34141680
Alignment:
Q  116 ctttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  34141627 ctttttcataattaaaaagtcttttaaaatctcataaaatcttaatccaataca 34141680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 11090408 - 11090336
Alignment:
Q  2 gatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||||||||||||||||||||||| ||| |||||||| || || |||||| ||||||||||||  ||||||||    
T  11090408 gatgaaaagtcttgattgaataccacaaaactttttttaagtggcaaagattcttgattgaataccacaagac 11090336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 37915798 - 37915730
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||||||||||||||||||| |||||||||||| || | ||||| ||||||||||||||  ||||||||    
T  37915798 aaaagtcttgattgaataccacaagactttttttaagttacaaaaagtcttgattgaataccacaagac 37915730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 39307374 - 39307502
Alignment:
Q  18 tgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagact 117  Q
    |||||||| |||||||||||| ||||||  |||| ||||||||||||  ||||||||       || | ||||||| | || |||||||||||||| |||    
T  39307374 tgaataccacaagactttttttaaatgatgaagaatcttgattgaataccacaagacttttttaaaatggcaaaaaatcttgattgaataccacaaaact 39307473  T
Q  118 ttttcataattaaaaagtcttttaaaatc 146  Q
    |||| |||||  ||| |||||||||||||    
T  39307474 ttttgataatataaatgtcttttaaaatc 39307502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39307399 - 39307462
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||| | ||||||||||||||| |||||||||||||||||| |||| | ||||||||||||    
T  39307399 tgatgaagaatcttgattgaataccacaagacttttttaaaatggcaaaaaatcttgattgaat 39307462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 28100584 - 28100666
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataat-taaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| || |||||||||||||||||||||| |||||  |||||||||||||||| ||| | |||||| |||| ||||||||    
T  28100584 aaaagtcttgattgaataccacaagacttttttataataaaaaaagtcttttaaaaccccttgaaatcccaatccaatacacc 28100666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 146
Target Start/End: Original strand, 36728057 - 36728103
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  36728057 attgaatactacaagactttttcataattaaaaaatcttttaaaatc 36728103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 171
Target Start/End: Complemental strand, 41762062 - 41761980
Alignment:
Q  89 aaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||| || ||| |||||||||||||||||| ||||| | |||||||||||||||||  |||||||  |||| ||||||||    
T  41762062 aaaaagtcttgattcaataccacaagacttttttataatcacaaagtcttttaaaatcctttaaaatctcaatccaatacacc 41761980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 11090352 - 11090283
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||| || ||||||||||||| | |||||||||||| |  ||||| |||||||||||    
T  11090352 attgaataccacaagacattctcataattaaaaaatattttaaaatcccttggaatcccaatcaaataca 11090283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 36479434 - 36479478
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  36479434 attgaataccacaagactttttcataattaaaaa-tcttttaaaat 36479478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 38230854 - 38230773
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| || |||||||||||| ||||||||||||  | |||||||||||||||||||| | |||||| |||  ||||||||    
T  38230854 aaaagtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatcccttgaaatcccaattcaatacacc 38230773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 467847 - 467799
Alignment:
Q  97 ttaattgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  467847 ttaattgaatacgacaaaactttttcataattaaaaaatcttttaaaat 467799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 24736419 - 24736336
Alignment:
Q  85 ttgcaaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||| ||| || |||||||| |||||||| ||| |||||||||||| ||||||||||| || || |||||||||| ||||||    
T  24736419 ttgcaaagagtcttgattgaatatcacaagacattt-cataattaaaaaatcttttaaaattccttagaatcctaatccaataca 24736336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 25446054 - 25445998
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatc 156  Q
    ||||||||  ||||||||||||||| || |||||||||||||||||||| |||||||    
T  25446054 attgaataatacaagactttttcatgataaaaaagtcttttaaaatcccttaaaatc 25445998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 28483959 - 28483923
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttt 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  28483959 tgatgaaaagtcttgattgaatacctcaagacttttt 28483923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 42786729 - 42786657
Alignment:
Q  100 attgaataccacaagactttttcataat-taaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||| || |||| | ||| ||||||||    
T  42786729 attgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 42786657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 44646803 - 44646747
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    |||||| || |||||||||||||||| ||||| || |||||||||||||||||||||    
T  44646803 aaaagtcttgattgaataccacaagatttttttatcattaaaaagtcttttaaaatc 44646747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 170
Target Start/End: Complemental strand, 53271991 - 53271911
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacac 170  Q
    |||||| || |||||||| ||||||||||||| ||  | |||||||||||||||||||||| |||||| |||  |||||||    
T  53271991 aaaagtcttgattgaatatcacaagacttttttattttaaaaaagtcttttaaaatcccatgaaatcccaattcaatacac 53271911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 28847104 - 28847183
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||| || |||||||||||| ||||||||| || || |||||||||||||||||||  |||||||  |||| ||||||    
T  28847104 aaaagttttgattgaataccactagacttttttattataaaaaagtcttttaaaatcctttaaaatctcaatccaataca 28847183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 23465007 - 23464845
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    |||||||||||||||   ||| |||||||| ||||||||| || ||||||||||||   |||||||       |  ||| ||| ||| || |||||||||    
T  23465007 agtcttgattgaatattacaaaactttttttaaatgacaaggaatcttgattgaataatacaagactttttttatattggaaagagtcttgattgaatac 23464908  T
Q  109 cacaagactttttcataat--taaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||| ||   ||||| ||||||||||| || || |||| ||||| ||||||    
T  23464907 cacaagactttttcatgataaaaaaaaatcttttaaaattccttagaatcataatccaataca 23464845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 40537341 - 40537406
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||| | |||||||||||| |||| | |||||||||| |||||||  ||||||||    
T  40537341 agtcttgattgaataacacaagactttttttaaattagaaagagtcttaattgaataccacaagac 40537406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 543936 - 543888
Alignment:
Q  97 ttaattgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    ||||||||||| ||||||||||||| ||  |||||||||||||||||||    
T  543936 ttaattgaatatcacaagacttttttatttttaaaaagtcttttaaaat 543888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 40143858 - 40143822
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| |||||||||||||||    
T  40143858 aaaagtcttgattgaatacctaaagacttttttaaaa 40143822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 53275899 - 53275827
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaaga 73  Q
    |||| |||| ||||||||||||||  |||||||||||| |||||||||| | |||| |||||||  |||||||    
T  53275899 tgattaaaaatcttgattgaatactacaagactttttttaaatgacaaataatctttattgaataacacaaga 53275827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 54509796 - 54509760
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| |||||||||||||||    
T  54509796 aaaagtcttgattgaatacctaaagacttttttaaaa 54509760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 8584017 - 8584064
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||||||||||||||||||  | ||| |||||||||||||||||||    
T  8584017 attgaataccacaagacttttataaaataaaaaagtcttttaaaatcc 8584064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 16653326 - 16653255
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||||||||  |  |||||| |||||||||||| |||| |||||| |||  ||||||||    
T  16653326 attgaataccacaagacttttttttttttaaaatgtcttttaaaattccatgaaatcccaattcaatacacc 16653255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 25446102 - 25446048
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||||||||| ||||| |||||| |||||||||| | ||||||||||||    
T  25446102 agtcttgattgaataccacaagaatttttttaaatgacaaa-aatcttgattgaat 25446048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 47301388 - 47301329
Alignment:
Q  97 ttaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatc 156  Q
    ||||||||||||||||||||| ||| ||  |||||||||||| ||||||  |||||||||    
T  47301388 ttaattgaataccacaagactattttatttttaaaaagtcttataaaattacataaaatc 47301329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 16018975 - 16018929
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    ||||| |||| ||| ||||||| ||||||||||||||||||||||||    
T  16018975 attgattacctcaaaacttttttataattaaaaagtcttttaaaatc 16018929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 41320830 - 41320788
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaaga 51  Q
    ||||||||||||||||| |||||||||||| |||||| |||||    
T  41320830 agtcttgattgaataccacaagactttttttaaatgataaaga 41320788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 44771057 - 44771095
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtctt 138  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  44771057 attgaatatcacaagactttttcataatcaaaaagtctt 44771095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 28100584 - 28100617
Alignment:
Q  6 aaaagtcttgattgaatacctcaagactttttta 39  Q
    |||||||||||||||||||| |||||||||||||    
T  28100584 aaaagtcttgattgaataccacaagactttttta 28100617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 41581938 - 41581991
Alignment:
Q  5 gaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttga 58  Q
    ||||| |||| | |||||||| |||||||||||||||||||||||  |||||||    
T  41581938 gaaaattcttaactgaataccacaagacttttttaaaatgacaaaatgtcttga 41581991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 42786770 - 42786713
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||| | |||||||||| ||||||  |||||||||||||||||  ||||||||    
T  42786770 ttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaagac 42786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 53594158 - 53594113
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    ||||||| |||||||||||||  ||||| |||||||||||||||||    
T  53594158 attgaatgccacaagacttttctataataaaaaagtcttttaaaat 53594113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 26336159 - 26336123
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  26336159 aaaagtcttgattgaatacctaaagacatttttaaaa 26336123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 41762061 - 41762017
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaatgacaaag 50  Q
    ||||||||||||| |||||| ||||||||||||| ||| ||||||    
T  41762061 aaaagtcttgattcaataccacaagacttttttataatcacaaag 41762017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 47685226 - 47685190
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  47685226 aaaagtcttgattgaatacctaaagatttttttaaaa 47685190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 36674276 - 36674444
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  36674276 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 36674375  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  36674376 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 36674444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 44906659 - 44906825
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  44906659 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 44906758  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaata 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  44906759 ttgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaata 44906825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 10660595 - 10660427
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  10660595 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 10660496  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  10660495 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcttaatccaataca 10660427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 18749630 - 18749460
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  18749630 tgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 18749531  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||| ||||||||    
T  18749530 ttgaataccacaagactttttcataattaaaaagtcttttaaaattctatagaatcctaatccaatacacc 18749460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 54628903 - 54628742
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  54628903 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 54628804  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatc 162  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  54628803 ttgaataccacaagacgttttcataattaaaaagtcttttaaaatctcatagaatcctaatc 54628742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 23753532 - 23753700
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||       || ||||||||||| || |    
T  23753532 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 23753631  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  23753632 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcctatagaatcctaatccaataca 23753700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 52618111 - 52618279
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||       ||||| |||||| | || |    
T  52618111 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatatcacatgactttttttaagttacaaaaaatcttga 52618210  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  52618211 tcgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatctaataca 52618279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 50762198 - 50762364
Alignment:
Q  3 atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaatt 102  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |||    
T  50762198 atgaaaagtcatgattgaatatctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgatt 50762297  T
Q  103 gaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  50762298 gaataccacaatactttttcataattaaaaagtcttttaaaatcccatataatcctaatccaataca 50762364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 11431586 - 11431418
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||       || ||||||||||| || |    
T  11431586 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctttattgaataccacaagactttttttaaattgcaaaaagtcttga 11431487  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| ||||||    
T  11431486 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcttatagaatcctaatccaataca 11431418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 31646430 - 31646590
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||  || |||||       |||||||||||||| || |    
T  31646430 tgatgaaaagtcttgattgaatacgtcaagacttttttaaaataacaaagagtcttgattgaataccataagactttttttaagttgcaaaaagtcttga 31646529  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31646530 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 31646590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 40897204 - 40897035
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||       |||||||||||| | || |    
T  40897204 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgaatgaataccacaagactttttttaagttgcaaaaaatcttga 40897105  T
Q  101 ttgaataccacaaga-ctttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||  ||||||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  40897104 ttgaataccacaagatttttttcataattaaaaagtgttttaaaatcccatagaatcctaatccaataca 40897035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 50903389 - 50903549
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  50903389 tgataaaaagtcttgattgaataccttaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 50903488  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaat 161  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||    
T  50903489 ttgaataccacaagactttttcatacttaaaaagtattttaaaatcccatagaatcataat 50903549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 27240408 - 27240557
Alignment:
Q  20 aatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagacttt 119  Q
    |||||||||| ||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || ||||||||||||||||||||    
T  27240408 aatacctcaaaacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagacttt 27240507  T
Q  120 ttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  27240508 ttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 27240557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 51737872 - 51738039
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagactttttt-aaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtatta 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||  ||||||||       ||||||| |||||| ||     
T  51737872 tgatgaaaagtcttgattgaatacctcaagactttttttaaaatgataaagagtcttgattgaataccacaagactttttttaagttgctaaaagtctt- 51737970  T
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
     ||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  51737971 -ttgaataccacaagattttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 51738039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 48379217 - 48379050
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||        |||||||||||| | || |    
T  48379217 tgatgaaaagtctagattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaa-atcacaagattttttttaagttgcaaaaaattttga 48379119  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||| |||| ||||| ||||||    
T  48379118 ttgaataccacgagactttttgataattaaaaagtcttttaaaatcctatagaatcataatccaataca 48379050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 20833052 - 20832887
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| ||||       ||||| |||||| | || |    
T  20833052 tgatgaaaattcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattaaataccacgagac---ttttaagttacaaaaaatcttga 20832956  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| |||| |||||||||| ||||||    
T  20832955 ttgaataccacaaaactttttcataattaaaaaatcttttaaaatctcatagaatcctaatccaataca 20832887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 6035199 - 6035368
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||  | ||       ||||||||||||   || |    
T  6035199 tgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagactcttgattgaataccatga-actttatttaagttgcaaaaaaacttga 6035297  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||    
T  6035298 ttgaataccacaagattttttcataattaaaaagtcttttaaaatcccataaaatcttaatctgatacacc 6035368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 26107321 - 26107153
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcac-aagacnnnnnnnaagttgcaaaaagtatta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |   || |||||       |||||||||||||| ||     
T  26107321 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattgagtacgactaagac-ttttttaagttgcaaaaagtcttg 26107223  T
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||| |||| |||||||||| ||||||    
T  26107222 attgaatattacaagactttttcataattaaaaaatcttttaaaatctcatagaatcctaatccaataca 26107153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 35337787 - 35337648
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||||||||||||| || ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  35337787 agtcttgattgaataccacaagacttttttaaaatgacaaggaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 35337688  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  35337687 cacaagactttttcataataaaaaagtcttttaaaatccc 35337648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 12103689 - 12103545
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||  ||| ||||       || || |||| |||||| |    
T  12103689 tgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagaatcttaattgaataccacgagacttttttaaa-ttacaaagagtattga 12103591  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||    
T  12103590 ttgaatacaacaagactatttcataattaaaaagtcttttaaaatc 12103545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 19253879 - 19253740
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  19253879 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 19253780  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  19253779 cacaagactttttcatgataaaaaagtcttttaaaatccc 19253740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 6975808 - 6975643
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||  ||||||||       ||||| |||| ||| ||      
T  6975808 tgatgaaaagtcttgattgaatacctcaagact-ttttaaaataacaaagagtcttgattgaataccacaagactttttttaagttacaaagagtcttcg 6975710  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaata 167  Q
     |||||| |||||||||||||||| |||||||| | |||||||||  |||| |||||||||| ||||    
T  6975709 ctgaatatcacaagactttttcatcattaaaaaatattttaaaatttcatagaatcctaatccaata 6975643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 39842656 - 39842743
Alignment:
Q  82 aagttgcaaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  39842656 aagttgcaaaaagtcttgattgaataccacaaaactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 39842743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10728787 - 10728860
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  10728787 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagac 10728860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 20498261 - 20498100
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||| ||       || ||| ||| ||| || |||||||||    
T  20498261 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaatac 20498162  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| | ||||||||||||||||||||| || |||| | ||| ||||||||    
T  20498161 cacaagactttttcatga-taaaaagtcttttaaaatcccttagaatcatgatccaatacacc 20498100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34484176 - 34484249
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  34484176 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagac 34484249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 37820633 - 37820770
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatacca 110  Q
    ||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||||    
T  37820633 tcttgattgaataccacaagaatttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatacca 37820732  T
Q  111 caagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||||||| || ||||||||||||||||||||    
T  37820733 caagactttttcatgataaaaaagtcttttaaaatccc 37820770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 996242 - 996401
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatacca 110  Q
    ||||||||||||||| |||||||||||| |||||| ||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||||    
T  996242 tcttgattgaataccacaagacttttttgaaatgataaagaatcttgattgaataacacaagactttttttaa-ttggaaagagtcttgattgaatacca 996340  T
Q  111 caagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  996341 caagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 996401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39038100 - 39038037
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39038100 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 39038037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 44762191 - 44762330
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||  || ||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  44762191 agtcttgattgaatactacatgactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatac 44762290  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  44762291 cacaagactttttcattataaaaaagtcttttaaaatccc 44762330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17946348 - 17946275
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  17946348 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattgaataccacaagac 17946275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 44276449 - 44276329
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||       || || |||| ||| ||||    
T  44276449 tgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagttttaattgaataccacaagactttttttaaattacaaagagtcttaa 44276350  T
Q  101 ttgaataccacaagacttttt 121  Q
    |||||||||||| ||||||||    
T  44276349 ttgaataccacatgacttttt 44276329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 52810438 - 52810375
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52810438 tgatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaat 52810375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 10139300 - 10139439
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||| || || ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  10139300 agtcttgattgaataccacaagactttttttaaatgataaggaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 10139399  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||||||||| || ||||||| ||||||||||||    
T  10139400 cacaagactttttcatgataaaaaagtattttaaaatccc 10139439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 29449012 - 29449176
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnn--aagttgcaaaaagtattaattgaat 106  Q
    ||||||||||||||| | |||||||||||  ||||||||| || ||||||||||||  ||||||||         || ||| ||| |||||| |||||||    
T  29449012 agtcttgattgaatatcacaagactttttgtaaatgacaaggaatcttgattgaataacacaagacttttttttaaatttggaaagagtattgattgaat 29449111  T
Q  107 accacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||| ||||||||||| |||||||||||||||||||| || |||| | ||| ||||||||    
T  29449112 accacaagattttttcataataaaaaagtcttttaaaatcccttataatcatgatctaatacacc 29449176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37454921 - 37454858
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  37454921 tgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaagaatcttgattgaat 37454858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 52810464 - 52810312
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagac 116  Q
    ||||||||| |||||||||||| ||||||  || ||||||||||||||  | ||| ||       || |  |||| ||| || |||||||||||||| ||    
T  52810464 ttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaataccacaacac 52810365  T
Q  117 tttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||    
T  52810364 tttttcatagttaaaaagtcttttaaaatcccatagaatcctaatccaataca 52810312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 10728844 - 10728913
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||||||    
T  10728844 attgaataccacaagactttttcataattaaaaagtcttttaaaattccatagaatgctaatccaataca 10728913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 6589616 - 6589455
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| ||||||||| || | ||||||||||  ||||||||       || ||  ||| ||| ||||||||||||    
T  6589616 agtcttgattgaataccacaagactttttttaaatgacaaggaatattgattgaataacacaagactttttttaaattagaaagagtcttaattgaatac 6589517  T
Q  109 cacaagactttttcataat-taaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||| ||  ||||||||||||||| |||| || |||| | ||| ||||||    
T  6589516 cacaagactttttcatgataaaaaaagtcttttaaagtcccttagaatcatgatccaataca 6589455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15493006 - 15493061
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 56  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15493006 tgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagtctt 15493061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 17946291 - 17946223
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||    
T  17946291 attgaataccacaagactttttcataattaaaaagtctttt-aaatcctatagaatcctaatccaataca 17946223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25418426 - 25418353
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||    
T  25418426 tgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagac 25418353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 52114588 - 52114446
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||||||| ||||| ||||||  |||||||        || ||| ||| ||  || |    
T  52114588 tgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatcttggttgaataacacaagattttttttaaattgaaaatag--ttga 52114491  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    ||||||||||||||||||| |||| || ||||| |||||||||||    
T  52114490 ttgaataccacaagactttatcatgataaaaaaatcttttaaaat 52114446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 29030058 - 29029898
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||  ||||||||        | ||  ||  ||| || |||||||||    
T  29030058 agtcttgattgaataccacaagactttttttaaatgacaaagagtcttaattgaataacacaagactttttcttaattagaatgagtcttgattgaatac 29029959  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||| | |||||||| ||  ||||||||||||||||||| || |||| | ||| ||||||    
T  29029958 cacaatattttttcatgatataaaagtcttttaaaatcccttagaatcatgatccaataca 29029898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32580236 - 32580174
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  32580236 tgatgaaaagtctt-attgaatacctcaagacttttttaaaatgacaaagagccttgatcgaat 32580174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 33807953 - 33808095
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaat-- 106  Q
    ||||||||||||||||| |||||||||||| |||||||||||| |||| |||||||  ||||||||       || ||| ||| | | || |||||||      
T  33807953 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttaattgaataacacaagactttttttaaattgaaaagaattttgattgaatac 33808052  T
Q  107 -accacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
     ||||||||||||||| || || ||||||||||||||||||||    
T  33808053 caccacaagacttttttatgataaaaaagtcttttaaaatccc 33808095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 38772338 - 38772267
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |  | |||||||||| ||||||||    
T  38772338 attgaataccacaagactttttcataaataaaaagtcttttaaaatctctcagaatcctaatctaatacacc 38772267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 1440106 - 1440242
Alignment:
Q  9 agtcttgattgaatacctcaagactttttta-aaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaata 107  Q
    ||||||||||||||||| ||| ||||||||  |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || ||||||||    
T  1440106 agtcttgattgaataccacaaaacttttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaa-ttgaaaatagtcttgattgaata 1440204  T
Q  108 ccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    ||||||||||||||||| | |||||||| ||||||||||    
T  1440205 ccacaagactttttcatga-taaaaagtattttaaaatc 1440242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 3206359 - 3206512
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||         ||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  3206359 agtcttgattgaataccacaagacttttt---------aaagaatcttgattgaataccacaagactttttttaaattgaaaagagtcttgattgaatac 3206449  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  3206450 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 3206512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 3999799 - 3999864
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||    
T  3999799 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagac 3999864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 51699633 - 51699770
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||   |||||||       || ||| ||| ||| || |||||||||    
T  51699633 agtcttgattgaataccacaagattttttttaaatgacaaagaatcttgattgaataatacaagactttttttaaattgaaaagagtcttgattgaatac 51699732  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    ||||| | |||||| | || ||||| ||||||||||||    
T  51699733 cacaaaattttttcttgataaaaaaatcttttaaaatc 51699770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 12734085 - 12734156
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  12734085 attgaataccacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 12734156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 33996695 - 33996750
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||    
T  33996695 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaat 33996750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 53929282 - 53929336
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaa 63  Q
    ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  53929282 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaa 53929336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 539626 - 539695
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| | || || ||||||| ||||||    
T  539626 attgaataccacaaggctttttcataattaaaaaatcttttaaaatctcttagaaccctaatccaataca 539695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 40246896 - 40246734
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||||  |||||||        ||     ||| ||| || |||||||||    
T  40246896 agtcttgattgaataccacaaaactttttttaaatgacaaagaatcttgattgaataacacaagattttttttaaaccagaaagagtcttgattgaatac 40246797  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||  || ||||||| |||||||||| | || |||| | ||| ||||||||    
T  40246796 cacaagactttttcacgataaaaaagttttttaaaatctcttagaatcatgatccaatacacc 40246734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 45215403 - 45215484
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| || |||||||||||||||| ||||| || ||||||||||||||||||||||| | ||||| ||||  ||||||||    
T  45215403 aaaagttttgattgaataccacaagatttttttattattaaaaagtcttttaaaatcccttcaaatcttaatttaatacacc 45215484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 15493961 - 15494045
Alignment:
Q  85 ttgcaaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||| ||| || ||| ||||| |||||| |||||||||||||||||||||||||||||||| || |||  ||||| ||||||    
T  15493961 ttgcaaagagtcttgattaaatactacaagattttttcataattaaaaagtcttttaaaatcccttagaattataatccaataca 15494045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 27899430 - 27899301
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagac 116  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||||  || | |||       |||||| ||| | | | ||||||||||||||| |     
T  27899430 ttgaataccaccagactttttttaaatgacaaagagtcttgattgaataccatatgactttttttaagttggaaagaatctgaattgaataccacaaaaa 27899331  T
Q  117 tttttcataattaaaaagtcttttaaaatc 146  Q
      ||||||||| ||||||||||||||||||    
T  27899330 aatttcataataaaaaagtcttttaaaatc 27899301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 55235245 - 55235077
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||| ||| |||||||||||||||  ||||||||||||||||||| || |||||||| ||   ||||||||       |||||| |||  || || |    
T  55235245 tgatgaagagttttgattgaatacctcgtgacttttttaaaatgacaa-gaatcttgattaaagaccacaagactttttt-aagttgtaaagggtcttga 55235148  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||| ||| | | ||||||||||||||||||||||||||||| || || |||| ||||| | ||||||    
T  55235147 ttgaataacactatattttttcataattaaaaagtcttttaaaattccttagaatcttaatccactacacc 55235077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 6131325 - 6131380
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||||||||| ||| |||||||| ||||||||| |||||||||||||||    
T  6131325 agtcttgattgaataccacaaaactttttttaaatgacaatgagtcttgattgaat 6131380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 10105016 - 10105074
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||| || |||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  10105016 aaaagtcttgattgaataccacaagatttttttataataaaaaagtcttttaaaatccc 10105074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 10216163 - 10216221
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||| || |||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  10216163 aaaagtcttgattgaataccacaagacttttttataataaaaaaatcttttaaaatccc 10216221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 10225792 - 10225850
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||| || |||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  10225792 aaaagtcttgattgaatagcacaagacttttttataataaaaaagtcttttaaaatccc 10225850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 50901199 - 50901255
Alignment:
Q  113 agactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||| |||||||||||||||||||||||||| ||||||  ||||| ||||||    
T  50901199 agacttttttataattaaaaagtcttttaaaatcccttaaaattttaatccaataca 50901255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 2024168 - 2024109
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatccta 159  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||| | ||| ||||||    
T  2024168 attgaataccacaagactttttcataataaaaaaatattttaaaatctcttaacatccta 2024109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 10104895 - 10104950
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||| |||||||||    
T  10104895 aaaagttttgattgaataccacaagacttttttataatcaaaaagttttttaaaat 10104950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 10216042 - 10216097
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||| |||||||||    
T  10216042 aaaagttttgattgaataccacaagacttttttataatcaaaaagttttttaaaat 10216097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 10225671 - 10225726
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||| |||||||||    
T  10225671 aaaagtcttgattgaataccacaagacttttttataatcaaaaagttttttaaaat 10225726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18749672 - 18749609
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||| || |||||||||||||||||||||||||| |||  || ||| ||||||||||    
T  18749672 tgatgaaaagtttttattgaatacctcaagacttttttaaagtgatgaaaagttttgattgaat 18749609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 27240439 - 27240504
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||| |||||||||||| || |  |||| ||||||||||||||  ||||||||    
T  27240439 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaataccacaagac 27240504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 28146261 - 28146318
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||| || |||||||||| || ||||||||||| || |||||||||||||||||||    
T  28146261 aaaagtcttgattgaataccccatgactttttcatcataaaaaagtcttttaaaatcc 28146318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 45926971 - 45927032
Alignment:
Q  110 acaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||| ||||| |||||||||||||||||||  |||||||  |||| ||||||||    
T  45926971 acaagacttttttataatcaaaaagtcttttaaaatcctttaaaatctcaatccaatacacc 45927032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 539550 - 539586
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttt 37  Q
    ||||||||| |||||||||||||||||||||||||||    
T  539550 tgatgaaaaatcttgattgaatacctcaagacttttt 539586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 10067700 - 10067744
Alignment:
Q  104 aataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||    
T  10067700 aataccacaaaacttttttataatgaaaaagtcttttaaaatccc 10067744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 22057725 - 22057653
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaa-gtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||| |||||||||| || ||||| ||||||||||||||| || |||| | ||| ||||||||    
T  22057725 attgaataccacaatactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 22057653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 27593234 - 27593198
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| |||||||||||||||    
T  27593234 aaaagtcttgattgaatacctaaagacttttttaaaa 27593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 36786053 - 36786017
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| |||||||||||||||    
T  36786053 aaaagtcttgattgaatacctaaagacttttttaaaa 36786017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 19552160 - 19552231
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||||||||  | ||| ||||| |||||||||||||  |||||||  |||| ||||||||    
T  19552160 attgaataccacaagacttttataaaataaaaaaatcttttaaaatcctttaaaatctcaatccaatacacc 19552231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 50900459 - 50900530
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||||||||  | ||  |||||||||||||||||||  | ||||| ||||| ||||||||    
T  50900459 attgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatcttaatccaatacacc 50900530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 6131367 - 6131481
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||| | ||| |||||||| ||||||||| |  ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  6131367 agtcttgattgaataacacaaaactttttttaaatgacaatggatcttgattgaataacacaagacttttttcaa-ttggaaagagtcttgattgaatac 6131465  T
Q  109 cacaagactttttcat 124  Q
    ||||| ||||||||||    
T  6131466 cacaaaactttttcat 6131481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 2024217 - 2024152
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||||||||| |||| | ||||| | |||| |||||||||| ||||||||||||||  ||||||||    
T  2024217 agtcttgattaaatatcacaagattatttttaaatgacaaatagtcttgattgaataccacaagac 2024152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 6589650 - 6589593
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||| | |||||||||| ||||||  |||||||||||||||||  ||||||||    
T  6589650 ttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaagac 6589593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 10216163 - 10216196
Alignment:
Q  6 aaaagtcttgattgaatacctcaagactttttta 39  Q
    |||||||||||||||||||| |||||||||||||    
T  10216163 aaaagtcttgattgaataccacaagactttttta 10216196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 10225671 - 10225704
Alignment:
Q  6 aaaagtcttgattgaatacctcaagactttttta 39  Q
    |||||||||||||||||||| |||||||||||||    
T  10225671 aaaagtcttgattgaataccacaagactttttta 10225704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 32580136 - 32580068
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||  ||||||||||||||||||| |||  | |||||||||| |||| |||||||||| ||||||    
T  32580136 attgaatattacaagactttttcataatt-aaattttttttaaaatctcatagaatcctaatccaataca 32580068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 37454947 - 37454890
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||| |||||||||||| ||||||  || |||||||||||||| || ||||||    
T  37454947 ttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatatctcaagac 37454890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 46749317 - 46749276
Alignment:
Q  106 taccacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||||||||||||| ||||| ||||| |||||||||||||    
T  46749317 taccacaagacttttttataataaaaaaatcttttaaaatcc 46749276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 54625644 - 54625579
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||  ||||| |||||| ||||||||| || | ||||||||||  ||||||||    
T  54625644 agtcttgattgaatacaacaagattttttttaaatgacaacgaatattgattgaataacacaagac 54625579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 539588 - 539632
Alignment:
Q  20 aatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    |||||| |||||||||||| |||| ||||||||| ||||||||||    
T  539588 aataccacaagactttttttaaattacaaagagttttgattgaat 539632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 39338299 - 39338335
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  39338299 aaaagtctttattgaatacctaaagacttttttaaaa 39338335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 49230940 - 49230772
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  49230940 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaatttgcaaaaagtcttga 49230841  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  49230840 ttgaataccacatgactttttcataattaaaaagtcttttaaaatcccataaaatcctaatccaataca 49230772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 46328096 - 46327935
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  46328096 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagttttga 46327997  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatc 162  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  46327996 ttgaataacacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatc 46327935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 15835199 - 15835367
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  15835199 tgatgagaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 15835298  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  15835299 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 15835367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 18798545 - 18798384
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  18798545 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 18798446  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatc 162  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  18798445 ttgaataccacaagacattttcataattaaaaagtcttttaaaatctcatagaatcctaatc 18798384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 6312628 - 6312460
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| ||       || ||||||||||| || |    
T  6312628 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttaattgaataccacaaaactttttttaaattgcaaaaagtcttga 6312529  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  6312528 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 6312460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 8141274 - 8141434
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||       |||||||||||||| || |    
T  8141274 tgatgaatagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaaactttttttaagttgcaaaaagtcttga 8141373  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8141374 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaat 8141434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 25612211 - 25612043
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  25612211 tgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 25612112  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  25612111 ttgaataccacaagattttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 25612043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 5495242 - 5495410
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||       |||||||||||||| || |    
T  5495242 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttaattgaataccacaagacttcctttaagttgcaaaaagtcttga 5495341  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||| |||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||    
T  5495342 ttgaataccacatgactttttcataattaaaaagttttttaaaatctcatagaatcctaatccaataca 5495410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29396534 - 29396702
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||        || ||||||||||| || |    
T  29396534 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccaaaagattttttttaaattgcaaaaagtcttga 29396633  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  29396634 ttgaataccacaagactttttcataattaaaaagtcttttaaaataccatagaatcctaatccaataca 29396702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 28387539 - 28387705
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  || |||||       || ||||||||||| || |    
T  28387539 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattgaataccaaaagactttttttaaattgcaaaaagtcttga 28387638  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaata 167  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  28387639 ttgaataccataagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaata 28387705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 29219340 - 29219174
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||  ||||||||       |||||||||||||| || |    
T  29219340 tgatgaaaagtcttgattgaatatctcaagacttttttaaaatgaca--gagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 29219243  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  29219242 ttgaataccacaagactttttcataattaaaaagtcttttaaaattccatataatcctaatccaataca 29219174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 9322646 - 9322814
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||          || ||||||||||| || |    
T  9322646 tgatgaaaagtcttgatcgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaatttttttttaaattgcaaaaagtcttga 9322745  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  9322746 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 9322814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 45272640 - 45272473
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||   ||||||        |||||||||||||| || |    
T  45272640 tgatgaaaagtcttgattgaatacctcaagacttttt-aaaatgacaaagagttttgattgaatacaacaagattttttttaagttgcaaaaagtcttta 45272542  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  45272541 ttgaataccacaatattttttcataattaaaaagtcttttaaaatcccatagaatcttaatccaataca 45272473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 48177608 - 48177776
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||        |||||||||||||| || |    
T  48177608 tgatgaaaaattttgattgaatacctcaagacttttttaaaatgacaaagagtattgattgaataccacaagattttttttaagttgcaaaaagtcttga 48177707  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||| |||| ||||| ||||||    
T  48177708 ttgaataccacaagactttttcataattaaaaaacattttaaaatcccatagaatcttaatccaataca 48177776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 51701634 - 51701494
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  51701634 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactatttttaaattgcaaaaagtcttga 51701535  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaa 143  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||    
T  51701534 ttgaataccacaaaacttttt-ataattaaaaa-tcttttaaa 51701494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 9577578 - 9577746
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||| |||||| |||||| |||| |||||||||||||||||||||||||| |||||||||||||   |||| ||       |||||||||| ||| || |    
T  9577578 tgataaaaagttttgatttaatatctcaagacttttttaaaatgacaaagggtcttgattgaatacaacaatactttttttaagttgcaaatagtcttga 9577677  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |  |||||||||| ||||||    
T  9577678 ttgaataccacaaaactttttcatcattaaaaagtcttttaaaatcccttcgaatcctaatccaataca 9577746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 953865 - 953703
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||| ||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  953865 agtcttgatcgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 953766  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  953765 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 953703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 35279718 - 35279551
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  |||||| |       || ||| ||| ||| || |||||||||    
T  35279718 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagtctttttttaaattggaaagagtcttgattgaatac 35279619  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacctctta 176  Q
    |||||||||||||||| || |||||||||||||||||| | || |||| | ||| |||||||| ||||    
T  35279618 cacaagactttttcatgataaaaaagtcttttaaaatctcttagaatcatgatccaatacacccctta 35279551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 730194 - 730033
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  730194 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 730095  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| |  |||||||||||||||||||| || |||| | ||| ||||||||    
T  730094 cacaagactttttcatga-aaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 730033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 28824526 - 28824688
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||| | ||||||||||||  ||||||||       || ||  ||| ||| || |||||||||    
T  28824526 agtcttgattgaataccacaagactttttttaaatgacaaataatcttgattgaataacacaagactttttttaaattagaaagagtcttgattgaatac 28824625  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  28824626 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 28824688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 48668931 - 48669084
Alignment:
Q  14 tgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaa 113  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||       || || |||||  | || ||| |||||| |||    
T  48668931 tgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaatatcacaaaacgttttttaaattacaaaattttttgattaaatacctcaa 48669030  T
Q  114 gactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaata 167  Q
     || |||||||||||||||| ||||||||||||| |||| ||||||||| ||||    
T  48669031 aaccttttcataattaaaaaatcttttaaaatcctataatatcctaatccaata 48669084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 22183414 - 22183278
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatacca 110  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||| ||       || ||| ||| ||| || |||||||||||    
T  22183414 tcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaatacca 22183315  T
Q  111 caagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||||||||||| || |||||||||||||||||||    
T  22183314 caagactttttcatgataaaaaagtcttttaaaatcc 22183278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 50192705 - 50192841
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||||||||||||| || ||||||||||||  |||||||        || ||| ||| | | || |||||||||    
T  50192705 agtcttgattgaataccacaagacttttttaaaatgacaaggaatcttgattgaataacacaagattttttttaaattggaaagaatcttgattgaatac 50192804  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaat 145  Q
    ||||||||||||||||||| |||||||||||||||||    
T  50192805 cacaagactttttcataataaaaaagtcttttaaaat 50192841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 35679282 - 35679429
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||  ||||| |||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||  || |||||||||    
T  35679282 agtcttgattgaatactacaagattttttttaaatgacaaagaatcttgattgaataccacaagactttttttaaattgaaaagagccttgattgaatac 35679381  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatc 156  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||    
T  35679382 cacaagactttttcattataaaaaagtcttttaaaatcccttaaaatc 35679429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 21222193 - 21222032
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||| ||       || ||| ||| ||| || |||||||||    
T  21222193 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaa-actttttttaaattgaaaagagtcttgattgaatac 21222095  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||| ||||||||||||| || |||| | ||| ||||||||    
T  21222094 cacaagactttttcatgataaaaaagccttttaaaatcccttagaatcatgatccaatacacc 21222032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 38536237 - 38536308
Alignment:
Q  3 atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  38536237 atgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaataccacaagac 38536308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 38558455 - 38558526
Alignment:
Q  3 atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  38558455 atgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaataccacaagac 38558526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 45760163 - 45760326
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaat-gacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaata 107  Q
    ||||||||||||||||| || ||||||||| |||| |||||||| ||||||||||||  ||||||||       || ||| ||| ||| || ||||||||    
T  45760163 agtcttgattgaataccacatgactttttttaaattgacaaagaatcttgattgaataacacaagactttttttaaattgaaaagagttttgattgaata 45760262  T
Q  108 ccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||| || ||||| |||||||||||||| || |||| | ||| ||||||||    
T  45760263 ccacaagactttttcatgataaaaaaatcttttaaaatcccttagaatcatgatccaatacacc 45760326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 42290813 - 42290732
Alignment:
Q  86 tgcaaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaata 167  Q
    |||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| ||||    
T  42290813 tgcaaaaagttttgattgaataccacaagactttttcataattaaaaaatcttttaaaatcccatagaatcttaatccaata 42290732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 19452006 - 19452166
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatacca 110  Q
    ||||||||||||| | |||||||||||| ||||   ||||||||||||||||||  ||||||||       || ||| ||| ||| || |||||||||||    
T  19452006 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttttaaattggaaagagtcttgattgaatacca 19452105  T
Q  111 caagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||  || |||||||||||||||||||| || |||| | ||| ||||||||    
T  19452106 caagactttttcaagataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 19452166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 49198429 - 49198583
Alignment:
Q  16 attgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaaga 115  Q
    |||||||||| ||| |||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || ||||||||||||||||    
T  49198429 attgaataccacaaaactttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaa-ttgaaaagagtcttgattgaataccacaaga 49198527  T
Q  116 ctttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||| || ||||||||||||||||| || || |||| | ||| ||||||||    
T  49198528 ctttttcatgataaaaaagtcttttaaaattccttagaatcatgatccaatacacc 49198583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 38536292 - 38536353
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaat 161  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  38536292 attgaataccacaagacttttttataaataaaaagtcttttaaaatcccatataatcctaat 38536353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 38558510 - 38558571
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaat 161  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  38558510 attgaataccacaagacttttttataaataaaaagtcttttaaaatcccatataatcctaat 38558571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 19451962 - 19452074
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    |||||||||| |||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  19451962 agtcttgattaaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 19452061  T
Q  109 cacaagacttttt 121  Q
    |||||||||||||    
T  19452062 cacaagacttttt 19452074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 47784466 - 47784363
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagac 116  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||  ||||||||       || ||||||||||| || |||||||| ||||||||    
T  47784466 ttgaataccacaagacttttttaaa-tgacaaagagtcttgattgaataccacaagactttttttaacttgcaaaaagtcttgattgaatatcacaagac 47784368  T
Q  117 ttttt 121  Q
    |||||    
T  47784367 ttttt 47784363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 14494237 - 14494122
Alignment:
Q  27 caagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagactttttcataa 126  Q
    |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||||||||| |||||||| |    
T  14494237 caagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagattttttcatga 14494138  T
Q  127 ttaaaaagtcttttaa 142  Q
    | ||||||||||||||    
T  14494137 taaaaaagtcttttaa 14494122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 47654510 - 47654669
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcac-aagacnnnnnnnaagttgcaaaaagtattaattgaataccac 111  Q
    ||||||||||||| |||||||| ||| |||||||||||| ||||||||||||  ||| |||||       || ||| ||| ||| || || |||||||||    
T  47654510 ttgattgaataccacaagacttcttttaaatgacaaagaatcttgattgaataacacaaagactttttttaaattggaaagagtcttgatcgaataccac 47654609  T
Q  112 aagactttttcataat-taaaaagtcttttaaaatcccataaaatcctaatcaaatacac 170  Q
    ||||||||||||| ||  |||||||||||||||||||| || |||| | ||| |||||||    
T  47654610 aagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacac 47654669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 42657795 - 42657715
Alignment:
Q  91 aaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||| || |||||||||||||||||||||| |||||||||||||||||||||||| | | |||||  |||| ||||||||    
T  42657795 aaagtcttgattgaataccacaagacttttttataattaaaaagtcttttaaaatctcttgaaatctcaatccaatacacc 42657715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 25831133 - 25831196
Alignment:
Q  82 aagttgcaaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    ||||| |||||||| ||||||||||| || |||| |||||||||||||||||||||||||||||    
T  25831133 aagtttcaaaaagtcttaattgaatatcaaaagattttttcataattaaaaagtcttttaaaat 25831196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 6304415 - 6304546
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac-nnnnnnnaagttgcaaaaagtattaattgaataccacaaga 115  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||  ||        || ||| ||| ||| || ||||||||||||||||    
T  6304415 ttgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacagtacttttttttaaattggaaatagtcttgattgaataccacaaga 6304514  T
Q  116 ctttttcataattaaaaagtcttttaaaatcc 147  Q
    ||||||||| |  |||||||||||||||||||    
T  6304515 ctttttcatgaaaaaaaagtcttttaaaatcc 6304546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 27198353 - 27198272
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| || |||||||||||||||||||||| ||||  |||||||||||||||||||| |||| ||  |||| ||||||||    
T  27198353 aaaagttttgattgaataccacaagacttttttataaacaaaaagtcttttaaaatcccttaaagtctcaatccaatacacc 27198272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 49418130 - 49417993
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    |||||| |||||||||| ||  | |||||| ||||||||| || ||||||||||||  ||||||||       || ||| ||| ||| || ||||||||     
T  49418130 agtcttaattgaataccacataattttttttaaatgacaatgaatcttgattgaataacacaagactttttctaaattggaaagagtcttgattgaatat 49418031  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    |||| ||||||||||| || ||||||||||||||||||    
T  49418030 cacatgactttttcatgataaaaaagtcttttaaaatc 49417993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 51826838 - 51826918
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacac 170  Q
    |||||| || |||||||||||||||| ||||| || ||||||||||||||||||||||| | ||||| ||||  |||||||    
T  51826838 aaaagtcttgattgaataccacaagatttttttattattaaaaagtcttttaaaatcccttcaaatcttaattcaatacac 51826918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 19007581 - 19007639
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||| || |||||||||||| |||||||||||| || ||||||||||||||||||||    
T  19007581 aaaagtcttgattgaataccactagactttttcattataaaaaagtcttttaaaatccc 19007639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 19452046 - 19452111
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||| |||||||||||| ||||   ||||||||||||||||||  ||||||||    
T  19452046 agtcttgattgaataccacaagactttttttaaattggaaagagtcttgattgaataccacaagac 19452111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 29556150 - 29556015
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||| | |||||||||||| |||| |||| || |||| |||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  29556150 agtcttgattgaataacacaagactttttttaaataacaatgaatcttaattgaataacacaagactttttttaaattgaaaagagtcttgattgaatac 29556051  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    ||||| |||||||    || ||||||||||||||||||||    
T  29556050 cacaaaacttttt----ataaaaaagtcttttaaaatccc 29556015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 33025554 - 33025424
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccaca 112  Q
    ||||||||||||| ||||| ||||| |||||| |||||| ||||||||||||   |||| ||       || ||| ||||  | || |||||||||||||    
T  33025554 ttgattgaataccacaagaatttttaaaaatgtcaaagaatcttgattgaataagacaaaactttttttaaattggaaaattttttgattgaataccaca 33025455  T
Q  113 agactttttcataattaaaaagtcttttaaa 143  Q
    ||| |||||||| || |||||||||||||||    
T  33025454 agattttttcatgataaaaaagtcttttaaa 33025424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 47784433 - 47784368
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||| |||||||||    
T  47784433 agtcttgattgaataccacaagactttttttaacttgcaaaaagtcttgattgaatatcacaagac 47784368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 48194672 - 48194591
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| || |||||||||||| ||||||||||||  | |||||||||||||||||||| | |||||| |||  ||||||||    
T  48194672 aaaagtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatcccttgaaatcccaattcaatacacc 48194591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 48203430 - 48203349
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| || |||||||||||| ||||||||||||  | |||||||||||||||||||| | |||||| |||  ||||||||    
T  48203430 aaaagtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatcccttgaaatcccaattcaatacacc 48203349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 19893523 - 19893452
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||  ||||| ||||| || ||||||||||||||||||||||| ||||||| ||||  ||||||||    
T  19893523 attgaatactccaagatttttttatcattaaaaagtcttttaaaatcccttaaaatcttaattcaatacacc 19893452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 49198466 - 49198528
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||| | ||||||||||||||| ||| ||||||||||||||||||  ||||||||    
T  49198466 tcttgattgaataacacaagacttttttaaattga-aaagagtcttgattgaataccacaagac 49198528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 31572410 - 31572456
Alignment:
Q  102 tgaataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||    
T  31572410 tgaataccacaagactttttcatgataaaaaagtctcttaaaatccc 31572456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 10896882 - 10896845
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaat 43  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  10896882 aaaagtcttgattgaatacctaaagacttttttaaaat 10896845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 37014798 - 37014859
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||| |||||||| ||  ||||||||||||||||| |||||||  ||||||||    
T  37014798 ttgattgaataccacaagacttcttctaaatgacaaagagtcttaattgaataccacaagac 37014859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 45535990 - 45535925
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||| ||| ||||| || |||||||||||| | ||||||||||  ||||||||    
T  45535990 agtcttgattgaataccacaacactttgtttaaatgacaaagaatattgattgaataacacaagac 45535925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 47780574 - 47780529
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||    
T  47780574 attgaataccacaagactttttcatgataaaaaaatcttttaaaat 47780529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 47780757 - 47780692
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||| || ||||||||| |||||||| | | ||||||||||||  ||||||||    
T  47780757 agtcttgattgaataccacatgactttttttaaatgacatataatcttgattgaataacacaagac 47780692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 1928406 - 1928442
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| |||||||||||||||    
T  1928406 aaaagtcttgattgaatacctaaagacttttttaaaa 1928442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 36402329 - 36402293
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| |||||||||||||||    
T  36402329 aaaagtcttgattgaatacctaaagacttttttaaaa 36402293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 14494211 - 14494149
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaaga 73  Q
    ||||||||||||| | |||||||||||| ||||   ||||||||||||||||||  |||||||    
T  14494211 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaaga 14494149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 45535944 - 45535886
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaa 71  Q
    ||||||||||| | |||||||||||| ||||   |||||||||||||||||| ||||||    
T  45535944 ttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatatcacaa 45535886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 48524326 - 48524268
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    |||| ||||||||||||| | |||||||||||| ||||   ||||||||||||||||||    
T  48524326 aaaaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaat 48524268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 14555313 - 14555370
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||| || |||||||||||| | ||||||| || || |||||||||||||||||||    
T  14555313 aaaagtcttgattgaataccaccaaacttttttattataaaaaagtcttttaaaatcc 14555370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 21222227 - 21222170
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||| |||||||||| || |||  |||||||||||||||||  ||||||||    
T  21222227 ttgaatacctctagactttttttaagtgattaagagtcttgattgaataccacaagac 21222170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 42055175 - 42055114
Alignment:
Q  110 acaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||| ||  ||||||||| |||||||||| |||| |||||||||  ||||||||    
T  42055175 acaagacttttttatttttaaaaagttttttaaaatctcatataatcctaattcaatacacc 42055114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 43553618 - 43553537
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| ||||||| ||||||||||||||||| || || |||| |||| |||||||| | | ||||| ||||  ||||||||    
T  43553618 aaaagtcttaattgtataccacaagacttttttattatgaaaatgtctattaaaatctcttgaaatcttaattcaatacacc 43553537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 29208837 - 29208801
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  29208837 aaaagtcttgattgaatacctaaagacatttttaaaa 29208801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 32589073 - 32589129
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaaga 73  Q
    ||||||||| |||||||| ||| || |||  |||||||||||||||||| |||||||    
T  32589073 ttgaataccacaagacttcttttaagtgatgaagagtcttgattgaatgccacaaga 32589129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 33243312 - 33243348
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| || ||||||||||||    
T  33243312 aaaagtcttgattgaatacctaaaaacttttttaaaa 33243348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 33263485 - 33263521
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| || ||||||||||||    
T  33263485 aaaagtcttgattgaatacctaaaaacttttttaaaa 33263521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 42657795 - 42657763
Alignment:
Q  7 aaagtcttgattgaatacctcaagactttttta 39  Q
    ||||||||||||||||||| |||||||||||||    
T  42657795 aaagtcttgattgaataccacaagactttttta 42657763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 10621 - 10453
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  10621 tgatgagaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 10522  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10521 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 10453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 5e-59; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 4550402 - 4550570
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  4550402 tgatgaaaagtcttgattgaatacctcaagcctttgttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 4550501  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  4550502 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 4550570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 4240597 - 4240765
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||        |||||||||||||| || |    
T  4240597 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagattttttttaagttgcaaaaagtcttga 4240696  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  4240697 ttgaataccacaaaactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 4240765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 14000250 - 14000418
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||        || ||||||||||| || |    
T  14000250 tgatgaaaagtcttgattgaatacctcaagactttttaaaaatgacaaagagtcttgattgaataccacaagattttttttaaattgcaaaaagtcttga 14000349  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  14000350 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 14000418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 37013975 - 37013807
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  37013975 tgatgaaaagtcttgattgaatacctcaagactttttaaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 37013876  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||    
T  37013875 ttgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcataatccaataca 37013807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 22746358 - 22746190
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||       |||||||||||||| ||||    
T  22746358 tgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagttttgattgaataccacaagactttttttaagttgcaaaaagtcttaa 22746259  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    | ||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||| ||||||    
T  22746258 tcgaataccacaagactttttcataattaaaaagtcttttaaaattctatagaatcctaatccaataca 22746190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 1152248 - 1152416
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||| | || |    
T  1152248 tgataaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaaatcttga 1152347  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    || |||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  1152348 ttaaataccacaagattttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 1152416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 5949170 - 5949009
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  5949170 tgatgaaaaattttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagttttga 5949071  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatc 162  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||||||| ||||||||||    
T  5949070 ttgaataccacaaaaatttttcataattaaaaggtcttttaaaatcccatagaatcctaatc 5949009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 13925990 - 13925831
Alignment:
Q  3 atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaatt 102  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||       |||||||||||||| || |||    
T  13925990 atgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaaactttttttaagttgcaaaaagtcttgatt 13925891  T
Q  103 gaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatc 162  Q
     |||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  13925890 aaataccacaagactttttcataattaaaaaatcttttaaaatcctatagaatcctaatc 13925831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 40013847 - 40014012
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  40013847 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 40013946  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||  | |||||||||| ||||||    
T  40013947 ttgaatatcacaagactttttcataattaaaaa-tcttttaaaatccc--agaatcctaatccaataca 40014012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1461283 - 1461389
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||       |||||||||||||| ||||    
T  1461283 tgatgaaaagtcttgattgaatacctcaagacttttttaaaattacaaagagtcttgattgaataccacaagactatttttaagttgcaaaaagtcttaa 1461382  T
Q  101 ttgaata 107  Q
    |||||||    
T  1461383 ttgaata 1461389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 21147120 - 21146958
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  21147120 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 21147021  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||| ||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  21147020 cacacgactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 21146958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 33656194 - 33656358
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagag--tcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaat 106  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||  ||||||||||||  ||||||||       || ||| ||| ||| || |||||||    
T  33656194 agtcttgattgaataccacaagactttttttaaatgacaaaaagaatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaat 33656293  T
Q  107 accacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||||| || ||||| |||||||||||||| ||||||| | ||| ||||||||    
T  33656294 accacaagactttttcatgataaaaaaatcttttaaaatcccttaaaatcatgatccaatacacc 33656358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7947718 - 7947779
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattga 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7947718 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattga 7947779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 7948543 - 7948630
Alignment:
Q  82 aagttgcaaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||    
T  7948543 aagttgcaaaaagtcttgattgaataccacgagactttttcataataaaaaagtcttttaaaatcctatagaatcctaatccaataca 7948630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 145
Target Start/End: Original strand, 32158052 - 32158188
Alignment:
Q  10 gtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac-nnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||        || ||| ||| ||| || |||||||||    
T  32158052 gtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagacttttttttaaattgaaaagagtcttgattgaatac 32158151  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaat 145  Q
    |||||||||||||||| || |||||||||||||||||    
T  32158152 cacaagactttttcatgataaaaaagtcttttaaaat 32158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 6460845 - 6460706
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||  || ||||||||| |||||||||||| ||||||||||||  || |||||       |||||| ||| ||| || |||||||||    
T  6460845 agtcttgattgaatacgacatgactttttttaaatgacaaagaatcttgattgaataacataagactttttttaagttggaaagagtcttgattgaatac 6460746  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||||||||| || ||||| ||||||||||||||    
T  6460745 cacaagactttttcattataaaaaaatcttttaaaatccc 6460706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 139334 - 139191
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||| |||||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||  ||||| ||       || ||| ||| ||| || |    
T  139334 tgattaaaagtcttgattgaataccacatgactttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattgaaaagagtcttga 139235  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaa 144  Q
    |||||||| | ||||||||||||| || ||||||||||||||||    
T  139234 ttgaatactaaaagactttttcattataaaaaagtcttttaaaa 139191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 5273116 - 5273276
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatacca 110  Q
    ||||||||||||| | |||||||||||| |||||||||| | ||||||||||||  ||||||||       || ||| ||| | | || |||||||||||    
T  5273116 tcttgattgaatagcacaagactttttttaaatgacaaaaaatcttgattgaataacacaagactttttttaaattggaaagaatcttgattgaatacca 5273215  T
Q  111 caaga-ctttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacac 170  Q
    |||||  |||||||| || |||||||||||||||||||| ||||||| | ||| |||||||    
T  5273216 caagatttttttcatgataaaaaagtcttttaaaatcccttaaaatcatgatccaatacac 5273276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 7016858 - 7017012
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagac 116  Q
    ||||||||| | |||||||||| || |||  |||||||||||||||||   |||||||       || ||| ||| ||| || |||||||||||||||||    
T  7016858 ttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaagactttttttaaattgaaaagagtcttgattgaataccacaagac 7016957  T
Q  117 tttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  7016958 tttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 7017012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 27459102 - 27459240
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||  |||||||||||| |||||||||||| |||| |||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  27459102 agtcttgattgaatactacaagactttttttaaatgacaaagaatcttaattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 27459201  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
     || |||||||||||| || ||||||| |||||||||||    
T  27459202 tacgagactttttcatgataaaaaagttttttaaaatcc 27459240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 9689719 - 9689553
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||| ||||||||||||||||| | |   ||||||||| |||||| |||||||||||||||  || | |||       |||||| ||| ||| || |    
T  9689719 tgatgaagagtcttgattgaataccacgatgtttttttaaa-tgacaa-gagtcttgattgaataccagacgacttcttttaagttggaaagagtcttga 9689622  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacac 170  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||| || |||| ||||| |||||||    
T  9689621 ttgaataccacaagactttttcataa-taaaaagtctattaaaatcccttagaatcataatccaatacac 9689553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 14465373 - 14465494
Alignment:
Q  2 gatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaat 101  Q
    |||||| |||||||||||||||||  || |||||||| |||||||||||||||||||||||||  | | ||||       || ||| ||| ||| |||||    
T  14465373 gatgaagagtcttgattgaataccagaaaactttttttaaatgacaaagagtcttgattgaat-accccagactttttttaaattggaaagagttttaat 14465471  T
Q  102 tgaataccacaagactttttcat 124  Q
    |||||||||||||||||||||||    
T  14465472 tgaataccacaagactttttcat 14465494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 27786280 - 27786211
Alignment:
Q  102 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| | ||||| ||||| ||||||||    
T  27786280 tgaataccacaagacttttttataataaaaaagtcttttaaaatcccttgaaatcttaatccaatacacc 27786211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 28594454 - 28594526
Alignment:
Q  100 attgaataccacaagactttttcataattaaaa-agtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||||| | |||||||| |||||||||||||    
T  28594454 attgaataccacaagacttttttataataaaaaaagtcttttaaaatctcttaaaatcccaatcaaatacacc 28594526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 5273072 - 5273137
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||||||||||||||||  ||||||||||| |||||||||||| ||||||||||||  ||||||||    
T  5273072 agtcttgattgaataccataagactttttttaaatgacaaagaatcttgattgaatagcacaagac 5273137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 9220860 - 9220977
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||| | |||||||||||  |||||||||||||| |||||||||| ||| | |||       |||||||||| ||| || |||||||||    
T  9220860 agtcttgattgaatatcacaagactttttctaaatgacaaagagttttgattgaatatcatatgactttttttaagttgcaaatagtcttgattgaatac 9220959  T
Q  109 cacaagactttttcataa 126  Q
    |||| |||| ||| ||||    
T  9220960 cacacgactcttttataa 9220977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 26795635 - 26795693
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||| || |||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  26795635 aaaagtcttgattgaataccacaagatttttttataataaaaaagtcttttaaaatccc 26795693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 43319209 - 43319137
Alignment:
Q  100 attgaataccacaagactttttcataat-taaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||| || |||| | ||| ||||||||    
T  43319209 attgaataccacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 43319137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 1511596 - 1511643
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  1511596 attgaacaccacaagactttttcataataaaaatgtcttttaaaatcc 1511643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 9689348 - 9689419
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||| ||||| ||||| ||||||||||| |||||||||||| | | |||||  |||||||||||||    
T  9689348 attgaatacctcaagatttttttataattaaaaaatcttttaaaatctcttgaaatctaaatcaaatacacc 9689419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 26795514 - 26795569
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||| |||||||||    
T  26795514 aaaagttttgattgaataccacaagacttttttataatcaaaaagttttttaaaat 26795569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 26806578 - 26806633
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||| |||||||||    
T  26806578 aaaagtcttgattgaataccacaagacttttttataatcaaaaagttttttaaaat 26806633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 26806699 - 26806757
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||| || |||||||| ||||||| ||||| ||||| ||||||||||||||||||||    
T  26806699 aaaagtcttgattgaatatcacaagatttttttataataaaaaagtcttttaaaatccc 26806757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 7016892 - 7016957
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||  |||||||||||| ||||   ||||||||||||||||||  ||||||||    
T  7016892 agtcttgattgaatactacaagactttttttaaattgaaaagagtcttgattgaataccacaagac 7016957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 17518500 - 17518453
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||||||||||||||||||| | ||  |||||||||||||||||||    
T  17518500 attgaataccacaagacttttttaaaacgaaaaagtcttttaaaatcc 17518453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 9220837 - 9220883
Alignment:
Q  28 aagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||| || ||| |||||||||||||||||| |||||||||    
T  9220837 aagactttttttaagtgataaagagtcttgattgaatatcacaagac 9220883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 39852406 - 39852372
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttt 35  Q
    |||||| ||||||||||||||||||||||||||||    
T  39852406 tgatgagaagtcttgattgaatacctcaagacttt 39852372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 26806578 - 26806611
Alignment:
Q  6 aaaagtcttgattgaatacctcaagactttttta 39  Q
    |||||||||||||||||||| |||||||||||||    
T  26806578 aaaagtcttgattgaataccacaagactttttta 26806611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 16894055 - 16894119
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaaga 73  Q
    ||||||||||||||||| |||||||||||| ||||   ||||| | ||||||||||  |||||||    
T  16894055 agtcttgattgaataccacaagactttttttaaattggaaagaattttgattgaataccacaaga 16894119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 16894104 - 16894151
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||||||||| ||||| || || ||||||||||||||||||||    
T  16894104 attgaataccacaagaattttt-atgataaaaaagtcttttaaaatccc 16894151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 17518510 - 17518474
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  17518510 aaaaatcttgattgaataccacaagacttttttaaaa 17518474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 3e-57; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 23101353 - 23101192
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||| | || |    
T  23101353 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaattcttga 23101254  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatc 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23101253 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatc 23101192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 28342402 - 28342234
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||| | || |    
T  28342402 tgatgaaaagtctcgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaaatcttga 28342303  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  28342302 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 28342234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29614909 - 29615077
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  29614909 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 29615008  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||    
T  29615009 ttgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcataatccaataca 29615077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 33382692 - 33382524
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |       |||||||||||||| || |    
T  33382692 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaggctttttttaagttgcaaaaagtcttga 33382593  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  33382592 ttgaataccataagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatctaataca 33382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 39028152 - 39027984
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||        |||||||||||||| || |    
T  39028152 tgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagattttttttaagttgcaaaaagtcttga 39028053  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||    
T  39028052 ttgaataccacaagactttttcataattaaaaagtcttttaaaattctataaaatcctaatccaataca 39027984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 37327980 - 37327833
Alignment:
Q  3 atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaatt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |||    
T  37327980 atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgatt 37327881  T
Q  103 gaataccacaagactttttcataattaaaaagtcttttaaaatcccat 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37327880 gaataccacaagactttttcataattaaaaagtcttttaaaatcccat 37327833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 9882381 - 9882549
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||       || ||||||||||| || |    
T  9882381 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaaactttttttaaattgcaaaaagtcttga 9882480  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  9882481 ttgaataccataagactttttcataattaaaaagtcttttaaaatcctatagaatcctaatccaataca 9882549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 17001168 - 17001336
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  17001168 tgatgaaaagtctttattgaatacctcaagactttttaaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 17001267  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||    
T  17001268 ttgaataccacaagactttttcataattaaaaagttttttaaaatctcatagaatcctaatccaataca 17001336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 39784154 - 39783986
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  39784154 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttga 39784055  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||| ||||||    
T  39784054 ttgaataccacatgactttttcataattaaaaagtcttttaaaatcccatagaatctcaatccaataca 39783986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 41827367 - 41827201
Alignment:
Q  3 atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaatt 102  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||  ||||||||       |||||||||||| | || |||    
T  41827367 atgaaaagtcttgattgaacacctcaagatttttttaaaatgacaaaaagtcttgattgaataccacaagactttttttaagttgcaaaaattcttgatt 41827268  T
Q  103 gaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  41827267 gaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaattctaatccaataca 41827201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 7993197 - 7993029
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||       |||||||||||||| || |    
T  7993197 tgatgaaaagttttgattgaatacctcaagacttttttaaaatggcaaagagtcttgattgaataccacgagactttttttaagttgcaaaaagtcttga 7993098  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||    
T  7993097 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcctatagaatcttaatccaataca 7993029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 48117746 - 48117906
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |||||||||    
T  48117746 agtcttgattgaatacctcaagacttttcaaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaatac 48117845  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||    
T  48117846 cacaagactttttcataattaaaaagtcttttaaaatcccatagaatactaatccaataca 48117906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 18838443 - 18838276
Alignment:
Q  2 gatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |        |||||||||||||| || ||    
T  18838443 gatgaaaagtcttgattgaatacctcaagacttttttaaaattacaaagagtcttgattgaataccacaatattttttttaagttgcaaaaagtcttgat 18838344  T
Q  102 tgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  18838343 tgaataccacaagacattttcataattaaaaagtcttttataatcccatagaatcctaatccaataca 18838276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 46405576 - 46405742
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | |||||        |||||||||||||| || |    
T  46405576 tgatgaaaagtcttgattgaatacctcaagacttttttaaaacgacaaagagtcttgattgaataccgcaagattttttttaagttgcaaaaagtcttga 46405675  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaata 167  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  46405676 ttgaataccacatgactttttcataattaaaaagtcttttaaaattccatagaatcctaatccaata 46405742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 40460852 - 40461002
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||       || ||||||||||| || |    
T  40460852 tgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaagagtcttaattgaatatcacaagacattttttaaattgcaaaaagtcttga 40460951  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccata 151  Q
    || |||||||||| |||||||||||||||||||||||||||||||| ||||    
T  40460952 ttaaataccacaaaactttttcataattaaaaagtcttttaaaatctcata 40461002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 19251594 - 19251433
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||| ||| || |    
T  19251594 tgatgaaaaattttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaagagtcttga 19251495  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatc 162  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||| | || ||||||||||    
T  19251494 ttgaatactacaagactttttcgtaattaaaaagtcttttaaaatctcttagaatcctaatc 19251433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 12740428 - 12740266
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||       |||||||||||||| ||||    
T  12740428 tgatgaaaaatcttgattaaatacctcaagactttttaaaaatgacaaagaatcttgattgaataccacaagactttttttaagttgcaaaaagtcttaa 12740329  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatca 163  Q
    || |||| ||| ||| |||||||||||||||||||||||||||||| |||| |||||||||||    
T  12740328 ttaaatatcaccagattttttcataattaaaaagtcttttaaaatctcatagaatcctaatca 12740266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 12963754 - 12963589
Alignment:
Q  3 atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaatt 102  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||| ||| || |||    
T  12963754 atgaaaaatcttgattgaatatctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaagagtcttgatt 12963655  T
Q  103 gaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    || ||||||||||||||||| ||||||||||||||||||||||| | || |||||||||| ||||||    
T  12963654 gagtaccacaagactttttcgtaattaaaaagtcttttaaaatctc-tagaatcctaatccaataca 12963589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28034950 - 28035111
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||  ||||||||       |||||||||||| | ||||    
T  28034950 tgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaaaagtcttgattgaataccacaagac-ttttttaagttgcaaaaaatcttaa 28035048  T
Q  101 ttgaataccacaagactttttcataatt-aaaaagtcttttaaaatcccataaaatcctaatc 162  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||| ||||| ||||||||||    
T  28035049 ttgaataccacaaaactttttaataattaaaaaagtcttttaaaattccatagaatcctaatc 28035111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 32883837 - 32883668
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtatta- 99  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||  || |||||       |||||||||||||| |||     
T  32883837 tgatgaaaagtcttaattgaatacttcaagacttttttaaaatgacaaaaagtcttgattgaataccataagactttttttaagttgcaaaaagtcttag 32883738  T
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||| ||||||    
T  32883737 attgaatatcacaaaactttttcataattaaaaaatcttttaaaatcccatagaatcataatccaataca 32883668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 3022981 - 3022821
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||       |||||  ||||||| || |    
T  3022981 tgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaaaagtcttgattgaataccacaagactttttttaagttttaaaaagtcttga 3022882  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaat 161  Q
    || ||||||| || ||||||||||||||||||| ||||||||||||||||| |||||||||    
T  3022881 ttaaataccataaaactttttcataattaaaaaatcttttaaaatcccatagaatcctaat 3022821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 44122045 - 44122220
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagt-atta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||          |||||||||||| |  ||     
T  44122045 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaatttttttttaagttgcaaaaaatctttg 44122144  T
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacctctt 175  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||| ||| ||| |||||| |||||| |||||    
T  44122145 attgaataccacaatactttttcataattaaaaaatcttttaaaatcctatagaattctaatccaatacatctctt 44122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 3797202 - 3797346
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||       || ||||||| ||| || |    
T  3797202 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatatcagatgactttttttaaattgcaaagagtcttga 3797301  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||    
T  3797302 ttgaatacctcaaaactatttcataattaaaaagtcttttaaaat 3797346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 10068522 - 10068375
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaa-gacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtatta 99  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||  ||||||||       || ||||||| ||| ||     
T  10068522 tgatgaaaaatcttgattgaatacctcaaagacttttttaaaatggcaaagagtcttgattaaataccacaagactttttttaaattgcaaagagttttg 10068423  T
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  10068422 attgaatatcacaagactttttcataattaaaaagtcttttaaaatcc 10068375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 33892395 - 33892564
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaaga--cnnnnnnnaagttgcaaaaagtatt 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |  ||||          || ||||||||| | ||    
T  33892395 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtgttgattgaat-acctaagaatttttttttaaattgcaaaaaatttt 33892493  T
Q  99 aattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
     |||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  33892494 gattgaataccacaaaactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 33892564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 44256911 - 44257077
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| |||   |||||||       | |||||||||||| || |    
T  44256911 tgatgaaaagtcttgattgaataccttaagatttttttaaaatgacaaaaagtcttgattaaatactacaagacttttttaaggttgcaaaaagtcttga 44257010  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaata 167  Q
    ||||||||||||  ||||||||||||||||||| | |||||||||| |||  |||||||||| ||||    
T  44257011 ttgaataccacagaactttttcataattaaaaacttttttaaaatctcatcgaatcctaatccaata 44257077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 509737 - 509585
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagac 116  Q
    ||||||||| |||||||||||| ||||||  || ||||||||||||||  | ||||||       || |  |||| ||| || |||||||||||||||||    
T  509737 ttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaatagtcttgattgaataccacaagac 509638  T
Q  117 tttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  509637 tttttcataattaaaaagtcttttaaaatcccataaaatcctaatccaataca 509585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 44343549 - 44343711
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||| | |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  44343549 agtcttgattgaatatcacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 44343648  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  44343649 cacaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 44343711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 47879222 - 47879083
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| |||||| |||||||||    
T  47879222 agtcttgattgaataccacatgactttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaaattgaaaagagtattgattgaatac 47879123  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||||||||| || || |||||||||||||||||    
T  47879122 cacaagactttttcattataaataagtcttttaaaatccc 47879083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 47914320 - 47914181
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| |||||| |||||||||    
T  47914320 agtcttgattgaataccacatgactttttttaaatgacaaagaatcttgattgaataacacaagacttttttaaaattgaaaagagtattgattgaatac 47914221  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||||||||| || || |||||||||||||||||    
T  47914220 cacaagactttttcattataaataagtcttttaaaatccc 47914181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 30440850 - 30440688
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  30440850 agtcttgattgaataccacaagattttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 30440751  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||| |||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  30440750 cacaagattttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 30440688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 21067856 - 21067769
Alignment:
Q  82 aagttgcaaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| ||||||    
T  21067856 aagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaaatcttttaaaatctcatagaatcctaatccaataca 21067769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 43581243 - 43581379
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||  |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  43581243 agtcttgattgaatacaacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 43581342  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaat 145  Q
    |||||||||||||||| || |||||||||||||||||    
T  43581343 cacaagactttttcatgataaaaaagtcttttaaaat 43581379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 18914888 - 18915027
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| ||| |||||||| | ||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  18914888 agtcttgattgaataccacaagactttttttaaaggacaaagaattttgattgaataacacaagacttttttaaaattggaaagagtcttgattgaatac 18914987  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatccc 148  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  18914988 cacaagactttttcatgataaaaaagtcttttaaaatccc 18915027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 509711 - 509638
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  509711 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaatagtcttgattgaataccacaagac 509638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 34695283 - 34695146
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatacca 110  Q
    ||||||||||||| | |||||||||||| ||||   ||||||||||||||||||  ||||||||       || ||| ||| ||| || |||||||||||    
T  34695283 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaataccacaagactttttttaaattggaaagagtcttgattgaatacca 34695184  T
Q  111 caagactttttcataattaaaaagtcttttaaaatccc 148  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  34695183 caagactttttcataataaaaaagtcttttaaaatccc 34695146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 973238 - 973075
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||||| ||       || ||| ||| ||| || |||||||||    
T  973238 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaaaactttttttaaattggaaagagtcttgattgaatac 973139  T
Q  109 cacaagactttttcataat-taaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| ||  ||||| |||||||||||||| || |||| | ||| ||||||||    
T  973138 cacaagactttttcatgataaaaaaaatcttttaaaatcccttagaatcatgatccaatacacc 973075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8675388 - 8675326
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaa 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8675388 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagttttgattgaa 8675326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 12893462 - 12893300
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    |||||||||| |||||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  12893462 agtcttgattaaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 12893363  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||||| |  ||||| ||||||||||| || || |||| | ||| ||||||||    
T  12893362 cacaagactttttcatgaaaaaaaaatcttttaaaataccttagaatcatgatccaatacacc 12893300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 29893079 - 29893010
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  29893079 attgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatctaataca 29893010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29893136 - 29893063
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||  ||||||||    
T  29893136 tgatgaaaagtcttgattgaatacctcatgactgttttaaaatgacaaagagtcttgattgaataccacaagac 29893063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 37973000 - 37973087
Alignment:
Q  82 aagttgcaaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||| ||||||| || |||||||||||||||||| ||||||||||||||||| |||||||||| |||| |||||||||| ||||||    
T  37973000 aagttgtaaaaagtcttgattgaataccacaagactctttcataattaaaaagtattttaaaatctcatagaatcctaatccaataca 37973087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 20275416 - 20275577
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    |||||||||||||||||  ||||||||||| ||||||||| || ||||||||||||  | ||||||       || ||| ||| | | || |||||||||    
T  20275416 agtcttgattgaataccataagactttttttaaatgacaaggaatcttgattgaataacccaagactttttttaaattggaaagaatcttgattgaatac 20275515  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacac 170  Q
    |||||||||| ||||| || |||||||||||||||||||| || |||| | ||| |||||||    
T  20275516 cacaagacttattcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacac 20275577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 29585565 - 29585507
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29585565 aaaagttttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattgaat 29585507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 40996802 - 40996965
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||  ||| ||||       || ||| ||| ||| || |||||||||    
T  40996802 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacgagactttttttaaattggaaagagtcttgattgaatac 40996901  T
Q  109 cacaagactttttcataat-taaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||| |||||| ||  ||||| | |||||||||||| || |||| | ||| ||||||||    
T  40996902 cacaagactctttcatgataaaaaaaatattttaaaatcccttagaatcatgatccaatacacc 40996965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 43187518 - 43187633
Alignment:
Q  31 acttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagactttttcataattaa 130  Q
    ||||||||||||||||||||||| || |||||||  || |||||       || || |||| ||| || |||||||||||||||||| ||||||||||||    
T  43187518 acttttttaaaatgacaaagagttttaattgaataccataagactttttttaaattacaaagagtcttgattgaataccacaagactctttcataattaa 43187617  T
Q  131 aaagtcttttaaaatc 146  Q
    ||||||||||||||||    
T  43187618 aaagtcttttaaaatc 43187633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44623421 - 44623491
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaa 71  Q
    ||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  44623421 tgatgaagagtcttgattaaataccacaagactttttttaaatgacaaagagtcttgattgaatatcacaa 44623491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 47066701 - 47066631
Alignment:
Q  100 attgaataccacaagacttttt-cataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  47066701 attgaataccacaagacttttttcataattaaaaagtctttttaaatcccatagaatcctaatccaataca 47066631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 727562 - 727428
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccaca 112  Q
    ||||||||||| | |||||||||||| |||||||||||| | ||||||||||  ||||||||       || ||| ||| ||| || |||||||||| ||    
T  727562 ttgattgaatatcacaagactttttttaaatgacaaagaattttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaataccgca 727463  T
Q  113 agactttttcataattaaaaagtcttttaaaatcc 147  Q
    |||||||||||| || |||||||| ||||||||||    
T  727462 agactttttcatgataaaaaagtcatttaaaatcc 727428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 7719413 - 7719551
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagt-attaattgaata 107  Q
    ||||||||||||||||| |||||||||||| |||||||||| | | ||||||||||  ||||||||       || ||| ||| |||  || ||||||||    
T  7719413 agtcttgattgaataccacaagactttttttaaatgacaaataatattgattgaataacacaagactttttttaaattggaaagagtctttgattgaata 7719512  T
Q  108 ccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    |||||||| |||||||| || ||||||||||||||||||    
T  7719513 ccacaagaatttttcatgataaaaaagtcttttaaaatc 7719551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 10676551 - 10676684
Alignment:
Q  29 agacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagactttttcataatt 128  Q
    |||||||||| || |||  || ||||||||||||||  ||||||||       || ||||||| ||| || ||| |||||||||||| ||||||||||||    
T  10676551 agactttttttaagtgatgaaaagtcttgattgaataccacaagaccttttttaaattgcaaagagtcttgattaaataccacaagattttttcataatt 10676650  T
Q  129 aaaaagtcttttaaaatcccataaaatcctaatc 162  Q
    |||||||||||||||||||| || || |||||||    
T  10676651 aaaaagtcttttaaaatcccttagaaacctaatc 10676684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 34009062 - 34008907
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccaca 112  Q
    ||||||||||||| |||||||||||| |||||||||| | ||||||||||||  ||||||||       || ||| ||| ||| || ||||||||||       
T  34009062 ttgattgaataccacaagactttttttaaatgacaaataatcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatacc--- 34008966  T
Q  113 agactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||| || ||||| |||||||||||||| || |||| | ||| ||||||||    
T  34008965 agactttttcatgataaaaaaatcttttaaaatcccttagaatcatgatccaatacacc 34008907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 8078450 - 8078287
Alignment:
Q  9 agtcttgattgaatacctcaagact-tttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaata 107  Q
    ||||||||||||||||| ||||| | ||||| |||||||||||| ||||||||||||  |||||          || ||| ||| ||| || ||||||||    
T  8078450 agtcttgattgaataccacaagattcttttttaaatgacaaagaatcttgattgaataacacaaattttttttaaaattggaaagagtcttgattgaata 8078351  T
Q  108 ccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||||||||||| || || |||||||||||||||||||| || |||| | ||| ||||||||    
T  8078350 ccacaagacttttttatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 8078287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 47066746 - 47066685
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  47066746 ttgattgaatacgtcaagacttttttaaaatgacaaagagttttgattgaataccacaagac 47066685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 31638929 - 31638792
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||| ||||||| ||  | |||||| |||||||||||| | ||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  31638929 agtcttgatagaataccacacaagtttttttaaatgacaaagaattttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaatac 31638830  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    |||| ||||||||||| || ||||||||||||||||||    
T  31638829 cacatgactttttcatgataaaaaagtcttttaaaatc 31638792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 9179935 - 9179768
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||| ||||||||||||||||  ||| |||||||| |||||||||||| |||||||||||| | ||||          |||||||||| ||   | |    
T  9179935 tgatgaagagtcttgattgaatacgacaaaactttttttaaatgacaaagaatcttgattgaatattacaaatttttgtttaagttgcaaagag---tca 9179839  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    | ||||| |||||||||||||||| || ||||||||||||||||||   || ||| |||||| ||||||||    
T  9179838 tcgaatatcacaagactttttcatgataaaaaagtcttttaaaatcttttagaatgctaatccaatacacc 9179768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 34695327 - 34695215
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||| ||| |||||||| ||||||||| || ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  34695327 agtcttgattgaataccacaaaactttttttaaatgacaaggaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 34695228  T
Q  109 cacaagacttttt 121  Q
    |||||||||||||    
T  34695227 cacaagacttttt 34695215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 3634295 - 3634214
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| || |||||||| ||||||||||||| ||||| ||||||||||||||||||||   |||||| |||| ||||||||    
T  3634295 aaaagtcttgattgaatatcacaagacttttttataataaaaaagtcttttaaaatccctagaaatccgaatccaatacacc 3634214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10676565 - 10676637
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaaga 73  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||  ||||||||||||||| |||  |||||||    
T  10676565 tgatgaaaagtcttgattgaataccacaagaccttttttaaattgcaaagagtcttgattaaataccacaaga 10676637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 29585513 - 29585467
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  29585513 attgaataccacaaaactttttcataattaaaaaatcttttaaaatc 29585467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 32143072 - 32143238
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    |||||||||| ||||||  ||||||||||| |||||||||| |   || |||||||  ||||||||       || ||  ||| ||| || ||||||||     
T  32143072 agtcttgattcaataccataagactttttttaaatgacaaaaaaaatttattgaataacacaagactttttttaaattagaaagagtcttgattgaatat 32143171  T
Q  109 cacaagactttttcataattaaaa-agtcttttaaaatcccataaaatcctaatcaaatacacctct 174  Q
    |||||||||||||||| || |||| |||||||||||||||| || |||| | ||| |||||||||||    
T  32143172 cacaagactttttcatgataaaaaaagtcttttaaaatcccttagaatcatgatccaatacacctct 32143238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 34695243 - 34695178
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||| |||||||||||| ||||   ||||||||||||||||||  ||||||||    
T  34695243 agtcttgattgaataccacaagactttttttaaattggaaagagtcttgattgaataccacaagac 34695178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 39219579 - 39219624
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaat 145  Q
    ||||||||||||||||||||||||| || |||||||||||||||||    
T  39219579 attgaataccacaagactttttcatgataaaaaagtcttttaaaat 39219624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 21066864 - 21066800
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaa 154  Q
    |||||| || |||||||||||||| ||||||| ||  ||||||||||||||||||| ||||||||    
T  21066864 aaaagtcttgattgaataccacaaaacttttttatttttaaaaagtcttttaaaattccataaaa 21066800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25805747 - 25805675
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaaga 73  Q
    ||||||||| | ||||||||||||| | ||| |||||| |||| ||||||| ||||||||||||| |||||||    
T  25805747 tgatgaaaaattttgattgaataccactagattttttttaaattacaaagaatcttgattgaatgccacaaga 25805675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 43187545 - 43187603
Alignment:
Q  16 attgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||  ||||||||||| |||| ||||||||||||||||||||  ||||||||    
T  43187545 attgaataccataagactttttttaaattacaaagagtcttgattgaataccacaagac 43187603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 47915066 - 47915140
Alignment:
Q  97 ttaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||||||||| || |||||  |||| ||||||||    
T  47915066 ttaattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctatgaaatctcaatccaatacacc 47915140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10617003 - 10616955
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 49  Q
    ||||| ||| ||||||| ||||||||||||||||||| |||||||||||    
T  10617003 tgatggaaaatcttgatcgaatacctcaagactttttaaaaatgacaaa 10616955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 34115475 - 34115531
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    |||||| || ||||||||| |||||| ||||| || |||||||||||||||||||||    
T  34115475 aaaagtcttgattgaatactacaagatttttttatcattaaaaagtcttttaaaatc 34115531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 40097176 - 40097140
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||||||||||| |||||||||||||||    
T  40097176 aaaagtcttgattgaatacctaaagacttttttaaaa 40097140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 42678196 - 42678252
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatc 146  Q
    |||||| ||||||||||| ||| ||| ||||| || |||||||||||||||||||||    
T  42678196 aaaagtcttaattgaatatcaccagatttttttatcattaaaaagtcttttaaaatc 42678252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 48399799 - 48399743
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatc 156  Q
    ||||| |||||||||| ||||| ||  |||||||||||||||||||| |||||||||    
T  48399799 attgattaccacaagatttttttatttttaaaaagtcttttaaaatctcataaaatc 48399743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1470377 - 1470440
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||| |  |||||||| | |||||||||||| |||||||||| |||||| |||||||    
T  1470377 tgatgaaaagtttatattgaatatcacaagactttttttaaatgacaaatagtcttaattgaat 1470440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 43679433 - 43679363
Alignment:
Q  100 attgaataccacaagactttttcataat-taaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||| ||  ||||| |||||||||||||| || |||| | ||| ||||||    
T  43679433 attgaataccacaagactttttcatgataaaaaaaatcttttaaaatcccttagaatcatgatccaataca 43679363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 9599077 - 9599134
Alignment:
Q  100 attgaataccacaagactttttcataatt-aaaaagtcttttaaaatcccataaaatc 156  Q
    ||||||||| |||||||||||| |||||| ||||||| |||||||||| | |||||||    
T  9599077 attgaatactacaagacttttttataattaaaaaagttttttaaaatctcttaaaatc 9599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 9826648 - 9826705
Alignment:
Q  100 attgaataccacaagactttttcataatt-aaaaagtcttttaaaatcccataaaatc 156  Q
    ||||||||| |||||||||||| |||||| ||||||| |||||||||| | |||||||    
T  9826648 attgaatactacaagacttttttataattaaaaaagttttttaaaatctcttaaaatc 9826705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 34009022 - 34008969
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||||| | |||||||||||| ||||   ||||||||||||||||||    
T  34009022 tcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaat 34008969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 39301247 - 39301283
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaa 42  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  39301247 aaaagtcttgattaaatacctaaagacttttttaaaa 39301283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 46037352 - 46037412
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccat 150  Q
    |||||| || |||||||| ||| | ||||||| || || ||||||||||||||||||||||    
T  46037352 aaaagtcttgattgaatatcactaaactttttaattataaaaaagtcttttaaaatcccat 46037412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 924 - 756
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || |    
T  924 tgatgaaaagtcttgattgaatacctcatgatttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttga 825  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  824 ttgaataccacaagaatttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4261 - 4093
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||       || ||||||||||| || |    
T  4261 tgatgaaaagtcttgattgaatacctcaagacttttttaaaattacaaagagtcttgattgaataccacaagactttttttaatttgcaaaaagtcttga 4162  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||    
T  4161 ttgaataccacaagactttttcaaaattaaaaagtcttttaaaatcctatagaatcctaatccaataca 4093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 39763 - 39918
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaa 100  Q
    ||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||||||||||  ||||| ||       |||||| ||||||| || |    
T  39763 tgatgaaaaatcttgattgaatagttcaagactttttaaaaatgacaaagagtcttgattgaataccacaaaactttttttaagttgtaaaaagtcttga 39862  T
Q  101 ttgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatc 156  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  39863 ttgaataccacaagactttttcataattaaaaggtcttttaaaatctcatagaatc 39918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 58261 - 58348
Alignment:
Q  82 aagttgcaaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  58261 aagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatcccatggaatcctaatccaataca 58348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 58228 - 58295
Alignment:
Q  6 aaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||| |||||||| ||||||||||||||  || |||| ||||||||||||||  ||||||||    
T  58228 aaaagtcttgactgaataccacaagacttttttaagttg-caaaaagtcttgattgaataccacaagac 58295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 14875 - 14788
Alignment:
Q  82 aagttgcaaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| ||||||    
T  14875 aagttgcaaaaagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatccaaatccaataca 14788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13943 - 13870
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  13943 tgatgaaaagtcttgattgaatacctcaatacttttttaaaatgacaaagagtcttgattgaataccacaagac 13870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 13886 - 13817
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  13886 attgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 13817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21384 - 21457
Alignment:
Q  1 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  21384 tgatgaaaagtcttgattgaatacctcaatacttttttaaaatgacaaagagtcttgattgaataccacaagac 21457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 21441 - 21510
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  21441 attgaataccacaagactttttcataattaaaaagtcttttaaaatctcatagaatcctaatccaataca 21510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 62; Significance: 8e-27; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 233795 - 233685
Alignment:
Q  4 tgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattg 103  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || ||||    
T  233795 tgaaaagttttgattgaagaccttaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttctaagttgcaaaaagtcttgattg 233696  T
Q  104 aataccacaag 114  Q
    |||||||||||    
T  233695 aataccacaag 233685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 234643 - 234533
Alignment:
Q  4 tgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattg 103  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||       |||||||||||||| || ||||    
T  234643 tgaaaagttttgattgaagaccttaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttctaagttgcaaaaagtcttgattg 234544  T
Q  104 aataccacaag 114  Q
    |||||||||||    
T  234543 aataccacaag 234533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 222627 - 222517
Alignment:
Q  4 tgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattg 103  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||||||| ||||||||||  ||||||||        ||||||||||||| || ||||    
T  222627 tgaaaagttttgattgaagaccttaagacttttttaaaatgacaaagagttttgattgaataccacaagactttttcttagttgcaaaaagttttgattg 222528  T
Q  104 aataccacaag 114  Q
    |||||||||||    
T  222527 aataccacaag 222517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 100264 - 100102
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    |||||||||||| |||| |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| |||  || || ||||||||     
T  100264 agtcttgattgagtaccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagtgtgttgattgaatat 100165  T
Q  109 cacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    || ||||||||||||| || |||||||||||||||||||| || |||| | ||| ||||||||    
T  100164 cagaagactttttcatgataaaaaagtcttttaaaatcccttagaatcatgatccaatacacc 100102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 15187 - 15320
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||  |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  15187 agtcttgattgaatactacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 15286  T
Q  109 cacaagactttttcataattaaaaagtcttttaa 142  Q
    ||||||| |||||||| || ||||||||||||||    
T  15287 cacaagattttttcatgataaaaaagtcttttaa 15320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 15830 - 15963
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaatac 108  Q
    ||||||||||||||||  |||||||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||    
T  15830 agtcttgattgaatactacaagactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaatac 15929  T
Q  109 cacaagactttttcataattaaaaagtcttttaa 142  Q
    ||||||| |||||||| || ||||||||||||||    
T  15930 cacaagattttttcatgataaaaaagtcttttaa 15963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 37068 - 37130
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatc 162  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37068 attgaatagcacaagactttttcataattaaaaagtcttttaaaatcccatataatcctaatc 37130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 37027 - 37084
Alignment:
Q  17 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  37027 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatagcacaagac 37084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 12030 - 12087
Alignment:
Q  112 aagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  12030 aagactttttcataattaaaaagtcttttaaaatcccatagaatcctaatccaataca 12087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 12056 - 11999
Alignment:
Q  112 aagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaataca 169  Q
    |||||||||| || || ||||||||||||||||||||||| |||||||||| ||||||    
T  12056 aagactttttaattatgaaaaagtcttttaaaatcccatagaatcctaatccaataca 11999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 8793 - 8654
Alignment:
Q  31 acttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccacaagactttttcataattaa 130  Q
    |||||||| |||||||||||| |||||||| |||  ||||||||       || ||| ||||||| || |||||||||||||| |||||||||| || ||    
T  8793 actttttttaaatgacaaagaatcttgattaaataacacaagactttttttaaattgaaaaaagtcttgattgaataccacaatactttttcatgataaa 8694  T
Q  131 aaagtcttttaaaatcccataaaatcctaatcaaatacac 170  Q
    ||| |||||||||||||| || |||| | ||| |||||||    
T  8693 aaaatcttttaaaatcccttagaatcatgatccaatacac 8654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 697 - 806
Alignment:
Q  13 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagacnnnnnnnaagttgcaaaaagtattaattgaataccaca 112  Q
    ||||||||||||| ||| |||||||| |||||||||||| ||||||||||||  ||||||||       || ||| ||| ||| || |||||||||||||    
T  697 ttgattgaataccacaatactttttttaaatgacaaagaatcttgattgaataacacaagactttttttaaattgtaaagagtcttgattgaataccaca 796  T
Q  113 agactttttc 122  Q
    ||||||||||    
T  797 agactttttc 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 737 - 800
Alignment:
Q  11 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    ||||||||||||| | |||||||||||| ||||   ||||||||||||||||||  ||||||||    
T  737 tcttgattgaataacacaagactttttttaaattgtaaagagtcttgattgaataccacaagac 800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 11790 - 11871
Alignment:
Q  90 aaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    |||||| || |||||||| ||||||||||||| ||||| ||||||||||||||||||||   |||||| |||| ||||||||    
T  11790 aaaagtcttgattgaatatcacaagacttttttataataaaaaagtcttttaaaatccctagaaatccgaatccaatacacc 11871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 39098 - 39145
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcc 147  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||    
T  39098 attgaataccacaagactttttcatgataaaaaagtcttttaaaatcc 39145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 39049 - 39114
Alignment:
Q  9 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatgtcacaagac 74  Q
    |||||| |||||||||| |||||||||||| |||||| ||||| ||||||||||||  ||||||||    
T  39049 agtctttattgaataccacaagactttttttaaatgataaagaatcttgattgaataccacaagac 39114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 38765 - 38836
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
    ||||||||||||||||||||||||| || ||||  |||||||||||||| || |||| | ||| ||||||||    
T  38765 attgaataccacaagactttttcatgataaaaatatcttttaaaatcccttagaatcatgatccaatacacc 38836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 199804 - 199730
Alignment:
Q  82 aagttgcaaaaagtattaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatc 156  Q
    ||||| |||| ||| ||||||| ||||||||||||||||| ||| | ||||| |||||| ||||||| |||||||    
T  199804 aagttacaaagagtcttaattggataccacaagactttttaatactaaaaaactcttttgaaatcccttaaaatc 199730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 102148 - 102091
Alignment:
Q  9 agtcttgattgaatacctcaagact--tttttaaaatgacaaagagtcttgattgaat 64  Q
    ||||||||||||||||| |||||||  ||||| |||||||||||| ||||||||||||    
T  102148 agtcttgattgaataccacaagactctttttttaaatgacaaagaatcttgattgaat 102091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 1894 - 1953
Alignment:
Q  97 ttaattgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatc 156  Q
    ||||||||||||||| | | ||||| || ||||||||||||||||||||| | |||||||    
T  1894 ttaattgaataccaccaaatttttttattattaaaaagtcttttaaaatctcttaaaatc 1953  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 81794 - 81865
Alignment:
Q  100 attgaataccacaagactttttcataattaaaaagtcttttaaaatcccataaaatcctaatcaaatacacc 171  Q
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T  81794 attgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttaaaatctcaatccaatacacc 81865  T

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