View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3028_low_13 (Length: 379)

Name: NF3028_low_13
Description: NF3028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3028_low_13
NF3028_low_13
[»] chr3 (75 HSPs)
chr3 (138-324)||(19556539-19556721)
chr3 (1-73)||(19556786-19556858)
chr3 (251-338)||(18365261-18365348)
chr3 (252-338)||(1263039-1263125)
chr3 (255-338)||(3089763-3089846)
chr3 (251-338)||(4757004-4757091)
chr3 (251-338)||(10887719-10887806)
chr3 (251-338)||(11344700-11344787)
chr3 (248-314)||(41587315-41587381)
chr3 (248-313)||(14600383-14600448)
chr3 (262-338)||(48841535-48841611)
chr3 (251-338)||(4558041-4558128)
chr3 (251-338)||(13625885-13625972)
chr3 (251-338)||(14602090-14602177)
chr3 (251-338)||(37183087-37183174)
chr3 (255-338)||(49080589-49080672)
chr3 (251-316)||(1262406-1262471)
chr3 (251-311)||(10688797-10688857)
chr3 (254-338)||(11581848-11581932)
chr3 (252-355)||(19546990-19547096)
chr3 (251-334)||(291767-291850)
chr3 (251-314)||(11345363-11345426)
chr3 (259-338)||(16067875-16067954)
chr3 (251-314)||(18364639-18364702)
chr3 (251-338)||(23309600-23309687)
chr3 (251-314)||(27255294-27255357)
chr3 (251-338)||(27255954-27256041)
chr3 (251-338)||(30604684-30604771)
chr3 (251-338)||(32737151-32737238)
chr3 (251-334)||(40927502-40927585)
chr3 (251-338)||(41865665-41865751)
chr3 (251-338)||(47793992-47794079)
chr3 (256-338)||(27395055-27395137)
chr3 (254-338)||(49764502-49764586)
chr3 (253-321)||(45241212-45241280)
chr3 (295-338)||(1763696-1763739)
chr3 (251-314)||(3090422-3090485)
chr3 (271-338)||(5963086-5963153)
chr3 (251-338)||(22524127-22524214)
chr3 (259-314)||(40036400-40036455)
chr3 (255-338)||(40974049-40974132)
chr3 (251-338)||(41586654-41586741)
chr3 (251-334)||(44950970-44951053)
chr3 (251-313)||(22130402-22130464)
chr3 (259-313)||(27396710-27396764)
chr3 (251-313)||(41864986-41865048)
chr3 (251-324)||(20612103-20612176)
chr3 (256-313)||(54403573-54403630)
chr3 (262-314)||(53490735-53490787)
chr3 (295-357)||(1363435-1363500)
chr3 (263-338)||(2756587-2756662)
chr3 (287-338)||(10689442-10689493)
chr3 (275-353)||(19538328-19538409)
chr3 (254-313)||(20030583-20030642)
chr3 (251-314)||(23682000-23682063)
chr3 (251-314)||(24054237-24054300)
chr3 (251-310)||(49079968-49080027)
chr3 (1-72)||(50700508-50700574)
chr3 (251-313)||(4558744-4558806)
chr3 (251-313)||(10888409-10888471)
chr3 (251-313)||(11056565-11056627)
chr3 (251-313)||(23308945-23309007)
chr3 (251-281)||(24542319-24542349)
chr3 (257-354)||(32221618-32221718)
chr3 (259-313)||(44500048-44500102)
chr3 (256-313)||(13623189-13623246)
chr3 (294-335)||(54606407-54606448)
chr3 (1-69)||(6466379-6466442)
chr3 (203-235)||(18480080-18480112)
chr3 (207-235)||(19547121-19547149)
chr3 (294-338)||(22129739-22129783)
chr3 (294-338)||(27397497-27397541)
chr3 (294-338)||(40035789-40035833)
chr3 (1-41)||(44804774-44804814)
chr3 (251-335)||(48224120-48224204)
[»] chr8 (59 HSPs)
chr8 (251-338)||(11759397-11759484)
chr8 (255-357)||(8628010-8628115)
chr8 (251-335)||(3075315-3075399)
chr8 (251-338)||(6292523-6292610)
chr8 (251-338)||(22934298-22934385)
chr8 (251-338)||(39998379-39998466)
chr8 (252-338)||(40791736-40791822)
chr8 (251-338)||(10216116-10216203)
chr8 (251-338)||(17565319-17565406)
chr8 (251-338)||(34364564-34364646)
chr8 (251-338)||(37837558-37837645)
chr8 (253-338)||(14363786-14363871)
chr8 (251-315)||(11760071-11760135)
chr8 (262-357)||(40298939-40299037)
chr8 (256-355)||(43764092-43764194)
chr8 (254-338)||(44746820-44746904)
chr8 (251-338)||(8442665-8442752)
chr8 (251-334)||(11140103-11140186)
chr8 (251-314)||(11141066-11141129)
chr8 (251-338)||(24810237-24810323)
chr8 (257-338)||(24778003-24778084)
chr8 (256-338)||(34679906-34679987)
chr8 (262-336)||(44147614-44147688)
chr8 (257-338)||(32905308-32905389)
chr8 (294-334)||(13440121-13440161)
chr8 (251-311)||(14879529-14879589)
chr8 (258-338)||(17496907-17496986)
chr8 (251-338)||(26928197-26928284)
chr8 (255-314)||(5872742-5872801)
chr8 (251-334)||(14880173-14880256)
chr8 (251-321)||(17496270-17496338)
chr8 (259-338)||(29636367-29636446)
chr8 (254-311)||(4256571-4256628)
chr8 (255-311)||(6099484-6099540)
chr8 (251-311)||(6293205-6293265)
chr8 (1-32)||(29851144-29851175)
chr8 (251-314)||(36016764-36016827)
chr8 (257-311)||(17734919-17734973)
chr8 (251-313)||(25597782-25597844)
chr8 (251-357)||(25598417-25598525)
chr8 (260-314)||(37266147-37266201)
chr8 (261-339)||(37304872-37304950)
chr8 (259-313)||(43777001-43777055)
chr8 (251-313)||(44284356-44284418)
chr8 (254-311)||(3075144-3075201)
chr8 (295-336)||(6099391-6099432)
chr8 (1-70)||(11587804-11587868)
chr8 (257-334)||(32904204-32904281)
chr8 (294-338)||(8297783-8297827)
chr8 (294-338)||(8437949-8437993)
chr8 (294-338)||(13422047-13422091)
chr8 (262-338)||(25485407-25485483)
chr8 (258-330)||(31739525-31739597)
chr8 (294-338)||(31846499-31846543)
chr8 (294-338)||(34923893-34923937)
chr8 (1-69)||(35544038-35544101)
chr8 (262-338)||(37265513-37265589)
chr8 (257-313)||(37304242-37304298)
chr8 (257-313)||(40791061-40791117)
[»] chr2 (71 HSPs)
chr2 (251-338)||(33146683-33146770)
chr2 (251-338)||(3514809-3514896)
chr2 (251-338)||(15006437-15006523)
chr2 (251-313)||(3045604-3045666)
chr2 (254-359)||(17829060-17829168)
chr2 (253-338)||(20894261-20894346)
chr2 (262-338)||(37330355-37330431)
chr2 (261-338)||(40768850-40768927)
chr2 (254-338)||(34173055-34173139)
chr2 (251-314)||(6229889-6229952)
chr2 (251-338)||(11051565-11051652)
chr2 (255-338)||(11563807-11563890)
chr2 (251-338)||(35899144-35899231)
chr2 (251-337)||(22606322-22606408)
chr2 (251-311)||(5475141-5475201)
chr2 (254-338)||(7939974-7940058)
chr2 (262-338)||(14743108-14743184)
chr2 (251-338)||(34248043-34248130)
chr2 (254-338)||(37198938-37199017)
chr2 (259-338)||(552488-552567)
chr2 (251-338)||(11796146-11796233)
chr2 (255-338)||(43439139-43439222)
chr2 (251-321)||(28167546-28167616)
chr2 (256-313)||(7939338-7939395)
chr2 (254-314)||(41521707-41521767)
chr2 (254-338)||(3044937-3045021)
chr2 (271-338)||(10357101-10357168)
chr2 (251-338)||(13873322-13873409)
chr2 (251-338)||(14013447-14013534)
chr2 (255-338)||(31363904-31363987)
chr2 (251-314)||(33146041-33146104)
chr2 (251-314)||(37009664-37009727)
chr2 (251-314)||(37199604-37199667)
chr2 (251-338)||(38972470-38972557)
chr2 (264-314)||(11470497-11470547)
chr2 (252-313)||(16110488-16110549)
chr2 (264-313)||(32875176-32875225)
chr2 (254-315)||(34830762-34830823)
chr2 (254-338)||(37009004-37009088)
chr2 (252-321)||(40769367-40769436)
chr2 (251-324)||(42791459-42791532)
chr2 (294-338)||(5474673-5474717)
chr2 (251-311)||(11796817-11796877)
chr2 (251-311)||(31709745-31709805)
chr2 (251-311)||(34173721-34173781)
chr2 (294-338)||(41078139-41078183)
chr2 (11-46)||(27332022-27332057)
chr2 (251-314)||(31597231-31597294)
chr2 (251-306)||(39160294-39160349)
chr2 (251-306)||(39208845-39208900)
chr2 (251-314)||(40947438-40947501)
chr2 (251-314)||(44332387-44332450)
chr2 (2-44)||(4979130-4979172)
chr2 (2-44)||(4997039-4997081)
chr2 (251-313)||(20893210-20893272)
chr2 (251-313)||(33886403-33886465)
chr2 (259-313)||(35657453-35657507)
chr2 (251-313)||(38973150-38973212)
chr2 (256-338)||(43656919-43657001)
chr2 (252-313)||(16111172-16111233)
chr2 (251-320)||(26196213-26196282)
chr2 (257-314)||(41077506-41077563)
chr2 (254-314)||(3515477-3515537)
chr2 (262-314)||(4437983-4438035)
chr2 (254-338)||(11563628-11563712)
chr2 (255-307)||(12414301-12414353)
chr2 (255-307)||(12426361-12426413)
chr2 (271-315)||(22298254-22298298)
chr2 (1-45)||(32864162-32864206)
chr2 (255-311)||(35658880-35658936)
chr2 (294-338)||(41521648-41521692)
[»] chr1 (56 HSPs)
chr1 (255-338)||(50144032-50144115)
chr1 (251-338)||(41321519-41321606)
chr1 (251-334)||(41575180-41575263)
chr1 (251-338)||(19997610-19997697)
chr1 (251-313)||(36604733-36604795)
chr1 (251-338)||(1845866-1845953)
chr1 (251-338)||(18407182-18407269)
chr1 (251-338)||(23739797-23739884)
chr1 (250-321)||(47292238-47292309)
chr1 (251-313)||(4601709-4601771)
chr1 (251-313)||(45738006-45738068)
chr1 (254-338)||(51362467-51362551)
chr1 (251-314)||(16536378-16536441)
chr1 (251-338)||(52505300-52505387)
chr1 (259-337)||(16537002-16537080)
chr1 (272-338)||(29510459-29510525)
chr1 (251-321)||(45737311-45737381)
chr1 (256-338)||(51611811-51611893)
chr1 (262-322)||(831930-831990)
chr1 (251-354)||(28971423-28971529)
chr1 (262-338)||(45195219-45195295)
chr1 (266-338)||(47233695-47233767)
chr1 (259-338)||(8061040-8061119)
chr1 (254-313)||(13574168-13574227)
chr1 (251-314)||(17109312-17109374)
chr1 (255-338)||(36605381-36605464)
chr1 (262-321)||(37418844-37418903)
chr1 (251-338)||(38011834-38011921)
chr1 (251-314)||(42831206-42831269)
chr1 (295-334)||(44645919-44645958)
chr1 (254-313)||(45738676-45738735)
chr1 (252-338)||(794728-794814)
chr1 (261-338)||(4666890-4666968)
chr1 (251-313)||(25068331-25068393)
chr1 (252-313)||(27225683-27225744)
chr1 (1-70)||(31023635-31023699)
chr1 (271-311)||(831838-831878)
chr1 (258-338)||(17109998-17110077)
chr1 (254-314)||(19071721-19071781)
chr1 (254-314)||(19119611-19119671)
chr1 (255-311)||(47233070-47233126)
chr1 (295-338)||(31765983-31766026)
chr1 (255-338)||(42830548-42830631)
chr1 (254-313)||(52505980-52506039)
chr1 (254-312)||(1846546-1846604)
chr1 (256-334)||(19072343-19072421)
chr1 (256-334)||(19120233-19120311)
chr1 (255-313)||(25813032-25813090)
chr1 (251-309)||(27930771-27930829)
chr1 (255-313)||(41322201-41322259)
chr1 (256-334)||(45559114-45559192)
chr1 (271-316)||(831293-831338)
chr1 (1-46)||(3280906-3280951)
chr1 (251-311)||(27521945-27522005)
chr1 (259-338)||(27532557-27532637)
chr1 (1-69)||(32145526-32145589)
[»] chr5 (61 HSPs)
chr5 (251-358)||(18524321-18524431)
chr5 (251-338)||(1199725-1199812)
chr5 (251-338)||(31476945-31477032)
chr5 (251-334)||(13686606-13686689)
chr5 (255-338)||(19408550-19408633)
chr5 (257-338)||(21639031-21639112)
chr5 (251-337)||(32020471-32020559)
chr5 (251-338)||(4877355-4877442)
chr5 (251-338)||(35751523-35751610)
chr5 (251-313)||(20540987-20541049)
chr5 (252-338)||(37658055-37658141)
chr5 (251-338)||(17967826-17967913)
chr5 (251-358)||(27979857-27979967)
chr5 (255-338)||(20570808-20570891)
chr5 (251-338)||(24625475-24625562)
chr5 (251-321)||(4876717-4876787)
chr5 (256-334)||(8007073-8007151)
chr5 (250-324)||(17781143-17781216)
chr5 (261-314)||(8573353-8573406)
chr5 (251-316)||(13685975-13686040)
chr5 (256-321)||(15145076-15145141)
chr5 (251-338)||(6047992-6048079)
chr5 (263-338)||(9017666-9017741)
chr5 (251-338)||(37334568-37334655)
chr5 (251-334)||(40027484-40027567)
chr5 (251-313)||(4055414-4055476)
chr5 (255-313)||(14594080-14594138)
chr5 (251-313)||(20691121-20691183)
chr5 (251-313)||(36737454-36737516)
chr5 (251-313)||(36762121-36762183)
chr5 (251-313)||(37333910-37333972)
chr5 (251-313)||(37657388-37657450)
chr5 (255-321)||(40026939-40027005)
chr5 (256-338)||(40957395-40957477)
chr5 (1-70)||(33700-33764)
chr5 (261-338)||(20183377-20183454)
chr5 (252-313)||(36742129-36742190)
chr5 (294-339)||(36742561-36742606)
chr5 (255-311)||(27979242-27979298)
chr5 (251-311)||(31850667-31850727)
chr5 (262-338)||(32458493-32458569)
chr5 (264-311)||(12548436-12548483)
chr5 (1-48)||(15268319-15268366)
chr5 (251-338)||(20540307-20540394)
chr5 (251-314)||(22731064-22731127)
chr5 (254-313)||(24624827-24624886)
chr5 (271-313)||(8007191-8007233)
chr5 (251-313)||(9119553-9119615)
chr5 (255-313)||(17781051-17781108)
chr5 (164-194)||(25538083-25538113)
chr5 (254-311)||(6029464-6029521)
chr5 (251-324)||(20570135-20570208)
chr5 (1-70)||(40275226-40275290)
chr5 (251-338)||(6031329-6031416)
chr5 (1-69)||(8883369-8883432)
chr5 (255-311)||(14594750-14594806)
chr5 (262-338)||(15175223-15175299)
chr5 (1-64)||(24806929-24806990)
chr5 (294-338)||(30782763-30782807)
chr5 (271-311)||(38497355-38497395)
chr5 (255-338)||(38498007-38498093)
[»] scaffold0289 (2 HSPs)
scaffold0289 (251-338)||(3415-3502)
scaffold0289 (254-313)||(4053-4112)
[»] chr6 (56 HSPs)
chr6 (251-338)||(25527736-25527823)
chr6 (251-338)||(12026178-12026265)
chr6 (251-338)||(12693852-12693939)
chr6 (255-338)||(30462097-30462180)
chr6 (251-338)||(33950232-33950319)
chr6 (250-338)||(5443016-5443104)
chr6 (251-334)||(11522806-11522889)
chr6 (251-338)||(12033098-12033185)
chr6 (251-338)||(14313830-14313917)
chr6 (251-338)||(14873024-14873111)
chr6 (256-338)||(10702282-10702364)
chr6 (251-313)||(14306798-14306860)
chr6 (251-313)||(14313198-14313260)
chr6 (251-338)||(7127638-7127725)
chr6 (251-314)||(17307212-17307275)
chr6 (251-338)||(25577182-25577269)
chr6 (251-313)||(5443696-5443758)
chr6 (272-338)||(6936402-6936468)
chr6 (251-313)||(12025523-12025585)
chr6 (1-70)||(6087048-6087112)
chr6 (294-354)||(17312060-17312123)
chr6 (250-338)||(9240864-9240952)
chr6 (254-338)||(31881850-31881934)
chr6 (294-338)||(32003844-32003888)
chr6 (255-311)||(32521846-32521902)
chr6 (251-338)||(188414-188501)
chr6 (255-334)||(3767731-3767810)
chr6 (254-325)||(4125886-4125957)
chr6 (251-314)||(7448895-7448958)
chr6 (259-338)||(21801953-21802032)
chr6 (250-313)||(22342103-22342166)
chr6 (256-335)||(24619919-24619998)
chr6 (255-313)||(187780-187838)
chr6 (251-313)||(9241545-9241607)
chr6 (251-313)||(11523483-11523545)
chr6 (255-313)||(34250714-34250772)
chr6 (251-313)||(34709923-34709985)
chr6 (255-324)||(12766957-12767026)
chr6 (261-338)||(16326051-16326128)
chr6 (261-338)||(16349449-16349526)
chr6 (259-311)||(7448243-7448295)
chr6 (254-338)||(34250072-34250155)
chr6 (251-314)||(2522675-2522738)
chr6 (254-325)||(4100524-4100595)
chr6 (255-314)||(21802609-21802668)
chr6 (251-314)||(22022279-22022342)
chr6 (251-357)||(28023567-28023677)
chr6 (259-313)||(10702940-10702994)
chr6 (251-313)||(14873703-14873765)
chr6 (264-338)||(34794503-34794577)
chr6 (1-70)||(30510800-30510864)
chr6 (271-311)||(6936504-6936544)
chr6 (253-313)||(12767047-12767107)
chr6 (253-313)||(25528423-25528483)
chr6 (294-334)||(32113788-32113828)
chr6 (294-338)||(34280662-34280706)
[»] chr4 (84 HSPs)
chr4 (251-338)||(6233084-6233171)
chr4 (251-338)||(47030463-47030550)
chr4 (252-338)||(46095414-46095500)
chr4 (260-338)||(50824644-50824722)
chr4 (251-338)||(616112-616199)
chr4 (251-314)||(721984-722047)
chr4 (251-338)||(8192971-8193058)
chr4 (251-338)||(35667264-35667351)
chr4 (251-338)||(35667547-35667634)
chr4 (260-338)||(37708791-37708869)
chr4 (250-314)||(754874-754938)
chr4 (250-338)||(13395195-13395283)
chr4 (251-358)||(13771725-13771835)
chr4 (251-338)||(17722757-17722844)
chr4 (256-338)||(9784599-9784680)
chr4 (253-338)||(28464210-28464295)
chr4 (254-314)||(13482193-13482253)
chr4 (254-338)||(19313994-19314078)
chr4 (258-338)||(35667737-35667817)
chr4 (251-334)||(796390-796473)
chr4 (251-338)||(4950576-4950663)
chr4 (251-338)||(7166059-7166146)
chr4 (251-338)||(16960212-16960299)
chr4 (251-314)||(19313352-19313415)
chr4 (259-338)||(23308813-23308892)
chr4 (251-338)||(26705650-26705737)
chr4 (251-314)||(41919913-41919976)
chr4 (251-313)||(7797619-7797681)
chr4 (252-338)||(33047210-33047296)
chr4 (253-314)||(25010062-25010123)
chr4 (251-312)||(26705041-26705102)
chr4 (254-338)||(721332-721416)
chr4 (254-314)||(18362702-18362762)
chr4 (262-338)||(30192527-30192603)
chr4 (254-338)||(33032170-33032254)
chr4 (254-314)||(36600164-36600224)
chr4 (251-338)||(8138973-8139060)
chr4 (251-338)||(10155510-10155597)
chr4 (254-313)||(23722057-23722116)
chr4 (251-314)||(36898104-36898167)
chr4 (259-338)||(37423795-37423874)
chr4 (251-314)||(55068850-55068913)
chr4 (251-313)||(7165403-7165465)
chr4 (251-313)||(13392757-13392819)
chr4 (251-313)||(13395896-13395958)
chr4 (251-313)||(17730186-17730248)
chr4 (251-313)||(21037854-21037916)
chr4 (255-313)||(32448946-32449004)
chr4 (251-321)||(44664713-44664783)
chr4 (251-313)||(47029824-47029886)
chr4 (256-338)||(49702388-49702470)
chr4 (260-338)||(56310048-56310125)
chr4 (1-70)||(23153827-23153891)
chr4 (254-338)||(755507-755591)
chr4 (251-311)||(20545026-20545086)
chr4 (251-334)||(36897467-36897548)
chr4 (262-314)||(37424451-37424503)
chr4 (254-313)||(23265790-23265849)
chr4 (251-314)||(23269175-23269238)
chr4 (251-338)||(32448282-32448368)
chr4 (251-314)||(37709571-37709634)
chr4 (255-334)||(44665170-44665249)
chr4 (255-314)||(48372426-48372485)
chr4 (251-338)||(49621328-49621414)
chr4 (254-313)||(51019661-51019720)
chr4 (255-313)||(615445-615503)
chr4 (251-309)||(6232357-6232415)
chr4 (251-313)||(12250681-12250743)
chr4 (296-338)||(25008272-25008314)
chr4 (251-313)||(29429705-29429767)
chr4 (251-313)||(35667387-35667449)
chr4 (252-314)||(45847772-45847834)
chr4 (1-70)||(3086100-3086164)
chr4 (253-314)||(16960879-16960940)
chr4 (1-70)||(26855491-26855555)
chr4 (259-316)||(29979071-29979128)
chr4 (251-312)||(35853565-35853626)
chr4 (1-70)||(54315225-54315289)
chr4 (262-338)||(7796964-7797040)
chr4 (1-69)||(21634741-21634804)
chr4 (249-313)||(33046565-33046629)
chr4 (253-313)||(35665961-35666021)
chr4 (1-69)||(41858886-41858949)
chr4 (294-338)||(45847185-45847229)
[»] scaffold0102 (1 HSPs)
scaffold0102 (251-338)||(26983-27070)
[»] scaffold0105 (1 HSPs)
scaffold0105 (251-338)||(19627-19714)
[»] chr7 (67 HSPs)
chr7 (251-338)||(317285-317372)
chr7 (251-338)||(5228619-5228706)
chr7 (251-334)||(22263770-22263853)
chr7 (254-338)||(25266-25350)
chr7 (251-334)||(3340780-3340863)
chr7 (251-335)||(27144188-27144272)
chr7 (254-338)||(34999195-34999279)
chr7 (255-335)||(40343769-40343849)
chr7 (251-338)||(8122634-8122721)
chr7 (260-335)||(32867886-32867961)
chr7 (251-338)||(36847839-36847926)
chr7 (252-334)||(29823338-29823420)
chr7 (251-316)||(11639903-11639968)
chr7 (254-338)||(40400912-40400996)
chr7 (251-338)||(2146043-2146130)
chr7 (251-338)||(6184659-6184745)
chr7 (259-338)||(14078371-14078450)
chr7 (259-338)||(14388399-14388478)
chr7 (251-314)||(32867251-32867314)
chr7 (259-338)||(42813559-42813638)
chr7 (251-338)||(48982519-48982606)
chr7 (251-313)||(2146880-2146942)
chr7 (250-358)||(2935718-2935829)
chr7 (248-314)||(27619638-27619704)
chr7 (252-314)||(38790080-38790142)
chr7 (255-338)||(19156056-19156139)
chr7 (255-338)||(20755455-20755538)
chr7 (251-338)||(23742639-23742726)
chr7 (251-338)||(31220805-31220892)
chr7 (251-338)||(38670664-38670751)
chr7 (251-313)||(317963-318025)
chr7 (251-313)||(6185338-6185400)
chr7 (251-313)||(6191854-6191916)
chr7 (251-313)||(25606931-25606993)
chr7 (251-313)||(36848503-36848565)
chr7 (1-70)||(553945-554009)
chr7 (257-314)||(20261586-20261643)
chr7 (254-311)||(29615526-29615583)
chr7 (251-312)||(42813029-42813090)
chr7 (290-338)||(19332419-19332467)
chr7 (251-311)||(29736138-29736198)
chr7 (262-334)||(36890067-36890139)
chr7 (1-69)||(45823005-45823068)
chr7 (259-314)||(3341445-3341500)
chr7 (251-338)||(8535414-8535501)
chr7 (255-314)||(14753881-14753940)
chr7 (251-338)||(16425344-16425431)
chr7 (254-337)||(20261014-20261097)
chr7 (259-314)||(22711649-22711704)
chr7 (260-315)||(24679891-24679946)
chr7 (259-338)||(25607592-25607671)
chr7 (1-48)||(27131363-27131410)
chr7 (255-338)||(32388128-32388211)
chr7 (255-314)||(40401556-40401615)
chr7 (251-314)||(46011124-46011187)
chr7 (251-313)||(10412561-10412623)
chr7 (254-336)||(19435278-19435360)
chr7 (251-313)||(38670002-38670064)
chr7 (253-338)||(11640960-11641045)
chr7 (262-338)||(48872657-48872731)
chr7 (1-69)||(10439246-10439309)
chr7 (1-69)||(10452956-10453019)
chr7 (294-334)||(23728424-23728464)
chr7 (253-313)||(23742562-23742622)
chr7 (254-314)||(38987762-38987822)
chr7 (257-309)||(40189074-40189126)
chr7 (251-314)||(46010457-46010521)
[»] scaffold2113 (1 HSPs)
scaffold2113 (251-338)||(733-820)
[»] scaffold0115 (1 HSPs)
scaffold0115 (254-313)||(33350-33409)
[»] scaffold0004 (2 HSPs)
scaffold0004 (251-338)||(351917-352004)
scaffold0004 (272-313)||(351296-351337)
[»] scaffold0051 (1 HSPs)
scaffold0051 (257-338)||(10981-11062)
[»] scaffold0003 (3 HSPs)
scaffold0003 (253-338)||(421910-421995)
scaffold0003 (251-338)||(14056-14143)
scaffold0003 (251-314)||(421154-421217)
[»] scaffold0340 (2 HSPs)
scaffold0340 (251-338)||(12840-12927)
scaffold0340 (251-313)||(12197-12259)
[»] scaffold0368 (2 HSPs)
scaffold0368 (251-314)||(11262-11325)
scaffold0368 (255-338)||(10604-10687)
[»] scaffold0460 (1 HSPs)
scaffold0460 (251-313)||(13463-13525)
[»] scaffold0037 (1 HSPs)
scaffold0037 (262-316)||(100021-100075)
[»] scaffold0010 (1 HSPs)
scaffold0010 (4-46)||(134041-134083)
[»] scaffold1192 (1 HSPs)
scaffold1192 (251-338)||(167-254)
[»] scaffold0971 (1 HSPs)
scaffold0971 (251-314)||(3107-3169)
[»] scaffold0361 (1 HSPs)
scaffold0361 (251-334)||(16492-16575)
[»] scaffold0189 (1 HSPs)
scaffold0189 (259-314)||(11304-11359)
[»] scaffold0068 (1 HSPs)
scaffold0068 (255-314)||(59271-59330)
[»] scaffold0098 (1 HSPs)
scaffold0098 (251-313)||(34320-34382)
[»] scaffold0187 (2 HSPs)
scaffold0187 (1-48)||(10336-10383)
scaffold0187 (1-48)||(20664-20711)
[»] scaffold0036 (1 HSPs)
scaffold0036 (259-315)||(25887-25942)


Alignment Details
Target: chr3 (Bit Score: 113; Significance: 4e-57; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 138 - 324
Target Start/End: Complemental strand, 19556721 - 19556539
Alignment:
Q  138 gatggtgtaataggaaaagcgacaatgtattgtaaaacgacatataatttagaacaannnnnnncttcacaaagcgacatataatttaagacggagagtg 237  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||       |||||||||||||||||||||| ||||||||||| |    
T  19556721 gatggtgtaataggaaaaacgacaatgtattgtaaaacgacatataatttggaacaatttttttcttcacaaagcgacatataattgaagacggagagag 19556622  T
Q  238 tgcattacacctcctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctc 324  Q
    | ||||||||    ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||    
T  19556621 tacattacac----tcccctcccctcaaagatacttgaattacattcctcttcccttttatgttaaaatatacactttcatcccctc 19556539  T

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Target: chr3; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19556858 - 19556786
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtccttcat 73  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19556858 ttaaaaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtccttcat 19556786  T

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Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 18365348 - 18365261
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  18365348 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 18365261  T

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Target: chr3; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 1263125 - 1263039
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||| ||||||||||| ||  || ||| |||||||||||||||||||| || ||||||| |||||||||||||    
T  1263125 tcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactttcctcccctcttattcaaaacata 1263039  T

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Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 3089763 - 3089846
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||||||||| |   || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  3089763 cctcccctcaaagatacttgaattacacttccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 3089846  T

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Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 4757004 - 4757091
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||||||||||||  |||||||||| ||| || ||| |||| |||||||||||||||| ||||||||| |||||||||||||    
T  4757004 ctcctctcccctcaaagatgtttgaattacactctcctcccctcttaagttaaaatatacactcccatcccctcttattcaaaacata 4757091  T

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Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 10887719 - 10887806
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  10887719 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 10887806  T

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Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 11344700 - 11344787
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| |||||||||||||||||||| ||  || ||| |||||| |||||||||||| ||| ||||||| |||||||||||||    
T  11344700 ctcccctcccgtcaaagatacttgaattacactcccctcccctcttatgctaaaatatacaccctcctcccctcttattcaaaacata 11344787  T

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Target: chr3; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 41587381 - 41587315
Alignment:
Q  248 ctcctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||| ||||||||||||||||||||| || ||| ||| |||||||||||||||||||||    
T  41587381 ctcctcccctcctctcaaagatacttgaattacactcctctcccctcttatgttaaaatatacactc 41587315  T

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Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 14600383 - 14600448
Alignment:
Q  248 ctcctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||||||||||| ||||||||||| ||  || ||||||||||||||||||||||||    
T  14600383 ctcctcccctcccctcaaagatgcttgaattacactcccctccccacttatgttaaaatatacact 14600448  T

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Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 48841535 - 48841611
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||| || |||  || ||||||||||| ||||||||||| ||||||| |||||||||||||    
T  48841535 tcaaagatacttgaattacactcctctctcctcttatgttaaattatacactctcctcccctcttattcaaaacata 48841611  T

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Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 4558041 - 4558128
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||| |||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  4558041 ctcccctccccttaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 4558128  T

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Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 13625972 - 13625885
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || ||  ||||||||||||||||| ||| | ||||||| |||||||||||||    
T  13625972 ctcccctcccctcaaagatgcttgaattacactcccctcccatcttatgttaaaatataccctcccctcccctcttattcaaaacata 13625885  T

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Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 14602177 - 14602090
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| |   || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  14602177 ctcccctcccctcaaagatgcttgaattacacttccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 14602090  T

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Target: chr3; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 37183087 - 37183174
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||  |||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  37183087 ctcccctcccctcaaagatgtttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 37183174  T

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Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 49080672 - 49080589
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||| ||||||||| ||||||||||||||  || ||| ||||||||||||||||||||| | ||||||| | |||||||||||    
T  49080672 cctcctctcaaagatgcttgaattacattcccctcccctcttatgttaaaatatacactcccctcccctcttgttcaaaacata 49080589  T

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Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 1262406 - 1262471
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctc 316  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||||||||||||||||||||||    
T  1262406 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactctc 1262471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 10688797 - 10688857
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||||||||||||| ||||| |||||||| ||| ||| ||||||||||||||||||    
T  10688797 ctcccctcccctcaaagatgcttgacttacattcctctcccctcttatgttaaaatataca 10688857  T

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Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 11581848 - 11581932
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||| ||| ||||||  ||||||||||||  ||| ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  11581848 ccctctccttaaagatgtttgaattacatttctctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 11581932  T

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Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 355
Target Start/End: Complemental strand, 19547096 - 19546990
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaaca---tagaaaacattt 348  Q
    |||||||||||||||||| ||||||||||| | |||| | | ||||||||||||||||||||| | | | ||  |||||||||||   ||||||| ||||    
T  19547096 tcccctcccctcaaagatgcttgaattacactattctcctctcttatgttaaaatatacactccctttctcttttattcaaaacatattagaaaatattt 19546997  T
Q  349 tactccc 355  Q
    |||||||    
T  19546996 tactccc 19546990  T

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Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 291850 - 291767
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    |||||||||||||||| || |||||||||||  || || ||| |||||||| |||||||||||| | ||||||| |||||||||    
T  291850 ctcccctcccctcaaaaatgcttgaattacaccctcctcccctcttatgttcaaatatacactcccctcccctcttattcaaaa 291767  T

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Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 11345426 - 11345363
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||||||||||||||||||||    
T  11345426 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactc 11345363  T

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Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 16067954 - 16067875
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||| ||||||||||| ||   ||| | ||||||||||||||||||||| |||||| || |||||||||||||    
T  16067954 ccctcaaagatgcttgaattacactcccattctctcttatgttaaaatatacactcacatcccttcttattcaaaacata 16067875  T

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Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 18364639 - 18364702
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||||||||||||||||||||    
T  18364639 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactc 18364702  T

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Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 23309687 - 23309600
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || | | ||||  ||||||||||||||| | ||||||| |||||||||||||    
T  23309687 ctcccctcccctcaaagatgcttgaattacactcccctcctctcttaacttaaaatatacactcccctcccctcttattcaaaacata 23309600  T

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Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 27255294 - 27255357
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||| |||||||| ||||||||||| ||| || ||| |||||||||||||||||||||    
T  27255294 ctcccctcccttcaaagatgcttgaattacactctcctcccctcttatgttaaaatatacactc 27255357  T

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Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 27256041 - 27255954
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| ||||| ||||||||||||||  | ||||||  |||||||||||||    
T  27256041 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatattaaaatatacacttccctcccctattattcaaaacata 27255954  T

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Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 30604684 - 30604771
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||||||||||||  || ||||||||||  |||| | ||||||||||||||||||||| |||||| || | |||||||||||    
T  30604684 ctcctctcccctcaaagatgattaaattacattccccttctctcttatgttaaaatatacactcccatcccttcttcttcaaaacata 30604771  T

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Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 32737238 - 32737151
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||||||||||| ||||||||||| | | || |||  ||| |||||||||||||||| | ||||||| |||||||||||||    
T  32737238 ctcctctcccctcaaagatgcttgaattacactttcctccccttttaagttaaaatatacactcccctcccctcttattcaaaacata 32737151  T

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Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 40927502 - 40927585
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||||||||| ||||| ||||||||||| |   || ||| ||||||||||||||||||||| | ||||||| |||||||||    
T  40927502 ctcccctcccctctaagatgcttgaattacacttccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaa 40927585  T

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Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 41865751 - 41865665
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||||||||||||| ||  | ||||  ||| |||||||||||||||  | ||||||| |||||||||||||    
T  41865751 ctcccctcccctcaaagatacttgaattacactc-ccctcccctttaagttaaaatatacacttccctcccctcttattcaaaacata 41865665  T

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Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 47793992 - 47794079
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||||||||||| ||||||||||| ||  ||  || ||||| |||||||||||||| || ||||||| |||||||||||||    
T  47793992 ctcctctcccctcaaagatgcttgaattacactcccctcacctcttatcttaaaatatacactttcttcccctcttattcaaaacata 47794079  T

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Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 27395137 - 27395055
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||| |||||||| ||||||||||||||  || ||| |||||||||||||||||||||   ||||| | |||||||||||||    
T  27395137 ctcccttcaaagatgcttgaattacattcccctcccctcttatgttaaaatatacactccactccccacttattcaaaacata 27395055  T

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Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 49764502 - 49764586
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacac-tctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||| ||||||||||| |   || ||| ||||||||||||||||||| |||| ||||||| |||||||||||||    
T  49764502 ccctcccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacacttctc-tcccctcttattcaaaacata 49764586  T

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Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 45241212 - 45241280
Alignment:
Q  253 cccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatccc 321  Q
    ||||||||||||||||| ||||||||||| ||  || | | ||||||||||||||||||||||| ||||    
T  45241212 cccctcccctcaaagatgcttgaattacactcccctcctctcttatgttaaaatatacactctcctccc 45241280  T

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Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 1763696 - 1763739
Alignment:
Q  295 ttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  1763696 ttatgttaaaatatacactctcctcccctcttattcaaaacata 1763739  T

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Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 3090485 - 3090422
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||||||| |||||||| || ||  || ||| |||||||||||||||||||||    
T  3090485 ctcccctcccctcaaagatgcttgaattgcactcccctcccctcttatgttaaaatatacactc 3090422  T

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Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 338
Target Start/End: Original strand, 5963086 - 5963153
Alignment:
Q  271 cttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| || || ||| ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  5963086 cttgaattgcactcctctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 5963153  T

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Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 22524127 - 22524214
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||| |||||||| ||||||||||| || ||| ||| |||| ||||||| |||||||  | ||||||| |||||||||||||    
T  22524127 ctcctctcccttcaaagatgcttgaattacactcctctcccctcttaagttaaaagatacacttccctcccctcttattcaaaacata 22524214  T

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Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 40036455 - 40036400
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||| ||||||||||||||  || ||| |||||||||||||||||||||    
T  40036455 ccctcaaagatgcttgaattacattcccctcccctcttatgttaaaatatacactc 40036400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 40974049 - 40974132
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||| |||||  |||||||||| ||  || ||| |||||||||||||||||| || | ||||||| |||||||||||||    
T  40974049 cctcccctctaagatgtttgaattacactcccctcccctcttatgttaaaatatacaatcccctcccctcttattcaaaacata 40974132  T

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Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 41586654 - 41586741
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacatt--cttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||||||||||| ||||||||||| |  | ||| ||| ||||||||||||||||||  ||| ||||||| |||||||||||||    
T  41586654 ctcctctcccctcaaagatgcttgaattacactaccctctcccctcttatgttaaaatataca--ctcctcccctcttattcaaaacata 41586741  T

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Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 44951053 - 44950970
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    |||||||| ||||||||||  ||||| |||| ||  || ||| |||||||||||||||||||| || ||||||| |||||||||    
T  44951053 ctcccctctcctcaaagatgtttgaaatacactcacctcccctcttatgttaaaatatacactttcctcccctcttattcaaaa 44950970  T

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Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 22130464 - 22130402
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  22130464 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 22130402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 313
Target Start/End: Original strand, 27396710 - 27396764
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||| ||||||||||| || ||| ||| ||||||||||||||||||||    
T  27396710 ccctcaaagatgcttgaattacactcatctcccctcttatgttaaaatatacact 27396764  T

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Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 41864986 - 41865048
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||| |||||||| ||||||||||| |||  ||||| |||| |||||||||||||||    
T  41864986 ctcccctcccgtcaaagatgcttgaattacactctcattccctcttaagttaaaatatacact 41865048  T

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Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 20612176 - 20612103
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctc 324  Q
    ||||||||||||| ||||| ||||||||||| |   |||||| |||||||||||||||||| || | |||||||    
T  20612176 ctcccctcccctctaagatgcttgaattacacttcccttccctcttatgttaaaatatacaatcccctcccctc 20612103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 54403573 - 54403630
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||    
T  54403573 ctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 54403630  T

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Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 53490787 - 53490735
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||| ||||||||||| || ||||| | |||||||||||||||||||||    
T  53490787 tcaaagatccttgaattacactcatcttctctcttatgttaaaatatacactc 53490735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 357
Target Start/End: Original strand, 1363435 - 1363500
Alignment:
Q  295 ttatgttaaaatatacactctcatcccctcctattcaaaaca---tagaaaacattttactcccct 357  Q
    ||||||||||||||||| |||| ||||||| |||||||| ||   |||||||||||| ||||||||    
T  1363435 ttatgttaaaatatacattctcctcccctcttattcaaagcatattagaaaacatttcactcccct 1363500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 338
Target Start/End: Complemental strand, 2756662 - 2756587
Alignment:
Q  263 caaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||| ||||||||||| ||  || ||| ||||||||||||||||||||| | | || || |||||||||||||    
T  2756662 caaagatgcttgaattacactcccctcccctcttatgttaaaatatacactccccttccatcttattcaaaacata 2756587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 10689493 - 10689442
Alignment:
Q  287 cttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||| | |||||||||||||||| |||| ||||||| |||||||||||||    
T  10689493 cttccctcctatgttaaaatatacattctcctcccctcttattcaaaacata 10689442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 353
Target Start/End: Complemental strand, 19538409 - 19538328
Alignment:
Q  275 aattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaaca---tagaaaacattttactc 353  Q
    ||||||| | |||||||  ||||||||||||||||||||  | ||| ||| |||||||||||   |||||||||||||||||    
T  19538409 aattacactattcttccatcttatgttaaaatatacacttccctccactcttattcaaaacatattagaaaacattttactc 19538328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 20030642 - 20030583
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||||| |||||||||||||   || ||| |||||||||||| |||||||    
T  20030642 ccctcccctcaaagatgcttgaattacatttccctcccctcttatgttaaaacatacact 20030583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 23682000 - 23682063
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||| |||||||| ||||| ||| | || ||| ||| |||||||||||||||||||||    
T  23682000 ctcccctcccttcaaagatgcttgagttatactcctctcccctcttatgttaaaatatacactc 23682063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 24054237 - 24054300
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||| |||||||| ||||| ||| | || ||| ||| |||||||||||||||||||||    
T  24054237 ctcccctcccttcaaagatgcttgagttatactcctctcccctcttatgttaaaatatacactc 24054300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 49079968 - 49080027
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatac 310  Q
    |||||||||||| ||||||  |||||||||| ||| || ||| |||||||||||||||||    
T  49079968 ctcccctcccctaaaagatcattgaattacactctcctcccctcttatgttaaaatatac 49080027  T

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Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 50700574 - 50700508
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtccttca 72  Q
    ||||||||||||||||||||| |||   |||||||||||||||      |||||||||||||||||||||||    
T  50700574 ttaagaaatataattaattttatattgtaaaatgatattatga-----attgttttacaaaattgtccttca 50700508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 4558806 - 4558744
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||| | ||  || ||| |||| |||||||||||||||    
T  4558806 ctcccctcccctcaaagatgcttgaattatactcccctcccctcttaagttaaaatatacact 4558744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 10888471 - 10888409
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||| ||||||| ||  || ||| |||| |||||||||||||||    
T  10888471 ctcccctcccctcaaagatgcttaaattacactcccctcccctcttaagttaaaatatacact 10888409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 11056627 - 11056565
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||| |||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  11056627 ctcccctccccttaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 11056565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 23308945 - 23309007
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||| |||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  23308945 ctcccctccccttaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 23309007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 24542319 - 24542349
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattaca 281  Q
    |||||||||||||||||||||||||||||||    
T  24542319 ctcccctcccctcaaagatacttgaattaca 24542349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 32221618 - 32221718
Alignment:
Q  257 tcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaaca---tagaaaacattttactc 353  Q
    ||||| ||||||| |||||||| || ||  ||||||  |  ||||||||||||||||| ||||||||| ||||||||| |   |||||||||||| ||||    
T  32221618 tccccccaaagatgcttgaattgcactccccttccctttcttgttaaaatatacactcccatcccctcttattcaaaatatattagaaaacatttcactc 32221717  T
Q  354 c 354  Q
    |    
T  32221718 c 32221718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 44500102 - 44500048
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||    
T  44500102 ccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 44500048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 13623189 - 13623246
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||| ||||||||||| |   || ||| ||||||||||||||||||||    
T  13623189 ctcccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacact 13623246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 54606448 - 54606407
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaac 335  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  54606448 cttatgttaaaatatacactcccctcccctcttattcaaaac 54606407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6466379 - 6466442
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcct 69  Q
    |||||||||||||||||| |||| |  ||||| ||||||||||     |||||||||||||||||||||    
T  6466379 ttaagaaatataattaatattgtgtgggaaaaagatattatga-----gttgttttacaaaattgtcct 6466442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 18480080 - 18480112
Alignment:
Q  203 ttcacaaagcgacatataatttaagacggagag 235  Q
    |||||||||||| ||||||||||||||||||||    
T  18480080 ttcacaaagcgatatataatttaagacggagag 18480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 235
Target Start/End: Complemental strand, 19547149 - 19547121
Alignment:
Q  207 caaagcgacatataatttaagacggagag 235  Q
    |||||||||||||||||||||||||||||    
T  19547149 caaagcgacatataatttaagacggagag 19547121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 22129739 - 22129783
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||||||||||||| | ||||||| |||||||||||||    
T  22129739 cttaagttaaaatatacactcccctcccctcttattcaaaacata 22129783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 27397541 - 27397497
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||| || | ||||||| |||||||||||||    
T  27397541 cttatgttaaaatatacattcccctcccctcttattcaaaacata 27397497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 40035789 - 40035833
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||| |||| | ||||||| |||||||||||||    
T  40035789 cttatgttaaaatatatactcccctcccctcttattcaaaacata 40035833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44804774 - 44804814
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattat 41  Q
    ||||||||||||||||||||||||| |||||  ||||||||    
T  44804774 ttaagaaatataattaattttgtatgagaaatagatattat 44804814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 48224204 - 48224120
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaac 335  Q
    |||| ||||| |||||||| ||||||||||| ||  || ||  ||||||||||||||||||||  | ||||||| | ||||||||    
T  48224204 ctcctctcccttcaaagatgcttgaattacactcccctcccatcttatgttaaaatatacacttccctcccctctttttcaaaac 48224120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 11759397 - 11759484
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || |||||||||||||||||||||||| || ||||||| |||||||||||||    
T  11759397 ctcccctcccctcaaagatgcttgaattacactcccctccccacttatgttaaaatatacactttcctcccctcttattcaaaacata 11759484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 357
Target Start/End: Complemental strand, 8628115 - 8628010
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaaca---tagaaaacattttac 351  Q
    |||||| |||||||| ||||||||||| | |||||| | ||||||||||||||||||||||| ||||||| |||||||||||   ||||| |||||| ||    
T  8628115 cctcccttcaaagatgcttgaattacacttttcttctctcttatgttaaaatatacactctcctcccctcttattcaaaacattttagaatacatttcac 8628016  T
Q  352 tcccct 357  Q
    ||||||    
T  8628015 tcccct 8628010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 3075315 - 3075399
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaac 335  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||| | ||||||| ||||||||||    
T  3075315 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactcccttcccctcttattcaaaac 3075399  T

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Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 6292523 - 6292610
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||||||  || ||| |||| ||||||||||||| || | ||||||| |||||||||||||    
T  6292523 ctcccctcccctcaaagatgcttgaattacattcccctcccctcttaagttaaaatatacaatcccctcccctcttattcaaaacata 6292610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 22934298 - 22934385
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  22934298 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 22934385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 39998379 - 39998466
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||| || ||| |||| ||||||||| |||||| | ||||||| |||||||||||||    
T  39998379 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatacacactcccctcccctcttattcaaaacata 39998466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 40791822 - 40791736
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||| |||||||| ||||||||||| || ||| ||| ||||||||||||||||||||| | || |||| |||||||||||||    
T  40791822 tcccctcccatcaaagatgcttgaattacactcctctcccctcttatgttaaaatatacactcccctcacctcttattcaaaacata 40791736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 10216203 - 10216116
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||  |||||||||||||||| | ||||||| |||||||||||||    
T  10216203 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttcagttaaaatatacactcccctcccctcttattcaaaacata 10216116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 17565406 - 17565319
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||| ||||||||||| ||| ||||||| || ||| ||| |||||||||||||||||||||   ||||||| |||||||||||||    
T  17565406 ctccccttccctcaaagatgcttcaattacactcctctcccctcttatgttaaaatatacactcctctcccctcttattcaaaacata 17565319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 34364646 - 34364564
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||  ||     ||| ||||||||||||||||||||||| ||||||| |||||||||||||    
T  34364646 ctcccctcccctcaaagatgcttgaattaccctc-----ccctcttatgttaaaatatacactctcctcccctcttattcaaaacata 34364564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 37837645 - 37837558
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||| ||||||||| ||||||||||||||| || ||| ||||| ||||||||||||||  | ||| |||||||||||||||||    
T  37837645 ctcctctcctctcaaagatgcttgaattacattctcctcccctcttatcttaaaatatacacttccctcctctcctattcaaaacata 37837558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 14363786 - 14363871
Alignment:
Q  253 cccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | || |||| |||||||||||||    
T  14363786 cccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcacctcttattcaaaacata 14363871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 11760135 - 11760071
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactct 315  Q
    |||||||||| |||||||| ||||||||||||||| || | | ||||||||||||||||||||||    
T  11760135 ctcccctcccttcaaagatgcttgaattacattctcctcctctcttatgttaaaatatacactct 11760071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 357
Target Start/End: Original strand, 40298939 - 40299037
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaaca---tagaaaacattttactcccct 357  Q
    |||||||| ||||||||||| ||  ||||   |||||||||||||||||||| || ||||||| |||||||||||   ||||||| |||||||||||||    
T  40298939 tcaaagatgcttgaattacactccccttcattcttatgttaaaatatacactttcctcccctcttattcaaaacatattagaaaatattttactcccct 40299037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 43764092 - 43764194
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaaca---tagaaaacattttact 352  Q
    ||||| ||||||||  |||||||||| |  ||| ||| ||||||||||||||||||||||| ||||||  |||||||||||   ||||||| ||||||||    
T  43764092 ctcccatcaaagatgtttgaattacacttctctcccctcttatgttaaaatatacactctcctccccttttattcaaaacatattagaaaatattttact 43764191  T
Q  353 ccc 355  Q
    |||    
T  43764192 ccc 43764194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 44746904 - 44746820
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||| |||||||||| ||| || |||  || ||||||||||||||||||||| | || |||| |||||||||||||    
T  44746904 ccctcccctcaaatatacttgaatcacactcatctctcctcttatgttaaaatatacactcccctctcctcttattcaaaacata 44746820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 8442665 - 8442752
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||| ||||||||| ||||||||||| |||  | ||| ||||||||||||||||||| | | | ||||| |||||||||||||    
T  8442665 ctcccctcctctcaaagatgcttgaattacactctcttcccctcttatgttaaaatatacacacccctaccctcttattcaaaacata 8442752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 11140103 - 11140186
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||| || ||| |||||||||||||||||| ||  || ||| ||||||||||||||||||||| | ||||||| |||||||||    
T  11140103 ctcccgtctcctaaaagatacttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcatattcaaaa 11140186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 11141129 - 11141066
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||||||| ||||||||||||||  || | | |||||||||||||||||||||    
T  11141129 ctcccctcccctcaaagatgcttgaattacattcccctcctctcttatgttaaaatatacactc 11141066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 24810323 - 24810237
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||| |||||||||| || || ||||  ||||||||||||||||  || | ||||||| |||||||||||||    
T  24810323 ctcccctcccctcaaagatatttgaattacactc-tcatcccctttatgttaaaatatacgttcccctcccctcttattcaaaacata 24810237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 24778003 - 24778084
Alignment:
Q  257 tcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacac-tctcatcccctcctattcaaaacata 338  Q
    |||| |||||||||||||||||||| ||| || ||| ||||||||||||||||||| |||| | ||||| |||||||||||||    
T  24778003 tcccatcaaagatacttgaattacactctcctcccctcttatgttaaaatatacacttctc-taccctcttattcaaaacata 24778084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 34679987 - 34679906
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||| ||||||||||| ||| || ||| | |||||||||||||||||| || | ||||| |||||||||||||    
T  34679987 ctcccctcaaagatgcttgaattacactctcctcccctcgtatgttaaaatatacactttcct-ccctcttattcaaaacata 34679906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 44147688 - 44147614
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaaca 336  Q
    |||||||| ||||||||||||||| |||||| | ||||| ||||||||||||||| || |||| | |||||||||    
T  44147688 tcaaagatgcttgaattacattctccttccctcctatgtcaaaatatacactctcctctcctcttcttcaaaaca 44147614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 32905389 - 32905308
Alignment:
Q  257 tcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||| ||||||||||| ||| || ||   |||||||||||||||||||  | ||||||| |||||||||||||    
T  32905389 tcccctcaaagatgcttgaattacactctcctccctttttatgttaaaatatacacttccctcccctcttattcaaaacata 32905308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 13440161 - 13440121
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  13440161 cttatgttaaaatatacactctcatcccctcttattcaaaa 13440121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 14879529 - 14879589
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||||||||||||||||||  |||||||||| ||| || ||| ||||||||||||||||||    
T  14879529 ctcccctcccctcaaagatgtttgaattacactctcctcccctcttatgttaaaatataca 14879589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 17496986 - 17496907
Alignment:
Q  258 cccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||  |||||||||| ||  || ||| |||||||||||||||||| |||| ||||||| |||||||||||||    
T  17496986 cccctcaaagatgtttgaattacactcc-ctcccctcttatgttaaaatatacaatctcttcccctcttattcaaaacata 17496907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 26928197 - 26928284
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttccc-acttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||| || |||||||| ||||||||||| | | |||||| | ||||||||||||||||||| || ||||||| |||||||||||||    
T  26928197 ctccccttccttcaaagatgcttgaattacact-tccttccccatttatgttaaaatatacactttcctcccctcttattcaaaacata 26928284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 5872801 - 5872742
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||| ||||||||||| ||| |||||   ||||||||||||||||||||    
T  5872801 cctcccctcaaagatgcttgaattacactctacttcctttttatgttaaaatatacactc 5872742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 14880256 - 14880173
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    |||| |||||||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||  | ||||||| |||| ||||    
T  14880256 ctcctctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacacttccctcccctcttattaaaaa 14880173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 17496270 - 17496338
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatccc 321  Q
    ||||||||||||||||||| ||||||||||| |||| | ||| ||  ||||||||||||||||||| ||||    
T  17496270 ctcccctcccctcaaagatccttgaattacactcttatcccctct--tgttaaaatatacactctcctccc 17496338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 29636446 - 29636367
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||| ||||||||||| ||  || ||| |||| ||||||||||||||||   ||||||| |||||||||||||    
T  29636446 ccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactccactcccctcttattcaaaacata 29636367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 4256571 - 4256628
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||||||||||||||| ||| ||||||||||   ||||| ||||||||||||||||||    
T  4256571 ccctcccctcaaagatgcttaaattacattcacattccctcttatgttaaaatataca 4256628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 6099540 - 6099484
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||||||||| ||||||||||| ||| ||  || ||||||||||||||||||    
T  6099540 cctcccctcaaagatgcttgaattacactctcctctcctcttatgttaaaatataca 6099484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 6293265 - 6293205
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||    
T  6293265 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatataca 6293205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 29851175 - 29851144
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  29851175 ttaagaaatataattaattttgtataagaaaa 29851144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 36016827 - 36016764
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||| ||||||||||| ||||||||||| ||  || | | |||||||||||||||||||||    
T  36016827 ctccccttccctcaaagatgcttgaattacaatcccctcctctcttatgttaaaatatacactc 36016764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 17734973 - 17734919
Alignment:
Q  257 tcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||||||||| ||  |||||||||| || ||||||| ||||||||||||||||||    
T  17734973 tcccctcaaatatgtttgaattacactcctcttccctcttatgttaaaatataca 17734919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 25597782 - 25597844
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || | | |||| |||||||||||||||    
T  25597782 ctcccctcccctcaaagatgcttgaattacactcccctcctctcttaagttaaaatatacact 25597844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 357
Target Start/End: Complemental strand, 25598525 - 25598417
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact-ctcatcccctcctattcaaa--acatagaaaacatt 347  Q
    |||| |||| ||||||||| ||||||||||| ||  || ||| |||| ||||||||||||||| ||| ||||||| ||||||||  | |||||||| |||    
T  25598525 ctcctctcctctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactactc-tcccctcttattcaaaatatatagaaaaaatt 25598427  T
Q  348 ttactcccct 357  Q
    | ||||||||    
T  25598426 tcactcccct 25598417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 314
Target Start/End: Complemental strand, 37266201 - 37266147
Alignment:
Q  260 cctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||| ||| ||||||| ||| || ||| |||||||||||||||||||||    
T  37266201 cctcaaagattctttaattacactctcctcccctcttatgttaaaatatacactc 37266147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 37304950 - 37304872
Alignment:
Q  261 ctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacatag 339  Q
    ||||||||| ||||||||||| ||| |||| |  ||||||||||||||| ||||   ||||| | ||||||||||||||    
T  37304950 ctcaaagatgcttgaattacactctccttctcttttatgttaaaatatagactcctctccccacttattcaaaacatag 37304872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 43777055 - 43777001
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||| ||||||||||| ||  |||||| |||||||| |||||||||||    
T  43777055 ccctcaaagatgcttgaattacactccacttccctcttatgtttaaatatacact 43777001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 44284418 - 44284356
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||| | |||| ||||||||||| ||  || ||| ||||||||||||||||||||    
T  44284418 ctcccctcccctaagagatgcttgaattacactcccctcccctcttatgttaaaatatacact 44284356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 3075144 - 3075201
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||||||||||||||| ||||||||||| |   || ||| ||||||||||||||||||    
T  3075144 ccctcccctcaaagatgcttgaattacactaccctcccctcttatgttaaaatataca 3075201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 6099391 - 6099432
Alignment:
Q  295 ttatgttaaaatatacactctcatcccctcctattcaaaaca 336  Q
    ||||||||||||||||||| || ||||||| |||||||||||    
T  6099391 ttatgttaaaatatacactttcctcccctcttattcaaaaca 6099432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11587804 - 11587868
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcctt 70  Q
    |||||||||||||||||| ||||||  ||||  ||||||||||     ||||||||||||||||||||||    
T  11587804 ttaagaaatataattaatattgtatgggaaagagatattatga-----gttgttttacaaaattgtcctt 11587868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 32904281 - 32904204
Alignment:
Q  257 tcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    |||| |||||||| ||||||||||| ||  || ||| ||||||||||||||||||||  | ||| ||| |||||||||    
T  32904281 tcccttcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacacttccctccactcttattcaaaa 32904204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 8297827 - 8297783
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||||||||||||  ||||||||| |||||||||||||    
T  8297827 cttaagttaaaatatacacttccatcccctcttattcaaaacata 8297783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 8437949 - 8437993
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||| | ||||||  |||||||||||||    
T  8437949 cttatgttaaaatatacactcccctccccttttattcaaaacata 8437993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 13422091 - 13422047
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||| | ||| ||| |||||||||||||    
T  13422091 cttatgttaaaatatacactcccctcctctcttattcaaaacata 13422047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 25485483 - 25485407
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||  |||||||||| ||  || ||| |||| |||||||||||||||| | | ||||| |||||||||||||    
T  25485483 tcaaagatgtttgaattacactcccctcccctcttaagttaaaatatacactcccctaccctcttattcaaaacata 25485407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 31739525 - 31739597
Alignment:
Q  258 cccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattc 330  Q
    ||||| |||||| ||||||||||| | |  | ||| ||||||||||||||||||||| | ||||||| |||||    
T  31739525 cccctaaaagatgcttgaattacactgtcatcccctcttatgttaaaatatacactcccctcccctcttattc 31739597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 31846499 - 31846543
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||| | | ||||| |||||||||||||    
T  31846499 cttatgttaaaatatacactccccttccctcttattcaaaacata 31846543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 34923893 - 34923937
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||| | ||||||| |||| ||||||||    
T  34923893 cttatgttaaaatatacactcccctcccctcttatttaaaacata 34923937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35544038 - 35544101
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcct 69  Q
    |||||||||||||||||| ||||||  ||||  ||||||||||     |||||||||||||||||||||    
T  35544038 ttaagaaatataattaatattgtatgggaaagagatattatga-----gttgttttacaaaattgtcct 35544101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 37265513 - 37265589
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||| || ||||||||||| |||| ||  | |||||||||||| ||||||| || || |||| |||||||||||||    
T  37265513 tcaaatatgcttgaattacactcttattttctcttatgttaaaacatacactttcctctcctcttattcaaaacata 37265589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 37304242 - 37304298
Alignment:
Q  257 tcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||  | |||||||| || ||||| |||| |||||||||||||||||    
T  37304242 tcccctcaaagatgttcgaattacactcctcttcacactcatgttaaaatatacact 37304298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 40791061 - 40791117
Alignment:
Q  257 tcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||  |||||||| | ||| || ||| ||||||||||||||||||||    
T  40791061 tcccctcaaagatgtttgaattatactctcctcccctcttatgttaaaatatacact 40791117  T

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Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 33146770 - 33146683
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||||||||| |||| || ||| ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  33146770 ctcccctcccctcaaagatacttgaactacactcctctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 33146683  T

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Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 3514809 - 3514896
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||| || ||| |||||||||| ||||||| ||||||||||||||||||| | | ||||||| |||||||||||||    
T  3514809 ctcccctcccctcaaatatgcttcaattacattcatcttccctcttatgttaaaatatacacccccctcccctcttattcaaaacata 3514896  T

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Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 15006437 - 15006523
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||||||||||||||| |  || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  15006437 ctcccctcccctcaaagatacttgaattacatccc-ctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 15006523  T

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Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 3045666 - 3045604
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  3045666 ctcccctcccctcaaagatgcttgaattaaattcttcttccctcttatgttaaaatatacact 3045604  T

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Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 359
Target Start/End: Original strand, 17829060 - 17829168
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaaca---tagaaaacatttta 350  Q
    |||||||||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||| | ||||||| |||||||||||   |||||||| ||| |    
T  17829060 ccctcccctcaaagatgcttgaattacactccactcccctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaacttttca 17829159  T
Q  351 ctccccttt 359  Q
    |||||||||    
T  17829160 ctccccttt 17829168  T

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Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 20894346 - 20894261
Alignment:
Q  253 cccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  20894346 cccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 20894261  T

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Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 37330431 - 37330355
Alignment:
Q  262 tcaaagatacttgaattacattcttcttc-ccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| ||||||||||| ||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||    
T  37330431 tcaaagatgcttgaattacactct-cttctcctcttatgttaaaatatacactctcatcccctcttattcaaaacata 37330355  T

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Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 40768850 - 40768927
Alignment:
Q  261 ctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||| ||||||||||||||| ||| ||  |||||||||||||||||||| | |||||| ||||||||||||||    
T  40768850 ctcaaagatgcttgaattacattctcctttccttttatgttaaaatatacactcccctccccttctattcaaaacata 40768927  T

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Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 34173055 - 34173139
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||| ||||||||||| |   || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  34173055 ccctcccctcaaagatgcttgaattacactaccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 34173139  T

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Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 6229952 - 6229889
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||||||| ||||||||||| ||  |||||| |||||||||||||||||||||    
T  6229952 ctcccctcccctcaaagatccttgaattacactccccttccctcttatgttaaaatatacactc 6229889  T

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Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 11051565 - 11051652
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||| |||||||||||||||||| ||  |  | | ||||||||||||||||||||| | ||||||| |||||||||||||    
T  11051565 ctcccctcccctaaaagatacttgaattacactccccacctctcttatgttaaaatatacactcccctcccctcttattcaaaacata 11051652  T

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Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 11563807 - 11563890
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||| ||||||||||| |||  | ||| ||||||||||||||||||||  | ||||||| |||||||||||||    
T  11563807 cctcccctcaaagatgcttgaattacactctcatcccctcttatgttaaaatatacacttccttcccctcttattcaaaacata 11563890  T

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Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 35899144 - 35899231
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||| ||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  35899144 ctcccctcccctcaaagatgcttcaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 35899231  T

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Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 22606322 - 22606408
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacat 337  Q
    ||||||||||||||||||| |||||||||||  | ||| | | ||||||||||||||||||||  | ||||||| ||||||||||||    
T  22606322 ctcccctcccctcaaagatccttgaattacacacctctcctctcttatgttaaaatatacacttccctcccctcttattcaaaacat 22606408  T

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Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 5475201 - 5475141
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||||||||||||| ||||||||||| ||| || ||| ||||||||||||||||||    
T  5475201 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttatgttaaaatataca 5475141  T

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Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 7940058 - 7939974
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||| |||||||||  |||||||||| ||| || |||  |||||||||||||||||||| | ||||||| |||||||||||||    
T  7940058 ccctcctctcaaagatgtttgaattacactctcctccccttttatgttaaaatatacactcccctcccctcttattcaaaacata 7939974  T

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Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 14743184 - 14743108
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| ||||||||| | || ||||||| |||||||||||||||||||| |  ||||||| |||||||||||||    
T  14743184 tcaaagatgcttgaattatactcatcttccctcttatgttaaaatatacactttactcccctcgtattcaaaacata 14743108  T

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Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 34248130 - 34248043
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacac-tctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||| |||| ||||||| |||||||||||||    
T  34248130 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttctc-tcccctcttattcaaaacata 34248043  T

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Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 37198938 - 37199017
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||| ||||||||||| ||     ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  37198938 ccctcccctcaaagatgcttgaattacactc-----ccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 37199017  T

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Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 552567 - 552488
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  552567 ccctcaaagatgcttgaattacactcccctccccccttaagttaaaatatacactcccctcccctcttattcaaaacata 552488  T

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Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 11796146 - 11796233
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| |||||||| ||| ||||||| ||  || ||| ||||||||||||| ||||||| | ||||||| |||||||||||||    
T  11796146 ctcccctcccttcaaagatgcttcaattacactcccctcccctcttatgttaaaatgtacactcccctcccctcttattcaaaacata 11796233  T

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Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 43439139 - 43439222
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||| ||||||||  |||| ||||| |||| | | | ||||||||||||||||||||||| ||||||| |||||||||||||    
T  43439139 cctcccttcaaagatgtttgagttacactcttttcctctcttatgttaaaatatacactctcgtcccctcttattcaaaacata 43439222  T

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Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 28167546 - 28167616
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatccc 321  Q
    ||||||| |||||||||||  |||||||||| ||  |||||| ||||||||||||||||||||||| ||||    
T  28167546 ctccccttccctcaaagatgattgaattacactccccttccctcttatgttaaaatatacactctcctccc 28167616  T

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Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 7939338 - 7939395
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||| |||||||| ||||||||||| ||| |||||| ||||||||||||||||||||    
T  7939338 ctcccttcaaagatgcttgaattacactctccttccctcttatgttaaaatatacact 7939395  T

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Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 41521767 - 41521707
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttccc-acttatgttaaaatatacactc 314  Q
    |||||||||||||||| |||||||||||||| |||||||  |||||||||||||||||||||    
T  41521767 ccctcccctcaaagatgcttgaattacattc-tcttcccttcttatgttaaaatatacactc 41521707  T

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Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 3044937 - 3045021
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||||||||| ||||||||||| ||| ||  || ||||||||||||||||||||| | | || || |||||||||||||    
T  3044937 cccttccctcaaagatgcttgaattacactctcctcacctcttatgttaaaatatacactccccttccatcttattcaaaacata 3045021  T

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Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 338
Target Start/End: Complemental strand, 10357168 - 10357101
Alignment:
Q  271 cttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||| ||  || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  10357168 cttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 10357101  T

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Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 13873322 - 13873409
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||| ||||||||||| ||||||||||| |   ||  || ||||||||||||||||||||| | ||| ||| |||||||||||||    
T  13873322 ctccccttccctcaaagatgcttgaattacaattccctcacctcttatgttaaaatatacactcccctcctctcttattcaaaacata 13873409  T

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Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 14013447 - 14013534
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||| ||||||||||| ||||||||||| |   ||  || ||||||||||||||||||||| | ||| ||| |||||||||||||    
T  14013447 ctccccttccctcaaagatgcttgaattacaattccctcacctcttatgttaaaatatacactcccctcctctcttattcaaaacata 14013534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 31363904 - 31363987
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||| |||||||||||  |  |||||| ||||||||||||||||||||  | ||| |||  ||||||||||||    
T  31363904 cctcccctcaaagatgcttgaattacacaccccttccctcttatgttaaaatatacacttccctcctctctcattcaaaacata 31363987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 33146041 - 33146104
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||||||| |||||||| || ||  || ||| |||||||||||||||||||||    
T  33146041 ctcccctcccctcaaagatgcttgaattgcactcccctcccctcttatgttaaaatatacactc 33146104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 37009727 - 37009664
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||| ||||||||||| ||| ||||||| || ||| ||| |||||||||||||||||||||    
T  37009727 ctccccttccctcaaagatgcttaaattacactcctctcccctcttatgttaaaatatacactc 37009664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 37199667 - 37199604
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||||||||||  |||||||||| ||  || ||| |||||||||||||||||||||    
T  37199667 ctcccctcccctcaaagatgtttgaattacactcccctcccctcttatgttaaaatatacactc 37199604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 38972470 - 38972557
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| |||||||||| ||| ||||||| ||  || ||| | || |||||||||||||||| | ||||||| |||||||||||||    
T  38972470 ctcccctctcctcaaagatgcttcaattacactcccctcccctcctaagttaaaatatacactcccctcccctcttattcaaaacata 38972557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 11470547 - 11470497
Alignment:
Q  264 aaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||| ||||||||||| || ||||||| |||||||||||||||||||||    
T  11470547 aaagatgcttgaattacactcatcttccctcttatgttaaaatatacactc 11470497  T

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Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 16110488 - 16110549
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||| || ||||||||||| || ||| ||| |||| |||||||||||||||    
T  16110488 tcccctcccctcaaaaatgcttgaattacactcctctcccctcttaagttaaaatatacact 16110549  T

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Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 32875176 - 32875225
Alignment:
Q  264 aaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||| ||||||||||| |||||||| | ||||||||||||||||||||    
T  32875176 aaagatgcttgaattacactcttcttctctcttatgttaaaatatacact 32875225  T

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Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 34830762 - 34830823
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactct 315  Q
    ||||||| |||||||||||||||||||| ||  || ||| || |||||||||||||||||||    
T  34830762 ccctcccttcaaagatacttgaattacactcccctcccctctcatgttaaaatatacactct 34830823  T

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Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 37009004 - 37009088
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacac-tctcatcccctcctattcaaaacata 338  Q
    ||||||| |||||||| ||||||||||| ||  || ||| ||||||||||||||||||| |||| ||||||| |||| ||||||||    
T  37009004 ccctcccatcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacacttctc-tcccctcttatttaaaacata 37009088  T

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Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 40769436 - 40769367
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatccc 321  Q
    ||||||||||||||||||  |||||||||| ||  ||  || ||||||||||||||||||||||| ||||    
T  40769436 tcccctcccctcaaagatggttgaattacactcccctcacctcttatgttaaaatatacactctcctccc 40769367  T

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Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 42791459 - 42791532
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctc 324  Q
    ||||||||||||| ||||| ||||||||||| |  ||| ||| |||||||||||||||||| || | |||||||    
T  42791459 ctcccctcccctctaagatgcttgaattacacttctctcccctcttatgttaaaatatacaatcccctcccctc 42791532  T

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Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 5474673 - 5474717
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||    
T  5474673 cttatgttaaaatatacactcccctcccctcttattcaaaacata 5474717  T

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Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 11796877 - 11796817
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||    
T  11796877 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatataca 11796817  T

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Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 31709805 - 31709745
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||| ||||||||||| ||| ||||||| || ||| ||| ||||||||||||||||||    
T  31709805 ctccccttccctcaaagatgcttaaattacactcctctcccctcttatgttaaaatataca 31709745  T

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Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 34173781 - 34173721
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||||||||||||||||||  |||||||||| ||  || ||| ||||||||||||||||||    
T  34173781 ctcccctcccctcaaagatgtttgaattacactcccctcccctcttatgttaaaatataca 34173721  T

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Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 41078183 - 41078139
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||    
T  41078183 cttatgttaaaatatacactcccctcccctcttattcaaaacata 41078139  T

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Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 27332057 - 27332022
Alignment:
Q  11 taattaattttgtataagaaaatgatattatgagtt 46  Q
    ||||||||||||||||||||| ||||||||||||||    
T  27332057 taattaattttgtataagaaagtgatattatgagtt 27332022  T

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Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 31597231 - 31597294
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||| ||| ||||||||||| ||  || ||| |||||||||||||||| ||||    
T  31597231 ctcccctcccctcaaggatgcttgaattacactcacctcccctcttatgttaaaatataaactc 31597294  T

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Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 39160349 - 39160294
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaat 306  Q
    ||||||||||||||||||| ||||||||||||||  || ||| |||| ||||||||    
T  39160349 ctcccctcccctcaaagatgcttgaattacattcccctcccctcttaagttaaaat 39160294  T

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Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 39208845 - 39208900
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaat 306  Q
    ||||||||||||||||||| ||||||||||||||  || ||| |||| ||||||||    
T  39208845 ctcccctcccctcaaagatgcttgaattacattcccctcccctcttaagttaaaat 39208900  T

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Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 40947438 - 40947501
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||| || |||||||| ||||||||||| ||| || |||  ||||||||||||||||||||    
T  40947438 ctccccttccttcaaagatgcttgaattacactctcctccccttttatgttaaaatatacactc 40947501  T

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Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 44332450 - 44332387
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||| |||||| |||| ||||||||||| |||  | ||| |||||||||||||||||||||    
T  44332450 ctcccctgccctcagagatgcttgaattacactctcatcccctcttatgttaaaatatacactc 44332387  T

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Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 4979172 - 4979130
Alignment:
Q  2 taagaaatataattaattttgtataagaaaatgatattatgag 44  Q
    |||||||||||||||||||||| |||||||  |||||||||||    
T  4979172 taagaaatataattaattttgtttaagaaagagatattatgag 4979130  T

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Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 4997081 - 4997039
Alignment:
Q  2 taagaaatataattaattttgtataagaaaatgatattatgag 44  Q
    |||||||||||||||||||||| |||||||  |||||||||||    
T  4997081 taagaaatataattaattttgtttaagaaagagatattatgag 4997039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 20893210 - 20893272
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||| ||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  20893210 ctcccctcctctcaaagatgcttgaattacaatcccctcccctcttaagttaaaatatacact 20893272  T

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Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 33886403 - 33886465
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||| | |||||  ||||||||||||||  |||||| ||||||||||||| ||||||    
T  33886403 ctcccctcccttaaaagaagcttgaattacattccccttccctcttatgttaaaatctacact 33886465  T

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Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 313
Target Start/End: Original strand, 35657453 - 35657507
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||| ||||||||||||||  || ||| ||||||||||||| ||||||    
T  35657453 ccctcaaagatgcttgaattacattcccctcccctcttatgttaaaatctacact 35657507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 38973212 - 38973150
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||| ||||||| ||  || ||| |||| |||||||||||||||    
T  38973212 ctcccctcccctcaaagatgcttcaattacactcccctcccctcttaagttaaaatatacact 38973150  T

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Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 43656919 - 43657001
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||| ||  |||||||||| ||   ||||  |||| |||||||||||||||||| ||||| | |||||||||||||    
T  43656919 ctcccctcaaatatgtttgaattacactcccattccatcttaagttaaaatatacactctcctccccacttattcaaaacata 43657001  T

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Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 16111233 - 16111172
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||||||| ||||||||||| ||  || | | |||| |||||||||||||||    
T  16111233 tcccctcccctcaaagatgcttgaattacactcccctccactcttaagttaaaatatacact 16111172  T

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Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 26196213 - 26196282
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcc 320  Q
    |||||||||| | |||||||||| ||||||| |||  | | | ||||||||||||||||||||| |||||    
T  26196213 ctcccctcccttgaaagatacttaaattacactctcatcctctcttatgttaaaatatacactcccatcc 26196282  T

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Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 314
Target Start/End: Original strand, 41077506 - 41077563
Alignment:
Q  257 tcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||| |||||| ||||||||||| |||  ||||| |||||||| ||||||||||||    
T  41077506 tccccttaaagattcttgaattacactctcattccctcttatgttgaaatatacactc 41077563  T

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Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 3515537 - 3515477
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||||  ||||||||||  |  || ||| |||||||||||||||||||||    
T  3515537 ccctcccctcaaagatgtttgaattacacccccctcccctcttatgttaaaatatacactc 3515477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 4438035 - 4437983
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||  |||||||||| || ||| ||| |||||||||||||||||||||    
T  4438035 tcaaagatgtttgaattacactcctctcccctcttatgttaaaatatacactc 4437983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 11563628 - 11563712
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||||||||   ||||||||| ||  || ||| ||||||||||||||||||||  | ||||||| || ||||||||||    
T  11563628 cccttccctcaaagatgaatgaattacactcccctaccctcttatgttaaaatatacacttccctcccctcttaatcaaaacata 11563712  T

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Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 12414353 - 12414301
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaata 307  Q
    |||||||||||||||  |||||||||||||| || | | ||||||||||||||    
T  12414353 cctcccctcaaagatgtttgaattacattctcctcctctcttatgttaaaata 12414301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 12426413 - 12426361
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaata 307  Q
    |||||||||||||||  |||||||||||||| || | | ||||||||||||||    
T  12426413 cctcccctcaaagatgtttgaattacattctcctcctctcttatgttaaaata 12426361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 22298298 - 22298254
Alignment:
Q  271 cttgaattacattcttcttcccacttatgttaaaatatacactct 315  Q
    ||||||||||| || ||| ||| ||||||||||||||||||||||    
T  22298298 cttgaattacactcctctcccctcttatgttaaaatatacactct 22298254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32864206 - 32864162
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagt 45  Q
    ||||||||||||||||||||||||| | |||  ||||||||||||    
T  32864206 ttaagaaatataattaattttgtatgacaaagagatattatgagt 32864162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 35658936 - 35658880
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||||||||||||||| |||||||||| ||   | ||| ||||||||||||||||||    
T  35658936 cctcccctcaaagatatttgaattacactcacatcccctcttatgttaaaatataca 35658880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 41521692 - 41521648
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||| | ||||||| |||| ||||||||    
T  41521692 cttatgttaaaatatacactcccctcccctcttatttaaaacata 41521648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 50144115 - 50144032
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||||||||| |||  | ||| ||||||||||||||||||||||| ||||||| |||||||||||||    
T  50144115 cctcccctcaaagatacttgaattacactctcatcccctcttatgttaaaatatacactctcctcccctcttattcaaaacata 50144032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 41321519 - 41321606
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||| || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  41321519 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 41321606  T

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Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 41575180 - 41575263
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||| ||||| | ||||||| |||||||||    
T  41575180 ctcccctcccctcaaagatgcttgaattacactcctcttccctcttatgttaaaatatgcactcccctcccctcttattcaaaa 41575263  T

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Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 19997610 - 19997697
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||| |||||| ||| ||||||||||| || ||| |||||||||||||||||||| |  ||||||| |||||||||||||    
T  19997610 ctcccctccccttaaagatgcttaaattacattctcctcccctcttatgttaaaatatacacttttctcccctcttattcaaaacata 19997697  T

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Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 36604733 - 36604795
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||||||||    
T  36604733 ctcccctcccctcaaagatgcttgaattacactcctcttccctcttatgttaaaatatacact 36604795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 1845866 - 1845953
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| ||||||| |||||||| | ||||||| |||||||||||||    
T  1845866 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaacatacactcccctcccctcttattcaaaacata 1845953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 18407269 - 18407182
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||| ||||||  |||||||||| ||| || ||| |||||||||||||||||| || | ||||||| |||||||||||||    
T  18407269 ctcccctccccttaaagatgtttgaattacactctcctcccctcttatgttaaaatatacattcccctcccctcttattcaaaacata 18407182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 23739884 - 23739797
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||| |||||||| ||||||||||| |   || ||| ||||||||||||||||||||||| ||||||| |||||||||||||    
T  23739884 ctccactcccttcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacactctcctcccctcttattcaaaacata 23739797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 47292309 - 47292238
Alignment:
Q  250 cctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatccc 321  Q
    |||||||||||||||||||| ||||||||||||||  |||||  ||||||||||| ||||||||||| ||||    
T  47292309 cctcccctcccctcaaagatgcttgaattacattccccttccttcttatgttaaactatacactctcctccc 47292238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 4601771 - 4601709
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||| |||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||||    
T  4601771 ctcctctcccctcaaagatgcttgaattacactctccttccctcttatgttaaaatatacact 4601709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 45738006 - 45738068
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||| || ||| ||||||||||||||||||||    
T  45738006 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttatgttaaaatatacact 45738068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 51362551 - 51362467
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||||||||| ||||||||||| | | || |||  |||||||||||||||||||| | ||||||| |||||||||||||    
T  51362551 cccttccctcaaagatgcttgaattacactttcctccccttttatgttaaaatatacactcccctcccctcttattcaaaacata 51362467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 16536378 - 16536441
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||||||||||||||||||||    
T  16536378 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactc 16536441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 52505300 - 52505387
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| |||||||||||  |  || ||| |||| |||| ||||||||||| || |||||| |||||||||||||    
T  52505300 ctcccctcccctcaaagatgcttgaattacacccccctcccctcttaagttagaatatacactcccaccccctcttattcaaaacata 52505387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 337
Target Start/End: Complemental strand, 16537080 - 16537002
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacat 337  Q
    ||||||||||| ||||||||||| |   || ||| |||||||||||||||||||| || ||||||| ||||||||||||    
T  16537080 ccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacactttcctcccctcttattcaaaacat 16537002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 338
Target Start/End: Complemental strand, 29510525 - 29510459
Alignment:
Q  272 ttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| ||  |||||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  29510525 ttgaattacactccccttccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 29510459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 45737311 - 45737381
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatccc 321  Q
    |||| |||||||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||||| ||||    
T  45737311 ctcctctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactctcctccc 45737381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 51611811 - 51611893
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||||||  |||||||||| |  ||||||| |||||||||||||||||||| || ||||||| |||| ||||||||    
T  51611811 ctcctctcaaagatgtttgaattacacttctcttccctcttatgttaaaatatacactttcctcccctcttatttaaaacata 51611893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 831990 - 831930
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccc 322  Q
    |||||||| ||||||||||| || ||| ||| ||||||||||||||||||||||| |||||    
T  831990 tcaaagatgcttgaattacactcatctcccctcttatgttaaaatatacactctcctcccc 831930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 28971529 - 28971423
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaac---atagaaaacatt 347  Q
    |||||||||| ||||||||  ||||||||||||    | ||| ||||||||||||||||||| ||| ||| ||| ||||||||||    |||||||||||    
T  28971529 ctcccctcccgtcaaagatgtttgaattacatttacatcccctcttatgttaaaatatacacgctcctcctctcttattcaaaacttattagaaaacatt 28971430  T
Q  348 ttactcc 354  Q
    |||||||    
T  28971429 ttactcc 28971423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 45195295 - 45195219
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| |||||| |||| | | |||||| ||||||||||||||||||||| | ||||||  |||||||||||||    
T  45195295 tcaaagatgcttgaaatacactgtccttccctcttatgttaaaatatacactcccctccccttttattcaaaacata 45195219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 47233767 - 47233695
Alignment:
Q  266 agatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||||||||||||  |||| | |||||||||||||||||| || | ||||||| |||||||||||||    
T  47233767 agatgcttgaattacattccccttctctcttatgttaaaatatacattcccttcccctcttattcaaaacata 47233695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 8061040 - 8061119
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||| ||||||||||| ||| || | | ||||||||||||||||||||| | | ||||| |||||||||||||    
T  8061040 cccttaaagatgcttgaattacactctcctcctctcttatgttaaaatatacactccccttccctcttattcaaaacata 8061119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 13574227 - 13574168
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||| |||||||||| |||||| |||||| |||||| | ||||||||||||||||||||    
T  13574227 ccctctcctcaaagatgcttgaaatacattattcttctctcttatgttaaaatatacact 13574168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 17109312 - 17109374
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||||||||||| |||||||||| || || || | |||||||||||||||||||||    
T  17109312 ctcccctcccctcaaagatatttgaattacactcctc-tctctcttatgttaaaatatacactc 17109374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 36605464 - 36605381
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||  |||||||||| ||  || ||| |||||||||||||||||||||   | ||||| |||||||||||||    
T  36605464 cctcccctcaaagatgtttgaattacactcccctcccctcttatgttaaaatatacactcattttccctcttattcaaaacata 36605381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 37418844 - 37418903
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatccc 321  Q
    |||||||| |||||||||||||||||||| | ||||||| ||||||||||| ||| ||||    
T  37418844 tcaaagatgcttgaattacattcttcttctctcttatgtgaaaatatacaccctcctccc 37418903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 38011921 - 38011834
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||| |||| |||||| ||||||||||| ||  || | | |||| |||||||||||||||| | ||||||| |||||||||||||    
T  38011921 ctccccttcccttaaagatgcttgaattacactcccctccactcttaagttaaaatatacactcccctcccctcttattcaaaacata 38011834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 42831269 - 42831206
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||| |||||||||||||||||| ||  || | | |||||||||||||||||||||    
T  42831269 ctcccctccccttaaagatacttgaattacactcccctccgctcttatgttaaaatatacactc 42831206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 44645958 - 44645919
Alignment:
Q  295 ttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  44645958 ttatgttaaaatatacactctcatcccctcttattcaaaa 44645919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 45738735 - 45738676
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||| |||||||| ||||||||||| || ||| ||| ||||||||||||||||||||    
T  45738735 ccctcccatcaaagatgcttgaattacactcctctcccctcttatgttaaaatatacact 45738676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 794814 - 794728
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||| || ||||||||  || ||||||| ||| || ||| ||||||||||||||||||||| | ||| ||| |||||||||||||    
T  794814 tccccttccatcaaagatgatttaattacactctcctcccctcttatgttaaaatatacactcccctcctctcttattcaaaacata 794728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 4666890 - 4666968
Alignment:
Q  261 ctcaaagatacttgaattacattcttcttcccacttatgtt-aaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||| ||||||||||| || ||| ||| |||||||| ||||||||||||  | ||||||| |||||||||||||    
T  4666890 ctcaaagatgcttgaattacactcatctcccctcttatgttaaaaatatacacttccctcccctcttattcaaaacata 4666968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 25068331 - 25068393
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||| |||||||||||| ||||||||||| ||| || ||| |||| |||||||||||||||    
T  25068331 ctccccacccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatacact 25068393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 27225683 - 27225744
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||| | |||| ||||||||||| ||| || ||| ||||||||||||||||||||    
T  27225683 tcccctcccctaagagatgcttgaattacactctcctcccctcttatgttaaaatatacact 27225744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31023635 - 31023699
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcctt 70  Q
    ||||||||| |||||||| |||||||||||||  |||||||||     ||||||||||||||||||||||    
T  31023635 ttaagaaatgtaattaatattgtataagaaaaatatattatga-----gttgttttacaaaattgtcctt 31023699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 831878 - 831838
Alignment:
Q  271 cttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  831878 cttgaattacattcttcttccctcttatgttaaaatttaca 831838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 17110077 - 17109998
Alignment:
Q  258 cccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||| ||||||||||| |   || ||| ||||||||||||||||||||||| | ||||| |||| ||||||||    
T  17110077 cccctcaaagatgcttgaattacactaccctcccctcttatgttaaaatatacactctc-ttccctcttatttaaaacata 17109998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 19071721 - 19071781
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||| |||||||||||  |||||||||| ||| || ||| |||||||||||||||||||||    
T  19071721 cccttccctcaaagatgtttgaattacactctcctcccctcttatgttaaaatatacactc 19071781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 19119611 - 19119671
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||| |||||||||||  |||||||||| ||| || ||| |||||||||||||||||||||    
T  19119611 cccttccctcaaagatgtttgaattacactctcctcccctcttatgttaaaatatacactc 19119671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 47233070 - 47233126
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||||||||||||||||||||| ||  || ||  ||||||||||||||||||    
T  47233070 cctcccctcaaagatacttgaattacactcccctcccttcttatgttaaaatataca 47233126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 338
Target Start/End: Complemental strand, 31766026 - 31765983
Alignment:
Q  295 ttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||| | ||||||| |||||||||||||    
T  31766026 ttatgttaaaatatacactcccctcccctcttattcaaaacata 31765983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 42830548 - 42830631
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||  |||||||||| ||  |  ||| |||||||||||||||||| |  | ||||||| |||||||||||||    
T  42830548 cctcccctcaaagatgtttgaattacactccccgcccctcttatgttaaaatatacatttccctcccctcttattcaaaacata 42830631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 52506039 - 52505980
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  52506039 ccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 52505980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 1846604 - 1846546
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacac 312  Q
    |||||||||||||||| ||||||||||| ||  || ||| |||| ||||||||||||||    
T  1846604 ccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacac 1846546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 334
Target Start/End: Complemental strand, 19072421 - 19072343
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||||||||||  |||||||||| ||  || | | ||||| ||||||||||||||| | ||||||| |||||||||    
T  19072421 ctcccctcaaagatgtttgaattacactcccctcctctcttatattaaaatatacactcccctcccctcttattcaaaa 19072343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 334
Target Start/End: Complemental strand, 19120311 - 19120233
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||||||||||  |||||||||| ||  || | | ||||| ||||||||||||||| | ||||||| |||||||||    
T  19120311 ctcccctcaaagatgtttgaattacactcccctcctctcttatattaaaatatacactcccctcccctcttattcaaaa 19120233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 25813032 - 25813090
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  25813032 cctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 25813090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 27930771 - 27930829
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatata 309  Q
    ||||||||| ||||||||| ||||||||||| ||  || ||| ||||||||||||||||    
T  27930771 ctcccctcctctcaaagatgcttgaattacactcccctcccctcttatgttaaaatata 27930829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 41322259 - 41322201
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  41322259 cctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 41322201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 334
Target Start/End: Original strand, 45559114 - 45559192
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    |||| ||||||||| ||||||||||| ||  |||||  |||||||||||||||||| |  | ||||||| |||||||||    
T  45559114 ctccgctcaaagatgcttgaattacactccccttccatcttatgttaaaatatacatttccctcccctcttattcaaaa 45559192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 316
Target Start/End: Original strand, 831293 - 831338
Alignment:
Q  271 cttgaattacattcttcttcccacttatgttaaaatatacactctc 316  Q
    ||||||||||||||  |||||  |||||||||||||||||||||||    
T  831293 cttgaattacattccccttccatcttatgttaaaatatacactctc 831338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3280906 - 3280951
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagtt 46  Q
    ||||||||||||||||||||||| | |||||  |||||||||||||    
T  3280906 ttaagaaatataattaattttgtctgagaaagagatattatgagtt 3280951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 27522005 - 27521945
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||| || |||||| ||||||||||| ||| || ||| ||||| ||||||||||||    
T  27522005 ctcccctccacttaaagatgcttgaattacactctcctcccctcttatattaaaatataca 27521945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 27532637 - 27532557
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacac-tctcatcccctcctattcaaaacata 338  Q
    ||||||||||| ||||||||| | |||  ||  | ||||||||||||||||||| || | ||||||| |||||||||||||    
T  27532637 ccctcaaagatgcttgaattatactctcattttctcttatgttaaaatatacacgtcccctcccctcttattcaaaacata 27532557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 32145589 - 32145526
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcct 69  Q
    ||||||||| |||||||| |||| |  |||||||||||||||||     ||||||||||||||||||||    
T  32145589 ttaagaaatgtaattaatattgtgtgggaaaatgatattatgag-----ttgttttacaaaattgtcct 32145526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 18524431 - 18524321
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaaca---tagaaaacatt 347  Q
    ||||||||||||||||||| ||||||||||||||  || ||| |||||||||||||||| | || | ||||||| ||||||||| |   |||||||||||    
T  18524431 ctcccctcccctcaaagatgcttgaattacattcgcctcccctcttatgttaaaatatatagtcccctcccctcttattcaaaatatattagaaaacatt 18524332  T
Q  348 ttactcccctt 358  Q
    |||||||||||    
T  18524331 ttactcccctt 18524321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 1199812 - 1199725
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  |||||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  1199812 ctcccctcccctcaaagatgcttgaattacactccccttccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 1199725  T

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Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 31477032 - 31476945
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| |||||||||| ||||||||||| ||  || ||| |||||||||||||||||||| |||||||||| |||||||||||||    
T  31477032 ctcccctctcctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactttcatcccctcttattcaaaacata 31476945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 13686689 - 13686606
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||||| ||||||||| ||||||||||| |||  | ||| ||||||||||||||||| ||||||||||||| |||||||||    
T  13686689 ctcccctcctctcaaagatgcttgaattacactctcatcccctcttatgttaaaatataccctctcatcccctcttattcaaaa 13686606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 19408550 - 19408633
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  19408550 cctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 19408633  T

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Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 21639031 - 21639112
Alignment:
Q  257 tcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||||| ||||||||||| ||  || ||| ||||||||||||||||||||||| ||||||| |||||||||||||    
T  21639031 tcccttcaaagatgcttgaattacactccactcccctcttatgttaaaatatacactctcctcccctcttattcaaaacata 21639112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 32020471 - 32020559
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaa--atatacactctcatcccctcctattcaaaacat 337  Q
    ||||||||||||||||||| ||||||||||||||  || ||| |||||||||||  |||||||||| | ||||||| ||||||||||||    
T  32020471 ctcccctcccctcaaagatgcttgaattacattcccctcccctcttatgttaaaatatatacactcccctcccctcttattcaaaacat 32020559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 4877442 - 4877355
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||| ||||||||||  | ||||||||||| ||| || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  4877442 ctcccatcccctcaaatttgcttgaattacactctcctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 4877355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 35751523 - 35751610
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||   | ||| ||||||||||||||||||||| | ||||||| || ||||||||||    
T  35751523 ctcccctcccctcaaagatgcttgaattacactcccttcccctcttatgttaaaatatacactcccctcccctcttaatcaaaacata 35751610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 20541049 - 20540987
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||||||| || ||| |||| |||||||||||||||    
T  20541049 ctcccctcccctcaaagatgcttgaattacattctcctcccctcttaagttaaaatatacact 20540987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 37658141 - 37658055
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||| || ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  37658141 tcccctcccctcaaatatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 37658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 17967826 - 17967913
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttc-ccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||  |||||||| ||||||||||||| ||| || || ||||||||||||||||||||  ||||||||| |||||||||||||    
T  17967826 ctcccctcctatcaaagatgcttgaattacatt-ttcatctcctcttatgttaaaatatacacttccatcccctcttattcaaaacata 17967913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 27979967 - 27979857
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaaca---tagaaaacatt 347  Q
    |||||||||||||||||||  ||||||||||  || ||   | ||||||||||||||||||||| | ||||||| |||||||||||   ||||||| |||    
T  27979967 ctcccctcccctcaaagatgtttgaattacaccctcctcatctcttatgttaaaatatacactcccctcccctcttattcaaaacatattagaaaaaatt 27979868  T
Q  348 ttactcccctt 358  Q
    | |||||||||    
T  27979867 tcactcccctt 27979857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 20570891 - 20570808
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||||||| ||||||| ||| ||| || ||| |||||||||||||||||||||   ||||||| |||||||||||||    
T  20570891 cctctcctcaaagatgcttgaatcacactctcctcccctcttatgttaaaatatacactccactcccctcttattcaaaacata 20570808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 24625562 - 24625475
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| |||||||||||  |  || ||| |||| |||| ||||||||||| || |||||| |||||||||||||    
T  24625562 ctcccctcccctcaaagatgcttgaattacacccccctcccctcttaagttagaatatacactcccaccccctcttattcaaaacata 24625475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 4876717 - 4876787
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatccc 321  Q
    ||||||||||||||||||||||||||| ||| |||  | ||| |||||||||||||||||| |||| ||||    
T  4876717 ctcccctcccctcaaagatacttgaataacactctcatcccctcttatgttaaaatatacattctcctccc 4876787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 334
Target Start/End: Original strand, 8007073 - 8007151
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    |||||||||||||| |||||||||||   |||| ||| ||||||||||||||||||||||  ||| ||| |||||||||    
T  8007073 ctcccctcaaagatgcttgaattacaccgttctcccctcttatgttaaaatatacactcttctcctctcttattcaaaa 8007151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 17781216 - 17781143
Alignment:
Q  250 cctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctc 324  Q
    |||||||||||||||||||| ||||||||||| |  ||| ||| ||||||||||||||||| ||||| |||||||    
T  17781216 cctcccctcccctcaaagatgcttgaattacact-atctcccctcttatgttaaaatatacgctctcctcccctc 17781143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 8573406 - 8573353
Alignment:
Q  261 ctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||| ||||||||||| ||| |||||| |||||||||||||||||||||    
T  8573406 ctcaaagatgcttgaattacactctccttccctcttatgttaaaatatacactc 8573353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 13685975 - 13686040
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctc 316  Q
    |||||||| |||||||||| ||||||||||| |||  | ||| |||||||||||||||||||||||    
T  13685975 ctcccctctcctcaaagatccttgaattacactctcatcccctcttatgttaaaatatacactctc 13686040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 15145141 - 15145076
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatccc 321  Q
    |||||||||||||| ||||||||||| ||| || ||||||||| |||||||||||| |||| ||||    
T  15145141 ctcccctcaaagatgcttgaattacactctcctccccacttatattaaaatatacaatctcctccc 15145076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 6047992 - 6048079
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||  ||||||||  |||||||||| |   || ||| ||||||||||||||||||||||| ||||||| |||||||| ||||    
T  6047992 ctcccctcctatcaaagatgtttgaattacacttccctcccctcttatgttaaaatatacactctcctcccctcttattcaaaccata 6048079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 9017666 - 9017741
Alignment:
Q  263 caaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||| ||||||||||| ||  || ||| ||||||||||||||||||||  | ||||||| |||||||||||||    
T  9017666 caaagatgcttgaattacactcccctcccctcttatgttaaaatatacacttccctcccctcttattcaaaacata 9017741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 37334655 - 37334568
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| |||||||| ||||||||||| |   || ||  |||| |||||||||||||||| | ||||||| |||||||||||||    
T  37334655 ctcccctcccttcaaagatgcttgaattacacttccctcccttcttaagttaaaatatacactcccctcccctcttattcaaaacata 37334568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 40027567 - 40027484
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||| ||||||||||| ||  |||||||||| ||| ||| ||| ||||||||||||||||  | ||||||| |||||||||    
T  40027567 ctccccttccctcaaagatgctaaaattacattcctctcccctcttgtgttaaaatatacacttccctcccctcttattcaaaa 40027484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 4055476 - 4055414
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||| |||||||||||| ||||||||||| ||| || ||| |||| |||||||||||||||    
T  4055476 ctccccacccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatacact 4055414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 14594080 - 14594138
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||||  |||||||||| || ||| ||| ||||||||||||||||||||    
T  14594080 cctcccctcaaagatgtttgaattacaatcatctcccctcttatgttaaaatatacact 14594138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 20691121 - 20691183
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  20691121 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 20691183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 36737516 - 36737454
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||| |||||| ||||||||||| ||  || ||| ||||||||||||||||||||    
T  36737516 ctcccctccccttaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 36737454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 36762121 - 36762183
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| ||||| ||||||||||||||    
T  36762121 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttattttaaaatatacact 36762183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 37333910 - 37333972
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  37333910 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 37333972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 37657388 - 37657450
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  37657388 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 37657450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 40026939 - 40027005
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatccc 321  Q
    |||||| |||||||| |||||||| ||||| |||  || |||||||||||||||||||| |||||||    
T  40026939 cctcccttcaaagatgcttgaattgcattcctctctcctcttatgttaaaatatacactttcatccc 40027005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 40957477 - 40957395
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| ||||| ||||||||||| ||  || ||| |||| ||||||||||||| |||| ||| ||| |||||||||||||    
T  40957477 ctcccctctaagatgcttgaattacactcacctcccctcttaggttaaaatatacaatctcctcctctcttattcaaaacata 40957395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33700 - 33764
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcctt 70  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||     ||||||||||||||||||||||    
T  33700 ttaagaaatataattaattttgtgtgggaaaaagatattatga-----gttgttttacaaaattgtcctt 33764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 20183377 - 20183454
Alignment:
Q  261 ctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||| ||||||||||| ||  || ||  ||||||||||||||||||||| | | ||||| |||||||||||||    
T  20183377 ctcaaagatgcttgaattacactcccctcccttcttatgttaaaatatacactccccttccctcttattcaaaacata 20183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 36742129 - 36742190
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||||||| ||||||||| | |||  | ||| ||||||||||||||||||||    
T  36742129 tcccctcccctcaaagatgcttgaattaaactctcatcccctcttatgttaaaatatacact 36742190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 36742606 - 36742561
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacatag 339  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||    
T  36742606 cttatgttaaaatatacactcccctcccctcttattcaaaacatag 36742561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 27979242 - 27979298
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||||||||| ||||||||||| ||  || ||| ||||||||||||||||||    
T  27979242 cctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatataca 27979298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 31850727 - 31850667
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||||||||||||| ||||||||||| |||    ||| ||||||||||||||||||    
T  31850727 ctcccctcccctcaaagatgcttgaattacactctctacccctcttatgttaaaatataca 31850667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 32458569 - 32458493
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| ||||||||||| ||| || |||  |||| |||||||||||||||   ||||||| |||||||||||||    
T  32458569 tcaaagatgcttgaattacactctcctccccttttatattaaaatatacactcctctcccctcttattcaaaacata 32458493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 12548483 - 12548436
Alignment:
Q  264 aaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||||||||||||||||| || ||||| | ||||||||||||||||||    
T  12548483 aaagatacttgaattacactcatcttctctcttatgttaaaatataca 12548436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15268319 - 15268366
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgt 48  Q
    ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  15268319 ttaagaaatgtaattaattttgtatgggaaaaagatattatgagttgt 15268366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 20540307 - 20540394
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||| || |||||||| ||||||||||| | |  | |||  ||| |||||||||||||||||| ||||||  |||||||||||||    
T  20540307 ctccccttccttcaaagatccttgaattacactatcttccccttttaagttaaaatatacactctcctccccttttattcaaaacata 20540394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 22731127 - 22731064
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||||||| ||| |||||||||| ||  || ||  |||||||||||||||||||||    
T  22731127 ctcccctcccctcaaaaatatttgaattacactcccctcccttcttatgttaaaatatacactc 22731064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 24624827 - 24624886
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  24624827 ccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 24624886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 8007191 - 8007233
Alignment:
Q  271 cttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||| ||||||| ||||||||||||| ||||||    
T  8007191 cttgaattacattcctcttccctcttatgttaaaatctacact 8007233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 9119615 - 9119553
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||| ||||||    
T  9119615 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatgtacact 9119553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 17781108 - 17781051
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||    
T  17781108 cctcccctcaaagatgcttgaattacactc-cctcccctcttatgttaaaatatacact 17781051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 25538113 - 25538083
Alignment:
Q  164 gtattgtaaaacgacatataatttagaacaa 194  Q
    |||||||||||||||||||||||||||||||    
T  25538113 gtattgtaaaacgacatataatttagaacaa 25538083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 6029464 - 6029521
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||||||||||||||| ||||||||||| |||  | | | ||||||||||||||||||    
T  6029464 ccctcccctcaaagatgcttgaattacactctcatcctctcttatgttaaaatataca 6029521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 20570135 - 20570208
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctc 324  Q
    |||||||||| ||| |||| ||||||||||| ||  || | | ||||||||||||||||||||| | |||||||    
T  20570135 ctcccctcccttcagagatgcttgaattacactcccctcctctcttatgttaaaatatacactcccctcccctc 20570208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40275226 - 40275290
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcctt 70  Q
    ||||||||| ||||||||||||| | |||||  ||||||||||     ||||||||||||||||||||||    
T  40275226 ttaagaaatgtaattaattttgtgtgagaaagagatattatga-----gttgttttacaaaattgtcctt 40275290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 6031416 - 6031329
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttccca-cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||||||||||||  |||||||||| | ||| ||||  |||||||||||||||| ||||   ||||||| |||||||||||||    
T  6031416 ctcctctcccctcaaagatgtttgaattacact-ttcatcccttcttatgttaaaatatatactccactcccctcttattcaaaacata 6031329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8883432 - 8883369
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcct 69  Q
    |||||||||||||||||| |||| || ||||  |||||||||||     ||||||||||||||||||||    
T  8883432 ttaagaaatataattaatattgtgtaggaaagagatattatgag-----ttgttttacaaaattgtcct 8883369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 14594806 - 14594750
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||| |||||||||| |||||||||||  | ||| ||| ||||||||||||||||||    
T  14594806 cctctcctcaaagatgcttgaattacacacctctcccctcttatgttaaaatataca 14594750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 15175223 - 15175299
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| ||||||||||| |   || ||| ||||||||||||||||||||  | ||||||| | |||||||||||    
T  15175223 tcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacacttccctcccctctttttcaaaacata 15175299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24806990 - 24806929
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaatt 64  Q
    ||||||||||||||||||||||| | | |||| |||||||| |  || ||||||||||||||||    
T  24806990 ttaagaaatataattaattttgtgtgacaaaaagatattatca--tgagttgttttacaaaatt 24806929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 30782763 - 30782807
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||  || ||||||| |||||||||||||    
T  30782763 cttatgttaaaatatacacgttcctcccctcttattcaaaacata 30782807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 38497355 - 38497395
Alignment:
Q  271 cttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||||| |||||| ||| ||||||||||||||||||    
T  38497355 cttgaattacactcttctcccctcttatgttaaaatataca 38497395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 38498093 - 38498007
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaa---atatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||| ||||| ||||||||||| ||| || ||| |||||||||||   ||||| || | | ||||||| |||||||||||||    
T  38498093 cctcccctcgaagatgcttgaattacactctcctcccctcttatgttaaaaatatataaacccccttcccctcttattcaaaacata 38498007  T

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Target: scaffold0289 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 3415 - 3502
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| |||||||||||  || || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  3415 ctcccctcccctcaaagatgcttgaattacacactcctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 3502  T

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Target: scaffold0289; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 4112 - 4053
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||||| ||||||||||| ||  || ||  ||||||||||||||||||||    
T  4112 ccctcccctcaaagatgcttgaattacactcccctcccatcttatgttaaaatatacact 4053  T

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Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 25527736 - 25527823
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||| || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  25527736 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 25527823  T

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Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 12026265 - 12026178
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||| ||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  12026265 ctcccctcctctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 12026178  T

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Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 12693852 - 12693939
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| |  |||  || ||||||||||||||||||||| | ||||||| |||||||||||||    
T  12693852 ctcccctcccctcaaagatgcttgaattacacttctctctcctcttatgttaaaatatacactcccctcccctcttattcaaaacata 12693939  T

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Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 30462180 - 30462097
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||| ||||| |||||||  ||| ||| ||||| ||||||||||||||||||||||||| |||||||| ||||    
T  30462180 cctcccctcaaagatgcttgagttacatttctctcccctcttatattaaaatatacactctcatcccctcttattcaaagcata 30462097  T

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Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 33950232 - 33950319
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||| ||| ||| || ||| ||||| ||||||||||||||| | ||||||| |||||||||||||    
T  33950232 ctcccctcccctcaaagatgcttgaatcacactctcctcccctcttattttaaaatatacactcccctcccctcttattcaaaacata 33950319  T

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Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 5443016 - 5443104
Alignment:
Q  250 cctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||||||||||||||| |   || ||  |||| |||||||||||||||| | ||||||| |||||||||||||    
T  5443016 cctcccctcccctcaaagatacttgaattacacttccctcccttcttaagttaaaatatacactcccctcccctcttattcaaaacata 5443104  T

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Target: chr6; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 11522806 - 11522889
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||    
T  11522806 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaa 11522889  T

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Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 12033185 - 12033098
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||| ||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  12033185 ctcccctccgctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 12033098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 14313917 - 14313830
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||| ||||||||||||| ||||||||||| ||  || ||| |||||||||||||||||| || | ||||||| |||||||||||||    
T  14313917 ctcccatcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacaatcccctcccctcttattcaaaacata 14313830  T

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Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 14873024 - 14873111
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| ||||||||||||| || | ||||||| |||||||||||||    
T  14873024 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacattcccctcccctcttattcaaaacata 14873111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 10702282 - 10702364
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||| ||||||||||| |   || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  10702282 ctcccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 10702364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 14306798 - 14306860
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||| |||||||| ||||||||||||||| || ||| ||||||||||||||||||||    
T  14306798 ctcccctcccttcaaagatgcttgaattacattctcctcccctcttatgttaaaatatacact 14306860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 14313198 - 14313260
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| |||||||||||||| ||| |||  |||||||||||||||||||    
T  14313198 ctcccctcccctcaaagatgcttgaattacattcctctccccttttatgttaaaatatacact 14313260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 7127725 - 7127638
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || |||  ||| |||||||| ||||||| | ||||||| |||||||||||||    
T  7127725 ctcccctcccctcaaagatgcttgaattacactcccctccccttttaagttaaaatgtacactcccctcccctcttattcaaaacata 7127638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 17307212 - 17307275
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||||||||||  || ||||||| || ||||||| |||||||||||||||||||||    
T  17307212 ctcccctcccctcaaagatgtttaaattacactcctcttccctcttatgttaaaatatacactc 17307275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 25577269 - 25577182
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||  ||||||||||| ||   | ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  25577269 ctcccctcccctcaaagaagcttgaattacactcccatcccctcttaagttaaaatatacactcacctcccctcttattcaaaacata 25577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 5443758 - 5443696
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  |||||| |||| |||||||||||||||    
T  5443758 ctcccctcccctcaaagatgcttgaattacactccccttccctcttaagttaaaatatacact 5443696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 338
Target Start/End: Original strand, 6936402 - 6936468
Alignment:
Q  272 ttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| ||| || ||| ||||||||||||||||||||||||||||||  |||| ||||||||    
T  6936402 ttgaattacactctcctcccctcttatgttaaaatatacactctcatcccctattatttaaaacata 6936468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 12025523 - 12025585
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  |||||| |||| |||||||||||||||    
T  12025523 ctcccctcccctcaaagatgcttgaattacactccccttccctcttaagttaaaatatacact 12025585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6087048 - 6087112
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcctt 70  Q
    ||||||||||||||||||||||||| ||||||  |||||||||     ||||||||||||||||||||||    
T  6087048 ttaagaaatataattaattttgtatgagaaaaatatattatga-----gttgttttacaaaattgtcctt 6087112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 17312123 - 17312060
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaaca---tagaaaacattttactcc 354  Q
    |||||||||||||||| ||||| |||||||| |||||||||||   ||||||||||||||||||    
T  17312123 cttatgttaaaatataaactcttatcccctcttattcaaaacatattagaaaacattttactcc 17312060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 9240864 - 9240952
Alignment:
Q  250 cctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||  |||||||||| ||  || ||| |||| |||||||||||||||  | ||||||| |||||||| ||||    
T  9240864 cctcccctcccctcaaagatgtttgaattacactcccctcccctcttaagttaaaatatacacttccctcccctcttattcaaagcata 9240952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 31881850 - 31881934
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||| |||||||| ||||||||||| ||  || |||  |||||||||||||||||||| | || |||| |||||||||||||    
T  31881850 ccctcccttcaaagatgcttgaattacactcccctccccttttatgttaaaatatacactcccctctcctcttattcaaaacata 31881934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 32003888 - 32003844
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||    
T  32003888 cttatgttaaaatatacactctcctcccctcttattcaaaacata 32003844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 32521846 - 32521902
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||||||||||||||||||||| || | | ||| ||||||||||||||||||    
T  32521846 cctcccctcaaagatacttgaattacactcctttcccctcttatgttaaaatataca 32521902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 188501 - 188414
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| | |||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | || |||| |||||||||||||    
T  188501 ctcccctccctttaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctctcctcttattcaaaacata 188414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 334
Target Start/End: Complemental strand, 3767810 - 3767731
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    |||||||||||||||  |||||||||| || ||| ||| |||| ||||||||||||||||   ||||||| |||||||||    
T  3767810 cctcccctcaaagatgtttgaattacactcatctcccctcttaagttaaaatatacactcctctcccctcttattcaaaa 3767731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 325
Target Start/End: Original strand, 4125886 - 4125957
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcc 325  Q
    |||||| ||||||||| ||| ||||||| ||| || ||| ||||||||||||||||||||| | ||||||||    
T  4125886 ccctcctctcaaagatgcttaaattacactctcctcccctcttatgttaaaatatacactcccctcccctcc 4125957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 7448958 - 7448895
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||||||| || ||||||||||| || | | ||| |||||||||||||||||||||    
T  7448958 ctcccctcccctcaaaaatgcttgaattacactcctttcccctcttatgttaaaatatacactc 7448895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 21801953 - 21802032
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||| ||||||||||| ||  || |   ||||||||||||||||||||| | ||||||| |||||||||||||    
T  21801953 ccctcaaagatgcttgaattacactcccctccattcttatgttaaaatatacactcccctcccctcttattcaaaacata 21802032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 22342103 - 22342166
Alignment:
Q  250 cctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||| || ||||||||||| || | | ||| ||||||||||||||||||||    
T  22342103 cctcccctcccctcaaatatgcttgaattacactcatatcccctcttatgttaaaatatacact 22342166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 335
Target Start/End: Original strand, 24619919 - 24619998
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaac 335  Q
    ||||||| |||||| ||||||||||| |  ||| ||||||||||||||||||||||||  | |||||||  |||||||||    
T  24619919 ctccccttaaagatgcttgaattacactagtctccccacttatgttaaaatatacacttccctcccctctgattcaaaac 24619998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 187780 - 187838
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||| ||||||||||| ||  |||||| |||| |||||||||||||||    
T  187780 cctcccctcaaagatgcttgaattacactcaccttccctcttaagttaaaatatacact 187838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 9241607 - 9241545
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  9241607 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 9241545  T

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Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 11523545 - 11523483
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  11523545 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 11523483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 34250772 - 34250714
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||| |||||||| ||||||||||| |||||| ||| |||||| |||||||||||||    
T  34250772 cctcccttcaaagatgcttgaattacactcttctcccctcttatgctaaaatatacact 34250714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 34709985 - 34709923
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  34709985 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 34709923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 12766957 - 12767026
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctc 324  Q
    |||||||| |||||| ||||||||||| ||  || ||| | ||||||||||||||||||||| |||||||    
T  12766957 cctccccttaaagatgcttgaattacactcccctcccctcctatgttaaaatatacactctcctcccctc 12767026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 16326128 - 16326051
Alignment:
Q  261 ctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| |||||||||| ||  || ||| ||||| ||||||||||||||| | ||||||| |||||||| ||||    
T  16326128 ctcaaagatatttgaattacactcacctcccctcttatattaaaatatacactcccctcccctcttattcaaaccata 16326051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 16349526 - 16349449
Alignment:
Q  261 ctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| |||||||||| ||  || ||| ||||| ||||||||||||||| | ||||||| |||||||| ||||    
T  16349526 ctcaaagatatttgaattacactcacctcccctcttatattaaaatatacactcccctcccctcttattcaaaccata 16349449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 7448243 - 7448295
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||||| ||||||||||| ||| |||| | ||||||||||||||||||    
T  7448243 ccctcaaagatgcttgaattacactctccttctctcttatgttaaaatataca 7448295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 34250072 - 34250155
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||| ||||||  |||||||||| || ||| |||  |||||||||||||||||| | | ||||||| |||||||||||||    
T  34250072 ccctccccttaaagatgtttgaattacactcatctcccctattatgttaaaatatacac-cccctcccctcttattcaaaacata 34250155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 2522675 - 2522738
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||| || || ||||||||||| ||| || ||| ||||| |||||||||||||||    
T  2522675 ctcccctcccctctaatatgcttgaattacactctcctcccctcttatattaaaatatacactc 2522738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 325
Target Start/End: Original strand, 4100524 - 4100595
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcc 325  Q
    |||||| ||||||||| ||| ||||||| ||  || ||| ||||||||||||||||||||| | ||||||||    
T  4100524 ccctcctctcaaagatgcttaaattacactcccctcccctcttatgttaaaatatacactcccctcccctcc 4100595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 21802668 - 21802609
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||| || |||||| ||||||||||| ||| || ||| |||||||||||||||||||||    
T  21802668 cctcctctaaaagatgcttgaattacactctcctcccctcttatgttaaaatatacactc 21802609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 22022342 - 22022279
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||| |||||| |||| ||||||||||| |||  | ||| |||||||||||||||||||||    
T  22022342 ctcccctgccctcagagatgcttgaattacactctcatcccctcttatgttaaaatatacactc 22022279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 357
Target Start/End: Original strand, 28023567 - 28023677
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaa-----tatacactctcatcccctcctattcaaaacatagaaaaca 345  Q
    |||||||||| ||||||||  |||||||||| ||  || ||| ||||| ||||||     |||||| |||||||||||| |||||||||||| ||||||     
T  28023567 ctcccctcccttcaaagatgtttgaattacactcccctcccctcttatcttaaaagagaatatacattctcatcccctcttattcaaaacat-gaaaact 28023665  T
Q  346 ttttactcccct 357  Q
    ||| ||||||||    
T  28023666 tttcactcccct 28023677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 10702994 - 10702940
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||| ||||||||||| |  ||| ||| ||||||||||||||||||||    
T  10702994 ccctcaaagatgcttgaattacacttctctcccctcttatgttaaaatatacact 10702940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 14873765 - 14873703
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||| ||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  14873765 ctcccatcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 14873703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 338
Target Start/End: Complemental strand, 34794577 - 34794503
Alignment:
Q  264 aaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||| ||||||||||| ||  || ||| |||||||||||||||||||| || |||| || | |||||||||||    
T  34794577 aaagatgcttgaattacactcccctcccctcttatgttaaaatatacactttcctcccatctttttcaaaacata 34794503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30510800 - 30510864
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcctt 70  Q
    ||||||||| |||||||||||||||  ||||  ||||||||||     ||||||||||||||||||||||    
T  30510800 ttaagaaatgtaattaattttgtatgggaaagagatattatga-----gttgttttacaaaattgtcctt 30510864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 6936504 - 6936544
Alignment:
Q  271 cttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||||||||||||||||| ||| ||||||||||||| ||||    
T  6936504 cttgaattacattcttctcccctcttatgttaaaatttaca 6936544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 12767047 - 12767107
Alignment:
Q  253 cccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||| | |||  ||||||||||||||| || ||| ||||||||||||| ||||||    
T  12767047 cccctcccctaagagaagcttgaattacattctcctcccctcttatgttaaaatttacact 12767107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 25528483 - 25528423
Alignment:
Q  253 cccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||| ||||||||||| ||  || | | |||| |||||||||||||||    
T  25528483 cccctcccctcaaagatgcttgaattacactcccctcctctcttaagttaaaatatacact 25528423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 32113788 - 32113828
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||||||||||||||||| | ||||||| |||||||||    
T  32113788 cttatgttaaaatatacactcccctcccctcttattcaaaa 32113828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 34280706 - 34280662
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||||||||||||| | ||||||| |||||||||||||    
T  34280706 cttaagttaaaatatacactcccctcccctcttattcaaaacata 34280662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 6233171 - 6233084
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||||||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  6233171 ctcccctcccctcaaagatacttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 6233084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 47030550 - 47030463
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||| || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  47030550 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 47030463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 338
Target Start/End: Original strand, 46095414 - 46095500
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||| ||||||||||| ||| || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  46095414 tcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 46095500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 50824644 - 50824722
Alignment:
Q  260 cctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| ||||||||||| ||  |||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  50824644 cctcaaagatgcttgaattacactccacttctctcttatgttaaaatatacactctcatcccctcttattcaaaacata 50824722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 616199 - 616112
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||||||||||| ||||||||||| ||  || | | |||| |||||||||||||||||||||||||| |||||||||||||    
T  616199 ctccactcccctcaaagatgcttgaattacactcccctcctctcttaagttaaaatatacactctcatcccctcttattcaaaacata 616112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 722047 - 721984
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||||||||||||||||||| || ||| ||| |||||||||||||||||||||    
T  722047 ctcccctcccctcaaagatacttgaattacactcctctcccctcttatgttaaaatatacactc 721984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 8193058 - 8192971
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  8193058 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 8192971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 35667351 - 35667264
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| |||||||| ||||||||||| ||  || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  35667351 ctcccctcccatcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 35667264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 35667634 - 35667547
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| | | || ||| ||||||||||||||||||||| | ||||| | |||||||||||||    
T  35667634 ctcccctcccctcaaagatgcttgaattacactttcctcccctcttatgttaaaatatacactcccctccccacttattcaaaacata 35667547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 37708791 - 37708869
Alignment:
Q  260 cctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| ||||||||||| || ||| ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  37708791 cctcaaagatgcttgaattacactcctctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 37708869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 754874 - 754938
Alignment:
Q  250 cctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||||||||||| ||||||||||| || ||| ||| |||||||||||||||||||||    
T  754874 cctcccctcccctcaaagatgcttgaattacactcctctcccctcttatgttaaaatatacactc 754938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 13395195 - 13395283
Alignment:
Q  250 cctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||  | ||||||| |||||||||||||    
T  13395195 cctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttccctcccctcttattcaaaacata 13395283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 13771725 - 13771835
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaaca---tagaaaacatt 347  Q
    ||||||||||||||||||| ||||||||||| | |  | ||| ||||||||||||||||||||| | ||| ||| |||||||||||   ||||||| |||    
T  13771725 ctcccctcccctcaaagatgcttgaattacactttcatcccctcttatgttaaaatatacactcccctcctctcttattcaaaacatattagaaaatatt 13771824  T
Q  348 ttactcccctt 358  Q
    | |||||||||    
T  13771825 tcactcccctt 13771835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 17722757 - 17722844
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| | |||||| ||||||||||| ||  || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  17722757 ctcccctccctttaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 17722844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 9784599 - 9784680
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||| || |||||||||||||||| ||||  ||||||||||||||||||||||| ||| ||| |||||||||||||    
T  9784599 ctcctctcaaaaatgcttgaattacattctttttcct-cttatgttaaaatatacactctcctcctctcttattcaaaacata 9784680  T

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Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 28464210 - 28464295
Alignment:
Q  253 cccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||| ||||||||||| |   || ||| ||||||||||||||||||||  ||||||||  |||||||||||||    
T  28464210 cccctcccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacacttccatccccttttattcaaaacata 28464295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 13482193 - 13482253
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||||||| ||||||||||| ||| || ||| |||||||||||||||||||||    
T  13482193 ccctcccctcaaagatgcttgaattacactctcctcccctcttatgttaaaatatacactc 13482253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 19314078 - 19313994
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||| ||||||||||| ||  || ||  |||||||||||||||||||||   ||||||| |||||||||||||    
T  19314078 ccctcccctcaaagatgcttgaattacactcccctcccgtcttatgttaaaatatacactcctctcccctcttattcaaaacata 19313994  T

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Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 35667817 - 35667737
Alignment:
Q  258 cccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||| |  |||||| |||||||||||||    
T  35667817 cccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactccccccccctcttattcaaaacata 35667737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 796390 - 796473
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    |||||||||| |||||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||    
T  796390 ctcccctcccttcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaa 796473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 4950663 - 4950576
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||| ||| ||  ||  |  ||||||||||||||||||||| | ||||||| |||||||||||||    
T  4950663 ctcccctcccctcaaagatgcttgaatcacactcccctctcttcttatgttaaaatatacactcccctcccctcttattcaaaacata 4950576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 7166146 - 7166059
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| |   || | | |||| |||||||||||||||| | ||||||| |||||||||||||    
T  7166146 ctcccctcccctcaaagatgcttgaattacacttccctcctctcttaagttaaaatatacactcccctcccctcttattcaaaacata 7166059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 16960212 - 16960299
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| | |||||||| ||||||||||| |   || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  16960212 ctcccctctcttcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 16960299  T

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Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 19313352 - 19313415
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||||||| ||||||||||| |||  | ||| |||||||||||||||||||||    
T  19313352 ctcccctcccctcaaagatgcttgaattacactctcatcccctcttatgttaaaatatacactc 19313415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 23308813 - 23308892
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||| ||||||||||| ||  || ||| |||| ||||||||||||||| || ||||||| |||||||||||||    
T  23308813 ccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactttcctcccctcttattcaaaacata 23308892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 26705737 - 26705650
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||| |||| |||||||| ||||||||||| ||  || | | ||||||||||||||||||||| | ||||||| |||||||||||||    
T  26705737 ctcccttcccttcaaagatgcttgaattacactcccctcctctcttatgttaaaatatacactcccctcccctcttattcaaaacata 26705650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 41919976 - 41919913
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||| |||||||||||||| ||||||||||| |||||| | | |||||||||||||||||||||    
T  41919976 ctcctctcccctcaaagatgcttgaattacactcttctcctctcttatgttaaaatatacactc 41919913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 7797681 - 7797619
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||||||  || ||  ||||||||||||||||||||    
T  7797681 ctcccctcccctcaaagatgcttgaattacattcccctcccttcttatgttaaaatatacact 7797619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 33047296 - 33047210
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||| |||| |  |||||||||| ||  || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  33047296 tcccctccccttaaagttgtttgaattacactcccctcccctcttatgttaaaatatacactcccttcccctcttattcaaaacata 33047210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 25010123 - 25010062
Alignment:
Q  253 cccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||| |||||||| ||||||||||| ||| || ||| |||||||||||||||||||||    
T  25010123 cccctcccttcaaagatgcttgaattacactctcctcccctcttatgttaaaatatacactc 25010062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 26705041 - 26705102
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacac 312  Q
    |||||||| ||||||||||||||||||||||||   || ||| |||||||||||||||||||    
T  26705041 ctcccctctcctcaaagatacttgaattacatttccctcccctcttatgttaaaatatacac 26705102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 721332 - 721416
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||| ||||||||||| ||  || ||| ||||| ||||||||||||||  | | ||||| |||||||||||||    
T  721332 ccctcccctcaaagatgcttgaattacactcccctcccctcttatattaaaatatacacttcccttccctcttattcaaaacata 721416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 18362762 - 18362702
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||||||| ||||||||||| ||| || ||| ||||| |||||||||||||||    
T  18362762 ccctcccctcaaagatgcttgaattacactctcctaccctcttatattaaaatatacactc 18362702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 30192527 - 30192603
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||  |||||||||| ||| || ||| ||||||||||||||||||||  | ||||||| |||||||||||||    
T  30192527 tcaaagatgtttgaattacactctcctcccctcttatgttaaaatatacacttccctcccctcttattcaaaacata 30192603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 33032170 - 33032254
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||| ||||||||||| |  ||| |||  ||||||||||||||||||||   ||||||  |||||||||||||    
T  33032170 ccctcccctcaaagatgcttgaattacacttctctcccctattatgttaaaatatacactcctctccccttttattcaaaacata 33032254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 36600164 - 36600224
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||||||| ||||||||||| ||| || ||| ||||| |||||||||||||||    
T  36600164 ccctcccctcaaagatgcttgaattacactctcctaccctcttatattaaaatatacactc 36600224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 8139060 - 8138973
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||| || | |||||| ||||||||||| ||  || ||| | ||||||||||||||||||| | ||||||| |||||||||||||    
T  8139060 ctccccttcctttaaagatgcttgaattacaatcccctcccctcatatgttaaaatatacactcccctcccctcttattcaaaacata 8138973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 10155510 - 10155597
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||  |||||||||| ||| || ||   ||| |||||||||||||||  | ||||||| |||||||||||||    
T  10155510 ctcccctcccctcaaagatgtttgaattacactctcctccctttttaagttaaaatatacacttccctcccctcttattcaaaacata 10155597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 23722116 - 23722057
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||    
T  23722116 ccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 23722057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 36898167 - 36898104
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||||||||||||||||||| ||  ||  ||  ||||||||||||||||||||    
T  36898167 ctcccctcccctcaaagatacttgaattacactcccctctccttttatgttaaaatatacactc 36898104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 37423795 - 37423874
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||| ||| ||||||| ||  || ||| ||||||||||||||||||||| |  |||||| |||||||||||||    
T  37423795 ccctcaaagatgcttaaattacactcccctcccctcttatgttaaaatatacactccccacccctcttattcaaaacata 37423874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 55068850 - 55068913
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||| ||||||||| ||||||||||| ||  || ||| |||||||||||||||||||||    
T  55068850 ctcccctcctctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactc 55068913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 7165403 - 7165465
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  7165403 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 7165465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 13392819 - 13392757
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  13392819 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 13392757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 13395958 - 13395896
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  13395958 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 13395896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 17730248 - 17730186
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||| ||  ||  |||||||||||||||||||    
T  17730248 ctcccctcccctcaaagatgcttgaattacactctcctctccttttatgttaaaatatacact 17730186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 21037916 - 21037854
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||| | |||  ||||||||||||| |||||||| ||||||||||||| ||||||    
T  21037916 ctcccctcccctaagagaagcttgaattacatttttcttccctcttatgttaaaatctacact 21037854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 32449004 - 32448946
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||| |||||||||||||||||||||| ||  || ||| ||||||||||||||||||||    
T  32449004 cctctcctcaaagatacttgaattacactccactcccctcttatgttaaaatatacact 32448946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 44664713 - 44664783
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatccc 321  Q
    |||||||||| ||||||||| |||||||||| |  ||| ||| |||||||||||||||||| |||| ||||    
T  44664713 ctcccctcccatcaaagatatttgaattacacttctctcccctcttatgttaaaatatacattctcctccc 44664783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 47029824 - 47029886
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  47029824 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 47029886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 49702388 - 49702470
Alignment:
Q  256 ctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| ||||| ||||||||||| |  ||| ||| ||||| |||||||||||| |||  ||||||| |||||||||||||    
T  49702388 ctcccctctaagatgcttgaattacacttctctcccctcttatattaaaatatacaatcttctcccctcttattcaaaacata 49702470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 56310125 - 56310048
Alignment:
Q  260 cctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| ||||||||||| ||| || | | ||||||||||||||||||| | | ||||||| |||||||||||||    
T  56310125 cctcaaagatgcttgaattacactctcctcctctcttatgttaaaatatacac-cccctcccctcttattcaaaacata 56310048  T

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Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23153891 - 23153827
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcctt 70  Q
    ||||||||||||||||||||||| ||| |||  |||||||||||     |||||||||||||||||||||    
T  23153891 ttaagaaatataattaattttgtgtaaaaaagagatattatgag-----ttgttttacaaaattgtcctt 23153827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 755591 - 755507
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||| ||||||||| | ||  || ||| ||||| ||||||||||||||  | | ||||| |||||||||||||    
T  755591 ccctcccctcaaagatgcttgaattatactcccctcccctcttatattaaaatatacacttcccttccctcttattcaaaacata 755507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 20545086 - 20545026
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||||||||||||| |||| ||||||||||| ||  || ||| ||||||||||||||||||    
T  20545086 ctcccctcccctcagagatgcttgaattacactcccctcccctcttatgttaaaatataca 20545026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 36897467 - 36897548
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||||||||||||||| ||| ||||||| || ||  |||  ||| |||||||||||||||| | ||||||| |||||||||    
T  36897467 ctcccctcccctcaaagatgcttaaattacactcctc--cccttttaagttaaaatatacactcccctcccctcttattcaaaa 36897548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 37424503 - 37424451
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||| ||||||||||||||  || ||| |||||||||||||||||||||    
T  37424503 tcaaagatgcttgaattacattcccctcccctcttatgttaaaatatacactc 37424451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 23265849 - 23265790
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||||| ||||||||||| |||  | ||| |||| |||||||||||||||    
T  23265849 ccctcccctcaaagatgcttgaattacactctcttcccctcttaagttaaaatatacact 23265790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 23269175 - 23269238
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||| |||||||| ||||||||||| ||  || ||| |||| ||||||||||||||||    
T  23269175 ctcccctcccttcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactc 23269238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 32448282 - 32448368
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||| |||||||| ||| |||||||  || || ||| |||||||||||||||||| |||| ||||||| |||| ||||||||    
T  32448282 ctcctctcccttcaaagatgcttaaattacac-ctcctcccctcttatgttaaaatatacattctcctcccctcttatttaaaacata 32448368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 37709634 - 37709571
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||| |||||||||||||| ||||||||||||||  || ||| || ||||||||||||| ||||    
T  37709634 ctcctctcccctcaaagatgcttgaattacattcccctcccctctcatgttaaaatataaactc 37709571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 334
Target Start/End: Complemental strand, 44665249 - 44665170
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||||||||| | ||||||||||  ||  || |||  |||||||||||||||||||| | ||||||| |||||||||    
T  44665249 cctcccctcaaagttgcttgaattacgctcccctccccttttatgttaaaatatacactcccctcccctcttattcaaaa 44665170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 48372426 - 48372485
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||||||  |||||||||||||  || ||| |||||||||||||||| ||||    
T  48372426 cctcccctcaaagatgtttgaattacattcgcctcccctcttatgttaaaatatatactc 48372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 49621414 - 49621328
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| ||||| || |||||||||||| |  || ||| ||||| ||||||||||||||  | ||||||| |||||||||||||    
T  49621414 ctcccctcccttcaaaaatgcttgaattacatccccct-ccctcttattttaaaatatacacttccctcccctcttattcaaaacata 49621328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 51019661 - 51019720
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||| | |||| ||||||||||| ||| || ||| ||||||||||||||||||||    
T  51019661 ccctcccctaagagatgcttgaattacactctcctcccctcttatgttaaaatatacact 51019720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 615445 - 615503
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||| ||||||||||| ||  |||| | |||| |||||||||||||||    
T  615445 cctcccctcaaagatgcttgaattacactccccttcactcttaagttaaaatatacact 615503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 6232357 - 6232415
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatata 309  Q
    |||||||||| |||||||| ||||||||||| ||  || ||| ||||||||||||||||    
T  6232357 ctcccctcccttcaaagatgcttgaattacactcccctcccctcttatgttaaaatata 6232415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 12250681 - 12250743
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||| ||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  12250681 ctcccttcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 12250743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 25008272 - 25008314
Alignment:
Q  296 tatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| | ||||||| |||||||||||||    
T  25008272 tatgttaaaatatacactcccttcccctcttattcaaaacata 25008314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 29429767 - 29429705
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||| |||| | |||| ||||||||||| ||| |||| | ||||||||||||||||||||    
T  29429767 ctccccttccctaagagatgcttgaattacactctccttctctcttatgttaaaatatacact 29429705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 35667449 - 35667387
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||| ||||||||||||| ||||||||||| |   || ||| ||||||||||||||||||||    
T  35667449 ctcccttcccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacact 35667387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 314
Target Start/End: Complemental strand, 45847834 - 45847772
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||| ||| |||||| ||||||||||| || ||| | | |||||||||||||||||||||    
T  45847834 tcccctcaccttaaagatgcttgaattacaatcctctcctctcttatgttaaaatatacactc 45847772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3086100 - 3086164
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcctt 70  Q
    ||||||||||||||||||||||| |  ||||  ||||||||||     ||||||||||||||||||||||    
T  3086100 ttaagaaatataattaattttgtgtgggaaatagatattatga-----gttgttttacaaaattgtcctt 3086164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 16960940 - 16960879
Alignment:
Q  253 cccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||||||| ||||||||| | ||  ||  || |||||||||||||||||||||    
T  16960940 cccctcccctcaaagattcttgaattatactcccctctcctcttatgttaaaatatacactc 16960879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26855555 - 26855491
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcctt 70  Q
    ||||||||||||||||||||||| |  ||||  |||||||||||     |||||||||||||||||||||    
T  26855555 ttaagaaatataattaattttgtgtgggaaatagatattatgag-----ttgttttacaaaattgtcctt 26855491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 29979071 - 29979128
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctc 316  Q
    ||||||||||| ||||||||||||||  |||  | || ||||||||||||||||||||    
T  29979071 ccctcaaagatgcttgaattacattcccctttgctctaatgttaaaatatacactctc 29979128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 35853565 - 35853626
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacac 312  Q
    |||||||||  |||||||||||||||||||| |   || ||| |||||||||||||||||||    
T  35853565 ctcccctccgttcaaagatacttgaattacacttccctcccctcttatgttaaaatatacac 35853626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 54315289 - 54315225
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcctt 70  Q
    ||||||||||||||||||||||| |  ||||  |||||||||||     |||||||||||||||||||||    
T  54315289 ttaagaaatataattaattttgtgtgggaaagagatattatgag-----ttgttttacaaaattgtcctt 54315225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 7796964 - 7797040
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| ||||||||||| ||  || ||| | ||||||||||||||||||  | || |||| |||||||||||||    
T  7796964 tcaaagatgcttgaattacactcccctcccctcctatgttaaaatatacacttccctctcctcttattcaaaacata 7797040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21634804 - 21634741
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcct 69  Q
    ||||||||| |||||||| |||| || ||||| |||||||||||     ||||||||||||||||||||    
T  21634804 ttaagaaatgtaattaatattgtgtaggaaaaagatattatgag-----ttgttttacaaaattgtcct 21634741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 33046565 - 33046629
Alignment:
Q  249 tcctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||| ||||||||||||||  |||||||||| |  ||| ||| ||||||||||||| ||||||    
T  33046565 tcctcctctcccctcaaagatgattgaattacacttctctcccctcttatgttaaaatctacact 33046629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 35665961 - 35666021
Alignment:
Q  253 cccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||| ||||||||| | |  ||| | | ||||||||||||||||||||    
T  35665961 cccctcccctcaaagatgcttgaattatacttctctcctctcttatgttaaaatatacact 35666021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41858949 - 41858886
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcct 69  Q
    ||||||||| |||||||| |||| || ||||| |||||||||||     ||||||||||||||||||||    
T  41858949 ttaagaaatgtaattaatattgtgtaggaaaaagatattatgag-----ttgttttacaaaattgtcct 41858886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 45847185 - 45847229
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||| || | ||||||| |||||||||||||    
T  45847185 cttatgttaaaatatacaatcccctcccctcttattcaaaacata 45847229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 27070 - 26983
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacac-tctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| || ||| ||| ||||||||||||||||||| |||| ||||||| |||||||||||||    
T  27070 ctcccctcccctcaaagatgcttgaattacactcatctcccctcttatgttaaaatatacacttctc-tcccctcttattcaaaacata 26983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 19714 - 19627
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  19714 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 19627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 317285 - 317372
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  317285 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 317372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 5228706 - 5228619
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| |||||||| ||||||||||| ||| || |||  |||||||||||||||||||| | ||||||| |||||||||||||    
T  5228706 ctcccctcccttcaaagatgcttgaattacactctcctccccttttatgttaaaatatacactcccctcccctcttattcaaaacata 5228619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 22263770 - 22263853
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||||| ||||||||| |||||||||||||||||| | | ||||||||||||||||||||  | ||||||| |||||||||    
T  22263770 ctcccctcctctcaaagatgcttgaattacattcttctcctctcttatgttaaaatatacacttccctcccctcttattcaaaa 22263853  T

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Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 25266 - 25350
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  25266 ccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 25350  T

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Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 3340780 - 3340863
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctca-tcccctcctattcaaaa 334  Q
    ||||||||||||||||||| |||||||||||||   |||||| |||||||||||||||||||| ||| ||||||| |||||||||    
T  3340780 ctcccctcccctcaaagatgcttgaattacatttcccttccctcttatgttaaaatatacact-tcattcccctcttattcaaaa 3340863  T

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Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 27144188 - 27144272
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaac 335  Q
    ||||||||||||||||||| ||| ||||||| ||  || ||| ||||||||||||||||||||| | ||||||| ||||||||||    
T  27144188 ctcccctcccctcaaagatgcttaaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaac 27144272  T

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Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 34999195 - 34999279
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||| |||||||||||||||||| ||  || ||| ||||||||||||||||||||| | ||||||| ||||||| |||||    
T  34999195 ccctcccctaaaagatacttgaattacactcccctcccctcttatgttaaaatatacactcccctcccctcttattcaacacata 34999279  T

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Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 40343769 - 40343849
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaac 335  Q
    ||||||||||||||| ||||||||||| ||  |||||| |||| |||||||||||||||| | ||||||| ||||||||||    
T  40343769 cctcccctcaaagatgcttgaattacactccccttccctcttaagttaaaatatacactcccctcccctcttattcaaaac 40343849  T

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Target: chr7; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 8122634 - 8122721
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||| ||  |||  | ||||||||||||||||||||  | ||||||| |||||||||||||    
T  8122634 ctcccctcccctcaaagatgcttgaattacactccccttatctcttatgttaaaatatacacttccctcccctcttattcaaaacata 8122721  T

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Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 335
Target Start/End: Complemental strand, 32867961 - 32867886
Alignment:
Q  260 cctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaac 335  Q
    |||||||||| ||||||||||| || ||| ||| ||||||||||||||||||||| | ||||||| ||||||||||    
T  32867961 cctcaaagatgcttgaattacactcctctcccctcttatgttaaaatatacactcccctcccctcttattcaaaac 32867886  T

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Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 36847839 - 36847926
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||||| ||||||||||   |  || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  36847839 ctcccctcccctcaaagatgcttgaattacgaccccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 36847926  T

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Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 29823338 - 29823420
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    ||||||||||||||||||  |||||||||| ||| || ||| |||| |||||||||||||||| | ||||||| |||||||||    
T  29823338 tcccctcccctcaaagatgtttgaattacactctcctcccctcttaagttaaaatatacactcccctcccctcttattcaaaa 29823420  T

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Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 11639903 - 11639968
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctc 316  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||||||||||||||||||||||    
T  11639903 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactctc 11639968  T

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Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 40400912 - 40400996
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||||||||| ||||||||||| |||  | ||| |||||||||||||||||||||   ||||||| |||||||||||||    
T  40400912 cccttccctcaaagatgcttgaattacactctcatcccctcttatgttaaaatatacactcctctcccctcttattcaaaacata 40400996  T

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Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 2146043 - 2146130
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| |||||||| ||||||||||| ||  || ||| |||| |||||||||||||||||| || |||| |||||||| ||||    
T  2146043 ctcccctcccttcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactctcctctcctcttattcaaatcata 2146130  T

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Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 6184659 - 6184745
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||  |||||||||| ||| || ||| |||| |||||||||||||||| | ||| ||| |||||||||||||    
T  6184659 ctcccctcccctcaaagatgtttgaattacactctcct-ccctcttaagttaaaatatacactcccctccactcttattcaaaacata 6184745  T

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Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 14078371 - 14078450
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||| ||||||||| | |||  | ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  14078371 ccctcaaagatgcttgaattaaactctcttcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 14078450  T

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Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 14388399 - 14388478
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||| ||||||||| | |||  | ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  14388399 ccctcaaagatgcttgaattaaactctcttcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 14388478  T

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Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 32867251 - 32867314
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||| |||||||| ||||||||||||||  || ||| |||||||||||||||||||||    
T  32867251 ctcccctcccttcaaagatgcttgaattacattcccctcccctcttatgttaaaatatacactc 32867314  T

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Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 42813638 - 42813559
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||| ||||||||||| ||  || | | |||||||||||||||||||| || ||||||| |||||||||||||    
T  42813638 ccctcaaagatgcttgaattacactcccctcctctcttatgttaaaatatacactttcctcccctcttattcaaaacata 42813559  T

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Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 48982606 - 48982519
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| ||||||| || ||||||||||| |   || ||| ||||||||||||||||||||| | ||||||| |||||||||||||    
T  48982606 ctcccctctcctcaaatatgcttgaattacacttccctcccctcttatgttaaaatatacactcccctcccctcttattcaaaacata 48982519  T

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Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 2146942 - 2146880
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  |||||| |||| |||||||||||||||    
T  2146942 ctcccctcccctcaaagatgcttgaattacactccccttccctcttaagttaaaatatacact 2146880  T

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Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 250 - 358
Target Start/End: Complemental strand, 2935829 - 2935718
Alignment:
Q  250 cctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacac-tctcatcccctcctattcaaaacat---agaaaaca 345  Q
    |||||||| ||||||||||| ||||||||||| ||   | ||| ||||||||||||||||||| |||| ||||||| ||||||||||||   |||||||     
T  2935829 cctccccttccctcaaagatgcttgaattacactcccttcccctcttatgttaaaatatacacttctc-tcccctcttattcaaaacatatgagaaaact 2935731  T
Q  346 ttttactcccctt 358  Q
    ||| |||||||||    
T  2935730 tttcactcccctt 2935718  T

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Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 27619704 - 27619638
Alignment:
Q  248 ctcctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||| ||||||||||| ||||||||||| ||  || ||| |||||||||||||||||||||    
T  27619704 ctcctccccttccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactc 27619638  T

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Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 38790080 - 38790142
Alignment:
Q  252 tcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||||||||| ||||||||||| ||  || ||| |||||||||||||||||||||    
T  38790080 tcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactc 38790142  T

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Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 19156139 - 19156056
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||||||||  |||||||||| || ||| ||| ||||||||||||||||||||  | ||||||| |||| ||||||||    
T  19156139 cctctcctcaaagatgtttgaattacactcatctcccctcttatgttaaaatatacacttccctcccctcttattgaaaacata 19156056  T

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Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 20755538 - 20755455
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||||||||  |||||||||| || ||| ||| ||||||||||||||||||||  | ||||||| |||| ||||||||    
T  20755538 cctctcctcaaagatgtttgaattacactcatctcccctcttatgttaaaatatacacttccctcccctcttattgaaaacata 20755455  T

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Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 23742726 - 23742639
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||| ||||| ||||||||||| || |||   | |||||||||||||||||| ||   ||||||| |||||||||||||    
T  23742726 ctcccctcccctctaagatgcttgaattacactcatctcatctcttatgttaaaatatacaatcatctcccctcttattcaaaacata 23742639  T

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Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 31220805 - 31220892
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| |||||||| ||||||||||| |||||| ||  ||||| |||||||||||| |  | ||| ||| |||||||||||||    
T  31220805 ctcccctcccttcaaagatgcttgaattacactcttctcccttcttatattaaaatatacaattccctcctctcttattcaaaacata 31220892  T

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Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 38670751 - 38670664
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| |||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||  | ||||||| | |||||||||||    
T  38670751 ctcccctctcctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactaccctcccctctttttcaaaacata 38670664  T

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Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 318025 - 317963
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  318025 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 317963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 6185400 - 6185338
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  6185400 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 6185338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 6191916 - 6191854
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  6191916 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 6191854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 25606931 - 25606993
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||| ||  || ||| |||| |||||||||||||||    
T  25606931 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 25606993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 36848565 - 36848503
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||| ||| |||||| ||||||||||| ||||||  || ||||||||||||||||||||    
T  36848565 ctcccctctccttaaagatgcttgaattacactcttctctcctcttatgttaaaatatacact 36848503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 554009 - 553945
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcctt 70  Q
    ||||||||||||||||||||||||| |||||   ||||||||||     |||||||||||||||||||||    
T  554009 ttaagaaatataattaattttgtatgagaaataaatattatgag-----ttgttttacaaaattgtcctt 553945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 314
Target Start/End: Complemental strand, 20261643 - 20261586
Alignment:
Q  257 tcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||||| ||||||||||| |||  | ||| |||||||||||||||||||||    
T  20261643 tcccctcaaagatgcttgaattacactctcatcccctcttatgttaaaatatacactc 20261586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 29615526 - 29615583
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    |||| ||||||||||| ||||||||||| ||| || ||| ||||||||||||||||||    
T  29615526 cccttccctcaaagatgcttgaattacactctcctcccctcttatgttaaaatataca 29615583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 42813029 - 42813090
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacac 312  Q
    ||||| || |||||||||| ||||||||||| | | |||||| |||||||||||||||||||    
T  42813029 ctcccatctcctcaaagatgcttgaattacactttccttccctcttatgttaaaatatacac 42813090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 338
Target Start/End: Original strand, 19332419 - 19332467
Alignment:
Q  290 cccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||||||| || |||| || |||||||||||||    
T  19332419 cccacttatgttaaaatatacactttcctcccatcttattcaaaacata 19332467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 29736138 - 29736198
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatataca 311  Q
    ||||||||| || |||||| ||||||||||| ||  |||||| ||||||||||||||||||    
T  29736138 ctcccctcctcttaaagatgcttgaattacactccacttccctcttatgttaaaatataca 29736198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 36890139 - 36890067
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    |||||||| ||||||||||| |||||| ||| ||| |||||| |||||||||||  |||||||  ||||||||    
T  36890139 tcaaagatgcttgaattacactcttctcccctcttctgttaatatatacactcttttcccctctcattcaaaa 36890067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 45823005 - 45823068
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcct 69  Q
    |||||||||||||||||| |||| |||||||  ||||||||||     |||||||||||||||||||||    
T  45823005 ttaagaaatataattaatattgtgtaagaaagagatattatga-----gttgttttacaaaattgtcct 45823068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 3341500 - 3341445
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||| ||||||||||| ||| ||  || |||||||||||||||||||||    
T  3341500 ccctcaaagatgcttgaattacactctcctctcctcttatgttaaaatatacactc 3341445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 8535501 - 8535414
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| ||||||||  |||||||||| ||  || |||  ||||||||||||||| ||||   ||||||| |||||||||||||    
T  8535501 ctcccctcccgtcaaagatgtttgaattacactcccctccccttttatgttaaaatatatactccactcccctcttattcaaaacata 8535414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 14753940 - 14753881
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||| |||||||||||||||||||| ||  ||  || |||||||||||||||||||||    
T  14753940 cctcccttcaaagatacttgaattacactccactctcctcttatgttaaaatatacactc 14753881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 16425344 - 16425431
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| |||||||   |||||||||| || ||| ||| ||||||||||||||||||||  | |||  || |||||||||||||    
T  16425344 ctcccctcccatcaaagaagtttgaattacactcctctcccctcttatgttaaaatatacacttccctccattcttattcaaaacata 16425431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 337
Target Start/End: Original strand, 20261014 - 20261097
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacat 337  Q
    ||||| |||||||||| || |||||||| |   || ||| ||||||||||||||||||||  | ||||||| ||||||||||||    
T  20261014 ccctctcctcaaagatgctggaattacacttccctcccctcttatgttaaaatatacacttccctcccctcttattcaaaacat 20261097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 22711649 - 22711704
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||| ||||| ||||| ||| || ||| |||||||||||||||||||||    
T  22711649 ccctcaaagatgcttgatttacactctcctcccctcttatgttaaaatatacactc 22711704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 24679946 - 24679891
Alignment:
Q  260 cctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactct 315  Q
    ||||||||||  ||||||||||||  ||| ||| ||||||||||||||||||||||    
T  24679946 cctcaaagatgtttgaattacatttctctcccctcttatgttaaaatatacactct 24679891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 25607671 - 25607592
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||||  |||||||||| ||  || ||| |||| |||||||||||||||| | ||||||| |||||||||||||    
T  25607671 cccttaaagatgtttgaattacactcccctcccctcttaagttaaaatatacactcccctcccctcttattcaaaacata 25607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27131363 - 27131410
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgt 48  Q
    ||||||||||||||||||||||| || ||||  |||||||||||||||    
T  27131363 ttaagaaatataattaattttgtgtaggaaagagatattatgagttgt 27131410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 32388211 - 32388128
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| |||||||||| ||||||||||| ||  || ||| ||||||||||||||||||||  | |||| || | |||||||||||    
T  32388211 cctctcctcaaagatgcttgaattacactccactcccctcttatgttaaaatatacacttccctcccatctttttcaaaacata 32388128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 40401615 - 40401556
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||| |||||||| ||||||||||| ||  || ||| |||||||||||||||||||||    
T  40401615 cctcccttcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactc 40401556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 46011187 - 46011124
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||| |||||||||||||| ||||||||||| ||  |||| | ||||||||||||||| |||||    
T  46011187 ctcctctcccctcaaagatgcttgaattacactccccttctctcttatgttaaaatatgcactc 46011124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 10412623 - 10412561
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||| |||| ||| || ||||||||||| ||| || ||| ||||||||||||||||||||    
T  10412623 ctccccttcccttaaatatgcttgaattacactctcctcccctcttatgttaaaatatacact 10412561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 19435360 - 19435278
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaaca 336  Q
    |||||| |||||||||  |||||||||| || ||| | | ||||||||| |||||||||| |  ||||||| |||||||||||    
T  19435360 ccctcctctcaaagatgtttgaattacactcctctccactcttatgttataatatacacttttctcccctcttattcaaaaca 19435278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 38670002 - 38670064
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||| ||| |||||| ||||||||||| ||| || ||| |||| |||||||||||||||    
T  38670002 ctcccctctccttaaagatgcttgaattacactctcctcccctcttaagttaaaatatacact 38670064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 11641045 - 11640960
Alignment:
Q  253 cccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||  || ||||||| ||  || |||  ||||||||| ||||||||| |  ||||||| |||||||||||||    
T  11641045 cccctcccctcaaagatggttaaattacactcccctccccttttatgttaatatatacacttttctcccctcttattcaaaacata 11640960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 48872731 - 48872657
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||| ||||||||||| || ||||||  |  |||||||||||||||| | | ||||||| |||||||||||||    
T  48872731 tcaaagatgcttgaattacactcctcttccttc--atgttaaaatatacacacccctcccctcttattcaaaacata 48872657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10439246 - 10439309
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcct 69  Q
    ||||||||| |||||||| |||| || ||||| ||||||||||     |||||||||||||||||||||    
T  10439246 ttaagaaatgtaattaatattgtgtaggaaaaagatattatga-----gttgttttacaaaattgtcct 10439309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10452956 - 10453019
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaatgatattatgagttgtgttgttttacaaaattgtcct 69  Q
    ||||||||| |||||||| |||| || ||||| ||||||||||     |||||||||||||||||||||    
T  10452956 ttaagaaatgtaattaatattgtgtaggaaaaagatattatga-----gttgttttacaaaattgtcct 10453019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 23728464 - 23728424
Alignment:
Q  294 cttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    |||||||||||||||||||| |||||||||  |||||||||    
T  23728464 cttatgttaaaatatacactttcatccccttttattcaaaa 23728424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 23742622 - 23742562
Alignment:
Q  253 cccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||| |||  |||||||||||||||||| ||| |||||  |||||| ||||||    
T  23742622 cccctcccctcagagaagcttgaattacattcttctcccctcttataataaaatctacact 23742562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 38987762 - 38987822
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||| ||||||||| ||||||||| | ||  || ||| |||||||||||||||||||||    
T  38987762 ccctcctctcaaagatgcttgaattaaactcccctcccctcttatgttaaaatatacactc 38987822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 40189126 - 40189074
Alignment:
Q  257 tcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatata 309  Q
    |||| |||||||| ||||||||||| ||||||  || ||||||||||||||||    
T  40189126 tcccttcaaagatgcttgaattacagtcttctctcctcttatgttaaaatata 40189074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 46010457 - 46010521
Alignment:
Q  251 ctcccctcccctcaaagatacttgaat-tacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||| |||||| ||||||  |||| || |||| || |||||||||||||||||||||    
T  46010457 ctcccctccccttaaagatgcttgaaactacactcctctttcctcttatgttaaaatatacactc 46010521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 733 - 820
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||| ||||||||||||| ||||||||||| ||  || | | |||| |||||||||||||||| | ||||||| |||||||||||||    
T  733 ctcccatcccctcaaagatgcttgaattacactcccctccactcttaagttaaaatatacactcccctcccctcttattcaaaacata 820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 33409 - 33350
Alignment:
Q  254 ccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||||||||||||||||||||| ||  |||||| |||| |||||||||||||||    
T  33409 ccctcccctcaaagatacttgaattacactccccttccctcttaagttaaaatatacact 33350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 352004 - 351917
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||| ||||||| |||||| ||| |||||||||| ||| | | |||||||||||||||||||| |  ||||||| |||||||||||||    
T  352004 ctcctctccccttaaagatgcttaaattacattcctctcctctcttatgttaaaatatacacttttctcccctcttattcaaaacata 351917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 351296 - 351337
Alignment:
Q  272 ttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    |||||||||| |||||||| | ||||||||||||||||||||    
T  351296 ttgaattacaatcttcttctctcttatgttaaaatatacact 351337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 10981 - 11062
Alignment:
Q  257 tcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||| ||||| ||||| | |||| ||| |||||||||||| |||||||| | ||||||  |||||||||||||    
T  10981 tcccctcaaagatgcttgatttacacttttctcccctcttatgttaaaacatacactcccctcccctattattcaaaacata 11062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 421995 - 421910
Alignment:
Q  253 cccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||||||||||| ||||||||||| ||   | ||| |||||||| |||||||||||  | ||||||| |||||||||||||    
T  421995 cccctcccctcaaagatgcttgaattacactcccttcccctcttatgtttaaatatacacttccctcccctcttattcaaaacata 421910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 14056 - 14143
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||| |||||||   |||||||||| || ||| ||| ||||||||||||||||||||  | |||  || |||||||||||||    
T  14056 ctcccctcccatcaaagaagtttgaattacactcctctcccctcttatgttaaaatatacacttccctccattcttattcaaaacata 14143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 421154 - 421217
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||| ||||||||||||||  |||||||||| ||  || ||| |||||||||||||||||||||    
T  421154 ctccactcccctcaaagatgtttgaattacactcccctcccctcttatgttaaaatatacactc 421217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 12927 - 12840
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcc-cacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||||||  |||||||||| ||| ||||| | |||||||||||||||||| || | | ||||| |||||||||||||    
T  12927 ctcccctcccctcaaagatgtttgaattacactct-cttcctctcttatgttaaaatatacattccccttccctcttattcaaaacata 12840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 12197 - 12259
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||| || |||||||| |||||||||||||| ||| ||| ||||||||||||||| ||||    
T  12197 ctccccttccttcaaagatgcttgaattacattcctctcccctcttatgttaaaatatgcact 12259  T

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Target: scaffold0368 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 11325 - 11262
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||||| |||||||||||||||||| ||  || | | |||||||||||||||||||||    
T  11325 ctcccctccccttaaagatacttgaattacactcccctccgctcttatgttaaaatatacactc 11262  T

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Target: scaffold0368; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 10604 - 10687
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    |||||||||||||||  |||||||||| ||  |  ||| |||||||||||||||||| |  | ||||||| |||||||||||||    
T  10604 cctcccctcaaagatgtttgaattacactccccgcccctcttatgttaaaatatacatttccctcccctcttattcaaaacata 10687  T

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Target: scaffold0460 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 13463 - 13525
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| | ||||||||| ||| || ||| |||| |||||||||||||||    
T  13463 ctcccctcccctcaaagatgcatgaattacactctcctcccctcttaagttaaaatatacact 13525  T

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Target: scaffold0037 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 100021 - 100075
Alignment:
Q  262 tcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctc 316  Q
    |||||||||||||||||||| |  ||| ||| |||||||||||||||||||||||    
T  100021 tcaaagatacttgaattacacttctctcccctcttatgttaaaatatacactctc 100075  T

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Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 134083 - 134041
Alignment:
Q  4 agaaatataattaattttgtataagaaaatgatattatgagtt 46  Q
    |||||||||||||||||||||| |||||| |||||||||||||    
T  134083 agaaatataattaattttgtatgagaaaaagatattatgagtt 134041  T

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Target: scaffold1192 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1192
Description:

Target: scaffold1192; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 167 - 254
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaacata 338  Q
    ||||||||| || ||||||  |||||||||| ||  || ||| ||||||||||||||||||||  |  |||||| |||||||||||||    
T  167 ctcccctcctcttaaagatgtttgaattacagtcccctcccctcttatgttaaaatatacacttcccacccctcttattcaaaacata 254  T

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Target: scaffold0971 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0971
Description:

Target: scaffold0971; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 3107 - 3169
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    |||||||||| ||||| |||||||||||||||||  | |||| || ||||||||||||||||||    
T  3107 ctcccctcccgtcaaatatacttgaattacattc-ccctccccctcatgttaaaatatacactc 3169  T

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Target: scaffold0361 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 16492 - 16575
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactctcatcccctcctattcaaaa 334  Q
    |||||||||| | |||||| ||||||||||| ||  || ||  |||||||||||||||||||||   ||||||| |||||||||    
T  16492 ctcccctccctttaaagatgcttgaattacactcccctcccatcttatgttaaaatatacactcctctcccctcttattcaaaa 16575  T

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Target: scaffold0189 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 11304 - 11359
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||||||||| ||||||||||| | | || ||| |||||||||||||||||||||    
T  11304 ccctcaaagatgcttgaattacactttcctcccctcttatgttaaaatatacactc 11359  T

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Target: scaffold0068 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 59271 - 59330
Alignment:
Q  255 cctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactc 314  Q
    ||||| || |||||| ||||||||||| ||| || ||| |||||||||||||||||||||    
T  59271 cctcctctaaaagatgcttgaattacactctcctcccctcttatgttaaaatatacactc 59330  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 34382 - 34320
Alignment:
Q  251 ctcccctcccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacact 313  Q
    ||||||||||||||||||| ||||||||||  ||  || ||| |||| |||||||||||||||    
T  34382 ctcccctcccctcaaagatgcttgaattacgctcccctcccctcttaagttaaaatatacact 34320  T

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Target: scaffold0187 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10336 - 10383
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaat-gatattatgagttgt 48  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  10336 ttaagaaatataattaattttatat-agaaaatagatattatgagttgt 10383  T

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Target: scaffold0187; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20664 - 20711
Alignment:
Q  1 ttaagaaatataattaattttgtataagaaaat-gatattatgagttgt 48  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  20664 ttaagaaatataattaattttatat-agaaaatagatattatgagttgt 20711  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 25942 - 25887
Alignment:
Q  259 ccctcaaagatacttgaattacattcttcttcccacttatgttaaaatatacactct 315  Q
    ||||||||||| || ||||||||||| ||| | | ||||||||||||||||||||||    
T  25942 ccctcaaagatgct-gaattacattcatctcctctcttatgttaaaatatacactct 25887  T

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