View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3028_low_12 (Length: 393)

Name: NF3028_low_12
Description: NF3028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3028_low_12
NF3028_low_12
[»] chr4 (49 HSPs)
chr4 (240-393)||(56241880-56242034)
chr4 (257-393)||(13183095-13183232)
chr4 (54-129)||(56242163-56242238)
chr4 (258-393)||(49136427-49136563)
chr4 (257-393)||(51922843-51922981)
chr4 (253-364)||(55638861-55638973)
chr4 (281-392)||(30887199-30887310)
chr4 (281-393)||(14564191-14564303)
chr4 (289-393)||(29149352-29149456)
chr4 (251-393)||(9893610-9893752)
chr4 (256-393)||(39636688-39636826)
chr4 (253-393)||(4954096-4954237)
chr4 (269-393)||(6505117-6505242)
chr4 (253-393)||(43772168-43772309)
chr4 (271-393)||(26651893-26652015)
chr4 (253-393)||(42944943-42945084)
chr4 (253-364)||(15603260-15603372)
chr4 (267-393)||(16566219-16566346)
chr4 (282-385)||(43781571-43781674)
chr4 (251-384)||(9889388-9889521)
chr4 (253-385)||(30842032-30842165)
chr4 (253-385)||(48407750-48407883)
chr4 (271-393)||(46830114-46830237)
chr4 (260-393)||(19592276-19592410)
chr4 (271-392)||(54735696-54735818)
chr4 (288-393)||(38305947-38306052)
chr4 (285-393)||(6138665-6138772)
chr4 (292-385)||(26426167-26426260)
chr4 (253-393)||(49519630-49519771)
chr4 (281-393)||(2175192-2175304)
chr4 (281-361)||(14072432-14072512)
chr4 (284-392)||(14075947-14076055)
chr4 (285-393)||(48550472-48550580)
chr4 (282-385)||(32238111-32238214)
chr4 (291-361)||(28986960-28987030)
chr4 (288-393)||(14054787-14054892)
chr4 (255-386)||(38693952-38694082)
chr4 (251-283)||(46830251-46830283)
chr4 (357-392)||(2171865-2171900)
chr4 (282-361)||(54152975-54153054)
chr4 (287-393)||(13167460-13167566)
chr4 (290-364)||(31520444-31520518)
chr4 (347-393)||(46926043-46926089)
chr4 (354-392)||(54487266-54487304)
chr4 (253-337)||(45780923-45781008)
chr4 (308-393)||(54488561-54488646)
chr4 (356-389)||(55927747-55927780)
chr4 (357-389)||(8604599-8604631)
chr4 (267-393)||(15619531-15619655)
[»] chr6 (18 HSPs)
chr6 (240-393)||(33899050-33899204)
chr6 (281-393)||(16442395-16442507)
chr6 (35-129)||(33899305-33899400)
chr6 (35-129)||(33899455-33899550)
chr6 (267-385)||(13739135-13739254)
chr6 (290-393)||(29409296-29409399)
chr6 (253-393)||(10826006-10826147)
chr6 (267-393)||(16548068-16548195)
chr6 (282-385)||(13744651-13744754)
chr6 (269-385)||(31132395-31132512)
chr6 (282-385)||(6208115-6208218)
chr6 (267-338)||(17830098-17830169)
chr6 (267-392)||(21254924-21255049)
chr6 (356-389)||(4910983-4911016)
chr6 (351-392)||(26405580-26405621)
chr6 (356-389)||(34620961-34620994)
chr6 (356-389)||(34748398-34748431)
chr6 (356-392)||(1499975-1500011)
[»] chr3 (35 HSPs)
chr3 (240-393)||(35930640-35930794)
chr3 (12-129)||(35930383-35930502)
chr3 (257-393)||(10334057-10334194)
chr3 (253-393)||(15511421-15511561)
chr3 (253-393)||(31084123-31084263)
chr3 (281-392)||(53179793-53179903)
chr3 (253-393)||(20813061-20813202)
chr3 (258-393)||(44224682-44224818)
chr3 (253-393)||(52966854-52966995)
chr3 (254-392)||(10853313-10853456)
chr3 (289-393)||(26519616-26519720)
chr3 (271-392)||(3348176-3348298)
chr3 (253-385)||(42318245-42318378)
chr3 (281-393)||(38172352-38172464)
chr3 (240-357)||(14959621-14959739)
chr3 (260-392)||(16246140-16246273)
chr3 (257-393)||(23207113-23207248)
chr3 (253-385)||(38125494-38125627)
chr3 (281-393)||(31618932-31619044)
chr3 (281-361)||(35425278-35425358)
chr3 (240-361)||(48189518-48189637)
chr3 (267-393)||(23496253-23496373)
chr3 (253-393)||(25847948-25848088)
chr3 (254-385)||(53074819-53074951)
chr3 (267-364)||(22736910-22737008)
chr3 (271-392)||(32357444-32357566)
chr3 (288-392)||(45423814-45423918)
chr3 (282-385)||(44939468-44939570)
chr3 (295-361)||(30811608-30811674)
chr3 (256-393)||(38340724-38340861)
chr3 (251-283)||(3348130-3348162)
chr3 (304-392)||(49526715-49526803)
chr3 (282-361)||(8424806-8424885)
chr3 (353-385)||(5406976-5407008)
chr3 (356-384)||(40147832-40147860)
[»] chr8 (35 HSPs)
chr8 (15-132)||(26125254-26125371)
chr8 (236-391)||(26125477-26125634)
chr8 (240-393)||(40742340-40742492)
chr8 (257-393)||(28425517-28425654)
chr8 (269-385)||(36114093-36114210)
chr8 (269-393)||(40742063-40742188)
chr8 (258-393)||(6399153-6399289)
chr8 (240-383)||(30085681-30085828)
chr8 (267-393)||(43550828-43550955)
chr8 (271-392)||(38152220-38152342)
chr8 (253-393)||(3467456-3467597)
chr8 (281-393)||(4941826-4941938)
chr8 (295-393)||(42148971-42149069)
chr8 (253-393)||(34342898-34343037)
chr8 (281-393)||(440234-440346)
chr8 (305-393)||(3097251-3097339)
chr8 (281-385)||(25698012-25698116)
chr8 (269-384)||(27649685-27649801)
chr8 (253-364)||(41981080-41981192)
chr8 (290-393)||(29023200-29023303)
chr8 (267-385)||(44926778-44926897)
chr8 (72-129)||(40742622-40742677)
chr8 (288-392)||(3619114-3619218)
chr8 (291-385)||(8124933-8125027)
chr8 (315-385)||(24897640-24897710)
chr8 (281-382)||(16915013-16915114)
chr8 (281-393)||(22936838-22936950)
chr8 (288-393)||(31246360-31246465)
chr8 (304-393)||(33627079-33627168)
chr8 (304-393)||(41289103-41289192)
chr8 (288-392)||(22552786-22552890)
chr8 (253-338)||(26243014-26243100)
chr8 (316-393)||(42143409-42143486)
chr8 (305-385)||(45147303-45147383)
chr8 (307-391)||(11126494-11126578)
[»] chr7 (35 HSPs)
chr7 (253-393)||(3375426-3375567)
chr7 (240-385)||(9456024-9456174)
chr7 (253-393)||(3622492-3622633)
chr7 (253-393)||(34366014-34366154)
chr7 (261-364)||(12632144-12632248)
chr7 (281-393)||(3342755-3342867)
chr7 (281-393)||(37562535-37562647)
chr7 (257-393)||(39391169-39391306)
chr7 (288-392)||(40903200-40903304)
chr7 (262-393)||(43737971-43738103)
chr7 (281-393)||(44967431-44967543)
chr7 (267-393)||(38230018-38230145)
chr7 (273-392)||(34010994-34011115)
chr7 (253-393)||(48459646-48459787)
chr7 (253-392)||(42740328-42740468)
chr7 (253-360)||(47301622-47301730)
chr7 (260-393)||(47021862-47021996)
chr7 (269-385)||(19095889-19096005)
chr7 (293-385)||(48134557-48134649)
chr7 (271-393)||(386513-386635)
chr7 (289-392)||(1766398-1766501)
chr7 (267-393)||(10371990-10372116)
chr7 (269-385)||(34010292-34010409)
chr7 (266-393)||(3750636-3750763)
chr7 (267-393)||(37639380-37639507)
chr7 (281-393)||(47217573-47217685)
chr7 (278-392)||(36920211-36920325)
chr7 (304-393)||(42752223-42752312)
chr7 (297-364)||(43631756-43631823)
chr7 (344-393)||(32205953-32206002)
chr7 (288-393)||(39634197-39634302)
chr7 (356-389)||(40561735-40561768)
chr7 (288-392)||(2839263-2839367)
chr7 (287-339)||(11341978-11342030)
chr7 (288-392)||(46285373-46285477)
[»] chr1 (32 HSPs)
chr1 (253-392)||(5410579-5410718)
chr1 (252-393)||(4369848-4369990)
chr1 (253-393)||(13055937-13056077)
chr1 (281-392)||(12468181-12468291)
chr1 (271-393)||(42850265-42850388)
chr1 (269-385)||(12247375-12247492)
chr1 (253-393)||(50977386-50977526)
chr1 (253-393)||(7826400-7826541)
chr1 (269-385)||(35536027-35536144)
chr1 (257-393)||(40229516-40229653)
chr1 (267-393)||(20800323-20800450)
chr1 (308-392)||(25061221-25061305)
chr1 (281-393)||(31223342-31223454)
chr1 (267-393)||(35569248-35569375)
chr1 (281-385)||(43728931-43729035)
chr1 (288-393)||(15884201-15884307)
chr1 (271-358)||(31933684-31933772)
chr1 (282-361)||(6464577-6464656)
chr1 (271-385)||(11023383-11023498)
chr1 (282-361)||(45710018-45710097)
chr1 (240-361)||(10470519-10470638)
chr1 (253-338)||(11051411-11051497)
chr1 (253-393)||(48510847-48510988)
chr1 (251-393)||(36205128-36205271)
chr1 (291-385)||(6166088-6166182)
chr1 (267-392)||(23628752-23628877)
chr1 (281-361)||(25229975-25230055)
chr1 (251-283)||(31933638-31933670)
chr1 (251-283)||(42850402-42850434)
chr1 (289-392)||(43730091-43730194)
chr1 (305-393)||(1199819-1199907)
chr1 (295-347)||(13931605-13931657)
[»] scaffold0369 (1 HSPs)
scaffold0369 (281-393)||(8393-8505)
[»] chr2 (37 HSPs)
chr2 (267-385)||(7472724-7472843)
chr2 (289-393)||(2213467-2213571)
chr2 (281-393)||(7296108-7296220)
chr2 (288-392)||(18511062-18511166)
chr2 (290-393)||(28127330-28127433)
chr2 (269-392)||(7295392-7295514)
chr2 (240-393)||(28641551-28641707)
chr2 (257-393)||(36548128-36548264)
chr2 (285-393)||(9988544-9988652)
chr2 (264-393)||(25940284-25940414)
chr2 (253-393)||(26207972-26208113)
chr2 (267-385)||(5916292-5916411)
chr2 (267-385)||(36312215-36312334)
chr2 (290-385)||(39141520-39141615)
chr2 (290-393)||(44619104-44619207)
chr2 (253-338)||(39106766-39106852)
chr2 (249-321)||(2212741-2212814)
chr2 (290-393)||(2215216-2215317)
chr2 (240-359)||(8170227-8170344)
chr2 (288-392)||(16467046-16467150)
chr2 (290-386)||(23358220-23358316)
chr2 (304-364)||(31562756-31562816)
chr2 (282-361)||(14821117-14821196)
chr2 (271-385)||(32501928-32502043)
chr2 (304-392)||(3853876-3853964)
chr2 (264-392)||(25747925-25748053)
chr2 (281-393)||(28261247-28261359)
chr2 (288-392)||(43858256-43858360)
chr2 (289-392)||(3552890-3552993)
chr2 (271-317)||(45714767-45714814)
chr2 (37-102)||(2212510-2212576)
chr2 (308-392)||(3602503-3602587)
chr2 (240-348)||(42516063-42516176)
chr2 (309-393)||(1945082-1945166)
chr2 (308-393)||(27911386-27911471)
chr2 (341-393)||(2213660-2213712)
chr2 (341-393)||(31224693-31224745)
[»] chr5 (28 HSPs)
chr5 (281-393)||(40885168-40885281)
chr5 (289-393)||(3667820-3667924)
chr5 (314-393)||(39988009-39988088)
chr5 (308-392)||(8049094-8049178)
chr5 (269-392)||(9275527-9275651)
chr5 (267-393)||(22482132-22482259)
chr5 (289-393)||(35760155-35760259)
chr5 (267-385)||(32454480-32454599)
chr5 (281-392)||(40495401-40495511)
chr5 (290-393)||(41740635-41740738)
chr5 (260-393)||(41834828-41834962)
chr5 (308-393)||(7385974-7386059)
chr5 (269-385)||(13253132-13253249)
chr5 (253-393)||(24045760-24045900)
chr5 (257-391)||(28869547-28869681)
chr5 (276-393)||(4292102-4292219)
chr5 (281-393)||(16158507-16158619)
chr5 (251-358)||(7714868-7714975)
chr5 (292-385)||(40791119-40791212)
chr5 (292-385)||(42146277-42146370)
chr5 (267-392)||(7178722-7178847)
chr5 (282-361)||(2430370-2430449)
chr5 (253-393)||(32030645-32030784)
chr5 (281-362)||(3060296-3060376)
chr5 (281-393)||(27021086-27021198)
chr5 (309-393)||(5710428-5710511)
chr5 (289-364)||(2694831-2694906)
chr5 (305-393)||(10058056-10058144)
[»] scaffold0005 (1 HSPs)
scaffold0005 (281-393)||(253072-253184)
[»] scaffold0217 (1 HSPs)
scaffold0217 (269-393)||(2072-2197)
[»] scaffold0041 (1 HSPs)
scaffold0041 (288-392)||(46714-46818)
[»] scaffold0381 (1 HSPs)
scaffold0381 (251-384)||(9025-9158)
[»] scaffold0020 (1 HSPs)
scaffold0020 (289-392)||(138554-138657)
[»] scaffold0394 (1 HSPs)
scaffold0394 (267-328)||(5941-6002)
[»] scaffold0983 (1 HSPs)
scaffold0983 (281-393)||(2313-2425)
[»] scaffold0007 (1 HSPs)
scaffold0007 (282-361)||(29199-29278)


Alignment Details
Target: chr4 (Bit Score: 135; Significance: 3e-70; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 240 - 393
Target Start/End: Complemental strand, 56242034 - 56241880
Alignment:
Q  240 aataattatataaaatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaaca 338  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  56242034 aataattatataaaatgagatatttaattttaaatacaattaaaaggatattttggtcattatacattcaaaatcaattttgatttaaatcatctaaaca 56241935  T
Q  339 ttatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  56241934 ttatcaactcataagaatcacttttacattaatgtatccaaacataaatcaattc 56241880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 393
Target Start/End: Complemental strand, 13183232 - 13183095
Alignment:
Q  257 agatatttaattttaaatacaatt-aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaa 355  Q
    ||||||||| |||||||||||||| |||||||| |||||||||| || ||||||||||||||||||||||||| ||||||| |  ||||||| |||||||    
T  13183232 agatatttacttttaaatacaatttaaaggatagtttggtcattttacattcaaaatcaattttgatttaaattatccaaaaaacatcaacttataaaaa 13183133  T
Q  356 tcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||| ||||| || | |||||||||||||||||||||||    
T  13183132 tcatttttaaataagtgtatccaaacataaatcaattc 13183095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 56242238 - 56242163
Alignment:
Q  54 cttcataaatgacttcaattacccatcattatatttgttatttattaattaaaggagaagttctagagaattctta 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56242238 cttcataaatgacttcaattacccatcattatatttgttatttattaattaaaggagaagttctagagaattctta 56242163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 393
Target Start/End: Original strand, 49136427 - 49136563
Alignment:
Q  258 gatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaat 356  Q
    |||||||| ||| ||| ||||||||| ||||| |||||||||| || |||||||||||||||||||| |||| || ||||||  |||||||||||| |||    
T  49136427 gatatttagtttcaaaaacaattaaaaggataatttggtcattgtacattcaaaatcaattttgattaaaattattcaaacaacatcaactcataagaat 49136526  T
Q  357 cacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||||  | | |||||||||||||||||||||||    
T  49136527 cacttttaagtgagtgtatccaaacataaatcaattc 49136563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 257 - 393
Target Start/End: Original strand, 51922843 - 51922981
Alignment:
Q  257 agatatttaattttaaatacaattaaa--ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaa 354  Q
    ||||||||| |||||||||||| ||||  ||||| ||||||||||||| |||||||||||||||||||| |||  |||||||||  |||||||||||| |    
T  51922843 agatatttacttttaaatacaactaaaaaggatagtttggtcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataaga 51922942  T
Q  355 atcacttttacattaatgtatccaaacataaatcaattc 393  Q
    || |||||||    | |||||||||||||||||||||||    
T  51922943 attacttttagtaaagtgtatccaaacataaatcaattc 51922981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 253 - 364
Target Start/End: Complemental strand, 55638973 - 55638861
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||| ||||||| |||||||||||||||||  |||| ||||||||||| |||||||||||||||||||||| | || ||||||||| ||||||||||||    
T  55638973 aatgatatatttacttttaaatacaattaaaatgatagtttggtcattacatattcaaaatcaattttgattcatattatccaaacaatatcaactcata 55638874  T
Q  352 aaaatcactttta 364  Q
    | |||| ||||||    
T  55638873 agaatccctttta 55638861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 30887310 - 30887199
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    ||||| || ||||||||||| | |||||||||||||||||||  ||| ||||||||||| || ||||||||| ||||||||||| |||  ||||||||||    
T  30887310 aaaggttaatttggtcattacacattcaaaatcaattttgatacaaaccatccaaacatcattaactcataagaatcacttttatattggtgtatccaaa 30887211  T
Q  381 cataaatcaatt 392  Q
    ||||||||||||    
T  30887210 cataaatcaatt 30887199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 14564303 - 14564191
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||   |||||||||  || ||||||||| |||||||||||  | || |||||||||    
T  14564303 aaaggataagttggtcattatatattcaaaatcaattttgattcaatctatccaaacaacattaactcataagaatcacttttaactgaaggtatccaaa 14564204  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  14564203 cataaatcaattc 14564191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 393
Target Start/End: Complemental strand, 29149456 - 29149352
Alignment:
Q  289 ttttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatc 388  Q
    ||||||||||| || ||| |||||||||||||||| |||  ||||||||| |||||||| ||||||||||||||||  | | ||||||||||||||||||    
T  29149456 ttttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatc 29149357  T
Q  389 aattc 393  Q
    |||||    
T  29149356 aattc 29149352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 393
Target Start/End: Original strand, 9893610 - 9893752
Alignment:
Q  251 aaaatgagatatttaattttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcat 350  Q
    ||||||||||||||| ||||||  ||| | |||||||| |||  |||||||| |||||||||||||||| |||||||  |||||||||  ||||||||||    
T  9893610 aaaatgagatatttatttttaataacattaaaaggataatttaatcattatacattcaaaatcaattttaatttaaactatccaaacaacatcaactcat 9893709  T
Q  351 aaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    || ||||||||| |  |   |||||||||||||| ||||||||    
T  9893710 aagaatcactttcaagtgggtgtatccaaacatatatcaattc 9893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 393
Target Start/End: Original strand, 39636688 - 39636826
Alignment:
Q  256 gagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaa 354  Q
    |||||||||| || |||||| ||||||| ||||||||||||| ||| | ||| |||||||||||||||| | |  |||||||||  |||||||| ||| |    
T  39636688 gagatatttacttgtaaatataattaaaaggatattttggtcgttacacatttaaaatcaattttgattcatactatccaaacaacatcaactcgtaaga 39636787  T
Q  355 atcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||||||  | | |||||||||||||||||||||||    
T  39636788 atcacttttaagtaagtgtatccaaacataaatcaattc 39636826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 4954237 - 4954096
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    |||||||||| |||||||||||||||||||| ||||| || |||||||| | ||| ||||| |||||||||| ||   |||||||||  |||||||||||    
T  4954237 aatgagatatataattttaaatacaattaaaaggataattaggtcattacacatttaaaattaattttgattcaacctatccaaacaacatcaactcata 4954138  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | |||||||||||  | |  ||| ||||||||||||||||||    
T  4954137 agaatcacttttaagtgagggtacccaaacataaatcaattc 4954096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 269 - 393
Target Start/End: Original strand, 6505117 - 6505242
Alignment:
Q  269 ttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    |||||| |||||||| ||||| ||  |||||||||||||||||||||||||||| |||||  |||||||||  ||||| |||| | ||||||||||| ||    
T  6505117 ttaaatgcaattaaaaggataattcagtcattatatattcaaaatcaattttgacttaaactatccaaacaacatcaagtcatgataatcacttttatat 6505216  T
Q  368 taatgtatccaaacataaatcaattc 393  Q
     | |||||| ||||||||||||||||    
T  6505217 gagtgtatctaaacataaatcaattc 6505242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 43772309 - 43772168
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||| ||||||||| ||||||| ||||| ||||||||||| | | | |||||||||||||||| | || |||||||||  |||||||| ||    
T  43772309 aatgagatatttacttttaaatataattaaaaggatagtttggtcattacacacttaaaatcaattttgattcatattatccaaacaacatcaactcgta 43772210  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | |||||||| || |  | |||||||||||||||||| ||||    
T  43772209 agaatcacttctaaaaaagtgtatccaaacataaatcgattc 43772168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 26652015 - 26651893
Alignment:
Q  271 aaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaa 370  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||||||||||| |||  ||||||| |  ||| |||||||| ||| |||||||    |     
T  26652015 aaatataattaaaggatagtttggtcattatacattcaaaatcaattttgattcaaactatccaaataacatcgactcataagaattacttttagtaaag 26651916  T
Q  371 tgtatccaaacataaatcaattc 393  Q
    |||||| ||||||||||||||||    
T  26651915 tgtatctaaacataaatcaattc 26651893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 42945084 - 42944943
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    |||| |||||||| ||||||||| ||||||| ||||| ||||||||||||| ||| |||||||||||||||  | |  |||||||||  |||||| ||||    
T  42945084 aatgggatatttacttttaaatataattaaaaggatagtttggtcattatacatttaaaatcaattttgatacatactatccaaacaacatcaacacata 42944985  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | |||||||||||  | | | |||| ||||||||||||||||    
T  42944984 agaatcacttttaagtaagtatatctaaacataaatcaattc 42944943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 253 - 364
Target Start/End: Original strand, 15603260 - 15603372
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||| ||||||| ||||| ||| ||||| |||| ||||| |  |||||||||||||||||| |||||| |||||||||  |||||||||||    
T  15603260 aatgagatatttagttttaaaaacaatcaaaaggataatttgatcattgtgcattcaaaatcaattttgacttaaattatccaaacaacatcaactcata 15603359  T
Q  352 aaaatcactttta 364  Q
    | ||||| |||||    
T  15603360 agaatcattttta 15603372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 393
Target Start/End: Original strand, 16566219 - 16566346
Alignment:
Q  267 ttttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    ||||||||||||||||| ||||| ||| ||||||| | |||||||||||||||||||| |||  |||||||||  |||||| || |  |||||||||||     
T  16566219 ttttaaatacaattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcactttta- 16566317  T
Q  366 attaa-tgtatccaaacataaatcaattc 393  Q
    || || |||||||||||||||||||||||    
T  16566318 ataaagtgtatccaaacataaatcaattc 16566346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 282 - 385
Target Start/End: Complemental strand, 43781674 - 43781571
Alignment:
Q  282 aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaac 381  Q
    ||||||| |||||||||| || ||||||||| |||||||||| |||  |||||||||  |||||||||||| ||||||||||| |  | |||||||||||    
T  43781674 aaggataatttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaac 43781575  T
Q  382 ataa 385  Q
    ||||    
T  43781574 ataa 43781571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 384
Target Start/End: Complemental strand, 9889521 - 9889388
Alignment:
Q  251 aaaatgagatatttaattttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcat 350  Q
    |||||||||||||||  |||||  ||| | |||||||| ||| ||||||||| |||||||||||||||| ||| |||  |||||||||  ||| ||||||    
T  9889521 aaaatgagatatttatatttaataacattaaaaggataatttagtcattatacattcaaaatcaattttaattcaaactatccaaacaacatctactcat 9889422  T
Q  351 aaaaatcacttttacattaatgtatccaaacata 384  Q
    || ||||||||| |  | | ||||||||||||||    
T  9889421 aagaatcactttcaagtgagtgtatccaaacata 9889388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 385
Target Start/End: Original strand, 30842032 - 30842165
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    |||| ||| |||| ||||||||||||||||| ||||| ||| |||||| || |||||||||||||||||||| |||  |||||||    |||||||||||    
T  30842032 aatgggatgtttagttttaaatacaattaaaaggataattttgtcattttacattcaaaatcaattttgattcaaactatccaaatgaaatcaactcata 30842131  T
Q  352 aaaatcacttttacattaatgtatccaaacataa 385  Q
    | ||||||||| | |  | |||||||||||||||    
T  30842132 agaatcactttcaaacaagtgtatccaaacataa 30842165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 385
Target Start/End: Complemental strand, 48407883 - 48407750
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    |||| ||| |||| ||||||||||||||||| ||||| ||| |||||| || |||||||||||||||||||| |||  |||||||    |||||||||||    
T  48407883 aatgggatgtttagttttaaatacaattaaaaggataattttgtcattttacattcaaaatcaattttgattcaaactatccaaatgaaatcaactcata 48407784  T
Q  352 aaaatcacttttacattaatgtatccaaacataa 385  Q
    | ||||||||| | |  | |||||||||||||||    
T  48407783 agaatcactttcaaacaagtgtatccaaacataa 48407750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 46830237 - 46830114
Alignment:
Q  271 aaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacatta 369  Q
    ||||||||||||| ||||| |||||||| || | ||| ||||||||||||||| || |  |||||||||  |||||||||||| ||||| |||||    |    
T  46830237 aaatacaattaaaaggataatttggtcaatacacatttaaaatcaattttgatgtagaatatccaaacaacatcaactcataagaatcaattttaagaaa 46830138  T
Q  370 atgtatccaaacataaatcaattc 393  Q
     |||||||||||||||||||||||    
T  46830137 gtgtatccaaacataaatcaattc 46830114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 393
Target Start/End: Complemental strand, 19592410 - 19592276
Alignment:
Q  260 tatttaattttaaatacaattaaagga-tattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatca 358  Q
    |||||| || |||||||||||||| || || |||||||||| || |||||||||||||||| ||| |||  |||||||||   |||| || ||| |||||    
T  19592410 tatttacttctaaatacaattaaaagaataatttggtcattgtacattcaaaatcaattttcattcaaactatccaaacaacgtcaattcgtaagaatca 19592311  T
Q  359 cttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||    | |||||||||||||||||||||||    
T  19592310 cttttagtaaagtgtatccaaacataaatcaattc 19592276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 392
Target Start/End: Complemental strand, 54735818 - 54735696
Alignment:
Q  271 aaatacaattaaagg-atattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacatta 369  Q
    ||||| ||||||||| ||| ||||||||||| | |||||| |||||||||||||||||  |  ||||||  |||||||||||| |||||||||||  |      
T  54735818 aaatataattaaagggatactttggtcattacacattcaagatcaattttgatttaaaatactcaaacaacatcaactcataagaatcacttttaagtat 54735719  T
Q  370 atgtatccaaacataaatcaatt 392  Q
    |||| |||||||||||| |||||    
T  54735718 atgtttccaaacataaaccaatt 54735696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 393
Target Start/End: Original strand, 38305947 - 38306052
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| |||||  |||||||||||||||||||  || | |||||||||  || || | |||| |||||||||| | |||| ||||||||||||||||    
T  38305947 attttggtaattatgcattcaaaatcaattttgatccaagttatccaaacaacatgaatttataagaatcacttttgctttaaggtatccaaacataaat 38306046  T
Q  388 caattc 393  Q
    ||||||    
T  38306047 caattc 38306052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 6138772 - 6138665
Alignment:
Q  285 gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacata 384  Q
    |||| ||||||||||| | ||||||| |||||||| ||| |||  |||||||||  |||||||||||  ||||| ||||| || | ||||||||||||||    
T  6138772 gatagtttggtcattacacattcaaa-tcaattttcattcaaactatccaaacaacatcaactcatatgaatcatttttaaataagtgtatccaaacata 6138674  T
Q  385 aatcaattc 393  Q
    |||||||||    
T  6138673 aatcaattc 6138665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 385
Target Start/End: Complemental strand, 26426260 - 26426167
Alignment:
Q  292 tggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaa-tgtatccaaacataa 385  Q
    ||||||||||| ||||| |||||||||||||| ||   ||||||||| |||||||||| || ||||||||||| |||||  ||||||||||||||    
T  26426260 tggtcattatacattcacaatcaattttgattcaatgtatccaaacaatatcaactcaaaagaatcactttta-attaagcgtatccaaacataa 26426167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 393
Target Start/End: Original strand, 49519630 - 49519771
Alignment:
Q  253 aatgagatatttaattttaaatacaatt-aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||| ||||||||| |||| ||| |||| ||||||||||| | | | |||||||||||| ||  | |  ||||||||| |||||| |||||    
T  49519630 aatgagatatttacttttaaatataattaaaatgatagtttggtcattacacacttaaaatcaattttaatacatactatccaaacaatatcaattcata 49519729  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | ||||| |||||    | ||||||||||||||||| |||||    
T  49519730 agaatcatttttaagcaagtgtatccaaacataaataaattc 49519771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 2175304 - 2175192
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| ||| |||||| ||  ||||||||||||||| ||| |||  |||||||||  |||||| ||| |||||||||||||    | || |||||||    
T  2175304 aaaggataatttagtcattgtacgttcaaaatcaattttaattcaaactatccaaacaacatcaacccatcaaaatcacttttaagcgagtgcatccaaa 2175205  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  2175204 cataaatcaattc 2175192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 361
Target Start/End: Original strand, 14072432 - 14072512
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactt 361  Q
    |||||||| ||| ||||||| | |||||||||||||||||||| |||  |||||||||  |||||||||| | ||||||||    
T  14072432 aaaggataatttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcattagaatcactt 14072512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 392
Target Start/End: Original strand, 14075947 - 14076055
Alignment:
Q  284 ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacat 383  Q
    ||||| ||||||||||| | |||||| || ||||||||||||||  |  ||||||  ||||| |||||| |||||||||||  |  |||| |||||||||    
T  14075947 ggatactttggtcattacacattcaagattaattttgatttaaagtactcaaacaacatcaattcataagaatcacttttaagtatatgtttccaaacat 14076046  T
Q  384 aaatcaatt 392  Q
    |||||||||    
T  14076047 aaatcaatt 14076055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 48550580 - 48550472
Alignment:
Q  285 gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacata 384  Q
    |||| |||| |||||| | ||| |||||||||||||||| |||  |||||||||  |||||||||||| |||||||| ||    | | ||||||||||||    
T  48550580 gatagtttgatcattacacatttaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtttatccaaacata 48550481  T
Q  385 aatcaattc 393  Q
    |||||||||    
T  48550480 aatcaattc 48550472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 385
Target Start/End: Complemental strand, 32238214 - 32238111
Alignment:
Q  282 aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaac 381  Q
    ||||||| ||| ||||||| | ||||||||||| |||||||| |||  |||||||||  |||||||||||  |||||||| ||   || |||||||||||    
T  32238214 aaggataatttagtcattagacattcaaaatcagttttgattcaaactatccaaacaacatcaactcatatgaatcacttctaatatagtgtatccaaac 32238115  T
Q  382 ataa 385  Q
    ||||    
T  32238114 ataa 32238111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 28986960 - 28987030
Alignment:
Q  291 ttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactt 361  Q
    ||||||||||   ||| |||||||||||||||| |||  |||||||||  |||||||||||||||||||||    
T  28986960 ttggtcattacccatttaaaatcaattttgattcaaactatccaaacaacatcaactcataaaaatcactt 28987030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 393
Target Start/End: Original strand, 14054787 - 14054892
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| |||| | || ||||||||||||| |||||||  || ||||||  |||||||   || ||||||||||| || | | |||||||||||||||    
T  14054787 attttggtaattagacatccaaaatcaattttaatttaaagtattcaaacaacatcaacttgaaataatcacttttatataagtttatccaaacataaat 14054886  T
Q  388 caattc 393  Q
    ||||||    
T  14054887 caattc 14054892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 386
Target Start/End: Original strand, 38693952 - 38694082
Alignment:
Q  255 tgagatatttaattttaaatacaattaaagg-atattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaa 353  Q
    |||||| |||| ||||| ||| ||||||| | ||| ||||||||||| ||  ||||||| ||||||||||||||| || ||| ||  |||||| |||||     
T  38693952 tgagatgtttagttttatatataattaaaagtataatttggtcattacat--tcaaaattaattttgatttaaattattcaagcaagatcaacccataag 38694049  T
Q  354 aatcacttttacattaatgtatccaaacataaa 386  Q
    |||||||||||    | ||||||||||||||||    
T  38694050 aatcacttttaagcgagtgtatccaaacataaa 38694082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 46830283 - 46830251
Alignment:
Q  251 aaaatgagatatttaattttaaatacaattaaa 283  Q
    |||||||||||||||||||||||||||||||||    
T  46830283 aaaatgagatatttaattttaaatacaattaaa 46830251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 392
Target Start/End: Original strand, 2171865 - 2171900
Alignment:
Q  357 cacttttacattaatgtatccaaacataaatcaatt 392  Q
    |||||||||| |||||||||||||||||||||||||    
T  2171865 cacttttacagtaatgtatccaaacataaatcaatt 2171900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 361
Target Start/End: Original strand, 54152975 - 54153054
Alignment:
Q  282 aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactt 361  Q
    ||||||| ||| ||||||| | |||||||||||||||||||| |||  || ||||||  |||||||||| | ||||||||    
T  54152975 aaggataatttagtcattagacattcaaaatcaattttgattcaaactattcaaacaacatcaactcatgagaatcactt 54153054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 13167460 - 13167566
Alignment:
Q  287 tattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaa 386  Q
    ||||||||| |||||  ||| |||| ||||||||||| ||   |||||||||| || ||  ||||| ||||||||||| ||   |||||||||| |||||    
T  13167460 tattttggtaattatgcatttaaaagcaattttgattcaatctatccaaacatcattaatacataagaatcacttttaaatgggtgtatccaaatataaa 13167559  T
Q  387 tcaattc 393  Q
    |||||||    
T  13167560 tcaattc 13167566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 31520518 - 31520444
Alignment:
Q  290 tttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactttta 364  Q
    ||||||||||| | ||| |||||||||||| ||| |||  | ||||| |  ||||||||||||||||||||||||    
T  31520518 tttggtcattacacatttaaaatcaatttttattcaaactacccaaaaaacatcaactcataaaaatcactttta 31520444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 393
Target Start/End: Original strand, 46926043 - 46926089
Alignment:
Q  347 tcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||||||||||||||| |  | |||||||||||||||||||||||    
T  46926043 tcataaaaatcacttttaaacgagtgtatccaaacataaatcaattc 46926089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 354 - 392
Target Start/End: Complemental strand, 54487304 - 54487266
Alignment:
Q  354 aatcacttttacattaatgtatccaaacataaatcaatt 392  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  54487304 aatcactttcacatcaatgtatccaaacataaatcaatt 54487266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 337
Target Start/End: Complemental strand, 45781008 - 45780923
Alignment:
Q  253 aatgagatatttaattttaaatacaatt-aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaac 337  Q
    ||||||||||||| |||| | || |||| |||| ||| ||||||||||  | ||  |||||||||||||||| |||||||||||||    
T  45781008 aatgagatatttagtttttagtataatttaaagaataatttggtcattgcacatctaaaatcaattttgattcaaatcatccaaac 45780923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 393
Target Start/End: Original strand, 54488561 - 54488646
Alignment:
Q  308 aaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||||||||||||  || | |||||||||  || || | |||| |||||||||| | |||| |||| |||||||||||||||||    
T  54488561 aaaatcaattttgatccaagttatccaaacaaaatgaatttataagaatcacttttgctttaaggtattcaaacataaatcaattc 54488646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 389
Target Start/End: Complemental strand, 55927780 - 55927747
Alignment:
Q  356 tcacttttacattaatgtatccaaacataaatca 389  Q
    |||||||||||| |||||||||||||||||||||    
T  55927780 tcacttttacatgaatgtatccaaacataaatca 55927747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 357 - 389
Target Start/End: Complemental strand, 8604631 - 8604599
Alignment:
Q  357 cacttttacattaatgtatccaaacataaatca 389  Q
    ||||||||||| |||||||||||||||||||||    
T  8604631 cacttttacatgaatgtatccaaacataaatca 8604599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 393
Target Start/End: Original strand, 15619531 - 15619655
Alignment:
Q  267 ttttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    |||||||||||||||||  |||| ||| ||||||| | |||||| |||| |||||||| |||  |||||||||  |||||| || |  |||||||| ||     
T  15619531 ttttaaatacaattaaaatgataatttagtcattacacattcaagatca-ttttgattcaaactatccaaacaacatcaacccacatgaatcacttatag 15619629  T
Q  366 attaatgtatccaaacataaatcaattc 393  Q
      ||||||||||||||||| ||||||||    
T  15619630 --taatgtatccaaacatacatcaattc 15619655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 4e-63; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 240 - 393
Target Start/End: Complemental strand, 33899204 - 33899050
Alignment:
Q  240 aataattatataaaatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaaca 338  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  33899204 aataattatataaaatgagatatttaattttaaatacaattaaaaggatattttggtcattacacattcaaaatcaattttgatttaaaccatccaaaca 33899105  T
Q  339 ttatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  33899104 ttattaactcataagaatcacttttacattagtgtatccaaacataaatcaattc 33899050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 16442507 - 16442395
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| ||||||||||| | |||||||||||||||| ||| |||| ||||||||| ||||||||||||  ||||||||||| || | ||||||||||    
T  16442507 aaaggatagtttggtcattacacattcaaaatcaattttcattcaaattatccaaacaatatcaactcatatgaatcacttttaaataagtgtatccaaa 16442408  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  16442407 cataaatcaattc 16442395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 33899400 - 33899305
Alignment:
Q  35 agagagagtctggagtcttcttcataaatgacttcaattacccatcattatatttgttattta-ttaattaaaggagaagttctagagaattctta 129  Q
    ||||||||  |||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  33899400 agagagagcatggagtcttcctcataaatgacttcaattatccatcattatatttgttatttatttaattaaaggagaaattccagagaattctta 33899305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 33899550 - 33899455
Alignment:
Q  35 agagagagtctggagtcttcttcataaatgacttcaattacccatcattatatttgttattta-ttaattaaaggagaagttctagagaattctta 129  Q
    ||||||||  |||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  33899550 agagagagaatggagtcttcctcataaatgacttcaattatccatcattatatttgttatttatttaattaaaggagaaattccagagaattctta 33899455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 13739135 - 13739254
Alignment:
Q  267 ttttaaatacaatta-aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    |||||| |||||||| ||||||| |||||||||| || ||||||||| |||||||||| |||  |||||||||  |||||||||||| |||||||||||     
T  13739135 ttttaattacaattacaaggataatttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaa 13739234  T
Q  366 attaatgtatccaaacataa 385  Q
    |  | |||||||||||||||    
T  13739235 acaagtgtatccaaacataa 13739254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 393
Target Start/End: Complemental strand, 29409399 - 29409296
Alignment:
Q  290 tttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatca 389  Q
    ||||||||||||| ||||||||| |||||||||| |||  |||||||||  |||||||||||| ||||| ||||| |  | |||||||||||||||||||    
T  29409399 tttggtcattatacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcatttttaaaaaactgtatccaaacataaatca 29409300  T
Q  390 attc 393  Q
    ||||    
T  29409299 attc 29409296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 393
Target Start/End: Original strand, 10826006 - 10826147
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||| ||||||| || ||| || ||||||| ||||| ||||||||||  ||||| ||||| |||||||||| |||  |||||||||  |||||||||||    
T  10826006 aatgaaatatttatttctaattataattaaaaggatagtttggtcattccatatttaaaattaattttgattcaaactatccaaacaaaatcaactcata 10826105  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | ||||||||||| || | | |||||||||| ||||||||||    
T  10826106 agaatcacttttaaataagtatatccaaacaaaaatcaattc 10826147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 393
Target Start/End: Original strand, 16548068 - 16548195
Alignment:
Q  267 ttttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    ||||||||||||||||| ||||| ||| ||||||| | |||||||||||||||||||| |||  |||||||||  |||||| || |  |||||||||||     
T  16548068 ttttaaatacaattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcactttta- 16548166  T
Q  366 attaa-tgtatccaaacataaatcaattc 393  Q
    || || |||||||||||||||||||||||    
T  16548167 ataaagtgtatccaaacataaatcaattc 16548195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 282 - 385
Target Start/End: Original strand, 13744651 - 13744754
Alignment:
Q  282 aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaac 381  Q
    ||||||| |||||||||| || ||||||||| |||||||||| |||  |||||||||  |||||||||||| ||||||||||| |  | |||||||||||    
T  13744651 aaggataatttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaac 13744750  T
Q  382 ataa 385  Q
    ||||    
T  13744751 ataa 13744754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 385
Target Start/End: Original strand, 31132395 - 31132512
Alignment:
Q  269 ttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    ||||| ||||||||| || || ||||||||||  |  ||||||||||||||||||| |||  |||||||||  |||||| ||||| ||||||||||| ||    
T  31132395 ttaaagacaattaaaagggtaatttggtcatttaaagttcaaaatcaattttgattcaaactatccaaacaacatcaacccataagaatcacttttaaat 31132494  T
Q  368 taatgtatccaaacataa 385  Q
     | |||||||||| ||||    
T  31132495 aagtgtatccaaaaataa 31132512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 385
Target Start/End: Complemental strand, 6208218 - 6208115
Alignment:
Q  282 aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaac 381  Q
    ||||||| ||| ||||||| | ||||||||| |||||||||| |||  ||| |||||  |||||||||||| |||||||||||    | |||||||||||    
T  6208218 aaggataatttagtcattagacattcaaaattaattttgattcaaactatctaaacaacatcaactcataagaatcacttttagtaaagtgtatccaaac 6208119  T
Q  382 ataa 385  Q
    ||||    
T  6208118 ataa 6208115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 17830169 - 17830098
Alignment:
Q  267 ttttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaaca 338  Q
    ||||||||||||||||| |||| ||  ||||||| | |||||||||||||||||||| |||  |||||||||    
T  17830169 ttttaaatacaattaaacgatagttcagtcattacacattcaaaatcaattttgattcaaactatccaaaca 17830098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 392
Target Start/End: Complemental strand, 21255049 - 21254924
Alignment:
Q  267 ttttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttaca 366  Q
    |||||||||||||||||    |||||||| ||||||  ||||||| ||||||||||| |||  | | |||||  || || | |||| ||||| |||||      
T  21255049 ttttaaatacaattaaaatccattttggtaattatactttcaaaagcaattttgattcaaactaccgaaacaacataaattgataagaatcaattttagg 21254950  T
Q  367 ttaatgtatccaaacataaatcaatt 392  Q
    ||| ||||||||||||||||||||||    
T  21254949 ttattgtatccaaacataaatcaatt 21254924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 389
Target Start/End: Original strand, 4910983 - 4911016
Alignment:
Q  356 tcacttttacattaatgtatccaaacataaatca 389  Q
    |||||||||||| |||||||||||||||||||||    
T  4910983 tcacttttacataaatgtatccaaacataaatca 4911016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 392
Target Start/End: Original strand, 26405580 - 26405621
Alignment:
Q  351 aaaaatcacttttacattaatgtatccaaacataaatcaatt 392  Q
    |||||| | ||||||||||||||||||||||||||| |||||    
T  26405580 aaaaattaattttacattaatgtatccaaacataaaacaatt 26405621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 389
Target Start/End: Original strand, 34620961 - 34620994
Alignment:
Q  356 tcacttttacattaatgtatccaaacataaatca 389  Q
    |||||||||||| |||||||||||||||||||||    
T  34620961 tcacttttacataaatgtatccaaacataaatca 34620994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 389
Target Start/End: Original strand, 34748398 - 34748431
Alignment:
Q  356 tcacttttacattaatgtatccaaacataaatca 389  Q
    |||||||||||| |||||||||||||||||||||    
T  34748398 tcacttttacataaatgtatccaaacataaatca 34748431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 1499975 - 1500011
Alignment:
Q  356 tcacttttacattaatgtatccaaacataaatcaatt 392  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  1499975 tcacttttacataaatgtattcaaacataaatcaatt 1500011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 6e-56; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 240 - 393
Target Start/End: Original strand, 35930640 - 35930794
Alignment:
Q  240 aataattatataaaatgagatatttaattttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaaca 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  35930640 aataattatataaaatgagatatttaattttaaatacaattaaaatgatattttggtcattacacattcaaaatcaattttgatttaaaccatccaaaca 35930739  T
Q  339 ttatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||||||||||| ||| |||| ||||||| ||||||||| |||||||||||||    
T  35930740 ttatcaactcataagaatgacttatacattagtgtatccaagcataaatcaattc 35930794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 12 - 129
Target Start/End: Original strand, 35930383 - 35930502
Alignment:
Q  12 atgaaatgggtagtatattacata--gagagagtctggagtcttcttcataaatgacttcaattacccatcattatatttgttatttattaattaaagga 109  Q
    |||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35930383 atgaaatgcgtagtatattacacacagagagagtctggagtcttcttcataaatgacttcaattacccatcattatatttgttatttattaattaaagga 35930482  T
Q  110 gaagttctagagaattctta 129  Q
    ||||||||||||||||||||    
T  35930483 gaagttctagagaattctta 35930502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 257 - 393
Target Start/End: Original strand, 10334057 - 10334194
Alignment:
Q  257 agatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaa 355  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||| |||  |||||||||   ||||||||||| ||    
T  10334057 agatatttacttttaaatacaattaaaaggatagtttggtcattataaattcaaaatcaattttgattcaaactatccaaacaacgtcaactcataagaa 10334156  T
Q  356 tcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | |||||||    | |||||||||||||||||||||||    
T  10334157 ttacttttagtaaagtgtatccaaacataaatcaattc 10334194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 15511561 - 15511421
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaagga-tattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||||||||||| ||||||||| || || ||| |||||||   |||||||||||||||| ||| |||  ||||||||| ||||||||||||    
T  15511561 aatgagatatttaattttaaacacaattaaaagagtaatttcgtcattacgcattcaaaatcaatttttattcaaactatccaaacaatatcaactcata 15511462  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||||||||| || |  ||||||||||||||||||||||    
T  15511461 aaaatcactttta-ataagcgtatccaaacataaatcaattc 15511421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 253 - 393
Target Start/End: Original strand, 31084123 - 31084263
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||| |||||||||||||||||  |||| ||||||||||| |||||||||||||||| ||||| |||  ||||||| | |||||| |||||    
T  31084123 aatgagatatttacttttaaatacaattaaaatgatagtttggtcattacatattcaaaatcaattatgattcaaactatccaaataatatcaagtcata 31084222  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | ||||||||||| |  | |||||||||||||||||||||||    
T  31084223 agaatcactttta-agaagtgtatccaaacataaatcaattc 31084263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 53179793 - 53179903
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| |||||||||| || ||||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||| |  | ||||||||||    
T  53179793 aaaggataatttggtcattgtacattcaaaatcaattttgatttaaactatccaaaca-aatcaactcataaaaatcacttttaaaaaagtgtatccaaa 53179891  T
Q  381 cataaatcaatt 392  Q
    ||||||||||||    
T  53179892 cataaatcaatt 53179903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 393
Target Start/End: Original strand, 20813061 - 20813202
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||| ||||| ||||||||||||||||| ||||| ||| ||||||| | |||||||||||||||||||| |||  |||||||||  |||||||||||    
T  20813061 aatgagaaatttacttttaaatacaattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcata 20813160  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | ||||||||||  || | | |||||||||| ||||||||||    
T  20813161 agaatcacttttgaataagtatatccaaacaaaaatcaattc 20813202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 393
Target Start/End: Original strand, 44224682 - 44224818
Alignment:
Q  258 gatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaat 356  Q
    |||||||| ||| ||| ||||||||| ||||| ||||||||||  | |||||||||||||||||| | |||| |||||||||  |||||||||||| |||    
T  44224682 gatatttagtttcaaaaacaattaaaaggataatttggtcattgcacattcaaaatcaattttgactaaaattatccaaacaacatcaactcataagaat 44224781  T
Q  357 cacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||||  | | |||||||||||||||||||||||    
T  44224782 cacttttaagtgagtgtatccaaacataaatcaattc 44224818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 52966995 - 52966854
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||||| | ||| |||||||||||||||| ||   ||| |||||  |||||||||||    
T  52966995 aatgagatatataattttaaatacaattaaaaggataatttggtcattacacatttaaaatcaattttgattcaacctatctaaacaacatcaactcata 52966896  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | |||||||||||  | |  ||| ||||||||||||||||||    
T  52966895 agaatcacttttaagtgagggtacccaaacataaatcaattc 52966854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 254 - 392
Target Start/End: Complemental strand, 10853456 - 10853313
Alignment:
Q  254 atgagatatttaattttaaatacaatt-----aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactc 348  Q
    ||||||| |||||||||| ||||||||     |||||||| |||||||| || | |||||||||||||||||||| |||  |||||||||  ||||||||    
T  10853456 atgagatgtttaattttatatacaattgattgaaaggataatttggtcaatacacattcaaaatcaattttgattcaaactatccaaacaacatcaactc 10853357  T
Q  349 ataaaaatcacttttacattaatgtatccaaacataaatcaatt 392  Q
    |||| |||||||||||  | | | ||||||||||||||||||||    
T  10853356 ataagaatcacttttaagtgagtatatccaaacataaatcaatt 10853313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 393
Target Start/End: Original strand, 26519616 - 26519720
Alignment:
Q  289 ttttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatc 388  Q
    ||||||||||| || ||| ||||||||||||| || |||  ||||||||| |||||||| ||||||||||||||||  | | ||||||||||||||||||    
T  26519616 ttttggtcattttacatttaaaatcaattttgtttcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatc 26519715  T
Q  389 aattc 393  Q
    |||||    
T  26519716 aattc 26519720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 392
Target Start/End: Original strand, 3348176 - 3348298
Alignment:
Q  271 aaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacatta 369  Q
    ||||||||||||| ||||| |||||||| || | ||||||||||||||||||| ||||  |||||||||  |||||||||||| ||| |||||||    |    
T  3348176 aaatacaattaaaaggataatttggtcaatacacattcaaaatcaattttgatataaaatatccaaacaacatcaactcataagaattacttttaaggaa 3348275  T
Q  370 atgtatccaaacataaatcaatt 392  Q
     ||||||||||||||||||||||    
T  3348276 gtgtatccaaacataaatcaatt 3348298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 385
Target Start/End: Original strand, 42318245 - 42318378
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    |||| ||| |||| ||||||||||||||||| ||||| ||| |||||| || |||||||||||||||||||| |||  ||||||||   |||||||||||    
T  42318245 aatgggatgtttagttttaaatacaattaaaaggataattttgtcattttacattcaaaatcaattttgattcaaactatccaaacgaaatcaactcata 42318344  T
Q  352 aaaatcacttttacattaatgtatccaaacataa 385  Q
    | ||||||||| | |  | |||||||||||||||    
T  42318345 agaatcactttcaaacaagtgtatccaaacataa 42318378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 38172464 - 38172352
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| ||||||||||| | |||||||||||||||| ||| |||  |||||||||  |||||||||||| |||||||| ||    | ||||||||||    
T  38172464 aaaggatagtttggtcattacacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtgtatccaaa 38172365  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  38172364 cataaatcaattc 38172352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 14959621 - 14959739
Alignment:
Q  240 aataattatataaaatgagatatttaattttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaaca 338  Q
    |||||| || ||||||||  ||||||||||||||||||||||||  |||| |||  || ||| | |||||||||||| ||||||| |||||||| |||||    
T  14959621 aataatcatctaaaatgaactatttaattttaaatacaattaaaaagataatttaatcgttacacattcaaaatcaagtttgattcaaatcatctaaaca 14959720  T
Q  339 ttatcaactcataaaaatc 357  Q
      |||||||||||||||||    
T  14959721 acatcaactcataaaaatc 14959739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 392
Target Start/End: Complemental strand, 16246273 - 16246140
Alignment:
Q  260 tatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatca 358  Q
    |||||| ||||| ||||||||||| ||||| |||| |||||| | |||||||||||||||||||| |||  |||||||||  |||||||| ||| |||||    
T  16246273 tatttacttttacatacaattaaaaggatagtttgatcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcctaagaatca 16246174  T
Q  359 cttttacattaatgtatccaaacataaatcaatt 392  Q
    ||| ||    | ||| ||||||||||||||||||    
T  16246173 cttctattaaagtgtttccaaacataaatcaatt 16246140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 257 - 393
Target Start/End: Complemental strand, 23207248 - 23207113
Alignment:
Q  257 agatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaa 355  Q
    ||||||||| ||||||||||||||||| ||||  ||||||||||| |  |||||||| |||||||||| |||  ||| |||||  ||||||||||||||     
T  23207248 agatatttacttttaaatacaattaaaaggatggtttggtcattacaagttcaaaattaattttgattcaaactatc-aaacaacatcaactcataaaa- 23207151  T
Q  356 tcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||| || |  | |||||||||||||||||||||||    
T  23207150 tcacttgtaaaaaagtgtatccaaacataaatcaattc 23207113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 385
Target Start/End: Complemental strand, 38125627 - 38125494
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    |||| ||| |||| ||||||||||||||||| ||||| ||| |||||| || ||||||||| |||||||||| |||  ||||||||   |||||||||||    
T  38125627 aatgggatgtttagttttaaatacaattaaaaggataattttgtcattttacattcaaaattaattttgattcaaactatccaaacgaaatcaactcata 38125528  T
Q  352 aaaatcacttttacattaatgtatccaaacataa 385  Q
    | ||||||||| | |  | |||||||||||||||    
T  38125527 agaatcactttcaaacaagtgtatccaaacataa 38125494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 31619044 - 31618932
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    ||||||||  ||| |||||||| ||||||||| |||||||||| |||  |||||||||  |||||||||||| |||||||| ||  | |  |||||||||    
T  31619044 aaaggataagttgatcattatacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttctaagtgagagtatccaaa 31618945  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  31618944 cataaatcaattc 31618932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 361
Target Start/End: Original strand, 35425278 - 35425358
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactt 361  Q
    |||||||| ||| ||||||| | |||||||||||||||||||| |||  ||||||||| ||||||||||||| ||||||||    
T  35425278 aaaggataatttagtcattacacattcaaaatcaattttgattcaaactatccaaacaatatcaactcataagaatcactt 35425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 48189637 - 48189518
Alignment:
Q  240 aataattatataaaatgagatatttaattttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacat 339  Q
    ||||||||| ||||||||  |||||| ||||||  ||| |  ||||||| ||| ||||||||| |||||||||||||||| ||| |||  |||||||||     
T  48189637 aataattatctaaaatga--tatttatttttaataacattagaaggataatttagtcattatacattcaaaatcaattttaattcaaactatccaaacaa 48189540  T
Q  340 tatcaactcataaaaatcactt 361  Q
     |||||||||||| ||||||||    
T  48189539 catcaactcataagaatcactt 48189518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 393
Target Start/End: Original strand, 23496253 - 23496373
Alignment:
Q  267 ttttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    |||||||||||||||||  |||| ||| ||||||||| |||||||||||||||||||| |||  |||||||||  |||||| |  || |||||||||||     
T  23496253 ttttaaatacaattaaaatgatagtttagtcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaacccgcaagaatcactttta- 23496351  T
Q  366 attaatgtatccaaacataaatcaattc 393  Q
          ||||||||||||||||||||||    
T  23496352 ------gtatccaaacataaatcaattc 23496373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 393
Target Start/End: Original strand, 25847948 - 25848088
Alignment:
Q  253 aatgagatatttaattttaaatacaatt-aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||| ||||||| |||| ||||||||| |||| ||| ||||||||||| | ||| |||||||||||| ||| || | |||||||||  |  ||||||||    
T  25847948 aatgaaatatttagtttttaatacaatttaaagtataatttggtcattacacatttaaaatcaatttttattcaact-atccaaacaacacaaactcata 25848046  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | ||||| |||||  | || ||||||||||||||||||||||    
T  25848047 agaatcatttttaagtgaaggtatccaaacataaatcaattc 25848088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 385
Target Start/End: Original strand, 53074819 - 53074951
Alignment:
Q  254 atgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataa 352  Q
    |||||||||||| || |||||||||||||| || ||  |||||| |||   ||| |||||||||||||||| |||  |||||||||  ||| ||||||||    
T  53074819 atgagatatttagttataaatacaattaaaagggtaagttggtctttacgcatttaaaatcaattttgattcaaactatccaaacaacatccactcataa 53074918  T
Q  353 aaatcacttttacattaatgtatccaaacataa 385  Q
     |||||||||||  | | |||||||||||||||    
T  53074919 gaatcacttttaagtgagtgtatccaaacataa 53074951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 364
Target Start/End: Original strand, 22736910 - 22737008
Alignment:
Q  267 ttttaaatacaattaaagg-atattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactttta 364  Q
    |||| |||||||||||| | ||| |||| |||||| | |||||||||||||||||||| ||| ||||| ||||  || ||||||||| |||||||||||    
T  22736910 tttttaatacaattaaaagtataatttgttcattacacattcaaaatcaattttgattcaaaccatcccaacaacattaactcataataatcactttta 22737008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 392
Target Start/End: Original strand, 32357444 - 32357566
Alignment:
Q  271 aaatacaattaaagg-atattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacatta 369  Q
    ||||||||||||||| |||||||| |||| | |  ||||||||||||||| ||| |||  | |||||||  |||||| ||||| ||||||||||| || |    
T  32357444 aaatacaattaaagggatattttgatcatcacacgttcaaaatcaattttaattcaaagtacccaaacaacatcaacacataagaatcacttttaaatga 32357543  T
Q  370 atgtatccaaacataaatcaatt 392  Q
     ||| | ||||||||||||||||    
T  32357544 gtgttttcaaacataaatcaatt 32357566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 45423918 - 45423814
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| ||| || || ||||||||||||||||| ||   |||||||||  || || | |||| |||||||||||| ||||| ||||||||||||||     
T  45423918 attttggtaattgtacatccaaaatcaattttgattcaagctatccaaacaacatgaattgataagaatcacttttactttaatatatccaaacataaac 45423819  T
Q  388 caatt 392  Q
    |||||    
T  45423818 caatt 45423814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 385
Target Start/End: Complemental strand, 44939570 - 44939468
Alignment:
Q  282 aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaac 381  Q
    ||||||| ||| ||||||| | ||||||||| |||||||||| |||  || ||||||  |||||||||||| |||||||| ||  | |||||||||||||    
T  44939570 aaggataatttagtcattagacattcaaaattaattttgattaaaactattcaaacaacatcaactcataagaatcacttata-gtaaatgtatccaaac 44939472  T
Q  382 ataa 385  Q
    ||||    
T  44939471 ataa 44939468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 30811674 - 30811608
Alignment:
Q  295 tcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactt 361  Q
    |||||| | |||||||||||||||||||| |||  ||||||||| |||||| |||||| ||||||||    
T  30811674 tcattacacattcaaaatcaattttgattcaaactatccaaacaatatcaagtcataagaatcactt 30811608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 393
Target Start/End: Original strand, 38340724 - 38340861
Alignment:
Q  256 gagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaa 354  Q
    |||||||||| ||||| ||| ||| ||| ||||| |||||||| || | ||| |||||||||||| ||| |||  |||||||||   |||||| ||||||    
T  38340724 gagatatttagttttatatataataaaaaggataatttggtcactacacatttaaaatcaatttttattcaaactatccaaacaacgtcaacttataaaa 38340823  T
Q  355 atcacttttacattaatgtatccaaacataaatcaattc 393  Q
    || ||||||| || |   |||||||||||||||||||||    
T  38340824 attactttta-ataagcatatccaaacataaatcaattc 38340861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 3348130 - 3348162
Alignment:
Q  251 aaaatgagatatttaattttaaatacaattaaa 283  Q
    |||||||||||||||||||||||||||||||||    
T  3348130 aaaatgagatatttaattttaaatacaattaaa 3348162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 49526803 - 49526715
Alignment:
Q  304 attcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaatt 392  Q
    |||||||| ||||||||||||| |  ||  |||||  || || | |||| ||||| |||||||| ||||||||||||||||||||||||    
T  49526803 attcaaaagcaattttgatttagactatttaaacaacataaattgataagaatcaattttacatgaatgtatccaaacataaatcaatt 49526715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 361
Target Start/End: Complemental strand, 8424885 - 8424806
Alignment:
Q  282 aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactt 361  Q
    ||||||| ||| ||||||| | | |||||||||||||||||| |||  || ||||||  |||||||||||| ||||||||    
T  8424885 aaggataatttagtcattacacactcaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcactt 8424806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 353 - 385
Target Start/End: Original strand, 5406976 - 5407008
Alignment:
Q  353 aaatcacttttacattaatgtatccaaacataa 385  Q
    ||||||||||||||| |||||||||||||||||    
T  5406976 aaatcacttttacatgaatgtatccaaacataa 5407008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Complemental strand, 40147860 - 40147832
Alignment:
Q  356 tcacttttacattaatgtatccaaacata 384  Q
    |||||||||||||||||||||||||||||    
T  40147860 tcacttttacattaatgtatccaaacata 40147832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 6e-53; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 26125254 - 26125371
Alignment:
Q  15 aaatgggtagtatattacatagagagagtctggagtcttcttcataaatgacttcaattacccatcattatatttgttatttattaattaaaggagaagt 114  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26125254 aaatgggtaaaatattacagagagagagtctggagtcttcttcataaatgacttcaattacccatcattatatttgttatttattaattaaaggagaagt 26125353  T
Q  115 tctagagaattcttactt 132  Q
    ||||||||||||||||||    
T  26125354 tctagagaattcttactt 26125371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 236 - 391
Target Start/End: Original strand, 26125477 - 26125634
Alignment:
Q  236 cttgaataattatataaaatgagatattt-aattttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatcc 333  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||| ||||||| | |||||||||||||||||||||||| | |||    
T  26125477 cttgaataattatataaaatgagatattttaattttaaatacaattaaaaagatattttcgtcattacacattcaaaatcaattttgatttaaaccgtcc 26125576  T
Q  334 aaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaat 391  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  26125577 aaacattatcaactcataagaatcatttttacattagtgtatccaaacataaatcaat 26125634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 240 - 393
Target Start/End: Complemental strand, 40742492 - 40742340
Alignment:
Q  240 aataattatataaaatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaaca 338  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || || |||||||| || | ||| ||||||||||||||||||||  |||||||||    
T  40742492 aataattatataaaatgaaatatttaattttaaacacaattaaaagggtaatttggtcactacacatttaaaatcaattttgatttaaaatatccaaaca 40742393  T
Q  339 ttatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | |||||||||||| ||||||  |||||||| |||||||||||||||||||||||    
T  40742392 tcatcaactcataagaatcac--ttacattagtgtatccaaacataaatcaattc 40742340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 393
Target Start/End: Complemental strand, 28425654 - 28425517
Alignment:
Q  257 agatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaa 355  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||| |  ||||||||||||||||||| |||  |||||||||   ||||||||||| ||    
T  28425654 agatatttacttttaaatacaattaaaaggatagtttggtcattacacgttcaaaatcaattttgattcaaactatccaaacaacgtcaactcataagaa 28425555  T
Q  356 tcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||| ||    | |||||||||||||||||||||||    
T  28425554 tcacttgtaagaaagtgtatccaaacataaatcaattc 28425517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 269 - 385
Target Start/End: Complemental strand, 36114210 - 36114093
Alignment:
Q  269 ttaaatacaattaaagga-tattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    ||||||||||||||| || || ||||||||||  || ||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||| |     
T  36114210 ttaaatacaattaaaagagtaatttggtcatttaatgttcaaaatcaattttgattcaaattatccaaacaatatcaactcataagaatcacttttaaac 36114111  T
Q  368 taatgtatccaaacataa 385  Q
     | |||||||||||||||    
T  36114110 gagtgtatccaaacataa 36114093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 269 - 393
Target Start/End: Original strand, 40742063 - 40742188
Alignment:
Q  269 ttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    ||||||||||||||| ||||| |||| |||||| | |||||||||||| ||| ||| |||||||||||||| ||||||||||||| ||||| |||||       
T  40742063 ttaaatacaattaaaaggataatttgatcattacacattcaaaatcaagtttcattcaaatcatccaaacaatatcaactcataagaatcaattttatta 40742162  T
Q  368 taatgtatccaaacataaatcaattc 393  Q
     | |||||||||||||||||||||||    
T  40742163 aagtgtatccaaacataaatcaattc 40742188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 393
Target Start/End: Complemental strand, 6399289 - 6399153
Alignment:
Q  258 gatatttaattttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaat 356  Q
    |||||||| ||| ||| |||||||||  |||| ||||||||||  | |||||||||||||||||||| |||| |||||||||  |||||||||||| |||    
T  6399289 gatatttagtttcaaaaacaattaaaaagataatttggtcattgcacattcaaaatcaattttgattaaaattatccaaacaacatcaactcataagaat 6399190  T
Q  357 cacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||||  | | |||||| ||||||||||||||||    
T  6399189 cacttttaagtgagtgtatcgaaacataaatcaattc 6399153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 240 - 383
Target Start/End: Complemental strand, 30085828 - 30085681
Alignment:
Q  240 aataattatataaaatgagatatttaattttaaatacaatt-aaaggatattttggtcattatatat------tcaaaatcaattttgatttaaatcatc 332  Q
    |||||||||||||||||| ||||||||||||||| |||||| ||||| || |||||||| || ||||      |||| |||||||||||||||||  |||    
T  30085828 aataattatataaaatgaaatatttaattttaaacacaattaaaagggtaatttggtcactacatatttaaaatcaatatcaattttgatttaaaatatc 30085729  T
Q  333 caaacattatcaactcataaaaatcacttttacattaatgtatccaaacat 383  Q
    |||||||  |||||||   | |||||||||||||||| |||||||||||||    
T  30085728 caaacatcgtcaactc---agaatcacttttacattagtgtatccaaacat 30085681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 393
Target Start/End: Original strand, 43550828 - 43550955
Alignment:
Q  267 ttttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    ||||||||||||||||| ||||| ||| ||| ||| | |||||||||||||||||||| |||| |||||||||  |||||| || || |||||||||||     
T  43550828 ttttaaatacaattaaaaggatagtttagtctttacacattcaaaatcaattttgattcaaattatccaaacaacatcaacccacaagaatcactttta- 43550926  T
Q  366 attaa-tgtatccaaacataaatcaattc 393  Q
    || || |||||||||||||||||||||||    
T  43550927 ataaagtgtatccaaacataaatcaattc 43550955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 392
Target Start/End: Complemental strand, 38152342 - 38152220
Alignment:
Q  271 aaatacaattaaagg-atattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacatta 369  Q
    ||||||||||||||| ||| ||||||||||| |  |||||||||||||||||||||||  ||||||||   |||||||||||| ||||| |||||  | |    
T  38152342 aaatacaattaaagggatactttggtcattacacgttcaaaatcaattttgatttaaagtatccaaaccacatcaactcataagaatcatttttaagtaa 38152243  T
Q  370 atgtatccaaacataaatcaatt 392  Q
    || | ||||||||||||||||||    
T  38152242 atatttccaaacataaatcaatt 38152220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 393
Target Start/End: Original strand, 3467456 - 3467597
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||| ||||||| || ||| || ||||||| ||||| ||||||||||  ||||| |||||||||||||||| |||  |||||| ||  ||||| |||||    
T  3467456 aatgaaatatttatttctaattataattaaaaggatagtttggtcattccatatttaaaatcaattttgattcaaactatccaaccaacatcaattcata 3467555  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | ||||||||||| || ||| |||||||||| ||||||||||    
T  3467556 agaatcacttttaaataaatatatccaaacagaaatcaattc 3467597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 4941938 - 4941826
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||| ||| |||||||||| || |||||||||||||||| ||| |||| || ||||||  |||||||||||| |||| |||||| || | | ||||||||    
T  4941938 aaagaataatttggtcattttacattcaaaatcaattttaattcaaattattcaaacaacatcaactcataagaatcgcttttaaataattttatccaaa 4941839  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  4941838 cataaatcaattc 4941826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 42148971 - 42149069
Alignment:
Q  295 tcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||| || |||||||||||||||||||| |||| ||| |||||  |||||||||||  ||||||||||| || | | |||||||||||||||||||||    
T  42148971 tcattttacattcaaaatcaattttgattcaaattatctaaacaacatcaactcatacgaatcacttttaaataagtctatccaaacataaatcaattc 42149069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 34343037 - 34342898
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaaggat-attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    |||||| | |||| ||| ||||||||||||| ||| | ||||||||||| |  ||||||||||||||||||| |||| |||||||||  ||| ||| |||    
T  34343037 aatgaggtgtttattttaaaatacaattaaaagattaatttggtcattacac-ttcaaaatcaattttgattcaaattatccaaacaacatccact-ata 34342940  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | ||||||||||| || ||| |||||||||| ||||||||||    
T  34342939 agaatcacttttaaataaatttatccaaacaaaaatcaattc 34342898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 440346 - 440234
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    ||||||||  |||||||||||| ||||||||||| |||||||| ||   |||||||||   | ||||||||| ||||| |||||  | ||||||||||||    
T  440346 aaaggataagttggtcattatacattcaaaatcagttttgattcaatctatccaaacaacgttaactcataagaatcatttttaactgaatgtatccaaa 440247  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  440246 cataaatcaattc 440234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 3097339 - 3097251
Alignment:
Q  305 ttcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||||||||||||||| |||  |||||||||  |||||||||||| |||||||||||  | | | |||||||||||||||||||||    
T  3097339 ttcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaagtgagtatatccaaacataaatcaattc 3097251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 385
Target Start/End: Complemental strand, 25698116 - 25698012
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    ||||| || |||||| |||  |||||||||||||||||||||| |||  |||||||||  |||||||||||| ||||||||||| || | | ||||||||    
T  25698116 aaagggtaatttggttatttaatattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtttatccaaa 25698017  T
Q  381 cataa 385  Q
    |||||    
T  25698016 cataa 25698012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 384
Target Start/End: Original strand, 27649685 - 27649801
Alignment:
Q  269 ttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    ||||||| ||||||| || || ||||||||||  || ||||||||||||||||||| |||  |||||||||  |||||||||||| ||||||||||| ||    
T  27649685 ttaaatataattaaaagggtaatttggtcattcaatgttcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaat 27649784  T
Q  368 taatgtatccaaacata 384  Q
     | |||||| |||||||    
T  27649785 gagtgtatctaaacata 27649801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 364
Target Start/End: Original strand, 41981080 - 41981192
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||| ||||||| || ||| ||||||||||  |||| ||||||||||  ||||| |||||||||||||||| |||  |||||||||  |||||||||||    
T  41981080 aatgaaatatttatttctaattacaattaaaaagatagtttggtcattccatatttaaaatcaattttgattcaaagtatccaaacaacatcaactcata 41981179  T
Q  352 aaaatcactttta 364  Q
    | |||||||||||    
T  41981180 agaatcactttta 41981192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 393
Target Start/End: Original strand, 29023200 - 29023303
Alignment:
Q  290 tttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatca 389  Q
    |||||||||| || |||||||||||||||||||| |||  |||||||||  |||||||||||| ||||| ||||| |  | |||||||||| ||||| ||    
T  29023200 tttggtcattttacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataacaatcaattttaaacaagtgtatccaaatataaacca 29023299  T
Q  390 attc 393  Q
    ||||    
T  29023300 attc 29023303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 44926778 - 44926897
Alignment:
Q  267 ttttaaatacaatta-aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    |||||| |||||||| || |||| |||||||||| || ||||||||| |||||||||| |||  ||||||| |  |||||||||||| |||||||||||     
T  44926778 ttttaattacaattacaaagataatttggtcattttacattcaaaattaattttgattcaaactatccaaataacatcaactcataagaatcacttttaa 44926877  T
Q  366 attaatgtatccaaacataa 385  Q
    |  | |||||||||||||||    
T  44926878 acaagtgtatccaaacataa 44926897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 40742677 - 40742622
Alignment:
Q  72 ttacccatcattatatttgttatttattaattaaaggagaagttctagagaattctta 129  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  40742677 ttacccatcactatatttgttatttattaattaa--gagaagttctagagaattctta 40742622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 3619218 - 3619114
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| |||||| ||| |||||||||||||||| |||  |||||||||  ||  | | |||| ||||||||| | ||||||||||||||||| ||||    
T  3619218 attttggtaattatacatttaaaatcaattttgattcaaactatccaaacaacatacattgataagaatcactttcatattaatgtatccaaacacaaat 3619119  T
Q  388 caatt 392  Q
    |||||    
T  3619118 caatt 3619114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 291 - 385
Target Start/End: Original strand, 8124933 - 8125027
Alignment:
Q  291 ttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataa 385  Q
    |||||||||||  ||| |||||||||||||||| |||  |||||||||   ||||||| ||| ||||||||||| || | |||||||||||||||    
T  8124933 ttggtcattatccatttaaaatcaattttgattcaaactatccaaacaacttcaactcctaagaatcacttttaaatgagtgtatccaaacataa 8125027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 385
Target Start/End: Complemental strand, 24897710 - 24897640
Alignment:
Q  315 attttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataa 385  Q
    ||||||||| |||| |||||||||  |||||||||||| ||||| ||||| || |||||||||||||||||    
T  24897710 attttgattcaaattatccaaacaacatcaactcataagaatcaattttaaataaatgtatccaaacataa 24897640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 382
Target Start/End: Original strand, 16915013 - 16915114
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    ||||| || ||| ||||||| | |||||||||||||||||||  ||| || |||||||| || ||||||||| |||||||||||  ||  ||||||||||    
T  16915013 aaaggttaatttagtcattacacattcaaaatcaattttgatacaaaccaaccaaacatcattaactcataagaatcacttttatgttggtgtatccaaa 16915112  T
Q  381 ca 382  Q
    ||    
T  16915113 ca 16915114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 22936950 - 22936838
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaa-tgtatccaa 379  Q
    |||||||| ||| |||||||||||||||||| ||| ||||||| |||  |||||||||  |||||  || || |||||||| || || || |||||||||    
T  22936950 aaaggatagtttagtcattatatattcaaaaccaaatttgattcaaactatccaaacaacatcaatccacaagaatcacttcta-ataaagtgtatccaa 22936852  T
Q  380 acataaatcaattc 393  Q
    ||||||||||||||    
T  22936851 acataaatcaattc 22936838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 31246465 - 31246360
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| |||||  ||| |||||||||||||||  || | |||||||||  || || | |||| |||||||||| | |||| ||||||||||||||||    
T  31246465 attttggtaattatgcatttaaaatcaattttgatccaagttatccaaacaacatgaatttataagaatcacttttgctttaaggtatccaaacataaat 31246366  T
Q  388 caattc 393  Q
    ||||||    
T  31246365 caattc 31246360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 33627168 - 33627079
Alignment:
Q  304 attcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||||||| ||||||||| |||  |||||||||  || ||||||||| |||||||||||    | |||||||||||||||||||||||    
T  33627168 attcaaaatcgattttgattcaaactatccaaacaacattaactcataagaatcacttttagtaaagtgtatccaaacataaatcaattc 33627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 41289192 - 41289103
Alignment:
Q  304 attcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||||||||||||||||| |||  |||||||||  ||||||  |||| |||||||||||    | |||||||||||||||||||||||    
T  41289192 attcaaaatcaattttgattcaaactatccaaacaacatcaacctataagaatcacttttagtaaagtgtatccaaacataaatcaattc 41289103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 22552890 - 22552786
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    ||||| || |||||| || |||||||||||||  || |||  |||||||||  || || | |||| ||||||||||||| ||||| ||||||||||||||    
T  22552890 attttagtaattatacatccaaaatcaattttagttgaaagtatccaaacaacatgaattgataataatcacttttacaataatgcatccaaacataaat 22552791  T
Q  388 caatt 392  Q
    |||||    
T  22552790 caatt 22552786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 26243014 - 26243100
Alignment:
Q  253 aatgagatatttaattttaaatacaatt-aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaaca 338  Q
    ||||||||||||| |||||||||||||| |||| ||| ||||||  |||   |||||||||||||||||||| |||  |||||||||    
T  26243014 aatgagatatttacttttaaatacaattaaaagaatagtttggtttttacgcattcaaaatcaattttgattcaaactatccaaaca 26243100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 393
Target Start/End: Complemental strand, 42143486 - 42143409
Alignment:
Q  316 ttttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||| || |||| |||||||||   ||||||||||| ||||||||||| || | | |||||||||||||||||||||    
T  42143486 ttttgtttcaaattatccaaacaacgtcaactcataagaatcacttttaaataagtttatccaaacataaatcaattc 42143409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 385
Target Start/End: Complemental strand, 45147383 - 45147303
Alignment:
Q  305 ttcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataa 385  Q
    ||||||||||||||||||| || | || |||||| |||||||| |||| ||||||||||| || |  || |||||||||||    
T  45147383 ttcaaaatcaattttgattcaagttattcaaacaatatcaacttataagaatcacttttaaatgagagtgtccaaacataa 45147303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 391
Target Start/End: Original strand, 11126494 - 11126578
Alignment:
Q  307 caaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaat 391  Q
    |||| |||||||||||| |||  |||||||||  |  ||||||| |||||||||| |  || | |||||||||||||||||||||    
T  11126494 caaactcaattttgattcaaactatccaaacaacacaaactcatgaaaatcacttatttataagtgtatccaaacataaatcaat 11126578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 8e-34; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 253 - 393
Target Start/End: Original strand, 3375426 - 3375567
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||  | |||||||||||||||||||  ||||||||||||||  ||| |||||||    
T  3375426 aatgagatatttaattttaaatacaattaaaaggataatttggtcattgcacattcaaaatcaattttgatccaaatcatccaaacaacatcgactcata 3375525  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | |||||||||||  | | |||||||||||| ||||||||||    
T  3375526 agaatcacttttaagtgagtgtatccaaacacaaatcaattc 3375567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 385
Target Start/End: Original strand, 9456024 - 9456174
Alignment:
Q  240 aataattatataaaatga----gatatttaattttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatcca 334  Q
    ||||||||| ||||||||    |||||||| |||||||||||||||||  |||| |||||||||| || |||||||||||||||||||| |||  |||||    
T  9456024 aataattatctaaaatgaaaatgatatttagttttaaatacaattaaaaagataatttggtcattttacattcaaaatcaattttgattcaaactatcca 9456123  T
Q  335 aacattatcaactcataaaaatcacttttacattaatgtatccaaacataa 385  Q
    ||||  |||||||||||| ||||||||||| |  | |||||||||||||||    
T  9456124 aacaagatcaactcataagaatcacttttaaacaagtgtatccaaacataa 9456174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 3622633 - 3622492
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||| || |||||||||||||| ||||| |||| || ||| | ||| |||||||||||||||||| |  |||||||||  |||||||| ||    
T  3622633 aatgagatatttacttctaaatacaattaaaaggatactttgatcgttacacatttaaaatcaattttgatttatactatccaaacaacatcaactcgta 3622534  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | |||||||||||  | | |||||||||||||||||||||||    
T  3622533 agaatcacttttaagtaagtgtatccaaacataaatcaattc 3622492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 34366154 - 34366014
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||||||||||| ||| ||||| || || |||||||||||    ||||||||||||||| ||| |||  |||||||||  |||||||||||    
T  34366154 aatgagatatttaattttaaacacagttaaaagggtaatttggtcattacgccttcaaaatcaatttttattcaaactatccaaacaacatcaactcata 34366055  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||||||||| || |  ||||||||||||||||||||||    
T  34366054 aaaatcactttta-ataagcgtatccaaacataaatcaattc 34366014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 364
Target Start/End: Complemental strand, 12632248 - 12632144
Alignment:
Q  261 atttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcac 359  Q
    ||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| |||  || ||||||  |||||||||||| ||||||    
T  12632248 atttagttttaaatacaattaaaaggatattttggtcattacacattcaaaatcaattttgattcaaacaattcaaacaacatcaactcataagaatcac 12632149  T
Q  360 tttta 364  Q
    |||||    
T  12632148 tttta 12632144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 3342755 - 3342867
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| ||||||||||| |||||||||||||||||||||| |||  || ||||||  |||||||||||| |||||||| ||    | ||||||||||    
T  3342755 aaaggatagtttggtcattacatattcaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctattaaagtgtatccaaa 3342854  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  3342855 cataaatcaattc 3342867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 37562535 - 37562647
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| ||||||||||| | || ||||||||||||| ||| |||  |||||||||  |||||||||||  ||||||||||| || | ||||||||||    
T  37562535 aaaggatagtttggtcattacacatacaaaatcaattttcattcaaactatccaaacaacatcaactcatatgaatcacttttaaataagtgtatccaaa 37562634  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  37562635 cataaatcaattc 37562647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 393
Target Start/End: Complemental strand, 39391306 - 39391169
Alignment:
Q  257 agatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaa 355  Q
    ||||||||| ||||||||||||||||| ||||| || |||||||| |  ||||||||||||||||||| |||  || ||||||  ||||| |||||| ||    
T  39391306 agatatttacttttaaatacaattaaaaggatagttaggtcattacacgttcaaaatcaattttgattcaaactattcaaacaacatcaattcataagaa 39391207  T
Q  356 tcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||| ||    | |||||||||||||||||||||||    
T  39391206 tcacttgtaagaaagtgtatccaaacataaatcaattc 39391169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 40903304 - 40903200
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| |||||| || |||||||||||||||||| ||  |||||||||  || || | ||||||||||||||||| ||||| ||||||||||||||     
T  40903304 attttggtaattatacatccaaaatcaattttgatttgaactatccaaacaacatgaattgataaaaatcacttttactttaatatatccaaacataaac 40903205  T
Q  388 caatt 392  Q
    |||||    
T  40903204 caatt 40903200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 393
Target Start/End: Complemental strand, 43738103 - 43737971
Alignment:
Q  262 tttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcact 360  Q
    |||| ||| ||||||||||||| || || ||||||||||  | |||||||||||||||||||| |||  |||||||||  ||| |||||||| |||||||    
T  43738103 tttactttaaaatacaattaaaaggttaatttggtcatttcacattcaaaatcaattttgattcaaactatccaaacaacatccactcataagaatcact 43738004  T
Q  361 tttacattaatgtatccaaacataaatcaattc 393  Q
    |||| || | | |||||||||| ||||||||||    
T  43738003 tttaaataagtttatccaaacaaaaatcaattc 43737971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 44967543 - 44967431
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| ||||||||||| | | |||||||||||||||||| |||| |||||||||  |||||||||||| |||||||| ||    | ||||| ||||    
T  44967543 aaaggataatttggtcattacaaactcaaaatcaattttgattcaaattatccaaacaacatcaactcataagaatcacttctattaaagtgtattcaaa 44967444  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  44967443 cataaatcaattc 44967431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 393
Target Start/End: Original strand, 38230018 - 38230145
Alignment:
Q  267 ttttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    ||||||||||||||||| ||||| ||| ||||||| | ||| |||||||||||||||| |||  |||||||||  |||||| || |  |||||||||||     
T  38230018 ttttaaatacaattaaatggatagtttagtcattacacatttaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaa 38230117  T
Q  366 attaatgtatccaaacataaatcaattc 393  Q
       |||||||||||||||||||||||||    
T  38230118 taaaatgtatccaaacataaatcaattc 38230145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 273 - 392
Target Start/End: Complemental strand, 34011115 - 34010994
Alignment:
Q  273 atacaattaaagg-atattttggtcattatatattcaaaatcaattttgatttaaatcatcc-aaacattatcaactcataaaaatcacttttacattaa 370  Q
    ||||||||||||| ||||| ||||||||| |  |||||||||||||||||||||||  | || |||||  |||||||||||| |||||||||||  | ||    
T  34011115 atacaattaaagggatattgtggtcattacacgttcaaaatcaattttgatttaaagtaccccaaacaacatcaactcataagaatcacttttaagtgaa 34011016  T
Q  371 tgtatccaaacataaatcaatt 392  Q
    ||| ||||||||||||| ||||    
T  34011015 tgtttccaaacataaattaatt 34010994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 393
Target Start/End: Original strand, 48459646 - 48459787
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    |||| |||||||||||||||||| ||||||| ||||| ||||||||||| | | | |||||||||||| ||  | |  |||||||||  ||| | |||||    
T  48459646 aatgggatatttaattttaaatataattaaaaggatagtttggtcattacacacttaaaatcaattttaatacatactatccaaacaacatccattcata 48459745  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | |||||||||||  | | |||||||||||||||||||||||    
T  48459746 agaatcacttttaagtaagtgtatccaaacataaatcaattc 48459787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 392
Target Start/End: Original strand, 42740328 - 42740468
Alignment:
Q  253 aatgagatatttaattttaaatacaatt-aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||| ||||||||| |||| ||| |||| ||||||||||| | | | |||||||||||||||  | |  ||||||||| ||||||| ||||    
T  42740328 aatgagatatttacttttaaatataattaaaatgatactttggtcattacacacttaaaatcaattttgatacatactatccaaacaatatcaacacata 42740427  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaatt 392  Q
    | |||||||||||  | | | |||| |||||||||||||||    
T  42740428 agaatcacttttaagtaagtatatctaaacataaatcaatt 42740468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 47301730 - 47301622
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    |||||||| |||| ||||||||| ||||||| ||||| ||| |||||| || |||||||||||||||||||| |||  |||||||||  |||||| ||||    
T  47301730 aatgagatgtttagttttaaatataattaaaaggataatttagtcattttacattcaaaatcaattttgattcaaactatccaaacaacatcaacccata 47301631  T
Q  352 aaaatcact 360  Q
    | |||||||    
T  47301630 agaatcact 47301622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 393
Target Start/End: Original strand, 47021862 - 47021996
Alignment:
Q  260 tatttaattttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatca 358  Q
    |||||| |||||||||||||||||  |||| ||||||||||  | |||||||||||||||| ||| |||| |||||||||  ||||| || ||| |||||    
T  47021862 tatttacttttaaatacaattaaaatgataatttggtcattgcacattcaaaatcaattttcattcaaattatccaaacaacatcaattcgtaagaatca 47021961  T
Q  359 cttttacattaatgtatccaaacataaatcaattc 393  Q
    | | ||    | |||||||||||||||||||||||    
T  47021962 catctagtaaagtgtatccaaacataaatcaattc 47021996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 385
Target Start/End: Original strand, 19095889 - 19096005
Alignment:
Q  269 ttaaatacaattaaagga-tattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    ||||||||||||||| || || ||||||||||  || ||||||||||||||||||| |||| |||||||||  || ||||||||| ||||| ||||| |     
T  19095889 ttaaatacaattaaaagagtaatttggtcatttaatgttcaaaatcaattttgattcaaattatccaaacaacat-aactcataagaatcatttttaaac 19095987  T
Q  368 taatgtatccaaacataa 385  Q
     | |||||||||||||||    
T  19095988 gagtgtatccaaacataa 19096005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 385
Target Start/End: Original strand, 48134557 - 48134649
Alignment:
Q  293 ggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataa 385  Q
    |||||||| | |||||||||||||||||||| |||  |||||||||  ||||||| |||||||||||||||| |  | | |||||||||||||    
T  48134557 ggtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaacttataaaaatcacttttaaacaagtttatccaaacataa 48134649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 386635 - 386513
Alignment:
Q  271 aaatacaattaaaggatattttggtcattatatattcaaaa-tcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacatta 369  Q
    ||||| ||| |||||||| ||||||||||||| ||| |||| |||||||||||| ||   |||||||||  ||||| |||||| ||||||||||   |||    
T  386635 aaatagaataaaaggataatttggtcattatacatttaaaaatcaattttgattcaatctatccaaacaacatcaa-tcataagaatcacttttcggtta 386537  T
Q  370 atgtatccaaacataaatcaattc 393  Q
     | |||||||||||||||||||||    
T  386536 gtatatccaaacataaatcaattc 386513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 392
Target Start/End: Original strand, 1766398 - 1766501
Alignment:
Q  289 ttttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatc 388  Q
    ||||||| |||| | | |||||||||||||| ||| |||| || ||||||| ||||| | |||| |||||||||||  |||| ||||||||| |||||||    
T  1766398 ttttggtaattacacactcaaaatcaattttaattcaaattattcaaacatcatcaattgataagaatcacttttatgttaaggtatccaaatataaatc 1766497  T
Q  389 aatt 392  Q
    ||||    
T  1766498 aatt 1766501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 393
Target Start/End: Complemental strand, 10372116 - 10371990
Alignment:
Q  267 ttttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttaca 366  Q
    |||||||||||||||||||||  ||| |||||||   |||||||||||||||||||| |||  |||| ||||  |||||| || || |||||||| || |    
T  10372116 ttttaaatacaattaaaggatggtttagtcattacgcattcaaaatcaattttgattcaaactatccgaacaacatcaacccacaagaatcacttcta-a 10372018  T
Q  367 ttaa-tgtatccaaacataaatcaattc 393  Q
    | || |||| ||||||||||||||||||    
T  10372017 taaactgtaaccaaacataaatcaattc 10371990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 385
Target Start/End: Original strand, 34010292 - 34010409
Alignment:
Q  269 ttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    ||||||| ||||||| || || ||||||||||  || |||||||| |||||||||| |||  |||||||||  |||||||||||| || |||||||| ||    
T  34010292 ttaaatataattaaaagggtaatttggtcatttaatgttcaaaattaattttgattcaaactatccaaacaacatcaactcataagaaccacttttaaat 34010391  T
Q  368 taatgtatccaaacataa 385  Q
     | ||||| |||||||||    
T  34010392 gagtgtattcaaacataa 34010409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 266 - 393
Target Start/End: Original strand, 3750636 - 3750763
Alignment:
Q  266 attttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactttta 364  Q
    ||||| |||||||||||| ||||| ||||||||||| | ||| ||||| ||||||||||||||  |||||||||  ||||| |||||| | ||| || ||    
T  3750636 atttttaatacaattaaaaggatagtttggtcattacacatt-aaaattaattttgatttaaactatccaaacaacatcaattcataagattcaattata 3750734  T
Q  365 cattaatgtatccaaacataaatcaattc 393  Q
        | |||||||||||||||||||||||    
T  3750735 ttaaagtgtatccaaacataaatcaattc 3750763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 267 - 393
Target Start/End: Original strand, 37639380 - 37639507
Alignment:
Q  267 ttttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    ||||||||||||||||| ||||| ||| ||||||| | ||| ||||| |||||||||| |||  |||||||||  |||||| || || |||||||||||     
T  37639380 ttttaaatacaattaaaaggatagtttagtcattacacatttaaaattaattttgattcaaactatccaaacaacatcaacccacaagaatcactttta- 37639478  T
Q  366 attaa-tgtatccaaacataaatcaattc 393  Q
    || || | | |||||||||||||||||||    
T  37639479 ataaagtttctccaaacataaatcaattc 37639507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 47217685 - 47217573
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| ||| |||||| ||  ||||||||||||||| ||| |||  |||||||||  |||||| ||| |||||||||||||    | || |||||||    
T  47217685 aaaggataatttagtcattgtacgttcaaaatcaattttaattcaaactatccaaacaacatcaacccatcaaaatcacttttaagcgagtgcatccaaa 47217586  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  47217585 cataaatcaattc 47217573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 392
Target Start/End: Complemental strand, 36920325 - 36920211
Alignment:
Q  278 attaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatcc 377  Q
    |||||| |||| | ||||||||||||||||  |||||||||||||| ||   | |||||||  ||||||||| || |||||| ||||  | || |||| |    
T  36920325 attaaaagataatatggtcattatatattcgcaatcaattttgattcaatgtacccaaacaacatcaactcaaaagaatcacctttaattaaacgtattc 36920226  T
Q  378 aaacataaatcaatt 392  Q
    |||||||||||||||    
T  36920225 aaacataaatcaatt 36920211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 42752312 - 42752223
Alignment:
Q  304 attcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||||||||||||||| ||| | |||||||||  || || | |||| ||| | |||| | |||| ||||||||||||||||||||||    
T  42752312 attcaaaatcaattttgatctaagttatccaaacaacatgaatttataagaattatttttgctttaaggtatccaaacataaatcaattc 42752223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 297 - 364
Target Start/End: Complemental strand, 43631823 - 43631756
Alignment:
Q  297 attatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactttta 364  Q
    |||||| ||||| |||||||||||||| ||   ||||||||| |||||||||| || |||||||||||    
T  43631823 attatacattcacaatcaattttgattcaatatatccaaacaatatcaactcaaaagaatcactttta 43631756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 393
Target Start/End: Original strand, 32205953 - 32206002
Alignment:
Q  344 aactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||||| |||||||||||  | | |||||||||||||||||||||||    
T  32205953 aactcataagaatcacttttaagtaagtgtatccaaacataaatcaattc 32206002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 39634302 - 39634197
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| |||||  |||||||||||||||||||  || | |||||||||  |  || | |||| ||||||||||   ||||  |||||||||||||||    
T  39634302 attttggtaattatgcattcaaaatcaattttgatccaagttatccaaacaacaagaatttataagaatcacttttgttttaagttatccaaacataaat 39634203  T
Q  388 caattc 393  Q
    ||||||    
T  39634202 caattc 39634197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 389
Target Start/End: Complemental strand, 40561768 - 40561735
Alignment:
Q  356 tcacttttacattaatgtatccaaacataaatca 389  Q
    |||||||||||| |||||||||||||||||||||    
T  40561768 tcacttttacatgaatgtatccaaacataaatca 40561735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 2839263 - 2839367
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| |||||| ||||||||  |||||||| | |||  ||||||||| | | || | | || ||||||||||   |||||| ||||||||||||||    
T  2839263 attttggtaattatacattcaaaaataattttgactcaaagtatccaaacaatttaaattaacaagaatcacttttgacttaatgaatccaaacataaat 2839362  T
Q  388 caatt 392  Q
    |||||    
T  2839363 caatt 2839367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 11341978 - 11342030
Alignment:
Q  287 tattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacat 339  Q
    |||||| || |||||| |||||||| ||||||||||  |||||||||||||||    
T  11341978 tattttagtaattatacattcaaaaacaattttgatcaaaatcatccaaacat 11342030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 46285477 - 46285373
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| |||||| |  |||||||||| || ||| |||  |||||||||| ||  | |  ||| ||||||||| | ||||||||||||||||||||||    
T  46285477 attttggtaattatacaagcaaaatcaatcttaattcaaactatccaaacatcatatattgctaagaatcactttcatattaatgtatccaaacataaat 46285378  T
Q  388 caatt 392  Q
     ||||    
T  46285377 taatt 46285373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 7e-31; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 253 - 392
Target Start/End: Original strand, 5410579 - 5410718
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||||| ||||| |||  |||||||||  ||||| |||||    
T  5410579 aatgagatatttacttttaaatacaattaaaaggatagtttggtcattacatattcaaaatcaattatgattcaaactatccaaacaacatcaagtcata 5410678  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaatt 392  Q
    | ||||||||||| | || ||||| ||||||||||||||||    
T  5410679 agaatcactttta-agtagtgtattcaaacataaatcaatt 5410718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 252 - 393
Target Start/End: Complemental strand, 4369990 - 4369848
Alignment:
Q  252 aaatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcat 350  Q
    ||||| ||||| |||||||||||||||||||| ||||| ||||||||||| | ||| |||||||||||||||| ||   |||||||||  ||||||||||    
T  4369990 aaatgggatatataattttaaatacaattaaaaggataatttggtcattacacatttaaaatcaattttgattcaacctatccaaacaacatcaactcat 4369891  T
Q  351 aaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    || |||||||||||  | |  ||| ||||||||||||||||||    
T  4369890 aagaatcacttttaagtgagggtacccaaacataaatcaattc 4369848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 393
Target Start/End: Original strand, 13055937 - 13056077
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||||||||||| ||| ||||| || || ||| |||||||   |||||||||||||||| ||| |||  ||||||||| ||||||||||||    
T  13055937 aatgagatatttaattttaaacacagttaaaagggtaatttcgtcattacgcattcaaaatcaatttttattcaaactatccaaacaatatcaactcata 13056036  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||||||||| || |  |||| |||||||||||||||||    
T  13056037 aaaatcactttta-ataagcgtattcaaacataaatcaattc 13056077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 12468181 - 12468291
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| |||||||||| || |||||||||||||||||||| |||  |||||||||  |||||||||||||||||||||||| |  | ||||||||||    
T  12468181 aaaggataatttggtcattgtacattcaaaatcaattttgattcaaactatccaaaca-aatcaactcataaaaatcacttttaaaaaagtgtatccaaa 12468279  T
Q  381 cataaatcaatt 392  Q
     |||||||||||    
T  12468280 tataaatcaatt 12468291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 42850388 - 42850265
Alignment:
Q  271 aaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacatta 369  Q
    ||||||||||||| ||||| |||||||| || | ||||||||||||||||||| ||||  |||||||||  |||||||||||| |||||||||||    |    
T  42850388 aaatacaattaaaaggataatttggtcaatacacattcaaaatcaattttgatgtaaaatatccaaacaacatcaactcataagaatcacttttaaggaa 42850289  T
Q  370 atgtatccaaacataaatcaattc 393  Q
     |||||||||||||||||||||||    
T  42850288 gtgtatccaaacataaatcaattc 42850265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 269 - 385
Target Start/End: Original strand, 12247375 - 12247492
Alignment:
Q  269 ttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    ||||||||||||||| || || ||||||||||  || ||||||||||||||||||| ||||  ||||||||  |||||||||||||||||||||||| |     
T  12247375 ttaaatacaattaaaagggtaatttggtcatttaatgttcaaaatcaattttgattcaaattctccaaacaacatcaactcataaaaatcacttttaaac 12247474  T
Q  368 taatgtatccaaacataa 385  Q
     | |||||||||||||||    
T  12247475 aagtgtatccaaacataa 12247492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 50977526 - 50977386
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||||||||||| ||| ||||| || || ||| ||||||| | |||||||||||||||| ||| |||  ||||||||| |||| |||||||    
T  50977526 aatgagatatttaattttaaacacagttaaaagggtaatttagtcattacacattcaaaatcaatttttattcaaactatccaaacaatatctactcata 50977427  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||||||| || || |  ||||||||||||||| ||||||    
T  50977426 aaaatcacttgta-ataagcgtatccaaacataaaacaattc 50977386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 7826541 - 7826400
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    |||| ||||| |||||||||||||||||||| |||||  |||||||||| | ||| |||||||||||||||| ||   |||||||||  ||||| |||||    
T  7826541 aatgggatatctaattttaaatacaattaaaaggataacttggtcattacacatttaaaatcaattttgattcaacctatccaaacaacatcaattcata 7826442  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | |||||||||||  | |  ||| ||||||||||||||||||    
T  7826441 agaatcacttttaagtgagggtacccaaacataaatcaattc 7826400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 385
Target Start/End: Original strand, 35536027 - 35536144
Alignment:
Q  269 ttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    ||||||||||||||| || || ||||||||||  || ||||||||||||||||||| |||| |||||||||  |||||||||||| ||||||||||| |     
T  35536027 ttaaatacaattaaaagggtaatttggtcatttaatgttcaaaatcaattttgattcaaattatccaaacaacatcaactcataagaatcacttttaaac 35536126  T
Q  368 taatgtatccaaacataa 385  Q
     | |||||| ||||||||    
T  35536127 gagtgtatctaaacataa 35536144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 393
Target Start/End: Complemental strand, 40229653 - 40229516
Alignment:
Q  257 agatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaa 355  Q
    ||||||||| ||| |||||| |||||| ||||| ||||||||||| |  ||||||||||||||||||| |||| |||||||||  ||||||||| || ||    
T  40229653 agatatttactttcaaatactattaaaaggatagtttggtcattacacgttcaaaatcaattttgattcaaattatccaaacaacatcaactcagaagaa 40229554  T
Q  356 tcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||| | ||    | |||||||||||||||||||||||    
T  40229553 tcacctgtaagaaagtgtatccaaacataaatcaattc 40229516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 393
Target Start/End: Complemental strand, 20800450 - 20800323
Alignment:
Q  267 ttttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    ||||||||||||||||| ||||| ||| ||||||||| ||||||||||||| |||||| |||  |||||||||  |||||| || |  |||||||||||     
T  20800450 ttttaaatacaattaaaaggataatttagtcattatacattcaaaatcaatattgattcaaactatccaaacaacatcaacccacatgaatcactttta- 20800352  T
Q  366 attaa-tgtatccaaacataaatcaattc 393  Q
    || || |||||||||||||||||||||||    
T  20800351 ataaagtgtatccaaacataaatcaattc 20800323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 308 - 392
Target Start/End: Original strand, 25061221 - 25061305
Alignment:
Q  308 aaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaatt 392  Q
    |||||||||||||||| |||| |||||||||| ||||| | |||| |||||||||||  |||| |||||||||||||||||||||    
T  25061221 aaaatcaattttgattcaaattatccaaacatcatcaattgataagaatcacttttatgttaaggtatccaaacataaatcaatt 25061305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 31223342 - 31223454
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| ||||||||||| | |||||||||||||||| ||| |||  |||||||||  |||||||||||| |||||||| ||    | ||||||||||    
T  31223342 aaaggatagtttggtcattacacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtgtatccaaa 31223441  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  31223442 cataaatcaattc 31223454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 393
Target Start/End: Complemental strand, 35569375 - 35569248
Alignment:
Q  267 ttttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    |||||||||||||||||  |||| ||| ||||||||| |||||||||||||||||||| |||  |||||||||  |||||| || |  |||||||||||     
T  35569375 ttttaaatacaattaaaatgatagtttagtcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcactttta- 35569277  T
Q  366 attaa-tgtatccaaacataaatcaattc 393  Q
    || || |||||||||||||||||||||||    
T  35569276 ataaagtgtatccaaacataaatcaattc 35569248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 385
Target Start/End: Complemental strand, 43729035 - 43728931
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    ||||| || ||||||||||  |||||||||||||||||||||| |||  |||||||||  |||||||||||| ||||||||||| || | | ||||||||    
T  43729035 aaagggtaatttggtcatttaatattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaataagtttatccaaa 43728936  T
Q  381 cataa 385  Q
    |||||    
T  43728935 cataa 43728931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 288 - 393
Target Start/End: Original strand, 15884201 - 15884307
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcac-ttttacattaatgtatccaaacataaa 386  Q
    |||||||| |||||  |||||||||||||||||||  |||  |||||||||  || || | ||||||||||| |||||| ||| ||||||||||||||||    
T  15884201 attttggtaattatgcattcaaaatcaattttgatccaaactatccaaacaacatgaatttataaaaatcactttttactttattgtatccaaacataaa 15884300  T
Q  387 tcaattc 393  Q
    |||||||    
T  15884301 tcaattc 15884307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 358
Target Start/End: Original strand, 31933684 - 31933772
Alignment:
Q  271 aaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatca 358  Q
    ||||||||||||| ||||| |||||||| || | ||||||||||||||||||| ||||  |||||||||  |||||||||||| |||||    
T  31933684 aaatacaattaaaaggataatttggtcaatacacattcaaaatcaattttgatgtaaaatatccaaacaacatcaactcataagaatca 31933772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 361
Target Start/End: Original strand, 6464577 - 6464656
Alignment:
Q  282 aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactt 361  Q
    ||||||| ||| ||||||| | |||||||||||||||||||| |||  |||||||||  |||||||||||| ||||||||    
T  6464577 aaggataatttagtcattagacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcactt 6464656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 385
Target Start/End: Complemental strand, 11023498 - 11023383
Alignment:
Q  271 aaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacatta 369  Q
    ||||||||||||| || ||  ||||||||||   ||| |||||||||||||||| |||  | ||||||| ||||||||| ||||||| |||||||  | |    
T  11023498 aaatacaattaaaagggtaagttggtcattacccatttaaaatcaattttgattcaaactacccaaacaatatcaactcgtaaaaattacttttaattga 11023399  T
Q  370 atgtatccaaacataa 385  Q
    ||||||||||||||||    
T  11023398 atgtatccaaacataa 11023383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 361
Target Start/End: Original strand, 45710018 - 45710097
Alignment:
Q  282 aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactt 361  Q
    ||||||| ||| ||||||| | |||||||||||||||||||| |||  |||||||||  |||||||||||| ||||||||    
T  45710018 aaggataatttagtcattagacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcactt 45710097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 361
Target Start/End: Original strand, 10470519 - 10470638
Alignment:
Q  240 aataattatataaaatgagatatttaattttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacat 339  Q
    ||||||||| ||||||||  |||||| ||||||  ||| |  ||||||| ||| |||| |||| |||||||||||||||| ||| |||  |||||||||     
T  10470519 aataattatctaaaatga--tatttatttttaataacattagaaggataatttagtcactatacattcaaaatcaattttaattcaaactatccaaacaa 10470616  T
Q  340 tatcaactcataaaaatcactt 361  Q
     |||||||||||| ||||||||    
T  10470617 catcaactcataagaatcactt 10470638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 11051497 - 11051411
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaaca 338  Q
    ||||||||||||  ||||||||| ||||||| ||||| ||||||||||| | |||||||||||||||| ||| |||  |||||||||    
T  11051497 aatgagatattttgttttaaatataattaaaaggataatttggtcattacacattcaaaatcaatttttattcaaactatccaaaca 11051411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 393
Target Start/End: Original strand, 48510847 - 48510988
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||| ||||||||| ||| ||| ||||| |||| |||||| | | | |||||||||||||||  | |  || ||||||  ||||| |||||    
T  48510847 aatgagatatttacttttaaatataatcaaaaggatagtttgatcattacacacttaaaatcaattttgatacatactattcaaacaacatcaattcata 48510946  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | |||||||||||    | |||||||||||||||||||||||    
T  48510947 agaatcacttttaagcaagtgtatccaaacataaatcaattc 48510988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 393
Target Start/End: Original strand, 36205128 - 36205271
Alignment:
Q  251 aaaatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactca 349  Q
    |||||||| | |||| ||| ||||||||||||| || || ||||||||||| | |||||||||||||||||||| |||  |||||| ||  ||  ||||     
T  36205128 aaaatgaggtgtttactttaaaatacaattaaaaggttaatttggtcattaaacattcaaaatcaattttgattcaaactatccaagcaacattcactcg 36205227  T
Q  350 taaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||| ||||||||||| || | | ||||||| || ||| ||||||    
T  36205228 taagaatcacttttaaataagtttatccaatcaaaaaccaattc 36205271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 385
Target Start/End: Original strand, 6166088 - 6166182
Alignment:
Q  291 ttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataa 385  Q
    ||||||||||   ||| |||||||||||||||| |||  | |||||||  |||||||| ||| ||||||||||| || | |||||||||||||||    
T  6166088 ttggtcattacccatttaaaatcaattttgattcaaactacccaaacaacatcaactcctaagaatcacttttaaatgagtgtatccaaacataa 6166182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 392
Target Start/End: Complemental strand, 23628877 - 23628752
Alignment:
Q  267 ttttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttaca 366  Q
    |||||||||||||||||    |||||| | ||||||  |||||||  |||||||||| ||| || |||||||  || || | |||| ||||| |||||      
T  23628877 ttttaaatacaattaaaacccattttgataattatactttcaaaagtaattttgattcaaaccacccaaacaacataaattgataagaatcaattttagg 23628778  T
Q  367 ttaatgtatccaaacataaatcaatt 392  Q
    ||| ||||||||||||||||||||||    
T  23628777 ttattgtatccaaacataaatcaatt 23628752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 361
Target Start/End: Original strand, 25229975 - 25230055
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactt 361  Q
    |||||||| ||||||||||| | | |||||||||||||| ||| |||  |||||||||  ||||||| |||| ||||||||    
T  25229975 aaaggataatttggtcattacacactcaaaatcaattttcattcaaactatccaaacaacatcaactaataagaatcactt 25230055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 31933638 - 31933670
Alignment:
Q  251 aaaatgagatatttaattttaaatacaattaaa 283  Q
    |||||||||||||||||||||||||||||||||    
T  31933638 aaaatgagatatttaattttaaatacaattaaa 31933670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 42850434 - 42850402
Alignment:
Q  251 aaaatgagatatttaattttaaatacaattaaa 283  Q
    |||||||||||||||||||||||||||||||||    
T  42850434 aaaatgagatatttaattttaaatacaattaaa 42850402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 392
Target Start/End: Complemental strand, 43730194 - 43730091
Alignment:
Q  289 ttttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatc 388  Q
    ||||||| ||||||  ||||||| |||||||||| | || ||||||||||  || || | |||| |||||||| | ||| || ||||||||||| |||||    
T  43730194 ttttggtaattataccttcaaaaacaattttgatctcaaccatccaaacaaaataaattaataagaatcacttatgcataaaggtatccaaacacaaatc 43730095  T
Q  389 aatt 392  Q
    ||||    
T  43730094 aatt 43730091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 1199819 - 1199907
Alignment:
Q  305 ttcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaa-tgtatccaaacataaatcaattc 393  Q
    ||||||||||||||||||| |||  |||||||||  |||||  || || |||||||| || || || |||||||||||||||||||||||    
T  1199819 ttcaaaatcaattttgattcaaactatccaaacaacatcaatccacaagaatcacttcta-ataaagtgtatccaaacataaatcaattc 1199907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 13931605 - 13931657
Alignment:
Q  295 tcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaact 347  Q
    |||||| |||||||||||||||||||||| |||  |||||||||  |||||||    
T  13931605 tcattacatattcaaaatcaattttgattcaaactatccaaacaacatcaact 13931657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 8393 - 8505
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| |||||||||| || |||||||||||||||||||| |||  |||||||||  |||||||||||||||||| ||||| |  | ||||||||||    
T  8393 aaaggataatttggtcattgtacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataaaaatcatttttaaaaaagtgtatccaaa 8492  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  8493 cataaatcaattc 8505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 267 - 385
Target Start/End: Complemental strand, 7472843 - 7472724
Alignment:
Q  267 ttttaaatacaatta-aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    |||||| |||||||| ||||||| |||||||||| || |||||||||||||||||||| |||  |||||||||  |||||||||||| |||||||||||     
T  7472843 ttttaattacaattacaaggataatttggtcattttacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaa 7472744  T
Q  366 attaatgtatccaaacataa 385  Q
    || | |||||||||||||||    
T  7472743 ataagtgtatccaaacataa 7472724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 393
Target Start/End: Original strand, 2213467 - 2213571
Alignment:
Q  289 ttttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatc 388  Q
    ||||||||||| || ||| |||||||||||||||| |||  ||||||||| |||||||| ||||||||||||||||  | | ||||||||||||||||||    
T  2213467 ttttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatc 2213566  T
Q  389 aattc 393  Q
    |||||    
T  2213567 aattc 2213571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 7296108 - 7296220
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| || ||||||||||||||||||||||||||||| |||||  ||||||| |  ||||| |||| | ||||||||||| || | ||||||||||    
T  7296108 aaaggataattcggtcattatatattcaaaatcaattttgacttaaactatccaaataacatcaagtcatgataatcacttttatatgagtgtatccaaa 7296207  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  7296208 cataaatcaattc 7296220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 18511062 - 18511166
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| |||||  ||||||||||||||||||||||||| |||||||||  ||||  | |||| ||||| ||||||||| ||||||||||||||||||    
T  18511062 attttggtaattatgcattcaaaatcaattttgatttaaattatccaaacaacatcactttataagaatcatttttacattgatgtatccaaacataaat 18511161  T
Q  388 caatt 392  Q
    |||||    
T  18511162 caatt 18511166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 393
Target Start/End: Complemental strand, 28127433 - 28127330
Alignment:
Q  290 tttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatca 389  Q
    |||||||||| || ||| |||||||||||||||| |||  ||||||||| |||||||| ||||||||||||||||  | | |||||||||||||||||||    
T  28127433 tttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatca 28127334  T
Q  390 attc 393  Q
    ||||    
T  28127333 attc 28127330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 269 - 392
Target Start/End: Complemental strand, 7295514 - 7295392
Alignment:
Q  269 ttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    |||||| |||||||| ||||| || ||||||||||||||||||||||| ||||| |||||  |||||||||  |||||||||| | ||||||||||| ||    
T  7295514 ttaaatgcaattaaaaggataattcggtcattatatattcaaaatcaagtttgacttaaactatccaaacaacatcaactcatgataatcacttttatat 7295415  T
Q  368 taatgtatccaaacataaatcaatt 392  Q
       ||||||||||||||||||||||    
T  7295414 --gtgtatccaaacataaatcaatt 7295392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 240 - 393
Target Start/End: Original strand, 28641551 - 28641707
Alignment:
Q  240 aataattatataaaatgaga--tatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaa 336  Q
    ||||||||| ||||||||||  ||| |||||||||||||||||||| ||||| ||||||||||| | ||| |||||||||||| ||| ||   |||||||    
T  28641551 aataattatctaaaatgagagatatctaattttaaatacaattaaaaggataatttggtcattacacatttaaaatcaattttaattcaacatatccaaa 28641650  T
Q  337 cattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||  ||||||| |||| ||||||||||| || ||  || ||||| ||||||||||||    
T  28641651 caacatcaacttataataatcacttttaaatgaagttacccaaatataaatcaattc 28641707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 257 - 393
Target Start/End: Original strand, 36548128 - 36548264
Alignment:
Q  257 agatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaa 355  Q
    ||||||||| ||||||||| ||||||| ||||| ||| |||||| ||  ||||||||||||||| |||||||| |||||||||  |||||| ||||||||    
T  36548128 agatatttagttttaaatataattaaaaggataatttagtcattgtacgttcaaaatcaattttaatttaaattatccaaacaacatcaacccataaaaa 36548227  T
Q  356 tcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||| |||||  | |  ||||||||||||||||||||||    
T  36548228 tca-ttttaagtgagagtatccaaacataaatcaattc 36548264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 9988652 - 9988544
Alignment:
Q  285 gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacata 384  Q
    |||| ||||||||||| | |||||||||||||||| ||| |||  |||||||||  |||||||||||  ||||||||||| || | ||||||||||||||    
T  9988652 gatagtttggtcattacacattcaaaatcaattttcattcaaactatccaaacaacatcaactcatatgaatcacttttaaataagtgtatccaaacata 9988553  T
Q  385 aatcaattc 393  Q
    |||||||||    
T  9988552 aatcaattc 9988544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 393
Target Start/End: Complemental strand, 25940414 - 25940284
Alignment:
Q  264 taattttaaatacaatta-aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttt 362  Q
    |||| |||||| |||||| ||||||| |||||||||||||||||||||||||||||||||| |||   ||||||||  |||| ||||||| ||||||||     
T  25940414 taatgttaaatgcaattagaaggataatttggtcattatatattcaaaatcaattttgattcaaactgtccaaacaacatcatctcataataatcacttc 25940315  T
Q  363 tacattaatgtatccaaacataaatcaattc 393  Q
    || |  | ||||| |||| ||||||||||||    
T  25940314 tatacgagtgtattcaaatataaatcaattc 25940284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 26208113 - 26207972
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||  ||||||||||||| ||| ||||| |||||||||| || ||| |||||||||||||||| | || |||||||||  |||||||  ||    
T  26208113 aatgagatatttgcttttaaatacaatcaaaaggatagtttggtcattgtacatttaaaatcaattttgattcatataatccaaacaacatcaacttgta 26208014  T
Q  352 aaaatcacttttacattaa-tgtatccaaacataaatcaattc 393  Q
    | ||||| ||||| ||||| |||||| ||||||||||||||||    
T  26208013 agaatcaatttta-attaagtgtatcaaaacataaatcaattc 26207972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 385
Target Start/End: Complemental strand, 5916411 - 5916292
Alignment:
Q  267 ttttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    ||||||||||||||||| ||||| ||| ||||||| | |||||||||||||||||||| |||  |||||||||  ||||||||| |  |||||||||||     
T  5916411 ttttaaatacaattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcacatgaatcactttta- 5916313  T
Q  366 attaa-tgtatccaaacataa 385  Q
    || || |||||||||||||||    
T  5916312 ataaagtgtatccaaacataa 5916292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 36312215 - 36312334
Alignment:
Q  267 ttttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    ||||||||||||||||| ||||| ||| ||||||| | |||||||||||||||||||| |||  |||||||||  ||||||||| |  |||||||||||     
T  36312215 ttttaaatacaattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcacatgaatcactttta- 36312313  T
Q  366 attaa-tgtatccaaacataa 385  Q
    || || |||||||||||||||    
T  36312314 ataaagtgtatccaaacataa 36312334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 39141615 - 39141520
Alignment:
Q  290 tttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataa 385  Q
    ||||||||||  || ||||||||||||||||||| |||  |||||||||  |||||||||||| ||||| ||||| || | |||||||||||||||    
T  39141615 tttggtcatttaatgttcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcatttttaaatgagtgtatccaaacataa 39141520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 393
Target Start/End: Complemental strand, 44619207 - 44619104
Alignment:
Q  290 tttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatca 389  Q
    |||||||||| || |||||||||| ||||| ||| |||  |||||||||  |||||||||||| ||||| ||||| |  | |||||||||||||||||||    
T  44619207 tttggtcattttacattcaaaatcgattttaattcaaactatccaaacaacatcaactcataataatcatttttaaacaagtgtatccaaacataaatca 44619108  T
Q  390 attc 393  Q
    ||||    
T  44619107 attc 44619104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 39106852 - 39106766
Alignment:
Q  253 aatgagatatttaattttaaatacaatt-aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaaca 338  Q
    ||||||||||||  |||| ||||||||| |||||||| |||||||||| |||||| |||||||||||||||| |||| ||| |||||    
T  39106852 aatgagatattttgtttttaatacaatttaaaggataatttggtcattgtatatttaaaatcaattttgattcaaattatctaaaca 39106766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 2212741 - 2212814
Alignment:
Q  249 ataaaatgagatatttaattttaaatacaatt-aaaggatattttggtcattatatattcaaaatcaattttga 321  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||||||  | ||| ||||||||||||||    
T  2212741 ataaaatgagatatttaattttaaataaaattaaaaggataatttggtcattgcacatttaaaatcaattttga 2212814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 393
Target Start/End: Original strand, 2215216 - 2215317
Alignment:
Q  290 tttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatca 389  Q
    |||||||||| || |||||||||||||| | |||||||| |||||||||  ||||||||  |||||| | ||||| |  | |||||||||||||||||||    
T  2215216 tttggtcattttacattcaaaatcaattctaatttaaattatccaaacaacatcaactc--aaaaattatttttaaacaagtgtatccaaacataaatca 2215313  T
Q  390 attc 393  Q
    ||||    
T  2215314 attc 2215317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 240 - 359
Target Start/End: Original strand, 8170227 - 8170344
Alignment:
Q  240 aataattatataaaatgagatatttaattttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacat 339  Q
    ||||||||| ||||||||  |||||| ||||||  ||| |  ||||||| ||| ||||||||| |||||||||||||||| ||| |||  |||||||||     
T  8170227 aataattatctaaaatga--tatttatttttaataacattagaaggataatttagtcattatacattcaaaatcaattttaattcaaactatccaaacaa 8170324  T
Q  340 tatcaactcataaaaatcac 359  Q
     |||||||||||| ||||||    
T  8170325 catcaactcataagaatcac 8170344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 16467046 - 16467150
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| |||||| ||  ||||| ||||||||| ||||  ||||||||   |||||| ||||| ||||||||||||||||   |||||||||||||||    
T  16467046 attttggtaattatacatcaaaaattaattttgatctaaactatccaaactacatcaacccataagaatcacttttacattatcatatccaaacataaat 16467145  T
Q  388 caatt 392  Q
    |||||    
T  16467146 caatt 16467150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 23358220 - 23358316
Alignment:
Q  290 tttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaa 386  Q
    |||||||||| || |||||||||||||||||||| |||  |||||||||  || ||||||| | ||||||||||| |  | ||||||||||||||||    
T  23358220 tttggtcattttacattcaaaatcaattttgattcaaactatccaaacaacattaactcatcacaatcacttttaaacaagtgtatccaaacataaa 23358316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 31562816 - 31562756
Alignment:
Q  304 attcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactttta 364  Q
    |||||||||||||||||||| |||| ||||||||| ||| ||||||||| |||||||||||    
T  31562816 attcaaaatcaattttgattcaaattatccaaacaatataaactcataagaatcactttta 31562756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 361
Target Start/End: Original strand, 14821117 - 14821196
Alignment:
Q  282 aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactt 361  Q
    ||||||| ||| ||||||| | |||||||||||||||||||| |||  |||||||||  |||||||||||| ||||||||    
T  14821117 aaggataatttagtcattagacattcaaaatcaattttgattcaaaatatccaaacaacatcaactcataagaatcactt 14821196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 385
Target Start/End: Original strand, 32501928 - 32502043
Alignment:
Q  271 aaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacatta 369  Q
    ||||||||||||| || ||  ||||||||||   ||| |||||||||||||||| |||  | ||||||| ||||||||| ||||||| |||||||  | |    
T  32501928 aaatacaattaaaagggtaagttggtcattacccatttaaaatcaattttgattcaaactacccaaacaatatcaactcgtaaaaattacttttaattga 32502027  T
Q  370 atgtatccaaacataa 385  Q
    ||||||||||||||||    
T  32502028 atgtatccaaacataa 32502043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 3853876 - 3853964
Alignment:
Q  304 attcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaatt 392  Q
    |||||||| ||||||||||| |||  |||||||||  ||  | | |||| ||||| |||||||| ||||||||||||||||||||||||    
T  3853876 attcaaaagcaattttgattcaaactatccaaacaacatagattgataagaatcaattttacatgaatgtatccaaacataaatcaatt 3853964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 392
Target Start/End: Complemental strand, 25748053 - 25747925
Alignment:
Q  264 taattttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactttt 363  Q
    ||||||||||||||||||||    |||||| | ||||||  ||||||| ||||||||||| |||  | |||||||  || || | |||| ||||| ||||    
T  25748053 taattttaaatacaattaaaatccattttgataattatactttcaaaagcaattttgattcaaactacccaaacaacataaattgataagaatcaatttt 25747954  T
Q  364 acattaatgtatccaaacataaatcaatt 392  Q
    |  ||| ||||||||||||||||||||||    
T  25747953 aggttattgtatccaaacataaatcaatt 25747925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 28261247 - 28261359
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    ||||||||  |||||||||||| ||| ||||| |||||||||| |||  || ||||||  |||||||||||| |||||||| ||  | |  |||||||||    
T  28261247 aaaggataagttggtcattatacatttaaaattaattttgattcaaactattcaaacaacatcaactcataagaatcacttctatgtgagagtatccaaa 28261346  T
Q  381 cataaatcaattc 393  Q
     ||||||||||||    
T  28261347 tataaatcaattc 28261359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 43858360 - 43858256
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| |||||| |  |||||||||||||  || |||  ||||||||| ||| || | |||| ||||||||| ||| ||||| ||||||||||||||    
T  43858360 attttggtaattatacacccaaaatcaattttagttaaaactatccaaacaatatgaattgataagaatcactttcacaataatgcatccaaacataaat 43858261  T
Q  388 caatt 392  Q
    |||||    
T  43858260 caatt 43858256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 392
Target Start/End: Complemental strand, 3552993 - 3552890
Alignment:
Q  289 ttttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatc 388  Q
    ||||||| |||| | ||| || ||||||||||||| |||| ||||||||| ||| || | |||| ||| ||||  ||||||||||||||| ||||||| |    
T  3552993 ttttggtaattacacatttaagatcaattttgattcaaattatccaaacaatatgaaatgataagaattacttccacattaatgtatccatacataaaac 3552894  T
Q  389 aatt 392  Q
    ||||    
T  3552893 aatt 3552890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 45714814 - 45714767
Alignment:
Q  271 aaatacaattaaa-ggatattttggtcattatatattcaaaatcaatt 317  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  45714814 aaatacaattaaaaggataatttggtcattatatattcaaaatcaatt 45714767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 2212510 - 2212576
Alignment:
Q  37 agagagtctggagtcttcttcat-aaatgacttcaattacccatcattatatttgttatttattaat 102  Q
    ||||||||| ||||||||||||| |||||| ||||||||| ||||| ||||||| ||| ||||||||    
T  2212510 agagagtctagagtcttcttcataaaatgaattcaattacacatcagtatatttattacttattaat 2212576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 392
Target Start/End: Complemental strand, 3602587 - 3602503
Alignment:
Q  308 aaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaatt 392  Q
    |||||||||||| ||| |||  |||||||||  || || | ||||||||||||||||  ||||| ||||||||||||| ||||||    
T  3602587 aaaatcaattttaattcaaactatccaaacaacatgaattaataaaaatcacttttattttaatatatccaaacataattcaatt 3602503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 42516176 - 42516063
Alignment:
Q  240 aataattatataaaatga----gatatttaattttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatcca 334  Q
    ||||||||| ||||||||    |||||||| ||| ||||| |||||||  |||| |||||| |||||| |||||||||||||||| ||| |||  |||||    
T  42516176 aataattatctaaaatgaaaatgatatttagtttcaaatagaattaaaaagataatttggttattatacattcaaaatcaattttaattcaaactatcca 42516077  T
Q  335 aacattatcaactc 348  Q
    ||||  ||||||||    
T  42516076 aacaacatcaactc 42516063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 1945166 - 1945082
Alignment:
Q  309 aaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaa-tgtatccaaacataaatcaattc 393  Q
    ||||||||||||||| |||  |||||||||  |||||| || |  ||||||||||| || || |||||||||||||||||||||||    
T  1945166 aaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcactttta-ataaagtgtatccaaacataaatcaattc 1945082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 393
Target Start/End: Original strand, 27911386 - 27911471
Alignment:
Q  308 aaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||||||||| |||||||  ||||||| |  |||||||   || ||||||||||| || | | |||||||||||||||||||||    
T  27911386 aaaatcaattttaatttaaagtatccaaataacatcaacttgaaataatcacttttaaatgagtatatccaaacataaatcaattc 27911471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 393
Target Start/End: Original strand, 2213660 - 2213712
Alignment:
Q  341 atcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||||||||| ||||||||||| || | |||||||||| | ||||||||||    
T  2213660 atcaactcataagaatcacttttaaataagtgtatccaaagacaaatcaattc 2213712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 393
Target Start/End: Original strand, 31224693 - 31224745
Alignment:
Q  341 atcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||||||||| |||||||||||    ||| |||||||||||||||||||||    
T  31224693 atcaactcataagaatcacttttagtaaaatatatccaaacataaatcaattc 31224745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 40885168 - 40885281
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaa-tcacttttacattaatgtatccaa 379  Q
    |||||||| |||| |||||| |||||||||||||||||||||| |||  ||||||||| |||||||||||||||| ||||||||| |  | ||| |||||    
T  40885168 aaaggataatttgatcattacatattcaaaatcaattttgattcaaactatccaaacaatatcaactcataaaaactcacttttaaacaagtgtgtccaa 40885267  T
Q  380 acataaatcaattc 393  Q
    ||||||||||||||    
T  40885268 acataaatcaattc 40885281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 393
Target Start/End: Original strand, 3667820 - 3667924
Alignment:
Q  289 ttttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatc 388  Q
    ||||||||||| || ||| |||||||||||||||| |||  ||||||||| |||||||| ||||||||||||||||  | | ||||||||||||||||||    
T  3667820 ttttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatc 3667919  T
Q  389 aattc 393  Q
    |||||    
T  3667920 aattc 3667924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 39988088 - 39988009
Alignment:
Q  314 aattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||||||| || | |||||||||||||||||||||||    
T  39988088 aattttgatttaaatcatccaaacaacatcaactcataagaatcacttttaaataagtgtatccaaacataaatcaattc 39988009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 392
Target Start/End: Complemental strand, 8049178 - 8049094
Alignment:
Q  308 aaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaatt 392  Q
    |||| ||||||||||||||||||||||||||  | |||||||||| ||||||||||| || | ||||||||||||||||||||||    
T  8049178 aaaagcaattttgatttaaatcatccaaacaacaacaactcataagaatcacttttaaataagtgtatccaaacataaatcaatt 8049094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 392
Target Start/End: Complemental strand, 9275651 - 9275527
Alignment:
Q  269 ttaaatacaattaaag-gatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    |||||||||||||||  |||| ||||||||||| | |||||||||||| ||| ||| ||||||||||||||  |||||||||||| ||||| |||||       
T  9275651 ttaaatacaattaaaaagataatttggtcattacacattcaaaatcaagtttcattcaaatcatccaaacaacatcaactcataagaatcaattttatta 9275552  T
Q  368 taatgtatccaaacataaatcaatt 392  Q
     | ||||||||||||||||||||||    
T  9275551 aagtgtatccaaacataaatcaatt 9275527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 393
Target Start/End: Original strand, 22482132 - 22482259
Alignment:
Q  267 ttttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    ||||||||||||||||| ||||| ||| ||||||||| |||||||||||||||||||| |||  |||||||||  |||||| || |  |||||||||||     
T  22482132 ttttaaatacaattaaaaggatagtttagtcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcactttta- 22482230  T
Q  366 attaa-tgtatccaaacataaatcaattc 393  Q
    || || |||||||||||||||||||||||    
T  22482231 ataaagtgtatccaaacataaatcaattc 22482259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 393
Target Start/End: Original strand, 35760155 - 35760259
Alignment:
Q  289 ttttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatc 388  Q
    ||||||||||| || ||| |||||||||||||||| |||  ||||||||| |||||||| |||||||||| |||||  | | ||||||||||||||||||    
T  35760155 ttttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcagttttaattgagtgtatccaaacataaatc 35760254  T
Q  389 aattc 393  Q
    |||||    
T  35760255 aattc 35760259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 32454480 - 32454599
Alignment:
Q  267 ttttaaatacaatta-aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttac 365  Q
    |||||| |||||||| ||||||| |||||||||| || ||||||||| |||||||||| |||  |||||||||  |||||||||||| |||||||||||     
T  32454480 ttttaattacaattacaaggataatttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaa 32454579  T
Q  366 attaatgtatccaaacataa 385  Q
    |  | |||||||||||||||    
T  32454580 acaagtgtatccaaacataa 32454599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 40495511 - 40495401
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| |||| ||||| || |||| |||||||||||||||||||  || ||||||  |||||||||||||||||||||||| |  | ||||||||||    
T  40495511 aaaggataatttgatcattgtacattccaaatcaattttgatttaaactattcaaacaa-atcaactcataaaaatcacttttaaaaaagtgtatccaaa 40495413  T
Q  381 cataaatcaatt 392  Q
    ||||||||||||    
T  40495412 cataaatcaatt 40495401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 393
Target Start/End: Complemental strand, 41740738 - 41740635
Alignment:
Q  290 tttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatca 389  Q
    |||||||||| || ||||||||||||||||||||||||  |||||||||  |||||||||||| ||||||||||| |  | ||||| |||||||||| ||    
T  41740738 tttggtcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaatcacttttaaacaagtgtattcaaacataaacca 41740639  T
Q  390 attc 393  Q
    ||||    
T  41740638 attc 41740635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 393
Target Start/End: Original strand, 41834828 - 41834962
Alignment:
Q  260 tatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatca 358  Q
    |||||| ||||||||||||||||| ||||| ||||||||||  | |||||||||||||||| ||| |||  |||||||||  ||||| || ||| |||||    
T  41834828 tatttacttttaaatacaattaaaaggataatttggtcattgcacattcaaaatcaattttcattcaaactatccaaacaacatcaattcgtaagaatca 41834927  T
Q  359 cttttacattaatgtatccaaacataaatcaattc 393  Q
    ||| ||    | |||||||||||||||||||||||    
T  41834928 cttctagtaaagtgtatccaaacataaatcaattc 41834962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 7386059 - 7385974
Alignment:
Q  308 aaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    |||| |||||||||||||||| |||||||||  |||||||||||| ||||||||||| || | |||||  ||||||||||||||||    
T  7386059 aaaagcaattttgatttaaattatccaaacaacatcaactcataagaatcacttttaaataagtgtatttaaacataaatcaattc 7385974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 385
Target Start/End: Complemental strand, 13253249 - 13253132
Alignment:
Q  269 ttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    ||||||| ||||||| || || ||||||||||  || ||||||||||||||||||| |||  || ||||||  |||||||||||| ||||||||||| ||    
T  13253249 ttaaatataattaaaagggtaatttggtcatttaatgttcaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttttaaat 13253150  T
Q  368 taatgtatccaaacataa 385  Q
     | |||||||||||||||    
T  13253149 gagtgtatccaaacataa 13253132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 393
Target Start/End: Original strand, 24045760 - 24045900
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||||||||| ||||||||  ||||||| ||||| ||| |||||| ||  ||||||||||||||| ||| |||| |||||||||  |||||| ||||    
T  24045760 aatgagatatttagttttaaatctaattaaaaggataatttagtcattgtacgttcaaaatcaattttaattcaaattatccaaacaacatcaacccata 24045859  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||| |||||  | |  | ||||||||||||||||||||    
T  24045860 aaaatca-ttttaagtgagagcatccaaacataaatcaattc 24045900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 257 - 391
Target Start/End: Complemental strand, 28869681 - 28869547
Alignment:
Q  257 agatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaa 355  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||| | | || ||||| ||||| | | |||  |||||||||  |||||||||||| ||    
T  28869681 agatatttagttttaaatacaattaaaaggataatttggtcattacacactcgaaatctatttt-actcaaactatccaaacaacatcaactcataagaa 28869583  T
Q  356 tcacttttacattaatgtatccaaacataaatcaat 391  Q
    |||||||||  | | ||||| |||||||||||||||    
T  28869582 tcacttttaagtaagtgtattcaaacataaatcaat 28869547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 393
Target Start/End: Original strand, 4292102 - 4292219
Alignment:
Q  276 caattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaa-tgta 374  Q
    |||||||| ||||| |  ||||||| | ||||||||| |||||||||| |||| ||||||||| |||||||  | || |||||||| || ||||| ||||    
T  4292102 caattaaaagatatatcagtcattacacattcaaaattaattttgattcaaattatccaaacaatatcaaccaacaagaatcacttcta-attaagtgta 4292200  T
Q  375 tccaaacataaatcaattc 393  Q
    |||||||||||||||||||    
T  4292201 tccaaacataaatcaattc 4292219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 16158619 - 16158507
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||| |||||||| |||||| | |||||||||||||||||||| |||||||||||| |  ||||| || ||| ||||||||||| |  | || |||||||    
T  16158619 aaagaatattttgatcattacacattcaaaatcaattttgattcaaatcatccaaagaacatcaattcctaagaatcacttttaaaaaagtgcatccaaa 16158520  T
Q  381 cataaatcaattc 393  Q
     |||||| |||||    
T  16158519 tataaattaattc 16158507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 7714868 - 7714975
Alignment:
Q  251 aaaatgagatatttaattttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcat 350  Q
    ||||||||||||||| ||||||  ||| | |||||||| ||| |||||||||  ||||||||||||||| ||| |||  |||||||||  ||||||| ||    
T  7714868 aaaatgagatatttatttttaataacattaaaaggataatttagtcattatactttcaaaatcaattttaattcaaactatccaaacaacatcaacttat 7714967  T
Q  351 aaaaatca 358  Q
    || |||||    
T  7714968 aagaatca 7714975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 385
Target Start/End: Complemental strand, 40791212 - 40791119
Alignment:
Q  292 tggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaa-tgtatccaaacataa 385  Q
    ||||||||||| ||||| |||||||||||||| ||   ||||||||| |||||||||| || ||||||||||| |||||  ||||||||||||||    
T  40791212 tggtcattatacattcacaatcaattttgattcaatgtatccaaacaatatcaactcaaaagaatcactttta-attaagcgtatccaaacataa 40791119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 385
Target Start/End: Original strand, 42146277 - 42146370
Alignment:
Q  292 tggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaa-tgtatccaaacataa 385  Q
    ||||||||||| ||||| |||||||||||||| ||   ||||||||| |||||||||| || ||||||||||| |||||  ||||||||||||||    
T  42146277 tggtcattatacattcacaatcaattttgattcaatgtatccaaacaatatcaactcaaaagaatcactttta-attaagcgtatccaaacataa 42146370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 392
Target Start/End: Original strand, 7178722 - 7178847
Alignment:
Q  267 ttttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttaca 366  Q
    |||||||||||||||||    |||||||| ||||||  ||||||| ||||||||||| |||  | |||||||  || || | |||| ||||| |||||      
T  7178722 ttttaaatacaattaaaacccattttggtaattatactttcaaaagcaattttgattcaaactacccaaacaacataaattgataagaatcaattttagg 7178821  T
Q  367 ttaatgtatccaaacataaatcaatt 392  Q
    ||| ||||||||||||||||||||||    
T  7178822 ttattgtatccaaacataaatcaatt 7178847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 361
Target Start/End: Complemental strand, 2430449 - 2430370
Alignment:
Q  282 aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactt 361  Q
    ||||||| ||| ||||||| | | |||||||||||||||||| |||  |||||||||  |||||||||||| ||||||||    
T  2430449 aaggataatttagtcattacacactcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcactt 2430370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 393
Target Start/End: Original strand, 32030645 - 32030784
Alignment:
Q  253 aatgagatatttaattttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcata 351  Q
    ||||||| ||||| |||||||||||| |||| ||||| ||| ||||||| |  ||||||||||||||||||| |||  || ||||||  |||||  ||||    
T  32030645 aatgagacatttacttttaaatacaactaaaaggatagtttagtcattacaccttcaaaatcaattttgattcaaactattcaaacaacatcaa--cata 32030742  T
Q  352 aaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    | ||||||||||  || | | |||| ||||| ||||||||||    
T  32030743 agaatcacttttgaataagtatatcaaaacaaaaatcaattc 32030784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 362
Target Start/End: Complemental strand, 3060376 - 3060296
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttt 362  Q
    |||||||| |||||||| || | |||||||||||||||||||| |||  |||||||||  || ||||||||| |||||||||    
T  3060376 aaaggataatttggtcaatacacattcaaaatcaattttgattcaaactatccaaacaacat-aactcataagaatcacttt 3060296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 27021086 - 27021198
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaa-atcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaa 379  Q
    |||||||| ||| ||||||||| |||||||||||||||||||| ||  | |||||||||  |||||||  ||| |||||||||||  | | | || ||||    
T  27021086 aaaggataatttcgtcattatacattcaaaatcaattttgattcaatcttatccaaacaacatcaacttctaagaatcacttttaagtgagtata-ccaa 27021184  T
Q  380 acataaatcaattc 393  Q
    ||||||||||||||    
T  27021185 acataaatcaattc 27021198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 5710511 - 5710428
Alignment:
Q  309 aaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||||||| ||| |||  ||||||||| |||| ||||||||||||||||| || || |  ||||||||||||||| ||||||    
T  5710511 aaatcaatttttattcaaactatccaaacaatatctactcataaaaatcacttgta-ataagcgtatccaaacataaagcaattc 5710428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 364
Target Start/End: Complemental strand, 2694906 - 2694831
Alignment:
Q  289 ttttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactttta 364  Q
    ||||||| |||| | | |||||||||||||||||| |||| || ||||||| ||||| | |||| |||||||||||    
T  2694906 ttttggtaattacacactcaaaatcaattttgattcaaattatacaaacatcatcaattgataagaatcactttta 2694831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 10058056 - 10058144
Alignment:
Q  305 ttcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatcaattc 393  Q
    ||||||||||||||| ||| |||  |||||||||  ||||| || ||| |||||||| ||    | |||||||||||||||||||||||    
T  10058056 ttcaaaatcaattttcattcaaactatccaaacaacatcaattcgtaagaatcacttctagtaaagtgtatccaaacataaatcaattc 10058144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 253072 - 253184
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||   |||||||||  || ||||||||| |||||||||||  | || |||||||||    
T  253072 aaaggataagttggtcattatatattcaaaatcaattttgattcaatctatccaaacaacattaactcataagaatcacttttaactgaaggtatccaaa 253171  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  253172 cataaatcaattc 253184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 393
Target Start/End: Complemental strand, 2197 - 2072
Alignment:
Q  269 ttaaatacaattaaa-ggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacat 367  Q
    |||||| |||||||| ||||| || |||| |||||||||||||||||||||||| |||||  |||||||||  |||||  ||| | ||||||||||| ||    
T  2197 ttaaatccaattaaaaggataattcggtctttatatattcaaaatcaattttgacttaaactatccaaacaacatcaagccatgataatcacttttatat 2098  T
Q  368 taatgtatccaaacataaatcaattc 393  Q
     | || ||||||||||||||||||||    
T  2097 gagtgcatccaaacataaatcaattc 2072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 46714 - 46818
Alignment:
Q  288 attttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaat 387  Q
    |||||||| |||||| || |||||||||||||||||| ||  |||||||||  || || | ||||||||||||||||| ||||| ||||||||||||||     
T  46714 attttggtaattatacatccaaaatcaattttgatttgaactatccaaacaacatgaattgataaaaatcacttttactttaatatatccaaacataaac 46813  T
Q  388 caatt 392  Q
    |||||    
T  46814 caatt 46818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 384
Target Start/End: Original strand, 9025 - 9158
Alignment:
Q  251 aaaatgagatatttaattttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcat 350  Q
    |||||||||||||||  |||||  ||| | |||||||| ||| ||||||||| |||||||||||||||| ||| |||  |||||||||  ||| ||||||    
T  9025 aaaatgagatatttatatttaataacattaaaaggataatttagtcattatacattcaaaatcaattttaattcaaactatccaaacaacatctactcat 9124  T
Q  351 aaaaatcacttttacattaatgtatccaaacata 384  Q
    || ||||||||| |  | | ||||||||||||||    
T  9125 aagaatcactttcaagtgagtgtatccaaacata 9158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 392
Target Start/End: Complemental strand, 138657 - 138554
Alignment:
Q  289 ttttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaacataaatc 388  Q
    ||||||| |||| | ||| ||||||||||||||||||||| ||| |||| ||||  | | |||| |||||||||||  |||| |||||||||||||||||    
T  138657 ttttggtaattacacatttaaaatcaattttgatttaaattatctaaactttatggattgataagaatcacttttatgttaaggtatccaaacataaatc 138558  T
Q  389 aatt 392  Q
    ||||    
T  138557 aatt 138554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 328
Target Start/End: Complemental strand, 6002 - 5941
Alignment:
Q  267 ttttaaatacaattaaaggatattttggtcattatatattcaaaatcaattttgatttaaat 328  Q
    |||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||| ||||    
T  6002 ttttaaatacaattaaaggatagtttagtcattacacattcaaaatcaattttgattcaaat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 2425 - 2313
Alignment:
Q  281 aaaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcacttttacattaatgtatccaaa 380  Q
    |||||||| ||||||||||| |||| ||||||||||||||||| |||  ||| |||||   ||||||  |||||| |||||||| |  | ||| ||||||    
T  2425 aaaggataatttggtcattacatatccaaaatcaattttgattcaaactatctaaacaacgtcaacttgtaaaaaccacttttaaacaagtgtgtccaaa 2326  T
Q  381 cataaatcaattc 393  Q
    |||||||||||||    
T  2325 cataaatcaattc 2313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 361
Target Start/End: Complemental strand, 29278 - 29199
Alignment:
Q  282 aaggatattttggtcattatatattcaaaatcaattttgatttaaatcatccaaacattatcaactcataaaaatcactt 361  Q
    ||||||| ||| ||||||| | |||||||||||||||||||| |||  |||||||||  ||||| |||||| ||| ||||    
T  29278 aaggataatttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaattcataagaataactt 29199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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