View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3025_low_4 (Length: 558)

Name: NF3025_low_4
Description: NF3025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3025_low_4
NF3025_low_4
[»] chr8 (14 HSPs)
chr8 (184-348)||(17683697-17683861)
chr8 (184-348)||(17664541-17664705)
chr8 (203-348)||(39837482-39837627)
chr8 (214-350)||(4839713-4839849)
chr8 (213-348)||(17973565-17973700)
chr8 (219-349)||(39845541-39845671)
chr8 (203-348)||(30938282-30938427)
chr8 (213-348)||(25579742-25579877)
chr8 (203-348)||(1406993-1407138)
chr8 (220-348)||(26873541-26873669)
chr8 (220-348)||(26875991-26876119)
chr8 (36-87)||(17664393-17664444)
chr8 (36-87)||(17683549-17683600)
chr8 (254-348)||(4582204-4582298)
[»] chr2 (24 HSPs)
chr2 (184-350)||(20372214-20372380)
chr2 (184-348)||(20621518-20621682)
chr2 (203-348)||(14582925-14583070)
chr2 (203-348)||(15944477-15944622)
chr2 (203-348)||(15952992-15953137)
chr2 (203-348)||(35138593-35138738)
chr2 (203-348)||(35146929-35147074)
chr2 (203-348)||(41233764-41233909)
chr2 (203-348)||(38168277-38168422)
chr2 (203-348)||(42565849-42565994)
chr2 (203-348)||(42574473-42574618)
chr2 (203-320)||(35037884-35038001)
chr2 (239-348)||(44372705-44372814)
chr2 (239-348)||(44388616-44388725)
chr2 (254-348)||(17687369-17687463)
chr2 (237-348)||(25483601-25483712)
chr2 (237-348)||(25491207-25491318)
chr2 (36-87)||(20621788-20621839)
chr2 (223-348)||(35303737-35303862)
chr2 (254-349)||(27606616-27606710)
chr2 (254-348)||(24285696-24285790)
chr2 (254-348)||(42249426-42249520)
chr2 (222-299)||(18989312-18989389)
chr2 (254-348)||(34070575-34070669)
[»] chr5 (20 HSPs)
chr5 (348-542)||(22042553-22042746)
chr5 (202-348)||(29186197-29186343)
chr5 (213-349)||(20398565-20398701)
chr5 (213-348)||(20372843-20372978)
chr5 (203-348)||(1728079-1728224)
chr5 (203-349)||(43597966-43598112)
chr5 (203-349)||(43603458-43603604)
chr5 (203-349)||(43608950-43609096)
chr5 (203-348)||(24956766-24956911)
chr5 (203-348)||(24965229-24965374)
chr5 (213-348)||(23350006-23350141)
chr5 (203-349)||(28843939-28844085)
chr5 (203-348)||(28852550-28852695)
chr5 (216-348)||(31410890-31411022)
chr5 (221-348)||(31421789-31421916)
chr5 (237-348)||(19223555-19223666)
chr5 (223-269)||(17638318-17638364)
chr5 (223-269)||(23028007-23028053)
chr5 (224-270)||(23037923-23037969)
chr5 (36-82)||(19223811-19223857)
[»] scaffold0156 (1 HSPs)
scaffold0156 (213-348)||(35286-35421)
[»] chr7 (12 HSPs)
chr7 (203-348)||(10439937-10440082)
chr7 (203-348)||(4952317-4952462)
chr7 (203-348)||(13831500-13831645)
chr7 (203-348)||(13839531-13839676)
chr7 (203-348)||(18304312-18304457)
chr7 (203-348)||(12978455-12978600)
chr7 (223-348)||(21662962-21663088)
chr7 (254-348)||(30244775-30244869)
chr7 (287-348)||(4941581-4941642)
chr7 (254-348)||(30255413-30255506)
chr7 (222-277)||(1955691-1955746)
chr7 (254-348)||(30245568-30245662)
[»] chr4 (14 HSPs)
chr4 (203-348)||(27343611-27343756)
chr4 (203-348)||(4523600-4523745)
chr4 (203-348)||(12996476-12996621)
chr4 (213-348)||(8094212-8094347)
chr4 (213-348)||(8103018-8103153)
chr4 (202-348)||(21532224-21532369)
chr4 (220-348)||(52295604-52295732)
chr4 (223-348)||(12428418-12428543)
chr4 (222-348)||(33188766-33188891)
chr4 (275-348)||(10638328-10638400)
chr4 (203-248)||(10638406-10638451)
chr4 (254-293)||(12402907-12402946)
chr4 (223-348)||(3424331-3424454)
chr4 (224-269)||(25249599-25249644)
[»] chr3 (23 HSPs)
chr3 (203-348)||(8154564-8154709)
chr3 (203-349)||(50824351-50824497)
chr3 (203-349)||(50851363-50851509)
chr3 (203-348)||(41006556-41006701)
chr3 (203-348)||(41015336-41015481)
chr3 (213-348)||(14538534-14538670)
chr3 (202-349)||(28470137-28470283)
chr3 (203-348)||(27341254-27341400)
chr3 (203-348)||(2211239-2211384)
chr3 (213-348)||(9525364-9525499)
chr3 (213-348)||(9555038-9555173)
chr3 (223-348)||(17933655-17933780)
chr3 (223-348)||(17919199-17919324)
chr3 (222-346)||(43470492-43470615)
chr3 (223-348)||(16816145-16816268)
chr3 (284-348)||(17628265-17628329)
chr3 (254-348)||(21186747-21186841)
chr3 (254-344)||(18349560-18349650)
chr3 (253-348)||(18039011-18039106)
chr3 (254-348)||(30447-30541)
chr3 (254-348)||(8197667-8197761)
chr3 (222-269)||(31276593-31276640)
chr3 (222-263)||(16288692-16288733)
[»] chr1 (14 HSPs)
chr1 (203-348)||(3432810-3432955)
chr1 (203-348)||(31539954-31540099)
chr1 (203-348)||(31548523-31548668)
chr1 (213-348)||(32137684-32137819)
chr1 (203-348)||(35103984-35104129)
chr1 (213-348)||(41746622-41746758)
chr1 (223-348)||(29221429-29221553)
chr1 (223-348)||(44320132-44320257)
chr1 (223-275)||(28457629-28457681)
chr1 (224-306)||(51058330-51058411)
chr1 (254-348)||(21498869-21498963)
chr1 (223-276)||(8241438-8241491)
chr1 (225-269)||(13462775-13462819)
chr1 (224-269)||(22460026-22460071)
[»] chr6 (17 HSPs)
chr6 (213-348)||(33298085-33298219)
chr6 (219-348)||(15391547-15391676)
chr6 (203-349)||(5004060-5004206)
chr6 (213-348)||(13825703-13825838)
chr6 (213-348)||(30824459-30824594)
chr6 (203-349)||(35091596-35091742)
chr6 (213-349)||(25550294-25550430)
chr6 (203-348)||(11279837-11279982)
chr6 (220-348)||(5994699-5994827)
chr6 (203-346)||(25991852-25991995)
chr6 (203-348)||(25506461-25506606)
chr6 (203-348)||(23925335-23925481)
chr6 (212-289)||(26526631-26526708)
chr6 (257-348)||(13490193-13490284)
chr6 (296-349)||(5489132-5489185)
chr6 (256-348)||(11053702-11053794)
chr6 (222-281)||(14894939-14894998)
[»] scaffold0111 (1 HSPs)
scaffold0111 (203-348)||(33035-33180)
[»] scaffold0209 (1 HSPs)
scaffold0209 (203-348)||(4-149)
[»] scaffold0083 (1 HSPs)
scaffold0083 (220-348)||(15813-15941)
[»] scaffold0002 (1 HSPs)
scaffold0002 (213-348)||(121228-121363)
[»] scaffold0497 (1 HSPs)
scaffold0497 (222-348)||(10993-11119)
[»] scaffold0632 (1 HSPs)
scaffold0632 (220-348)||(4390-4518)
[»] scaffold0016 (1 HSPs)
scaffold0016 (213-348)||(23464-23600)
[»] scaffold0173 (1 HSPs)
scaffold0173 (213-348)||(859-994)
[»] scaffold0039 (1 HSPs)
scaffold0039 (237-348)||(40787-40898)
[»] scaffold0431 (1 HSPs)
scaffold0431 (223-348)||(139-264)
[»] scaffold0170 (1 HSPs)
scaffold0170 (222-348)||(7129-7255)
[»] scaffold0222 (1 HSPs)
scaffold0222 (223-348)||(20422-20547)
[»] scaffold0027 (2 HSPs)
scaffold0027 (202-280)||(65622-65701)
scaffold0027 (36-76)||(65470-65510)
[»] scaffold0315 (1 HSPs)
scaffold0315 (222-278)||(10595-10651)
[»] scaffold0015 (1 HSPs)
scaffold0015 (253-348)||(192528-192623)
[»] scaffold0290 (1 HSPs)
scaffold0290 (222-299)||(15760-15837)
[»] scaffold0991 (1 HSPs)
scaffold0991 (255-348)||(345-438)
[»] scaffold0048 (2 HSPs)
scaffold0048 (215-248)||(7587-7620)
scaffold0048 (276-349)||(7622-7695)
[»] scaffold0044 (2 HSPs)
scaffold0044 (255-348)||(81758-81851)
scaffold0044 (254-348)||(65509-65603)
[»] scaffold0007 (1 HSPs)
scaffold0007 (222-269)||(61371-61418)
[»] scaffold0863 (1 HSPs)
scaffold0863 (254-348)||(343-437)
[»] scaffold1380 (1 HSPs)
scaffold1380 (222-263)||(556-597)


Alignment Details
Target: chr8 (Bit Score: 133; Significance: 7e-69; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 184 - 348
Target Start/End: Original strand, 17683697 - 17683861
Alignment:
Q  184 gaaaataatgggaaagagaagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattccc 283  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  17683697 gaaaataatgggaaagagaagggtccgactcggaataaaaaatgaggtacttcaaagtaacttctttgtcaaaatttcgtctgaaacgacgaaaattccc 17683796  T
Q  284 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17683797 gactctaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgaca 17683861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 184 - 348
Target Start/End: Original strand, 17664541 - 17664705
Alignment:
Q  184 gaaaataatgggaaagagaagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattccc 283  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||| ||||||||||    
T  17664541 gaaaataatgggaaagagaagggtccgactcggaataaaaaatgaggtacttcaaagtaacttctttgtcaaaatttcgtctgaaacgatgaaaattccc 17664640  T
Q  284 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17664641 gactctaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgaca 17664705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 39837482 - 39837627
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39837482 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 39837581  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  39837582 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 39837627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 214 - 350
Target Start/End: Original strand, 4839713 - 4839849
Alignment:
Q  214 cggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaag 313  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4839713 cggaatcaaaaatgaggtacttcaaagtaacttctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggtaag 4839812  T
Q  314 gatagagaaaagtggtcaaaatttgaggtatgacata 350  Q
     ||||||||||| |||||||||||| |||||||||||    
T  4839813 aatagagaaaagcggtcaaaatttggggtatgacata 4839849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 213 - 348
Target Start/End: Complemental strand, 17973700 - 17973565
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  17973700 tcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 17973601  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | |||||||||||||||||||||||| |||||||||    
T  17973600 gaatagagaaaagtggtcaaaatttggggtatgaca 17973565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 219 - 349
Target Start/End: Original strand, 39845541 - 39845671
Alignment:
Q  219 taaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatag 318  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||    
T  39845541 taaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaatag 39845640  T
Q  319 agaaaagtggtcaaaatttgaggtatgacat 349  Q
    || ||||||||||||||||| ||||||||||    
T  39845641 aggaaagtggtcaaaatttggggtatgacat 39845671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 30938427 - 30938282
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30938427 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 30938328  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  30938327 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 30938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 25579742 - 25579877
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  25579742 tcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 25579841  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | ||||| |||||||||||||||||  |||||||||    
T  25579842 gaatagataaaagtggtcaaaatttagggtatgaca 25579877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 1406993 - 1407138
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  1406993 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcacaactttaaaaatacgaata 1407092  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  1407093 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 1407138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 220 - 348
Target Start/End: Original strand, 26873541 - 26873669
Alignment:
Q  220 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 319  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| || ||| |||||    
T  26873541 aaaaaataaggtactttaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaatttccgacattacaaatacgaataaaatgggtaagaataga 26873640  T
Q  320 gaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||||||||||| |||||||||    
T  26873641 gaaaagtggtcaaaatttggggtatgaca 26873669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 220 - 348
Target Start/End: Original strand, 26875991 - 26876119
Alignment:
Q  220 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 319  Q
    ||||||||||||| || |||||||||||||||| |||||||||||||||||||| |||||| ||||| ||||||||||||||||||| || ||| |||||    
T  26875991 aaaaaatgaggtattttaaagtaacctctttgtcgaaatttcgtctgaaacgacaaaaatttccgacattaaaaatacgaataaaatgggtaagaataga 26876090  T
Q  320 gaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||||||||||| |||||||||    
T  26876091 gaaaagtggtcaaaatttggggtatgaca 26876119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 17664393 - 17664444
Alignment:
Q  36 gaaatttggaccactgccgaaaaccttcggacttattgacaacattgtacag 87  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17664393 gaaatttggaccactgcagaaaaccttcggacttattgacaacattgtacag 17664444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 17683549 - 17683600
Alignment:
Q  36 gaaatttggaccactgccgaaaaccttcggacttattgacaacattgtacag 87  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17683549 gaaatttggaccactgcagaaaaccttcggacttattgacaacattgtacag 17683600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 4582298 - 4582204
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||| ||| |||| | ||| |||  ||||||| || ||| |||||  | ||  ||||||||||||||||||||||| ||||||||||    
T  4582298 gaaatttcgtctaaaatgacggacatttccggttttaaaagtatgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttaaggtatgaca 4582204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 7e-66; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 184 - 350
Target Start/End: Original strand, 20372214 - 20372380
Alignment:
Q  184 gaaaataatgggaaagagaagggtctgattcggaataaaaaa-tgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcc 282  Q
    ||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |    
T  20372214 gaaaataatgggaaagagaagggtccgactcggaataaaaaaatgaggtacttcaaagtaacct-tttgtcgaaatttcgtctgaaacgacgaaaatttc 20372312  T
Q  283 cgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacata 350  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  20372313 cgactttaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgacata 20372380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 184 - 348
Target Start/End: Complemental strand, 20621682 - 20621518
Alignment:
Q  184 gaaaataatgggaaagagaagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattccc 283  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  20621682 gaaaataatgggaaagagaagggtctgactcagaataaaaaatgaggtacttcaaagtaacatctttgtcgaaattttgtctgaaacgacgaaaattccc 20621583  T
Q  284 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||| ||||| ||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  20621582 gacttcaaaaacacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 20621518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 14583070 - 14582925
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14583070 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 14582971  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  14582970 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 14582925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 15944477 - 15944622
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15944477 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 15944576  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  15944577 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 15944622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 15952992 - 15953137
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15952992 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 15953091  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  15953092 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 15953137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 35138738 - 35138593
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35138738 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 35138639  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  35138638 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35138593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 35147074 - 35146929
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35147074 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 35146975  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  35146974 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35146929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 41233764 - 41233909
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41233764 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 41233863  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  41233864 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 41233909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 38168277 - 38168422
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38168277 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 38168376  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| ||||||||||||||||||||||||  ||||||||    
T  38168377 aaatgggtaagaatagagaaaagtggtcaaaatttggagtatgaca 38168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 42565849 - 42565994
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  42565849 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 42565948  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  42565949 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 42565994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 42574473 - 42574618
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  42574473 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 42574572  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  42574573 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 42574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 203 - 320
Target Start/End: Complemental strand, 35038001 - 35037884
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35038001 agggcctgactcggaataaaaaatgaggtatttcaaagtaacctctctatcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 35037902  T
Q  303 aaataggcaaggatagag 320  Q
    |||| || ||| ||||||    
T  35037901 aaatgggtaagaatagag 35037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 239 - 348
Target Start/End: Complemental strand, 44372814 - 44372705
Alignment:
Q  239 agtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttg 338  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||    
T  44372814 agtaacctctttgtcgaaatttcgtcttaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaaagatagaaaaaagtggtcaaaatttg 44372715  T
Q  339 aggtatgaca 348  Q
     |||||||||    
T  44372714 gggtatgaca 44372705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 239 - 348
Target Start/End: Complemental strand, 44388725 - 44388616
Alignment:
Q  239 agtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttg 338  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||    
T  44388725 agtaacctctttgtcgaaatttcgtcttaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaaagatagaaaaaagtggtcaaaatttg 44388626  T
Q  339 aggtatgaca 348  Q
     |||||||||    
T  44388625 gggtatgaca 44388616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 17687369 - 17687463
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  17687369 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17687463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 237 - 348
Target Start/End: Complemental strand, 25483712 - 25483601
Alignment:
Q  237 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 336  Q
    |||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  25483712 aaagtaacctctctgtcgagatttcgtctgaaacgacgaaaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 25483613  T
Q  337 tgaggtatgaca 348  Q
    || |||||||||    
T  25483612 tggggtatgaca 25483601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 237 - 348
Target Start/End: Complemental strand, 25491318 - 25491207
Alignment:
Q  237 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 336  Q
    |||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  25491318 aaagtaacctctctgtcgagatttcgtctgaaacgacgaaaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 25491219  T
Q  337 tgaggtatgaca 348  Q
    || |||||||||    
T  25491218 tggggtatgaca 25491207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 20621839 - 20621788
Alignment:
Q  36 gaaatttggaccactgccgaaaaccttcggacttattgacaacattgtacag 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20621839 gaaatttggaccactgccgaaaaccttcggacttattgacaacattgtacag 20621788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 223 - 348
Target Start/End: Complemental strand, 35303862 - 35303737
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 322  Q
    ||||||||||||||||| |||||||| ||  |||||||||||||||||||||||| |||  | |||| |||||| ||||||||  || ||    ||||||    
T  35303862 aaatgaggtacttcaaattaacctctctgccgaaatttcgtctgaaacgacgaaatttcttggcttttaaaataagaataaaaggggtaaaatcagagaa 35303763  T
Q  323 aagtggtcaaaatttgaggtatgaca 348  Q
    || | ||||||||||| |||||||||    
T  35303762 aaatagtcaaaatttggggtatgaca 35303737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 254 - 349
Target Start/End: Original strand, 27606616 - 27606710
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    |||||||||||||| ||||| |||||||||| |||||||| |||||||||||| |  ||  |||||||||||| |||||||||||  |||||||||    
T  27606616 gaaatttcgtctgagacgac-aaaattcccgtctttaaaagtacgaataaaattgataaaaatagagaaaagtagtcaaaatttggagtatgacat 27606710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 24285790 - 24285696
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||| |||||||| ||||| ||   ||||||| |||||| |||||  | ||  ||| |||||||||||||||||||| |||||||||    
T  24285790 gaaatttcgtcttaaacgacggaaatttccagttttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatgaca 24285696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 42249426 - 42249520
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||| |||||||| | |||  ||| ||||||| ||||||  ||||  | ||  |||||||||||||||||||||||| |||||||||    
T  42249426 gaaatttcgtctaaaacgacggacattttcgattttaaaagtacgaacgaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 42249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 18989312 - 18989389
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacga 299  Q
    |||||||||||||| |||||||||||| |   | ||||||||||||  |||| |||||||||| ||||||||| ||||    
T  18989312 aaaatgaggtacttgaaagtaacctctctaccgtaatttcgtctgatgcgacaaaaattcccggctttaaaaagacga 18989389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 34070575 - 34070669
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||| |||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  ||||||||||||| |||||||||| |||||||||    
T  34070575 gaaattttgtctaaaacgacggacattaccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtgatcaaaatttggggtatgaca 34070669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 3e-65; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 348 - 542
Target Start/End: Complemental strand, 22042746 - 22042553
Alignment:
Q  348 ataactacatcatctttaactactctttccacttgaaatggctggatatcgtgatgtgcttaaaagacaagttctgggaggttttgaaactgtacatctt 447  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||    
T  22042746 ataactacatcatctttaacaactctttccacttcaaatggctggatatcgtgttgtacttaaaagacaaattctaggaggttttgaaactgtacatctt 22042647  T
Q  448 ccatatcaggtattctatattttcagttttcctaactgctaattttattttgttttactactctgcagtgttgttatacttcttcaatgtgcaca 542  Q
    |||||||||||||||||||||||||| |||||||||||||  |    | ||||| |||||||||||| |||||||||||||||||||||||||||    
T  22042646 ccatatcaggtattctatattttcagctttcctaactgct-ctgcactgttgttatactactctgcactgttgttatacttcttcaatgtgcaca 22042553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 202 - 348
Target Start/End: Original strand, 29186197 - 29186343
Alignment:
Q  202 aagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 301  Q
    ||||||| || |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29186197 aagggtccgactcggaataaaaaatgaggcacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 29186296  T
Q  302 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||| || |||||||||||||||||||||||||||| |||||||||    
T  29186297 aaaatgggtaaggatagagaaaagtggtcaaaatttggggtatgaca 29186343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 213 - 349
Target Start/End: Original strand, 20398565 - 20398701
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  20398565 tcggaataaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatcggtaa 20398664  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    | |||||||||||||||||||||||| ||||||||||    
T  20398665 gaatagagaaaagtggtcaaaatttggggtatgacat 20398701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 20372843 - 20372978
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  20372843 tcggaataaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatcggtaa 20372942  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | |||||||||||||||||||||||| |||||||||    
T  20372943 gaatagagaaaagtggtcaaaatttggggtatgaca 20372978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 1728079 - 1728224
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1728079 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 1728178  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  1728179 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 1728224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 203 - 349
Target Start/End: Original strand, 43597966 - 43598112
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43597966 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 43598065  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  43598066 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 43598112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 203 - 349
Target Start/End: Original strand, 43603458 - 43603604
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43603458 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 43603557  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  43603558 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 43603604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 203 - 349
Target Start/End: Original strand, 43608950 - 43609096
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43608950 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 43609049  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  43609050 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 43609096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 24956766 - 24956911
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24956766 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 24956865  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  24956866 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 24956911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 24965229 - 24965374
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24965229 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 24965328  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  24965329 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 24965374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 23350006 - 23350141
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||| |||||||||||||||||||||||||||||| || ||    
T  23350006 tcggaataaaaaatgaggtacttcaaagtaacctctttgccgaaatttcgtctgaaatgacgagaattcccgactttaaaaatacgaataaaatgggtaa 23350105  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
      |||||||||| ||||||||||||| |||||||||    
T  23350106 aaatagagaaaaatggtcaaaatttggggtatgaca 23350141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 203 - 349
Target Start/End: Complemental strand, 28844085 - 28843939
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  28844085 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 28843986  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  28843985 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 28843939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 28852695 - 28852550
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  28852695 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 28852596  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  28852595 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 28852550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 216 - 348
Target Start/End: Complemental strand, 31411022 - 31410890
Alignment:
Q  216 gaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaagga 315  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||  |||||||||||||||||||||| ||  || |    
T  31411022 gaataaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgttttaaacgacgaaaattcctaactttaaaaatacgaataaaatgggttagaa 31410923  T
Q  316 tagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||| |||||||||||||| |||||||||    
T  31410922 tagagaaatgtggtcaaaatttggggtatgaca 31410890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 221 - 348
Target Start/End: Complemental strand, 31421916 - 31421789
Alignment:
Q  221 aaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagag 320  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| || ||| ||||||    
T  31421916 aaaaatgaggtacttcaaagtaacatctttgtcgaaattttgtctgaaacgacgaaaatttccgacttcaaaaatacgaataaaatgggtaagaatagag 31421817  T
Q  321 aaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||||||||  |||||||||    
T  31421816 aaaagtggtcaaaattttgggtatgaca 31421789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 237 - 348
Target Start/End: Complemental strand, 19223666 - 19223555
Alignment:
Q  237 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 336  Q
    |||||||||||| ||| || ||||| ||||||||||||| ||||| ||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  19223666 aaagtaacctctctgtcgagatttcatctgaaacgacgacaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 19223567  T
Q  337 tgaggtatgaca 348  Q
    || |||||||||    
T  19223566 tggggtatgaca 19223555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 17638364 - 17638318
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 269  Q
    |||||||||||||||||||||||||| ||| |||||||||| |||||    
T  17638364 aaatgaggtacttcaaagtaacctctctgtcgaaatttcgtttgaaa 17638318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 23028007 - 23028053
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 269  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||    
T  23028007 aaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaa 23028053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 23037969 - 23037923
Alignment:
Q  224 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaac 270  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  23037969 aatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaac 23037923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 19223857 - 19223811
Alignment:
Q  36 gaaatttggaccactgccgaaaaccttcggacttattgacaacattg 82  Q
    ||||||||||||  ||| |||||| ||||||||||||||||||||||    
T  19223857 gaaatttggacccttgctgaaaactttcggacttattgacaacattg 19223811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 116; Significance: 9e-59; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 35286 - 35421
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  35286 tcggaataaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 35385  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | |||||||||||||||||||||||| |||||||||    
T  35386 gaatagagaaaagtggtcaaaatttggggtatgaca 35421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 10440082 - 10439937
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10440082 agggtctgactcggaataaaaaatgaggtactttaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 10439983  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| |||||| |||||||||||||||||||||||| |||||||||    
T  10439982 aaatgggcaagaatagagaaaagtggtcaaaatttggggtatgaca 10439937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 4952317 - 4952462
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||||||    
T  4952317 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 4952416  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| ||||| ||||||||||||||||||||||||||||    
T  4952417 aaatgggtaagaatagataaaagtggtcaaaatttgaggtatgaca 4952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 13831645 - 13831500
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13831645 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 13831546  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||| ||||||||||||||||  |||||||||    
T  13831545 aaatgggtaagaatagaggaaagtggtcaaaatttagggtatgaca 13831500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 13839676 - 13839531
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13839676 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 13839577  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| |  ||| |||||| ||||||||||||||||| |||||||||    
T  13839576 aaatggataagaatagaggaaagtggtcaaaatttggggtatgaca 13839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 18304312 - 18304457
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||| |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18304312 agggtccgactcgaaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 18304411  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  18304412 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 18304457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 12978600 - 12978455
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12978600 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 12978501  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  12978500 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 12978455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 223 - 348
Target Start/End: Original strand, 21662962 - 21663088
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgacttt-aaaaatacgaataaaataggcaaggatagaga 321  Q
    |||||||||||||||||||||||||  |||||||||||||||| |||||||||| | || || |||| ||||||||||||||||| || ||  | ||| |    
T  21662962 aaatgaggtacttcaaagtaacctccctgttgaaatttcgtctaaaacgacgaagactctcggctttaaaaaatacgaataaaatgggtaaaaacagata 21663061  T
Q  322 aaagtggtcaaaatttgaggtatgaca 348  Q
    |||||| |||||||||| |||||||||    
T  21663062 aaagtgatcaaaatttggggtatgaca 21663088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 30244869 - 30244775
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||| || ||||||| ||||||||||| ||||||||||||||||||||||| |  ||  ||||||||||||||||||||||||||||||||||    
T  30244869 gaaattacgactgaaacaacgaaaattcctgactttaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttgaggtatgaca 30244775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 4941581 - 4941642
Alignment:
Q  287 tttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  4941581 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 4941642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 30255506 - 30255413
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||| || ||||||| ||||||||| | ||| | ||||||||||||||||| |  ||  |||||||||||||||||||||||| |||||||||    
T  30255506 gaaattacgactgaaacaacgaaaatttctgacatgaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttg-ggtatgaca 30255413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 1955691 - 1955746
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaa 277  Q
    |||||||||| |||||||||||||||| ||  ||||||| ||||||||||||||||    
T  1955691 aaaatgaggtgcttcaaagtaacctctctgccgaaattttgtctgaaacgacgaaa 1955746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 30245662 - 30245568
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||| || ||||||| ||||||||| | ||| | ||||||||||||||||| |  ||  |||||||||||||||||||| ||  |||||||||    
T  30245662 gaaattacgactgaaacaacgaaaatttctgacatgaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaaatttgggtatgaca 30245568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 1e-57; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 27343611 - 27343756
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27343611 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 27343710  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||  |||||||||||||||||||||||| |||||||||    
T  27343711 aaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 27343756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 4523600 - 4523745
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4523600 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 4523699  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| |  ||| |||||| ||||||||||||||||| |||||||||    
T  4523700 aaatggataagaatagaggaaagtggtcaaaatttggggtatgaca 4523745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 12996621 - 12996476
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12996621 agggactgactcggaataaaaaatgaggtacttcaaagtaacctctctaccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 12996522  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  12996521 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 12996476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 8094212 - 8094347
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  8094212 tcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggtaa 8094311  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | |||||||||||||||||||||||| |||||||||    
T  8094312 gaatagagaaaagtggtcaaaatttggggtatgaca 8094347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 8103018 - 8103153
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  8103018 tcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggtaa 8103117  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | |||||||||||||||||||||||| |||||||||    
T  8103118 gaatagagaaaagtggtcaaaatttggggtatgaca 8103153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 202 - 348
Target Start/End: Original strand, 21532224 - 21532369
Alignment:
Q  202 aagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 301  Q
    ||||||| || || |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21532224 aagggtccgactcagaataaaaaatgaggtacttcaaagtaatct-tttgtcgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaat 21532322  T
Q  302 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||| |  |||||||||||||||||||||||||||| |||||||||    
T  21532323 aaaatggataaggatagagaaaagtggtcaaaatttggggtatgaca 21532369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 220 - 348
Target Start/End: Complemental strand, 52295732 - 52295604
Alignment:
Q  220 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 319  Q
    |||||||||||||||||||||||| |||| ||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||    
T  52295732 aaaaaatgaggtacttcaaagtaatctctctgccgaaattttgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaataga 52295633  T
Q  320 gaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||||||||||| |||||||||    
T  52295632 gaaaagtggtcaaaatttggggtatgaca 52295604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 223 - 348
Target Start/End: Original strand, 12428418 - 12428543
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 322  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||  ||||||||| | | ||||||||||||||||||||| || |   ||||||||    
T  12428418 aaatgaggtacttcaaagtaaactcttcgtcgaaatttcgtctgaaataacgaaaatttctggctttaaaaatacgaataaaatgggtagaaatagagaa 12428517  T
Q  323 aagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||||||| |||||||||    
T  12428518 aagtggtcaaaatttggggtatgaca 12428543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 222 - 348
Target Start/End: Complemental strand, 33188891 - 33188766
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 321  Q
    ||||||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||| |  |||||||||||| |||||||  |  ||  ||||| |    
T  33188891 aaaatgaggtaattcaaagtaaccttcttgctgaaatttcgtctgaaacgacgaaaattctcagctttaaaaatacaaataaaaaggataaaaataga-a 33188793  T
Q  322 aaagtggtcaaaatttgaggtatgaca 348  Q
    ||||| ||||||||||| |||||||||    
T  33188792 aaagttgtcaaaatttggggtatgaca 33188766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 10638400 - 10638328
Alignment:
Q  275 aaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||||||||||| |||||||||||| || ||  |||||||||||||||||||||||| |||||||||    
T  10638400 aaaattcccgactttaaaa-tacgaataaaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 10638328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 10638451 - 10638406
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctct 248  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  10638451 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctct 10638406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 254 - 293
Target Start/End: Complemental strand, 12402946 - 12402907
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaa 293  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  12402946 gaaatttcgtctgaaacgacgaaaattcctgactttaaaa 12402907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 348
Target Start/End: Complemental strand, 3424454 - 3424331
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 322  Q
    |||||||||||||||||||||||||  ||  ||||||||||||| |||||||||  |||  | |||| ||| || ||||||||  || ||   |||||||    
T  3424454 aaatgaggtacttcaaagtaacctc--tgccgaaatttcgtctggaacgacgaactttcttggcttttaaagtaagaataaaaggggtaaaattagagaa 3424357  T
Q  323 aagtggtcaaaatttgaggtatgaca 348  Q
    || || |||||||||| |||||||||    
T  3424356 aaatgatcaaaatttggggtatgaca 3424331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 25249599 - 25249644
Alignment:
Q  224 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 269  Q
    ||||||||||| ||||||||||||  |||||||||||||| |||||    
T  25249599 aatgaggtactccaaagtaacctccctgttgaaatttcgtttgaaa 25249644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 4e-55; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 8154564 - 8154709
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8154564 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 8154663  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  8154664 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 8154709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 203 - 349
Target Start/End: Complemental strand, 50824497 - 50824351
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50824497 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 50824398  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  50824397 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 50824351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 203 - 349
Target Start/End: Original strand, 50851363 - 50851509
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50851363 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 50851462  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  50851463 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 50851509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 41006701 - 41006556
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41006701 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 41006602  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||| ||||||||||||| |||||||||    
T  41006601 aaatgggtaagaatagagaaaaatggtcaaaatttggggtatgaca 41006556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 41015481 - 41015336
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41015481 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 41015382  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||| ||||||||||||| |||||||||    
T  41015381 aaatgggtaagaatagagaaaaatggtcaaaatttggggtatgaca 41015336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 14538534 - 14538670
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctcttt-gttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggca 311  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  |    
T  14538534 tcggaataaaaaatgaggtacttcaaagtaacctcttttgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatggata 14538633  T
Q  312 aggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    || |||||||||||||||||||||||| |||||||||    
T  14538634 agaatagagaaaagtggtcaaaatttggggtatgaca 14538670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 28470137 - 28470283
Alignment:
Q  202 aagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 301  Q
    ||||||| || || |||||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  28470137 aagggtccgactcagaataaaaaatgaggtacttcatagtaatct-tttgtcgaaatttcgtctgaaacgacgaaaatttctgactttaaaaatacgaat 28470235  T
Q  302 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    ||||| |  |||||||||||||||||||||||||||| ||||||||||    
T  28470236 aaaatggataaggatagagaaaagtggtcaaaatttggggtatgacat 28470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 27341254 - 27341400
Alignment:
Q  203 agggtctgattcggaataaaa-aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 301  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27341254 agggcctgactcggaataaaaaaatgaggtacttcaaagtaacctttctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaat 27341353  T
Q  302 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||| |  ||| |||||||||||||||||||||||| |||||||||    
T  27341354 aaaatggataagaatagagaaaagtggtcaaaatttggggtatgaca 27341400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 2211384 - 2211239
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||| |||| |||||||||||||||||||| || ||| || ||||||||  |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  2211384 agggcctgactcggaataaaaaatgaggtattttaaaataccctctttgccgaaatttcgtcttaaacgacgaaaattcctgactttaaaaatacgaata 2211285  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||| ||| |||||||||||||||||||||||  |||||||||    
T  2211284 aaataggtaagaatagagaaaagtggtcaaaatttagggtatgaca 2211239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 9525364 - 9525499
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    |||||||||||||||||||| || |||||||||| | ||  |||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||    
T  9525364 tcggaataaaaaatgaggtattttaaagtaacctttctgccgaaatttcgtctaaaacaacgaaaattcccgactttaaaaatacgaataaaatgggtaa 9525463  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | ||||||||||||| |||||||||| |||||||||    
T  9525464 gaatagagaaaagtgatcaaaatttggggtatgaca 9525499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 9555038 - 9555173
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    |||||||||||||||||||| || |||||||||| | ||  |||||||||||| |||| |||||||||||||||||||||||||||| |||||| || ||    
T  9555038 tcggaataaaaaatgaggtattttaaagtaacctttctgccgaaatttcgtctaaaacaacgaaaattcccgactttaaaaatacgagtaaaatgggtaa 9555137  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | ||||||||||||| |||||||||| |||||||||    
T  9555138 gaatagagaaaagtgatcaaaatttggggtatgaca 9555173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 223 - 348
Target Start/End: Complemental strand, 17933780 - 17933655
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 322  Q
    ||||||||||||||||||||||||||  |  ||||||||||||||||  ||||||||| ||||||||||||||||||||||||| || ||  ||||||||    
T  17933780 aaatgaggtacttcaaagtaacctctccgaagaaatttcgtctgaaataacgaaaatttccgactttaaaaatacgaataaaatgggtaaaaatagagaa 17933681  T
Q  323 aagtggtcaaaatttgaggtatgaca 348  Q
    || ||||||||||||| |||||||||    
T  17933680 aattggtcaaaatttggggtatgaca 17933655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 223 - 348
Target Start/End: Complemental strand, 17919324 - 17919199
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 322  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||||  |||||||||  || ||||||||||||||||||||| |  ||  ||||||||    
T  17919324 aaatgaggtactttaaagtaacctctccgacgaaatttcgtctgaaataacgaaaattttcggctttaaaaatacgaataaaatggataaaaatagagaa 17919225  T
Q  323 aagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||||||| |||||||||    
T  17919224 aagtggtcaaaatttggggtatgaca 17919199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 222 - 346
Target Start/End: Original strand, 43470492 - 43470615
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 321  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||||  ||||||| || ||||||||||||||||||||  || ||  ||||| |    
T  43470492 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgaataaaattctcggctttaaaaatacgaataaaaagggtaaaaataga-a 43470590  T
Q  322 aaagtggtcaaaatttgaggtatga 346  Q
    ||||| ||||||||||| |||||||    
T  43470591 aaagtagtcaaaatttggggtatga 43470615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 223 - 348
Target Start/End: Original strand, 16816145 - 16816268
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 322  Q
    |||||||||||||||||||| |||||  ||  |||||||||||||||  ||||||||| ||| |||||||||||||||||||||  | ||  ||||||||    
T  16816145 aaatgaggtacttcaaagta-cctctccgtcaaaatttcgtctgaaataacgaaaatttccggctttaaaaatacgaataaaatgagtaaaaatagagaa 16816243  T
Q  323 aagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||||||| |||||||||    
T  16816244 aagtggtcaaaatttg-ggtatgaca 16816268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 17628329 - 17628265
Alignment:
Q  284 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  17628329 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17628265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 21186841 - 21186747
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||| |||||| |||||||||| || |||||||| |||||||||||| |  ||  | ||| |||||||||||||||||| |||||||||    
T  21186841 gaaatttcgtttgaaacaacgaaaattctcggctttaaaagtacgaataaaatggataaaaacagataaaagtggtcaaaatttggggtatgaca 21186747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 254 - 344
Target Start/End: Complemental strand, 18349650 - 18349560
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtat 344  Q
    |||||||||||| |||||||| | ||| |||| ||||||| ||||||||||||  | ||  |||||||||||| ||||||||||| |||||    
T  18349650 gaaatttcgtctaaaacgacggacatttccgattttaaaagtacgaataaaatgtgtaaaaatagagaaaagttgtcaaaatttggggtat 18349560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 253 - 348
Target Start/End: Complemental strand, 18039106 - 18039011
Alignment:
Q  253 tgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||||||||| ||||   ||| || | || |||||||||||||||| || ||  |  ||||||||||||||||||||| |||||||||    
T  18039106 tgaaatttcgtctgaaacaacgatccttctcggcgtttaaaatacgaataaaatgggtaaaaagcgagaaaagtggtcaaaatttggggtatgaca 18039011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 30447 - 30541
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||| |||||||| | ||| |||  ||||||| ||| || |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  30447 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacaaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 30541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 8197667 - 8197761
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||| |||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  8197667 gaaattttgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 8197761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 31276640 - 31276593
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 269  Q
    |||||||||||||||||||||||||  |||| |||||||||| |||||    
T  31276640 aaaatgaggtacttcaaagtaaccttcttgtcgaaatttcgtttgaaa 31276593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 16288733 - 16288692
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgt 263  Q
    ||||||||||||||||||||||||||| ||  ||||||||||    
T  16288733 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgt 16288692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 4e-55; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 3432810 - 3432955
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3432810 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 3432909  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  3432910 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 3432955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 31540099 - 31539954
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31540099 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 31540000  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  31539999 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 31539954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 31548668 - 31548523
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31548668 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 31548569  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  31548568 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 31548523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 32137684 - 32137819
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  32137684 tcggaataaaaaatgaggtacttcaaagtaacttatttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatggataa 32137783  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | ||||||||||||| |||||||||| |||| ||||    
T  32137784 gaatagagaaaagtgatcaaaatttggggtaagaca 32137819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 35103984 - 35104129
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35103984 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccaactttaaaaatacgaata 35104083  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  35104084 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35104129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 41746622 - 41746758
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctcttt-gttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggca 311  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |  |    
T  41746622 tcggaataaaaaatgaggtacttcaaagtaacctcttttgccgaaattttgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatggata 41746721  T
Q  312 aggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    || ||||| |||||||||||||||||| | |||||||    
T  41746722 agaatagataaaagtggtcaaaatttgggatatgaca 41746758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 223 - 348
Target Start/End: Original strand, 29221429 - 29221553
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 322  Q
    |||||||||| |||||| || ||||| ||  ||||||||||||||||   |||||||| ||||||||||||||||||||||||| || ||  ||||||||    
T  29221429 aaatgaggtatttcaaaata-cctctctgccgaaatttcgtctgaaatagcgaaaatttccgactttaaaaatacgaataaaatgggtaaaaatagagaa 29221527  T
Q  323 aagtggtcaaaatttgaggtatgaca 348  Q
    |||| ||||||||||| |||||||||    
T  29221528 aagtagtcaaaatttggggtatgaca 29221553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 223 - 348
Target Start/End: Original strand, 44320132 - 44320257
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 322  Q
    |||||||||||||  ||||||||||  || |||||||||||||||||||||||   ||| || | || |||||||||||||||| || ||  |  |||||    
T  44320132 aaatgaggtactttcaagtaacctccctgctgaaatttcgtctgaaacgacgatccttctcggcgtttaaaatacgaataaaatgggtaaaaagcgagaa 44320231  T
Q  323 aagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||||||| |||||||||    
T  44320232 aagtggtcaaaatttggggtatgaca 44320257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 28457681 - 28457629
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacga 275  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28457681 aaatgatgtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacga 28457629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 224 - 306
Target Start/End: Original strand, 51058330 - 51058411
Alignment:
Q  224 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaat 306  Q
    ||||||||| |||||| || ||| | || ||||||||||| |||||| ||||||||||||  |||||||||||||||||||||    
T  51058330 aatgaggtatttcaaaata-cctttctgctgaaatttcgtttgaaacaacgaaaattcccagctttaaaaatacgaataaaat 51058411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 21498869 - 21498963
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||| |||||||| | ||| |||  ||||||| ||||||  ||||  | ||  |||||||||||||||||||||||| |||||||||    
T  21498869 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacgaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 21498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 8241438 - 8241491
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaa 276  Q
    ||||||||||||| |||||||||||| |   |||||||||||||||||||||||    
T  8241438 aaatgaggtactttaaagtaacctctctaccgaaatttcgtctgaaacgacgaa 8241491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 13462819 - 13462775
Alignment:
Q  225 atgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 269  Q
    |||||||||||||||||||||||||| |  |||||||||||||||    
T  13462819 atgaggtacttcaaagtaacctctttatccaaatttcgtctgaaa 13462775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 22460071 - 22460026
Alignment:
Q  224 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 269  Q
    ||||||||||| ||||||||||||| ||| |||||||||| |||||    
T  22460071 aatgaggtactccaaagtaacctctctgtcgaaatttcgtttgaaa 22460026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 6e-54; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 213 - 348
Target Start/End: Complemental strand, 33298219 - 33298085
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  33298219 tcggaataaaaaatgaggtacttcaaagtaac-tctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 33298121  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||||||||||||| ||| |||||||||    
T  33298120 ggatagagaaaagtggtcaaaagttggggtatgaca 33298085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 219 - 348
Target Start/End: Original strand, 15391547 - 15391676
Alignment:
Q  219 taaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatag 318  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||    
T  15391547 taaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcctggctttaaaaatacgaataaaatgggcaaggatag 15391646  T
Q  319 agaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||||||||||| | |||||||    
T  15391647 agaaaagtggtcaaaatttgggatatgaca 15391676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 203 - 349
Target Start/End: Complemental strand, 5004206 - 5004060
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5004206 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 5004107  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  5004106 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 5004060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 213 - 348
Target Start/End: Complemental strand, 13825838 - 13825703
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  13825838 tcggaatcaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcctgactttaaaaatacgaataaaatgggtaa 13825739  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | ||||||||||||| |||||||||| |||||||||    
T  13825738 gaatagagaaaagtgatcaaaatttggggtatgaca 13825703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 30824459 - 30824594
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  30824459 tcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggtaa 30824558  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | |||||||||||||||||||||||| |||||||||    
T  30824559 gaatagagaaaagtggtcaaaatttggggtatgaca 30824594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 203 - 349
Target Start/End: Original strand, 35091596 - 35091742
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  35091596 agggtccgattcgaaataaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaatttccgactttaaaaatatgaata 35091695  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  35091696 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 35091742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 213 - 349
Target Start/End: Complemental strand, 25550430 - 25550294
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    |||||||||||||||||||||||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||    
T  25550430 tcggaataaaaaatgaggtacttcaaagtaacctctctgccaaaatttcgtttgaaacgacgaaaattcccgactttaaaaatatgaataaaatgggtaa 25550331  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    | |||||||||||||||||||||||| ||||||||||    
T  25550330 gaatagagaaaagtggtcaaaatttggggtatgacat 25550294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 11279982 - 11279837
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  11279982 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 11279883  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  11279882 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 11279837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 220 - 348
Target Start/End: Complemental strand, 5994827 - 5994699
Alignment:
Q  220 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 319  Q
    ||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||||    
T  5994827 aaaaaatgaggtacttcaaagtaacctctttgccaaaattttgtctgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggtaagaataga 5994728  T
Q  320 gaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||||||||||| |||||||||    
T  5994727 gaaaagtggtcaaaatttggggtatgaca 5994699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 203 - 346
Target Start/End: Complemental strand, 25991995 - 25991852
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || || ||||||||||||||||||||||||||||||||| |   |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25991995 agggtccgactctgaataaaaaatgaggtacttcaaagtaacctctctaccgaaatttcttctgaaacgacgaaaattcccgactttaaaaatacgaata 25991896  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatga 346  Q
    |||| || ||| |||||||||||||||||| ||||| |||||||    
T  25991895 aaatgggtaagaatagagaaaagtggtcaacatttggggtatga 25991852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 25506461 - 25506606
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||| |||| ||||||| |||||||||||| || |||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25506461 agggcctgactcggaatcaaaaatgaggtattttaaagtaacctctctgccgaaatttcgtctaaaacgacgaaaattcccgactttaaaaatacgaata 25506560  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| ||||||||||||| |||||||||| |||||||||    
T  25506561 aaatgggtaagaatagagaaaagtgatcaaaatttggggtatgaca 25506606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 23925481 - 23925335
Alignment:
Q  203 agggtctgattcggaat-aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 301  Q
    |||| |||| ||||||| ||||||||||||||||||||||||| ||| |   |||||||||||  ||| || ||||||||||||||||||||||||||||    
T  23925481 agggcctgactcggaatcaaaaaatgaggtacttcaaagtaacatctctaccgaaatttcgtcaaaaatgatgaaaattcccgactttaaaaatacgaat 23925382  T
Q  302 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||| || ||| |||||||||||||||||||||||| |||||||||    
T  23925381 aaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 23925335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 26526631 - 26526708
Alignment:
Q  212 ttcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgacttt 289  Q
    |||||||  |||||||||||| |||||||||||| || ||  || |||||||||||||||||||||||||||||||||    
T  26526631 ttcggaaccaaaaatgaggtaattcaaagtaaccactctgccgatatttcgtctgaaacgacgaaaattcccgacttt 26526708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 348
Target Start/End: Complemental strand, 13490284 - 13490193
Alignment:
Q  257 atttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| ||||||||  |||||||||||||  |||| | ||||||||||||| |  ||  |||||||||||||||||||||||| |||||||||    
T  13490284 attttgtctgaaataacgaaaattcccggttttacagatacgaataaaatggataaaaatagagaaaagtggtcaaaatttggggtatgaca 13490193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 5489132 - 5489185
Alignment:
Q  296 acgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    ||||||||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  5489132 acgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 5489185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 11053794 - 11053702
Alignment:
Q  256 aatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaata-ggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||||||  ||||||||||  |  ||||||||||||||||||||  || ||  ||||| |||||||||||||||||| |||||||||    
T  11053794 aatttcgtctgaaataacgaaaattctggt-tttaaaaatacgaataaaatttggtaaaaatagaaaaaagtggtcaaaatttggggtatgaca 11053702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 14894998 - 14894939
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattc 281  Q
    ||||||||||||||||||||||  ||||||  ||||| ||||||||| |||| |||||||    
T  14894998 aaaatgaggtacttcaaagtaatttctttgccgaaatatcgtctgaagcgacaaaaattc 14894939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 106; Significance: 9e-53; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 203 - 348
Target Start/End: Complemental strand, 33180 - 33035
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33180 agggtccgactcggaataaaaaatgaggtactttaaagtaacctctttgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgtata 33081  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  33080 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 33035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 4 - 149
Alignment:
Q  203 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 302  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  4 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 103  T
Q  303 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  104 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 220 - 348
Target Start/End: Complemental strand, 15941 - 15813
Alignment:
Q  220 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 319  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||  |||||    
T  15941 aaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggtaaaaataga 15842  T
Q  320 gaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||||||||||| |||||||||    
T  15841 gaaaagtggtcaaaatttggggtatgaca 15813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 213 - 348
Target Start/End: Complemental strand, 121363 - 121228
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    ||||||| ||||||||  |||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  121363 tcggaatcaaaaatgatttacttcaaagtaacctctctaccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 121264  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | |||||||||||||||||||||||| |||||||||    
T  121263 gaatagagaaaagtggtcaaaatttggggtatgaca 121228  T

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Target: scaffold0497 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 222 - 348
Target Start/End: Complemental strand, 11119 - 10993
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 321  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||| || ||| |||||||    
T  11119 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaacaatacgaataaaatgggtaagaatagaga 11020  T
Q  322 aaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||||||||| |||||||||    
T  11019 aaagtggtcaaaatttggggtatgaca 10993  T

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Target: scaffold0632 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 220 - 348
Target Start/End: Complemental strand, 4518 - 4390
Alignment:
Q  220 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 319  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| || ||| |||||    
T  4518 aaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgatgaaaattaccgactttaaaaatatgaataaaatgggtaagaataga 4419  T
Q  320 gaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||   ||||||||||| |||||||||    
T  4418 gaaaaaatgtcaaaatttggggtatgaca 4390  T

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Target: scaffold0016 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 213 - 348
Target Start/End: Complemental strand, 23600 - 23464
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgacttta-aaaatacgaataaaataggca 311  Q
    ||||||| |||||||||||||||||||||||||||| |   ||||||||||| |||| || ||||||||||||||||| |||||||||||||||| || |    
T  23600 tcggaatcaaaaatgaggtacttcaaagtaacctctctaccgaaatttcgtcagaaatgatgaaaattcccgactttaaaaaatacgaataaaatgggta 23501  T
Q  312 aggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    || |||||||||||||||||||||||| |||||||||    
T  23500 agaatagagaaaagtggtcaaaatttggggtatgaca 23464  T

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Target: scaffold0173 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 859 - 994
Alignment:
Q  213 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 312  Q
    ||||||| |||||||||||| ||||||||||||| | ||  ||||||||||||||||||||||||||||||  ||||||||||||||||||||| || ||    
T  859 tcggaatcaaaaatgaggtatttcaaagtaacctttctgccgaaatttcgtctgaaacgacgaaaattcccagctttaaaaatacgaataaaatgggtaa 958  T
Q  313 ggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    | |||||||||  ||||||||||||| |||||||||    
T  959 gaatagagaaagctggtcaaaatttggggtatgaca 994  T

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Target: scaffold0039 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 237 - 348
Target Start/End: Original strand, 40787 - 40898
Alignment:
Q  237 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 336  Q
    |||||||||||||||| || |||||||||||||||| |||||| | |||||||||||||||||||||||| |  ||| ||||||||||||||||||||||    
T  40787 aaagtaacctctttgtcgagatttcgtctgaaacgatgaaaatgctcgactttaaaaatacgaataaaatggataagaatagagaaaagtggtcaaaatt 40886  T
Q  337 tgaggtatgaca 348  Q
    || |||||||||    
T  40887 tggggtatgaca 40898  T

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Target: scaffold0431 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 223 - 348
Target Start/End: Complemental strand, 264 - 139
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 322  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||  ||||||||| | | ||||||||||||||||||||| || |   ||||||||    
T  264 aaatgaggtacttcaaagtaaactcttcgtcgaaatttcgtctgaaataacgaaaatttctggctttaaaaatacgaataaaatgggtagaaatagagaa 165  T
Q  323 aagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||||||| |||||||||    
T  164 aagtggtcaaaatttggggtatgaca 139  T

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Target: scaffold0170 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 222 - 348
Target Start/End: Original strand, 7129 - 7255
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 321  Q
    |||||||||||||||||||||||||   |   ||||||||||||||||| |||||||||| || |||||||| ||| |||||||| || ||  | |||||    
T  7129 aaaatgaggtacttcaaagtaaccttcctcccgaaatttcgtctgaaacaacgaaaattctcggctttaaaagtacaaataaaatgggtaaaaacagaga 7228  T
Q  322 aaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||||||||  |||||||||    
T  7229 aaagtggtcaaaatttagggtatgaca 7255  T

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Target: scaffold0222 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 223 - 348
Target Start/End: Original strand, 20422 - 20547
Alignment:
Q  223 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 322  Q
    |||||||||||| ||||||||||||| ||  ||||||||||||||||| |||||||||| || |||||||| |||||| |||||  | ||    | ||||    
T  20422 aaatgaggtactccaaagtaacctctctgccgaaatttcgtctgaaacaacgaaaattctcggctttaaaagtacgaacaaaatgtgtaaaaccatagaa 20521  T
Q  323 aagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||||||| |||||||||    
T  20522 aagtggtcaaaatttggggtatgaca 20547  T

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Target: scaffold0027 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 202 - 280
Target Start/End: Original strand, 65622 - 65701
Alignment:
Q  202 aagggtctgattcggaataaaa-aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaatt 280  Q
    ||||||| || ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||    
T  65622 aagggtccgactcggaataaaaaaatgaggtacttcaaagtaacatctttgtcgaaatttcgtccgaaacaacgaaaatt 65701  T

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Target: scaffold0027; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 65470 - 65510
Alignment:
Q  36 gaaatttggaccactgccgaaaaccttcggacttattgaca 76  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  65470 gaaatttggaccactgccgaaaactttcggactcattgaca 65510  T

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Target: scaffold0315 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 10595 - 10651
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaa 278  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  10595 aaaatgaggtacttcaaagtaacctctttgccgaaatttcgtctgaagcgacgaaaa 10651  T

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Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 348
Target Start/End: Complemental strand, 192623 - 192528
Alignment:
Q  253 tgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  192623 tgaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatctgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 192528  T

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Target: scaffold0290 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 15760 - 15837
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacga 299  Q
    ||||||||||||||||||||||||| | |   | ||||||||||||| ||||||||||||| | ||||||||| ||||    
T  15760 aaaatgaggtacttcaaagtaacctatctaccgtaatttcgtctgaagcgacgaaaattcctggctttaaaaagacga 15837  T

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Target: scaffold0991 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 255 - 348
Target Start/End: Original strand, 345 - 438
Alignment:
Q  255 aaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||| |||||| | | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  345 aaatttcgtctaaaacgatggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 438  T

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Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 7587 - 7620
Alignment:
Q  215 ggaataaaaaatgaggtacttcaaagtaacctct 248  Q
    ||||||||||||||||||||||||||||||||||    
T  7587 ggaataaaaaatgaggtacttcaaagtaacctct 7620  T

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Target: scaffold0048; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 276 - 349
Target Start/End: Original strand, 7622 - 7695
Alignment:
Q  276 aaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 349  Q
    ||||||| |||||||||||    || ||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  7622 aaattcctgactttaaaaaatgcaaaaaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 7695  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 255 - 348
Target Start/End: Original strand, 81758 - 81851
Alignment:
Q  255 aaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    ||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||  |||||||||    
T  81758 aaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttagggtatgaca 81851  T

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Target: scaffold0044; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 65509 - 65603
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||  ||||||||| |||||||||    
T  65509 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtgtacaaaatttggggtatgaca 65603  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 61418 - 61371
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 269  Q
    ||||||||||||||||||||||||||| || |||||||| || |||||    
T  61418 aaaatgaggtacttcaaagtaacctctatgctgaaattttgtttgaaa 61371  T

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Target: scaffold0863 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 343 - 437
Alignment:
Q  254 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 348  Q
    |||||||||||| |||||| | | ||| |||  ||||||| |||||| |||||  | ||  ||| |||||||||||||||||||| |||||||||    
T  343 gaaatttcgtctaaaacgatggacatttccggttttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatgaca 437  T

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Target: scaffold1380 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1380
Description:

Target: scaffold1380; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 597 - 556
Alignment:
Q  222 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgt 263  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||    
T  597 aaaatgaggtactccaaagtaacctctctgtcgaaatttcgt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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