View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3025_high_9 (Length: 473)
Name: NF3025_high_9
Description: NF3025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3025_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 419; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 12 - 454
Target Start/End: Original strand, 26284353 - 26284795
Alignment:
| Q |
12 |
atgaaccattttattggaaatgctgtggaagaattgaaactagtgagggaaaaagaaacaagagtgttgcagattcttagtaaaacaaaacagtattatg |
111 |
Q |
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| T |
26284353 |
atgaaccattttattggaaatgctgcggaagaattgaaactagtgagggaaaaagaaacaagtgtgttgcagattcttagtaaaacaaaacagtattatg |
26284452 |
T |
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| Q |
112 |
aatgtgggggttcaaaagagaaagaagaaaataatcttcaattatttggtatagttaaggatttcttgggaatggttgatcaggtttgcattgaaattgc |
211 |
Q |
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| T |
26284453 |
aatgtgggggttcaaaagagaaagaagaaaataatcttcaactatggggtatagttaaggatttcttgggaatggttgatcaggtttgcattgaaattgc |
26284552 |
T |
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| Q |
212 |
acttgacatgcagaagaagaatcctaagaggtatcagaacaaataagtcctgagattttcaaaaaatgttgttggaacatacaatgtcatataactctag |
311 |
Q |
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| T |
26284553 |
acttgacatgcagaagaagaatcctaagaggtatcagaacaaataagtcctgagattttcaaaaaatgttgttggaacatacaatgtcatataactctag |
26284652 |
T |
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| Q |
312 |
aaatggccaaagtgattcaactattgctagagttttgttgtttggatcaaagccttgggacctcttcggattggcttatttgaggttatttactgccaca |
411 |
Q |
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| T |
26284653 |
aaatggccaaagtgattcaactattgctagagttttgttgtttggatcaaagccttgggacctcttcggattggcttatttgaggttatttactgccaca |
26284752 |
T |
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| Q |
412 |
aacacctatgaactatttgaaggaacctacagaaacagcctat |
454 |
Q |
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| T |
26284753 |
aacacctatgaactatttgaaggaacctacagaaacggcctat |
26284795 |
T |
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