View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3029-Insertion-2 (Length: 1045)

Name: NF3029-Insertion-2
Description: NF3029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3029-Insertion-2
NF3029-Insertion-2
[»] chr8 (38 HSPs)
chr8 (8-1045)||(38874255-38875301)
chr8 (321-463)||(12361113-12361256)
chr8 (338-460)||(10114429-10114550)
chr8 (338-463)||(28769345-28769470)
chr8 (392-460)||(27028824-27028892)
chr8 (331-421)||(4558730-4558820)
chr8 (340-421)||(1470904-1470985)
chr8 (376-460)||(8062501-8062585)
chr8 (340-419)||(31705025-31705105)
chr8 (405-461)||(35220731-35220787)
chr8 (338-417)||(787158-787237)
chr8 (401-460)||(43717946-43718005)
chr8 (433-555)||(7008633-7008753)
chr8 (339-421)||(31884534-31884616)
chr8 (363-421)||(34770856-34770914)
chr8 (323-429)||(35869761-35869867)
chr8 (364-460)||(2482830-2482924)
chr8 (364-421)||(6509351-6509408)
chr8 (338-463)||(11795031-11795156)
chr8 (320-393)||(14949809-14949882)
chr8 (329-418)||(42597331-42597420)
chr8 (381-425)||(7514560-7514604)
chr8 (376-463)||(30013195-30013282)
chr8 (401-460)||(30251463-30251522)
chr8 (338-421)||(41620339-41620422)
chr8 (379-421)||(9834837-9834879)
chr8 (571-617)||(14926893-14926939)
chr8 (409-467)||(21653091-21653149)
chr8 (364-414)||(29262929-29262979)
chr8 (571-609)||(42215219-42215257)
chr8 (366-427)||(6864501-6864562)
chr8 (375-420)||(7645954-7645999)
chr8 (570-615)||(9700113-9700158)
chr8 (386-451)||(9956832-9956897)
chr8 (366-451)||(11376670-11376755)
chr8 (343-460)||(31862437-31862554)
chr8 (340-421)||(34080314-34080395)
chr8 (405-458)||(44236834-44236887)
[»] chr5 (49 HSPs)
chr5 (338-460)||(39105403-39105525)
chr5 (338-539)||(32172592-32172792)
chr5 (338-460)||(9202757-9202879)
chr5 (323-416)||(32059642-32059734)
chr5 (363-444)||(12425535-12425616)
chr5 (339-467)||(36796708-36796836)
chr5 (401-460)||(4014433-4014492)
chr5 (363-488)||(10272413-10272537)
chr5 (352-421)||(14295459-14295528)
chr5 (329-422)||(18704083-18704175)
chr5 (338-421)||(26209461-26209543)
chr5 (346-459)||(37588370-37588483)
chr5 (386-454)||(28776980-28777048)
chr5 (329-422)||(35135713-35135802)
chr5 (344-423)||(9703286-9703365)
chr5 (338-421)||(38047903-38047986)
chr5 (386-460)||(2568645-2568719)
chr5 (380-446)||(7319387-7319453)
chr5 (376-446)||(35553211-35553281)
chr5 (405-491)||(41052874-41052959)
chr5 (395-460)||(7984965-7985030)
chr5 (570-615)||(9174928-9174973)
chr5 (378-427)||(12975326-12975375)
chr5 (346-459)||(37526209-37526322)
chr5 (339-459)||(37690646-37690767)
chr5 (380-460)||(1619071-1619150)
chr5 (392-460)||(41981874-41981942)
chr5 (381-460)||(6587116-6587195)
chr5 (433-552)||(11297114-11297232)
chr5 (349-420)||(12595789-12595860)
chr5 (338-421)||(16889674-16889757)
chr5 (556-603)||(31723903-31723950)
chr5 (496-551)||(36326104-36326159)
chr5 (380-463)||(41957457-41957540)
chr5 (570-600)||(1899265-1899295)
chr5 (393-435)||(4620187-4620229)
chr5 (405-463)||(7319014-7319072)
chr5 (513-551)||(9174929-9174967)
chr5 (406-460)||(10639960-10640014)
chr5 (338-424)||(15402874-15402960)
chr5 (401-451)||(24030419-24030469)
chr5 (345-399)||(32969187-32969241)
chr5 (583-621)||(34736434-34736472)
chr5 (570-615)||(8651265-8651310)
chr5 (453-538)||(11457152-11457236)
chr5 (512-553)||(16937800-16937841)
chr5 (376-421)||(34205216-34205261)
chr5 (392-457)||(40119880-40119945)
chr5 (363-424)||(40120084-40120145)
[»] chr7 (46 HSPs)
chr7 (363-460)||(40688995-40689092)
chr7 (320-446)||(27548184-27548310)
chr7 (337-515)||(48157075-48157252)
chr7 (379-475)||(38010694-38010790)
chr7 (380-456)||(47177617-47177693)
chr7 (364-451)||(12110325-12110412)
chr7 (338-460)||(28165030-28165152)
chr7 (331-457)||(39505889-39506014)
chr7 (401-458)||(20526448-20526505)
chr7 (386-460)||(47510116-47510190)
chr7 (386-450)||(6263382-6263446)
chr7 (376-444)||(44821936-44822004)
chr7 (323-415)||(49060464-49060556)
chr7 (322-421)||(991993-992092)
chr7 (337-420)||(1417202-1417285)
chr7 (510-553)||(24363517-24363560)
chr7 (401-460)||(48470046-48470105)
chr7 (329-443)||(27481320-27481434)
chr7 (363-421)||(28340892-28340950)
chr7 (352-421)||(21453247-21453316)
chr7 (809-888)||(29137268-29137349)
chr7 (363-451)||(46825062-46825151)
chr7 (339-463)||(7623078-7623202)
chr7 (557-617)||(23214954-23215014)
chr7 (363-443)||(30456476-30456556)
chr7 (363-419)||(31002725-31002781)
chr7 (300-356)||(38713202-38713258)
chr7 (392-459)||(752962-753029)
chr7 (322-421)||(22759109-22759208)
chr7 (376-427)||(24909641-24909692)
chr7 (338-425)||(34441028-34441115)
chr7 (401-444)||(43648242-43648285)
chr7 (392-451)||(45790443-45790502)
chr7 (366-421)||(47046156-47046211)
chr7 (401-463)||(6601369-6601431)
chr7 (401-459)||(33128755-33128813)
chr7 (343-397)||(39591539-39591593)
chr7 (322-420)||(47004010-47004108)
chr7 (339-420)||(5006558-5006639)
chr7 (376-421)||(5369739-5369784)
chr7 (337-422)||(23918895-23918980)
chr7 (395-444)||(33678776-33678825)
chr7 (571-616)||(34083520-34083565)
chr7 (377-422)||(39518807-39518852)
chr7 (392-457)||(46280284-46280349)
chr7 (376-489)||(46609074-46609186)
[»] chr2 (65 HSPs)
chr2 (323-551)||(11513825-11514047)
chr2 (380-460)||(18066109-18066189)
chr2 (379-475)||(22681179-22681275)
chr2 (323-421)||(10143096-10143194)
chr2 (386-538)||(15377752-15377903)
chr2 (386-463)||(18179246-18179323)
chr2 (338-417)||(2416252-2416331)
chr2 (380-442)||(8017415-8017477)
chr2 (342-447)||(41875675-41875780)
chr2 (363-463)||(6993730-6993830)
chr2 (301-373)||(10150657-10150729)
chr2 (376-420)||(29643465-29643509)
chr2 (363-451)||(42457912-42458000)
chr2 (571-618)||(2416426-2416473)
chr2 (338-421)||(17952749-17952832)
chr2 (326-417)||(35755554-35755645)
chr2 (363-457)||(12464485-12464579)
chr2 (496-554)||(15370239-15370297)
chr2 (438-552)||(32821848-32821961)
chr2 (350-460)||(36043855-36043965)
chr2 (343-444)||(656802-656903)
chr2 (323-396)||(3423841-3423914)
chr2 (394-447)||(6167305-6167358)
chr2 (340-417)||(23143030-23143107)
chr2 (340-417)||(23554820-23554897)
chr2 (380-421)||(25800810-25800851)
chr2 (386-459)||(39983329-39983402)
chr2 (363-459)||(9395094-9395190)
chr2 (401-453)||(26143656-26143708)
chr2 (380-460)||(26626854-26626934)
chr2 (364-460)||(28039341-28039437)
chr2 (380-460)||(29316784-29316864)
chr2 (507-555)||(33503105-33503153)
chr2 (392-460)||(40279190-40279258)
chr2 (380-451)||(680484-680555)
chr2 (405-460)||(3611232-3611287)
chr2 (364-462)||(7103489-7103588)
chr2 (401-460)||(9174817-9174876)
chr2 (574-609)||(9395245-9395280)
chr2 (496-539)||(14302918-14302961)
chr2 (392-427)||(33931612-33931647)
chr2 (363-418)||(42592303-42592358)
chr2 (392-451)||(42621393-42621452)
chr2 (363-421)||(5043608-5043666)
chr2 (583-617)||(6772444-6772478)
chr2 (323-421)||(9478223-9478321)
chr2 (510-552)||(10285970-10286012)
chr2 (405-459)||(33319822-33319876)
chr2 (571-617)||(35378443-35378489)
chr2 (571-609)||(37448696-37448734)
chr2 (401-463)||(40279409-40279471)
chr2 (363-421)||(43141835-43141893)
chr2 (395-460)||(1893290-1893355)
chr2 (343-463)||(1939338-1939458)
chr2 (363-444)||(10646314-10646395)
chr2 (378-443)||(13869121-13869186)
chr2 (386-427)||(16353848-16353889)
chr2 (401-458)||(16398116-16398173)
chr2 (340-421)||(28933765-28933846)
chr2 (352-409)||(31740019-31740076)
chr2 (338-454)||(34339845-34339961)
chr2 (408-489)||(34652017-34652097)
chr2 (403-460)||(35378541-35378598)
chr2 (331-444)||(36863650-36863762)
chr2 (322-451)||(42817394-42817523)
[»] chr3 (51 HSPs)
chr3 (405-538)||(37273140-37273272)
chr3 (330-460)||(36783343-36783474)
chr3 (408-555)||(45541580-45541726)
chr3 (323-421)||(38462205-38462303)
chr3 (339-416)||(1395611-1395688)
chr3 (378-551)||(2923457-2923629)
chr3 (343-460)||(32095200-32095317)
chr3 (476-552)||(25459548-25459624)
chr3 (406-474)||(33972729-33972797)
chr3 (332-423)||(37788794-37788884)
chr3 (392-459)||(44747418-44747485)
chr3 (393-456)||(50600191-50600254)
chr3 (408-458)||(466202-466252)
chr3 (363-429)||(2201092-2201158)
chr3 (364-446)||(14145877-14145959)
chr3 (300-426)||(24235726-24235852)
chr3 (394-463)||(2719463-2719532)
chr3 (413-554)||(4534291-4534431)
chr3 (380-457)||(21367648-21367725)
chr3 (386-439)||(33405197-33405250)
chr3 (342-462)||(34254815-34254936)
chr3 (300-373)||(41159010-41159083)
chr3 (322-419)||(43116478-43116575)
chr3 (513-554)||(51929854-51929895)
chr3 (342-469)||(21862175-21862303)
chr3 (380-460)||(52618984-52619064)
chr3 (381-444)||(5436241-5436304)
chr3 (408-463)||(16790384-16790439)
chr3 (345-416)||(23952159-23952230)
chr3 (358-425)||(37689428-37689495)
chr3 (322-421)||(40122801-40122899)
chr3 (401-551)||(41633362-41633509)
chr3 (401-471)||(2128256-2128326)
chr3 (344-418)||(10101527-10101601)
chr3 (344-418)||(10212452-10212526)
chr3 (364-422)||(23315591-23315649)
chr3 (343-421)||(24887331-24887409)
chr3 (394-460)||(28622008-28622074)
chr3 (402-444)||(32582747-32582789)
chr3 (338-420)||(48364928-48365010)
chr3 (571-613)||(50760704-50760746)
chr3 (571-608)||(584159-584196)
chr3 (580-609)||(9832674-9832703)
chr3 (386-451)||(14548739-14548804)
chr3 (386-427)||(21865563-21865604)
chr3 (386-462)||(25182994-25183071)
chr3 (392-457)||(30443886-30443951)
chr3 (363-443)||(46886718-46886796)
chr3 (570-607)||(48364834-48364871)
chr3 (570-607)||(48807811-48807848)
chr3 (513-554)||(53762310-53762351)
[»] chr1 (64 HSPs)
chr1 (346-463)||(4622040-4622157)
chr1 (322-463)||(44032005-44032146)
chr1 (341-420)||(49517012-49517091)
chr1 (337-422)||(48830123-48830208)
chr1 (367-460)||(9656618-9656711)
chr1 (392-460)||(7137007-7137075)
chr1 (363-467)||(7218076-7218180)
chr1 (363-538)||(31517672-31517846)
chr1 (363-460)||(16322813-16322910)
chr1 (363-451)||(23544657-23544746)
chr1 (387-460)||(28482242-28482315)
chr1 (358-463)||(30371107-30371212)
chr1 (363-460)||(51695504-51695600)
chr1 (344-460)||(10199417-10199533)
chr1 (329-421)||(17269180-17269272)
chr1 (392-460)||(27820346-27820414)
chr1 (392-460)||(34290229-34290297)
chr1 (401-461)||(35179141-35179201)
chr1 (392-460)||(45975683-45975751)
chr1 (386-553)||(6231733-6231899)
chr1 (376-427)||(25006076-25006127)
chr1 (376-422)||(15361690-15361736)
chr1 (363-421)||(27738228-27738286)
chr1 (358-420)||(28467356-28467418)
chr1 (571-609)||(42556525-42556563)
chr1 (401-446)||(4576807-4576852)
chr1 (360-421)||(33204436-33204497)
chr1 (401-458)||(39603842-39603899)
chr1 (363-456)||(49888731-49888824)
chr1 (331-459)||(4200161-4200289)
chr1 (376-460)||(6292470-6292554)
chr1 (496-551)||(12763419-12763475)
chr1 (332-404)||(15360827-15360899)
chr1 (364-460)||(24915060-24915156)
chr1 (343-451)||(25479525-25479633)
chr1 (387-463)||(27963376-27963452)
chr1 (386-463)||(28689458-28689537)
chr1 (391-451)||(38867849-38867909)
chr1 (350-410)||(49365818-49365878)
chr1 (300-371)||(4202227-4202298)
chr1 (571-618)||(11695975-11696021)
chr1 (387-458)||(25944420-25944491)
chr1 (338-417)||(33527199-33527278)
chr1 (408-451)||(38189773-38189816)
chr1 (388-463)||(39270431-39270506)
chr1 (363-421)||(1255479-1255537)
chr1 (393-463)||(2294905-2294975)
chr1 (475-549)||(4549462-4549536)
chr1 (363-421)||(5421968-5422026)
chr1 (404-458)||(16144981-16145035)
chr1 (376-458)||(25005808-25005890)
chr1 (573-611)||(28467548-28467586)
chr1 (331-425)||(32958584-32958678)
chr1 (512-554)||(37631475-37631517)
chr1 (405-459)||(41195203-41195257)
chr1 (363-448)||(1432479-1432564)
chr1 (363-420)||(5592734-5592791)
chr1 (387-460)||(6774976-6775048)
chr1 (338-451)||(7472251-7472363)
chr1 (408-457)||(7941615-7941664)
chr1 (570-607)||(24279861-24279898)
chr1 (380-457)||(26630444-26630521)
chr1 (390-451)||(27887136-27887197)
chr1 (300-421)||(47002922-47003043)
[»] chr4 (51 HSPs)
chr4 (338-459)||(6364088-6364209)
chr4 (363-451)||(42685388-42685476)
chr4 (364-463)||(2996538-2996637)
chr4 (363-550)||(23459592-23459777)
chr4 (353-461)||(11802488-11802596)
chr4 (392-460)||(17822874-17822942)
chr4 (342-421)||(49219082-49219161)
chr4 (405-538)||(28615529-28615662)
chr4 (329-417)||(8130104-8130192)
chr4 (380-459)||(20031730-20031810)
chr4 (308-420)||(30207620-30207731)
chr4 (363-451)||(51630075-51630163)
chr4 (352-436)||(53626729-53626813)
chr4 (393-448)||(942129-942184)
chr4 (386-475)||(9841053-9841141)
chr4 (392-451)||(16199999-16200058)
chr4 (338-425)||(24160929-24161016)
chr4 (572-615)||(44638139-44638182)
chr4 (319-421)||(23819010-23819111)
chr4 (323-429)||(24443962-24444068)
chr4 (338-464)||(27043835-27043961)
chr4 (352-450)||(52735075-52735173)
chr4 (352-421)||(4071835-4071904)
chr4 (338-443)||(26883934-26884039)
chr4 (322-399)||(30024623-30024700)
chr4 (401-458)||(55302251-55302308)
chr4 (407-451)||(825508-825552)
chr4 (337-421)||(35958593-35958677)
chr4 (363-446)||(437455-437538)
chr4 (381-460)||(1706604-1706683)
chr4 (583-618)||(10205851-10205886)
chr4 (508-551)||(22796763-22796806)
chr4 (483-538)||(25487489-25487544)
chr4 (343-418)||(36460530-36460605)
chr4 (380-463)||(40174544-40174627)
chr4 (380-423)||(52754581-52754624)
chr4 (433-552)||(53315360-53315478)
chr4 (363-421)||(3175915-3175973)
chr4 (380-446)||(29778776-29778842)
chr4 (338-463)||(30338597-30338723)
chr4 (386-444)||(35571656-35571714)
chr4 (338-416)||(45128363-45128441)
chr4 (363-421)||(54325085-54325143)
chr4 (510-551)||(10172172-10172213)
chr4 (376-417)||(24091440-24091481)
chr4 (302-419)||(24160545-24160662)
chr4 (381-442)||(32421087-32421148)
chr4 (571-600)||(34430626-34430655)
chr4 (386-459)||(36048520-36048593)
chr4 (401-446)||(52315220-52315265)
chr4 (342-399)||(54327519-54327576)
[»] chr6 (40 HSPs)
chr6 (343-463)||(4246354-4246474)
chr6 (329-551)||(7148597-7148817)
chr6 (338-460)||(24476541-24476663)
chr6 (300-421)||(281896-282021)
chr6 (301-552)||(8010259-8010509)
chr6 (338-422)||(29274276-29274360)
chr6 (300-463)||(4006615-4006778)
chr6 (323-417)||(22742290-22742384)
chr6 (338-451)||(9093574-9093687)
chr6 (352-469)||(24782012-24782129)
chr6 (329-421)||(32975908-32976000)
chr6 (329-396)||(24836272-24836339)
chr6 (302-421)||(27889892-27890010)
chr6 (358-460)||(2735028-2735130)
chr6 (323-551)||(8420115-8420343)
chr6 (578-615)||(29249513-29249550)
chr6 (484-557)||(31461756-31461829)
chr6 (323-427)||(2206514-2206618)
chr6 (363-451)||(31671092-31671180)
chr6 (512-555)||(103542-103585)
chr6 (376-415)||(5550109-5550148)
chr6 (336-427)||(33787787-33787878)
chr6 (401-460)||(34430470-34430529)
chr6 (401-451)||(835267-835317)
chr6 (358-420)||(2027455-2027517)
chr6 (408-538)||(2455819-2455948)
chr6 (323-421)||(2727904-2728002)
chr6 (363-492)||(4420609-4420735)
chr6 (362-428)||(9604812-9604878)
chr6 (363-417)||(14492266-14492320)
chr6 (365-407)||(27615335-27615377)
chr6 (364-414)||(27693494-27693544)
chr6 (394-460)||(31624085-31624151)
chr6 (363-452)||(837233-837322)
chr6 (352-421)||(1402949-1403018)
chr6 (363-451)||(7785762-7785848)
chr6 (358-463)||(9667991-9668096)
chr6 (328-421)||(20671913-20672006)
chr6 (438-471)||(27924601-27924634)
chr6 (394-471)||(28641747-28641824)
[»] scaffold0024 (2 HSPs)
scaffold0024 (338-426)||(27515-27603)
scaffold0024 (401-450)||(21304-21353)
[»] scaffold0100 (1 HSPs)
scaffold0100 (320-422)||(42538-42639)
[»] scaffold0221 (1 HSPs)
scaffold0221 (401-458)||(22233-22290)


Alignment Details
Target: chr8 (Bit Score: 899; Significance: 0; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 899; E-Value: 0
Query Start/End: Original strand, 8 - 1045
Target Start/End: Original strand, 38874255 - 38875301
Alignment:
Q  8 cgctatgcctctcgcttctctgttcctatcaatccattcgttccagaggtactcgctcactcttcgctgcttcaaaaccattcagagttaattttgttgc 107  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38874255 cgctatgcctctcgcttctccgttcctatcaatccattcgttccagaggtactcgctcattcttcgctgcttcaaaaccattcagagttaattttgttgc 38874354  T
Q  108 aatgcaggttattgaagccgttgattcattgaattcagaattcagagcagtggataatttagttgcatacaataccacccgtgttcttaaagcttttcac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38874355 aatgcaggttattgaagccgttgattcattgaattcagaattcagagcagtggataatttagttgcatacaataccacccgtgttcttaaagcttttcac 38874454  T
Q  208 aatgccagactcggttctcatgtatgtaactacatgctttcatttcgataaccgttttgtaaatgaatagttattttaagtatttatttctgggataaac 307  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  38874455 aatgccagacttggttctcatgtatgtaactacatgctttcatttcgataaccgttttgtaaatgaatagttattttaagtatttatttctgggatatac 38874554  T
Q  308 aacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctg 407  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38874555 aacttaattatgcatttatcgtataagtgtttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctg 38874654  T
Q  408 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttacc 507  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38874655 ttttcataagctattttggagaacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttacc 38874754  T
Q  508 aatgcttatgctaatagataagctcaaataaaacaatccaaacaggcttagtctcattggtctttatgctagtaaataagctcaaataagtcaatctaaa 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38874755 aatgcttatgctaatagataagctcaaataaaacaatccaaacaggcttagtctcattggtctttatgctagtaaataagctcaaataagtcaatctaaa 38874854  T
Q  608 catgccctaattggttattttgttaatgctgtcagcactttggtggtagcactggttatggtcatgatgaagctggggggcgtgaagctctcgaccaggc 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  38874855 catgccctaattggttattttgttaatgctgtcagcactttggtggttgcactggttatggtcatgatgaaactggggggcgtgaagctcttgaccaggc 38874954  T
Q  708 ttttgcagaaattgttggagcagaatcagctattgttcgttcacaggttcttaactttcactgttttctttatattaagttacttattaataggggatat 807  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38874955 ttttgcagaaattgttggagcagaatcagctattgttcgttcacaggttcttaactttccctgttttctttatattaagttacttattaataggggatat 38875054  T
Q  808 gaggttggtttggtggctgaagta-gggagttaaggagtgaagtgataaggggtcgagggtttgaaccacactcccagcatat-ataccaacaatgttaa 905  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38875055 gaggttggtttggtggctgaagtaggggaattaaggagtgaagtgataaggggtcgagggtttgaaccacactcccagcatataataccaacaatgttaa 38875154  T
Q  906 cattggcgatttaaaa--gaaaaggttacttattaatgttcctcgttg-atatgacg-aaagtgagttc-atgtaaa-tgatttatgtttgggatacatt 999  Q
    |||||||| |||||||   ||||||||||||||||||||| ||||||| |||||||| ||||||||||| ||||||| |||||||||||| |||||||||    
T  38875155 cattggcggtttaaaaagaaaaaggttacttattaatgtt-ctcgttgaatatgacgaaaagtgagttcaatgtaaagtgatttatgttt-ggatacatt 38875252  T
Q  1000 tatt--aaaatgcgctg-acaataaatttaaagctaaaagtcagctata 1045  Q
    ||||  ||||||||||| || ||||||||||||||||||||||||||||    
T  38875253 tatttaaaaatgcgctgaacgataaatttaaagctaaaagtcagctata 38875301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 321 - 463
Target Start/End: Original strand, 12361113 - 12361256
Alignment:
Q  321 atttatcgtat-aagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagct 419  Q
    ||||||||||| ||||  |||| |||||||| ||||| ||| ||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||| |    
T  12361113 atttatcgtatgaagtacttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataagtt 12361212  T
Q  420 attttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    |||  ||| | |  ||| ||||||| | |||| |||||||||||    
T  12361213 attcaggagagctaatggaaataagttgaaaacagcttatggac 12361256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 338 - 460
Target Start/End: Original strand, 10114429 - 10114550
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    ||||||||||| | ||||| || | |||||||||||  |||  |||| ||||  |||||||| |||||||||||||| |||||| ||||| |||||||||    
T  10114429 ttatgtataagctatttctatagcaaaagataaaata-agttgaattgttttggtataagctataagctgttttcattagctatattggagaacatatga 10114527  T
Q  438 aaataagctaaaaatagcttatg 460  Q
    ||||||||| |||| ||| ||||    
T  10114528 aaataagctgaaaacagcatatg 10114550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 338 - 463
Target Start/End: Complemental strand, 28769470 - 28769345
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    ||||||||||| | || || |||| ||  |||||||  ||||||| | ||||| |||||||| ||||||||||||||||||||||||||| |   ||||     
T  28769470 ttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatgg 28769371  T
Q  438 aaataagctaaaaatagcttatggac 463  Q
    ||||||||| |||| | |||||||||    
T  28769370 aaataagctgaaaacaacttatggac 28769345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 392 - 460
Target Start/End: Original strand, 27028824 - 27028892
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||| ||| ||||||||||||||||||||| ||||| | | |||||||||||||| |||||||||||||    
T  27028824 tatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatg 27028892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 421
Target Start/End: Original strand, 4558730 - 4558820
Alignment:
Q  331 taagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||| |||||||||||| | ||||| |||  |||||||||||  ||| ||||| |||||||||| ||| |||||||||| ||||||||||    
T  4558730 taagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctat 4558820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 340 - 421
Target Start/End: Complemental strand, 1470985 - 1470904
Alignment:
Q  340 atgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||||| | ||||| |||  |||||||||||  |||||||||  ||||||||||||| |||||||||||||||| ||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcataacctat 1470904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 460
Target Start/End: Original strand, 8062501 - 8062585
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||||||| |||||||||||||| |||| |||| ||||||||||| || || |   ||||||||||||||  ||||||||||||    
T  8062501 agtcaaattgttttcatataagctataagatgttctcataagctatcttagagagtttatgaaaataagctggaaatagcttatg 8062585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 419
Target Start/End: Original strand, 31705025 - 31705105
Alignment:
Q  340 atgtataagttgtttctgtaactaaagataaaatcgagtcaaatt-cttttcatataagctctaagctgttttcataagct 419  Q
    ||||||||| | ||||||||   ||||||||||||  |||||||| | ||||||||||||| |||||||||||||||||||    
T  31705025 atgtataagctatttctgtactaaaagataaaatcatgtcaaattacgtttcatataagctataagctgttttcataagct 31705105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 35220787 - 35220731
Alignment:
Q  405 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgg 461  Q
    |||||||||||||||||| |||| | | ||| |||||||||||||||||||||||||    
T  35220787 ctgttttcataagctattctggagagcttataaaaataagctaaaaatagcttatgg 35220731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 417
Target Start/End: Complemental strand, 787237 - 787158
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 417  Q
    |||||| |||| |||||| |||||  ||||||||||  ||||||||| || ||||||||||| ||| |||||||||||||    
T  787237 ttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcatataagctataaactgttttcataag 787158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 401 - 460
Target Start/End: Complemental strand, 43718005 - 43717946
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||||||| |||||||||| ||||| ||| ||||||| ||||||||||| ||||||||    
T  43718005 taagctgtttgcataagctatcttggagaacttatgaaagtaagctaaaaacagcttatg 43717946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 433 - 555
Target Start/End: Original strand, 7008633 - 7008753
Alignment:
Q  433 tatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctc 532  Q
    ||||||||||||||||||||| |||| |||| ||| ||| | |||||||||||||||||    ||| |||| || | ||||||||| | ||||||| |||    
T  7008633 tatgaaaataagctaaaaatatcttaaggacatgtcata-ggttgtttctataagctctctctaac-gtctcacaagtgcttatgccagtagataaactc 7008730  T
Q  533 aaataaaacaatccaaacaggct 555  Q
    ||||||  |||| ||||||||||    
T  7008731 aaataagtcaattcaaacaggct 7008753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 339 - 421
Target Start/End: Original strand, 31884534 - 31884616
Alignment:
Q  339 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||||||||| ||||| |||| ||| |||||||| | |  |||| |||||||||||||| |||  ||||||||||||||||    
T  31884534 tatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataaattgttttcataagctat 31884616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 363 - 421
Target Start/End: Original strand, 34770856 - 34770914
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||||||||  ||||||||| ||||||| |||||| |||| ||||||||||||||||    
T  34770856 aaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctat 34770914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 323 - 429
Target Start/End: Original strand, 35869761 - 35869867
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    ||||| |||||||| |||||||||||   |||||  ||| ||| |||||||  | |||||   |||||||||||||| |||| |||||||||||||||||    
T  35869761 ttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttgttttcataagctatt 35869860  T
Q  423 ttggata 429  Q
     ||||||    
T  35869861 gtggata 35869867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 460
Target Start/End: Original strand, 2482830 - 2482924
Alignment:
Q  364 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||||||||  ||||||| | ||||  |||||||| ||||||||||||||  ||||| ||||||||| |||  ||||||||| |||| ||||||||    
T  2482830 aagataaaataaagtcaaaatgtttttgtataagctataagctgttttcat--gctatcttggataacttatagaaataagctgaaaacagcttatg 2482924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 6509408 - 6509351
Alignment:
Q  364 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||||||  ||||||||| | || ||||||||| |||||||||||||||||||||    
T  6509408 aagataaaataaagtcaaattgtatttatataagctataagctgttttcataagctat 6509351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 463
Target Start/End: Original strand, 11795031 - 11795156
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    ||||||||||| | ||||| | || ||| ||| |||  ||||| | | |||||||||||| | ||||||| |||||||||||||| |||| | | ||||     
T  11795031 ttatgtataagctttttctatgacaaaacatacaataaagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatgg 11795130  T
Q  438 aaataagctaaaaatagcttatggac 463  Q
    ||||||||| |||| || ||||||||    
T  11795131 aaataagctgaaaacaggttatggac 11795156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 14949809 - 14949882
Alignment:
Q  320 catttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcata 393  Q
    |||||||| || ||||| ||||||||||| |  |||| |||| ||||||||||| |||||||| ||||||||||    
T  14949809 catttatcatacaagttcttatgtataagctacttctataacaaaagataaaatagagtcaaactcttttcata 14949882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 418
Target Start/End: Original strand, 42597331 - 42597420
Alignment:
Q  329 tataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagc 418  Q
    |||||||  ||||||||||| | ||||| |||| |||||||||||  ||| ||||| |||||||  ||||| |||| |||||||||||||    
T  42597331 tataagtacttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 7514560 - 7514604
Alignment:
Q  381 aattcttttcatataagctctaagctgttttcataagctattttg 425  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||    
T  7514560 aattgttttcatataagctacaagctgttttcataagctattttg 7514604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 463
Target Start/End: Original strand, 30013195 - 30013282
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    ||||||| | ||| |||||||||| |||||||||||||||||||||  || | |||  ||| ||||||||| ||||||| ||| ||||    
T  30013195 agtcaaactgtttccatataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaatagtttagggac 30013282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 460
Target Start/End: Complemental strand, 30251522 - 30251463
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||||||||||||||||||| |||||  || ||||||||||||||  ||| ||||||||    
T  30251522 taagctgttttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatg 30251463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 421
Target Start/End: Complemental strand, 41620422 - 41620339
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||| |||||||| ||| |||||| |||||||||||  ||||||||| | ||||||||  ||  |||||||||| |||||||||    
T  41620422 ttatatataagttatttttgtaacaaaagataaaataaagtcaaattatgttcatatattctaaaagctgtttttataagctat 41620339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 421
Target Start/End: Complemental strand, 9834879 - 9834837
Alignment:
Q  379 caaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||| |||||||||||||| |||| ||||||||||||||||    
T  9834879 caaattgttttcatataagctataagttgttttcataagctat 9834837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 571 - 617
Target Start/End: Complemental strand, 14926939 - 14926893
Alignment:
Q  571 ttatgctagtaaataagctcaaataagtcaatctaaacatgccctaa 617  Q
    |||||| |||||||||| ||||||||||||||| ||||| |||||||    
T  14926939 ttatgccagtaaataagttcaaataagtcaatccaaacaagccctaa 14926893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 409 - 467
Target Start/End: Original strand, 21653091 - 21653149
Alignment:
Q  409 tttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgt 467  Q
    |||||| |||||| ||||| | | |||||||||||||| ||||||||||||| ||||||    
T  21653091 tttcattagctatcttggagagcttatgaaaataagctgaaaatagcttatgaacgtgt 21653149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 414
Target Start/End: Complemental strand, 29262979 - 29262929
Alignment:
Q  364 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcat 414  Q
    ||||||||||  ||||||||| |||||||||||||| ||||||| ||||||    
T  29262979 aagataaaataaagtcaaattattttcatataagctgtaagctgatttcat 29262929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 571 - 609
Target Start/End: Complemental strand, 42215257 - 42215219
Alignment:
Q  571 ttatgctagtaaataagctcaaataagtcaatctaaaca 609  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  42215257 ttatgccagtaaataagctcaaataagttaatctaaaca 42215219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 6864562 - 6864501
Alignment:
Q  366 gataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttgga 427  Q
    ||||||||  ||||||| | ||||||| |||| | |||| ||||||||||||||||||||||    
T  6864562 gataaaataaagtcaaactattttcatgtaagttataagttgttttcataagctattttgga 6864501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 375 - 420
Target Start/End: Original strand, 7645954 - 7645999
Alignment:
Q  375 gagtcaaattcttttcatataagctctaagctgttttcataagcta 420  Q
    |||||||||| ||||||| |||||| |||| |||||||||||||||    
T  7645954 gagtcaaattgttttcatgtaagctataagttgttttcataagcta 7645999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 570 - 615
Target Start/End: Original strand, 9700113 - 9700158
Alignment:
Q  570 tttatgctagtaaataagctcaaataagtcaatctaaacatgccct 615  Q
    |||||||||||| |||||||||||||||| |||| ||||| |||||    
T  9700113 tttatgctagtagataagctcaaataagttaatccaaacaggccct 9700158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 386 - 451
Target Start/End: Complemental strand, 9956897 - 9956832
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    ||||| |||||| | |||| ||||||||||| |||| ||||| ||| |||||||||||||| ||||    
T  9956897 ttttcctataagttataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaa 9956832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 366 - 451
Target Start/End: Original strand, 11376670 - 11376755
Alignment:
Q  366 gataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    ||||||||  |||| |||| |||| ||||||||| |||| || |||| ||||||||||| || ||  |||||||||||||| ||||    
T  11376670 gataaaataaagtctaattattttgatataagctataagatgctttcttaagctattttagagaatctatgaaaataagctgaaaa 11376755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 343 - 460
Target Start/End: Original strand, 31862437 - 31862554
Alignment:
Q  343 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 442  Q
    |||||||| ||||  |||| |||||||| ||  ||||||| | || || |||||||| |||| |||||||||||| |||  | || | | ||||||||||    
T  31862437 tataagttatttcaataacaaaagataatataaagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaata 31862536  T
Q  443 agctaaaaatagcttatg 460  Q
    |||| |||| ||||||||    
T  31862537 agctgaaaacagcttatg 31862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 340 - 421
Target Start/End: Complemental strand, 34080395 - 34080314
Alignment:
Q  340 atgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||||| | ||||| |||| |||||||||||  ||||||| | ||  | |||||||| ||||||||||||||| |||||    
T  34080395 atgtataagctatttctttaacaaaagataaaatgaagtcaaactgttaccgtataagctataagctgttttcatacgctat 34080314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 44236887 - 44236834
Alignment:
Q  405 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 458  Q
    ||||||||||||||||| ||||| | | |||||||||||||| |||||| ||||    
T  44236887 ctgttttcataagctatattggagagcttatgaaaataagctgaaaataactta 44236834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 2e-24; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 338 - 460
Target Start/End: Original strand, 39105403 - 39105525
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    ||||||||||| | ||||| || ||||| || ||||  ||| ||||| ||||| |||||||| ||| ||||||||||||||||| ||||| ||| |||||    
T  39105403 ttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatga 39105502  T
Q  438 aaataagctaaaaatagcttatg 460  Q
    |||||||||||||||||||||||    
T  39105503 aaataagctaaaaatagcttatg 39105525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 338 - 539
Target Start/End: Original strand, 32172592 - 32172792
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    ||||||||||  | |||||  ||| |||||||||||  |||||| || ||| |||||||||| |||||||||||||||||||||  || | |||  |||     
T  32172592 ttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatgg 32172691  T
Q  438 aaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaata 537  Q
    ||||||||| ||||| |||||||||| ||| ||| | ||||||| ||||||||| |  |||  ||| || | ||||||||||| || |||||||||||||    
T  32172692 aaataagctgaaaatggcttatggacatgtcataag-ttgtttccataagctctcccaaactatctcacaagtgcttatgctagtatataagctcaaata 32172790  T
Q  538 aa 539  Q
    ||    
T  32172791 aa 32172792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 338 - 460
Target Start/End: Complemental strand, 9202879 - 9202757
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    |||| |||||| | |||||||| | |||||||||||  ||| ||||| |||||||||||||  ||||||||||||||||| ||| ||| | ||| |||||    
T  9202879 ttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatga 9202780  T
Q  438 aaataagctaaaaatagcttatg 460  Q
    |||||||||  ||| ||||||||    
T  9202779 aaataagctggaaacagcttatg 9202757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 32059734 - 32059642
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataa 416  Q
    ||||| |||||||  ||||||||||| ||||| ||||||||| ||||||||  ||||||| | |||||||||||||| ||||||||||||||||    
T  32059734 ttatcatataagtgcttatgtataagctgtttttgtaactaa-gataaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 363 - 444
Target Start/End: Original strand, 12425535 - 12425616
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 444  Q
    |||||||||||  ||| ||||| ||||| |||||||| ||||||||||||| ||||||| ||||| ||| ||||||||||||    
T  12425535 aaagataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataag 12425616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 339 - 467
Target Start/End: Complemental strand, 36796836 - 36796708
Alignment:
Q  339 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaa 438  Q
    |||||||||||| |||||| ||| ||| |||||||   || ||||| |||||| ||||||| ||||||||||||||  ||||| ||||| ||| ||  ||    
T  36796836 tatgtataagttatttctgcaacaaaaaataaaataaggttaaattattttcacataagctataagctgttttcatttgctatattggaaaacttacaaa 36796737  T
Q  439 aataagctaaaaatagcttatggacgtgt 467  Q
    ||||| || |||| |||||||| ||||||    
T  36796736 aataaactgaaaacagcttatgaacgtgt 36796708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 401 - 460
Target Start/End: Complemental strand, 4014492 - 4014433
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||||| |||| ||||||||    
T  4014492 taagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatg 4014433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 363 - 488
Target Start/End: Complemental strand, 10272537 - 10272413
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 462  Q
    |||||||||||  ||||||||| ||||| |||||||| |||| ||||||||||||| || ||||| |   |||||||||||||| |||| | ||||  ||    
T  10272537 aaagataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacaga 10272438  T
Q  463 cgtgttatatgtttgtttctataagc 488  Q
    | ||| ||| | ||||||||||||||    
T  10272437 catgtcataag-ttgtttctataagc 10272413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 352 - 421
Target Start/End: Original strand, 14295459 - 14295528
Alignment:
Q  352 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||| |||| |||||||||||  ||||||| | |||||||||||||| |||||||||||| ||||||||    
T  14295459 tttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctat 14295528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 329 - 422
Target Start/End: Complemental strand, 18704175 - 18704083
Alignment:
Q  329 tataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    |||||||| ||||||||||||| ||||| |||| |||||| ||||  ||||||  | |||| ||||||||| |||| |||||||||||||||||    
T  18704175 tataagttcttatgtataagttatttctataacaaaagat-aaataaagtcaagctatttttatataagctataagttgttttcataagctatt 18704083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 338 - 421
Target Start/End: Complemental strand, 26209543 - 26209461
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttca-tataagctctaagctgttttcataagctat 421  Q
    ||||||||||||| ||||| ||||  ||||||||||  |||| |||| |||||| |||||||| |||||||||||||||||||||    
T  26209543 ttatgtataagttatttctataac--aagataaaataaagtccaattgttttcaatataagctataagctgttttcataagctat 26209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 346 - 459
Target Start/End: Complemental strand, 37588483 - 37588370
Alignment:
Q  346 aagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagc 445  Q
    ||||| ||||| |||  |||||||||||| | |||||   |||||||||||||| |||| |||||||||||| |||| |||| | | |||| ||||||||    
T  37588483 aagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagc 37588384  T
Q  446 taaaaatagcttat 459  Q
    | |||| |||||||    
T  37588383 tgaaaacagcttat 37588370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 386 - 454
Target Start/End: Original strand, 28776980 - 28777048
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatag 454  Q
    ||||| |||| ||| ||||||||||||||||||||| ||||| |||  ||||||||||| |||||||||    
T  28776980 ttttcgtataggctataagctgttttcataagctatcttggagaactaatgaaaataagataaaaatag 28777048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 422
Target Start/End: Complemental strand, 35135802 - 35135713
Alignment:
Q  329 tataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    ||||||| |||||||||||| | ||||| |||| |||||||||||  ||||||| | |||||||||||||| ||||    ||||||||||||||    
T  35135802 tataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataag----tttcataagctatt 35135713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 9703365 - 9703286
Alignment:
Q  344 ataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattt 423  Q
    ||||||| |||||||||| | |||||||||  ||||||| || |||||||||||||  ||| |||||||||||| |||||    
T  9703365 ataagttatttctgtaacaagagataaaataaagtcaaactcatttcatataagctacaagttgttttcataagttattt 9703286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 421
Target Start/End: Complemental strand, 38047986 - 38047903
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||||||| | | ||| |||| |||||||||||  ||||||||| ||||||||||  || || ||||||||||||||||||    
T  38047986 ttatgtataagctatatctctaacaaaagataaaataaagtcaaattattttcatatatactatatgctgttttcataagctat 38047903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 386 - 460
Target Start/End: Original strand, 2568645 - 2568719
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||| |||||||| |||| ||||||||||||||||  |||| | |  |||||||||||||||||||| ||||||    
T  2568645 ttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatg 2568719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 380 - 446
Target Start/End: Original strand, 7319387 - 7319453
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 446  Q
    ||||| |||||||||||||| ||| |||||||| |||||||| ||||| ||| ||| ||||||||||    
T  7319387 aaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataagct 7319453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 376 - 446
Target Start/End: Complemental strand, 35553281 - 35553211
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 446  Q
    |||||||||||||||||||||||| ||| || |||||||| |||||| |||| | | |||| |||||||||    
T  35553281 agtcaaattcttttcatataagctataaactattttcatacgctattctggagagcttatggaaataagct 35553211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 405 - 491
Target Start/End: Original strand, 41052874 - 41052959
Alignment:
Q  405 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctct 491  Q
    |||||||||||| |||||||||| | | |||| ||||||| ||||||||| ||||| || ||| ||| | |||||||||||||||||    
T  41052874 ctgttttcataacctattttggagagcttatggaaataagttaaaaatagtttatgaacatgtcata-ggttgtttctataagctct 41052959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 395 - 460
Target Start/End: Original strand, 7984965 - 7985030
Alignment:
Q  395 aagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||| |||||| |||||||||||||| ||||| ||  |||||||||||||| |||| ||||||||    
T  7984965 aagctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 7985030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 570 - 615
Target Start/End: Original strand, 9174928 - 9174973
Alignment:
Q  570 tttatgctagtaaataagctcaaataagtcaatctaaacatgccct 615  Q
    ||||||||| || ||||||||||||||||||||| |||||||||||    
T  9174928 tttatgctaatagataagctcaaataagtcaatccaaacatgccct 9174973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 12975326 - 12975375
Alignment:
Q  378 tcaaattcttttcatataagctctaagctgttttcataagctattttgga 427  Q
    ||||||| |||||||||||||| |||||||| |||||||||||| |||||    
T  12975326 tcaaattgttttcatataagctataagctgtgttcataagctatcttgga 12975375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 459
Target Start/End: Complemental strand, 37526322 - 37526209
Alignment:
Q  346 aagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagc 445  Q
    ||||| ||||| |||  |||||||||||| | |||||   |||||||||||||| |||| |||||||||||| | || |||| | | |||| ||||||||    
T  37526322 aagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagc 37526223  T
Q  446 taaaaatagcttat 459  Q
    | |||| |||||||    
T  37526222 tgaaaacagcttat 37526209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 459
Target Start/End: Complemental strand, 37690767 - 37690646
Alignment:
Q  339 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcat-aagctattttggataacatatga 437  Q
    |||||| ||||| ||||| |||  |||||||||||| | |||||   |||||||||||||| |||| ||||||||| ||| |||| |||| | | ||||     
T  37690767 tatgtaaaagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataaagttattatggagagcttatgg 37690668  T
Q  438 aaataagctaaaaatagcttat 459  Q
    ||||||||| |||| |||||||    
T  37690667 aaataagctgaaaacagcttat 37690646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 1619071 - 1619150
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||||||| | |||||||| |||||||||||||||||| | |||||| | ||||||||||| |||| |||| || |||||    
T  1619071 aaattctttccgtataagctataagctgttttcataagcca-tttggagagcatatgaaaatcagctgaaaacagtttatg 1619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 392 - 460
Target Start/End: Complemental strand, 41981942 - 41981874
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||| || |||||||||||||||| ||||||| || ||| || |||||||||||||||  ||||||||    
T  41981942 tataaactataagctgttttcataaactatttttgagaacttacgaaaataagctaaaagcagcttatg 41981874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 460
Target Start/End: Complemental strand, 6587195 - 6587116
Alignment:
Q  381 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||| ||||| |||||||| |||| ||||||||||||||||  |||| ||| | ||||||||||||  ||| ||||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatg 6587116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 552
Target Start/End: Complemental strand, 11297232 - 11297114
Alignment:
Q  433 tatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctc 532  Q
    |||||||||||||| ||||||||| || ||| |||  || ||| ||||| ||||||||||   ||||||||||| | || |||||| | ||||||||||     
T  11297232 tatgaaaataagctgaaaatagctaattgacatgtcttaagtt-gtttccataagctctttcaaacagtcttacaagtgtttatgccactagataagctt 11297134  T
Q  533 aaataaaacaatccaaacag 552  Q
    ||||||  |||| |||||||    
T  11297133 aaataagtcaattcaaacag 11297114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 420
Target Start/End: Complemental strand, 12595860 - 12595789
Alignment:
Q  349 ttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 420  Q
    |||||||| |||| |||||||||||  ||| ||||| ||||||||||| || | ||||| ||||||||||||    
T  12595860 ttgtttctataacaaaagataaaataaagttaaattgttttcatataaactatgagctggtttcataagcta 12595789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 421
Target Start/End: Original strand, 16889674 - 16889757
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||||||| | ||||  |||| ||||||||| |  ||||||| | |||| ||| ||||| |||||||||||||||||||||    
T  16889674 ttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctat 16889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 603
Target Start/End: Original strand, 31723903 - 31723950
Alignment:
Q  556 tagtctcattggtctttatgctagtaaataagctcaaataagtcaatc 603  Q
    |||||||||  || |||||||||||| |||||||||||||||||||||    
T  31723903 tagtctcataagtgtttatgctagtacataagctcaaataagtcaatc 31723950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 551
Target Start/End: Original strand, 36326104 - 36326159
Alignment:
Q  496 aacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 551  Q
    |||| ||| |||| ||||||||| |||||||||||| |||||| ||||||||||||    
T  36326104 aacaatctcaccagtgcttatgccaatagataagctaaaataagacaatccaaaca 36326159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 41957540 - 41957457
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    ||||| ||||||| |||| | |||||||||||||||||||||  | || ||| |||||||||||| | |||| | |||||||||    
T  41957540 aaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggac 41957457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 570 - 600
Target Start/End: Original strand, 1899265 - 1899295
Alignment:
Q  570 tttatgctagtaaataagctcaaataagtca 600  Q
    |||||||||||||||||||||||||||||||    
T  1899265 tttatgctagtaaataagctcaaataagtca 1899295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 4620187 - 4620229
Alignment:
Q  393 ataagctctaagctgttttcataagctattttggataacatat 435  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||    
T  4620187 ataagctataagctgttttcataagctatgttggagaacatat 4620229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 7319072 - 7319014
Alignment:
Q  405 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    ||||||||||||||||| ||||| ||| |||||||||||||| | || | |||||||||    
T  7319072 ctgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggac 7319014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 513 - 551
Target Start/End: Original strand, 9174929 - 9174967
Alignment:
Q  513 ttatgctaatagataagctcaaataaaacaatccaaaca 551  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  9174929 ttatgctaatagataagctcaaataagtcaatccaaaca 9174967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 406 - 460
Target Start/End: Original strand, 10639960 - 10640014
Alignment:
Q  406 tgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||| ||||| |||||||||| ||| ||||||||||||||| ||| ||||||||    
T  10639960 tgtttacataaactattttggagaacttatgaaaataagctagaaaaagcttatg 10640014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 15402960 - 15402874
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatttt 424  Q
    |||||| |||||| ||||  |||| ||||||||||| ||||| || | |||||| | ||||| |||| ||||||||||| |||||||    
T  15402960 ttatgtttaagttatttcattaacaaaagataaaatagagtcgaaatgttttcaaaaaagctataagttgttttcataacctatttt 15402874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 24030469 - 24030419
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    |||| |||||| ||||||||| || |||||| |||||||||||||||||||    
T  24030469 taagttgtttttataagctatattagataacttatgaaaataagctaaaaa 24030419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 32969241 - 32969187
Alignment:
Q  345 taagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagct 399  Q
    |||||||||||| |||| |||||||||||  ||||||||| |||| |||||||||    
T  32969241 taagttgtttctataacaaaagataaaataaagtcaaattatttttatataagct 32969187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 583 - 621
Target Start/End: Complemental strand, 34736472 - 34736434
Alignment:
Q  583 ataagctcaaataagtcaatctaaacatgccctaattgg 621  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  34736472 ataagctcaaataagtcaatccaaacatgccctatttgg 34736434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 570 - 615
Target Start/End: Complemental strand, 8651310 - 8651265
Alignment:
Q  570 tttatgctagtaaataagctcaaataagtcaatctaaacatgccct 615  Q
    |||||||||| | ||||||||||||||| ||||| |||||||||||    
T  8651310 tttatgctagaagataagctcaaataaggcaatccaaacatgccct 8651265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 453 - 538
Target Start/End: Original strand, 11457152 - 11457236
Alignment:
Q  453 agcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataa 538  Q
    ||||||||||| ||| ||| ||| ||||| |||||||||||  |||||||| || | || || ||| |||||||||||||||||||    
T  11457152 agcttatggacatgtcataagtt-gtttccataagctcttcaaaacagtctcacaagtgtttctgccaatagataagctcaaataa 11457236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 16937841 - 16937800
Alignment:
Q  512 cttatgctaatagataagctcaaataaaacaatccaaacagg 553  Q
    ||||||||| |||||||||||||||||  |||||||||||||    
T  16937841 cttatgctagtagataagctcaaataagccaatccaaacagg 16937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 34205216 - 34205261
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||||| |||| ||||||||| |||| ||||||||||||||||    
T  34205216 agtcaaattatttttatataagctataagttgttttcataagctat 34205261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 40119945 - 40119880
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 457  Q
    |||||||| ||| |||||||||||||| || ||||||||| | ||||||||| |||| || |||||    
T  40119945 tataagctataacctgttttcataagcgatcttggataacttgtgaaaataatctaagaacagctt 40119880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 40120084 - 40120145
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatttt 424  Q
    |||||||||||| | ||||||| |||||||||||||| || | |||||||| |||| |||||    
T  40120084 aaagataaaatcaaatcaaattgttttcatataagctataggttgttttcacaagcaatttt 40120145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 2e-21; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 363 - 460
Target Start/End: Complemental strand, 40689092 - 40688995
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||||||||  ||| ||||| |||||||||||||| |||||||| ||||||||||||  |||||||| |||||||||||||| |||| ||||||||    
T  40689092 aaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagcttatg 40688995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 320 - 446
Target Start/End: Original strand, 27548184 - 27548310
Alignment:
Q  320 catttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagct 419  Q
    |||||||| |||||||  |||| |||||| | ||||  || | |||||||||||  |||| |||| ||||||| |||||| |||||||||||||||||||    
T  27548184 catttatcttataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataagctgttttcataagct 27548283  T
Q  420 attttggataacatatgaaaataagct 446  Q
    || ||||||||| |||| | |||||||    
T  27548284 atcttggataacttatggagataagct 27548310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 337 - 515
Target Start/End: Complemental strand, 48157252 - 48157075
Alignment:
Q  337 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatg 436  Q
    ||||||||||| || ||||| |||  |||||||||||  ||| ||||| |||| ||||||||| |||  |||||||| ||||||||  ||| | | ||||    
T  48157252 tttatgtataacttatttctataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttcacaagctattcgggagatcttatg 48157153  T
Q  437 aaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgctta 515  Q
     ||||||||| |||| ||||||||||| ||  ||| | ||||||||||||||||| |  |||||||| || ||||||||    
T  48157152 gaaataagctgaaaacagcttatggacatggcataag-ttgtttctataagctctcccaaacagtctcacaaatgctta 48157075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 379 - 475
Target Start/End: Original strand, 38010694 - 38010790
Alignment:
Q  379 caaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtt 475  Q
    |||||| |||||||||||||| |||||||||||||||| ||||  | || ||| |||| |||||||||||||| |||||||| || |||||| ||||    
T  38010694 caaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgtt 38010790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 380 - 456
Target Start/End: Original strand, 47177617 - 47177693
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagct 456  Q
    ||||| |||||||||||||| ||||||||||||| ||||||| ||||| ||  |||||||||||||||||| |||||    
T  47177617 aaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaataagctaaaagtagct 47177693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 364 - 451
Target Start/End: Original strand, 12110325 - 12110412
Alignment:
Q  364 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    ||||||||||  ||||||||| ||||  |||||||| ||||||||||||||||||||| ||| | ||| ||||||||||| |||||||    
T  12110325 aagataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaa 12110412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 338 - 460
Target Start/End: Original strand, 28165030 - 28165152
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    ||||||||||||| ||||| |||| |||||||||||  ||||||||| |||| ||||||||| ||| |||| || |||||||||  |||| | | ||||     
T  28165030 ttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatgg 28165129  T
Q  438 aaataagctaaaaatagcttatg 460  Q
    ||||||| | |||| ||||||||    
T  28165130 aaataagttgaaaacagcttatg 28165152  T

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Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 331 - 457
Target Start/End: Original strand, 39505889 - 39506014
Alignment:
Q  331 taagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataa 430  Q
    ||||| |||||||||||||| ||| |||| | |||||| |||| |||||||| | ||| |||||||||  |||| ||||||||||||||||| |||| |     
T  39505889 taagtgtttatgtataagttatttttgtagcaaaagattaaatagagtcaaactgttt-catataagcattaagttgttttcataagctattctggagag 39505987  T
Q  431 catatgaaaataagctaaaaatagctt 457  Q
      |||| ||||||||| ||||||||||    
T  39505988 tttatggaaataagctgaaaatagctt 39506014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 20526448 - 20526505
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 458  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||||| ||||||    
T  20526448 taagctgttttcataagctattttggagaactaatgaaaataagctaaaaacagctta 20526505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 386 - 460
Target Start/End: Original strand, 47510116 - 47510190
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||||||||||| |||||||||||||||| || | ||||| ||| | ||||||||||||||||  ||||||||    
T  47510116 ttttcatataagctgtaagctgttttcataaactctcttggacaacttgtgaaaataagctaaaaggagcttatg 47510190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 386 - 450
Target Start/End: Complemental strand, 6263446 - 6263382
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaa 450  Q
    |||||||||||| | ||||||| |||||||||||||| |||| | |||||| |||||||||||||    
T  6263446 ttttcatataagttataagctgatttcataagctattatggagagcatatggaaataagctaaaa 6263382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 444
Target Start/End: Original strand, 44821936 - 44822004
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 444  Q
    ||||||||| ||||  |||||| | |||||||||||||||||||||| |||| ||| ||||||||||||    
T  44821936 agtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataag 44822004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 415
Target Start/End: Original strand, 49060464 - 49060556
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcata 415  Q
    ||||| ||||||| |||||||||||| | ||||| |||| ||| |||||||  ||||||||| |||| ||||||||| |||| | ||||||||    
T  49060464 ttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagttattttcata 49060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 991993 - 992092
Alignment:
Q  322 tttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||| |||||||  ||| ||||||||||||||| |||| ||| |||||||  || |||| | |||||||||||| | ||| || ||||||||||||||    
T  991993 tttatcatataagtgcttacgtataagttgtttctataacaaaaaataaaataaagacaaaatattttcatataaggtataaacttttttcataagctat 992092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 1417202 - 1417285
Alignment:
Q  337 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 420  Q
    |||||||||||  | ||| | |||| |||||||||||  ||||||||| |||||||||||||  |||| |||||||||||||||    
T  1417202 tttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataagcta 1417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 510 - 553
Target Start/End: Complemental strand, 24363560 - 24363517
Alignment:
Q  510 tgcttatgctaatagataagctcaaataaaacaatccaaacagg 553  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  24363560 tgcttatgctagtagataaactcaaataaaacaatccaaacagg 24363517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 401 - 460
Target Start/End: Original strand, 48470046 - 48470105
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||| |||||||||||||||||||| ||||| |||||| ||||||| |||| ||||||||    
T  48470046 taagttgttttcataagctattttgaataacttatgaacataagctcaaaaaagcttatg 48470105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 329 - 443
Target Start/End: Complemental strand, 27481434 - 27481320
Alignment:
Q  329 tataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggat 428  Q
    ||||||| |||||||||||| | ||||| |||| || |||||||   ||||||| | ||| |||||||||| |||| | ||||||||||||||  |||||    
T  27481434 tataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcataagctatcatggat 27481335  T
Q  429 aacatatgaaaataa 443  Q
    | | |||| ||||||    
T  27481334 agcttatggaaataa 27481320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 363 - 421
Target Start/End: Complemental strand, 28340950 - 28340892
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||| ||||  ||||||||| || ||||||||||| |||||||||||||||||||||    
T  28340950 aaagatgaaatgaagtcaaattgttgtcatataagctataagctgttttcataagctat 28340892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 421
Target Start/End: Original strand, 21453247 - 21453316
Alignment:
Q  352 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||||||| |||||||| ||  |||||| || || ||||||||||| ||| |||||||||||||||||    
T  21453247 tttctgtaacaaaagataagataaagtcaagttgttctcatataagctataaactgttttcataagctat 21453316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 809 - 888
Target Start/End: Complemental strand, 29137349 - 29137268
Alignment:
Q  809 aggttggtttggtggctgaagt-agggagttaaggagtgaagtgataagg-ggtcgagggtttgaaccacactcccagcata 888  Q
    ||||||| |||||||||| ||| |||||||||| || || ||| |||||| |||||||||||||| || |||||||||||||    
T  29137349 aggttggattggtggctggagtgagggagttaaagattggagttataaggaggtcgagggtttgatccccactcccagcata 29137268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 363 - 451
Target Start/End: Original strand, 46825062 - 46825151
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga-aaataagctaaaaa 451  Q
    |||||||||||  ||||||||| |||||||||||||  ||| | ||||||||||||||| |||||   | ||||| ||||||||||||||    
T  46825062 aaagataaaataaagtcaaattgttttcatataagccataaaccgttttcataagctatcttggagtgcttatgagaaataagctaaaaa 46825151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 339 - 463
Target Start/End: Original strand, 7623078 - 7623202
Alignment:
Q  339 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaa 438  Q
    |||||||||||| ||| | |||| |||| ||||||  |||| || |||||| ||||||||| |||||| ||||||||| |||| ||| | |   || |||    
T  7623078 tatgtataagttatttttataacaaaaggtaaaataaagtccaactctttttatataagctgtaagctattttcataaactatcttgaagagtttacgaa 7623177  T
Q  439 aataagctaaaaatagcttatggac 463  Q
    ||||||| ||||| | |||||||||    
T  7623178 aataagccaaaaacaacttatggac 7623202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 617
Target Start/End: Original strand, 23214954 - 23215014
Alignment:
Q  557 agtctcattggtctttatgctagtaaataagctcaaataagtcaatctaaacatgccctaa 617  Q
    ||||||||  || |||||||||||| ||||| ||||||||||||||| |||||||| ||||    
T  23214954 agtctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaacatgctctaa 23215014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 363 - 443
Target Start/End: Complemental strand, 30456556 - 30456476
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataa 443  Q
    |||||||||||  ||||||||| |||||||||||| | ||||  |||||||||| |||| ||||| | | |||||||||||    
T  30456556 aaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaataa 30456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 363 - 419
Target Start/End: Original strand, 31002725 - 31002781
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagct 419  Q
    |||||||||||  ||||||| | |||||||||||||| ||||||||||| |||||||    
T  31002725 aaagataaaataaagtcaaaatattttcatataagctataagctgttttgataagct 31002781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 38713258 - 38713202
Alignment:
Q  300 ggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttct 356  Q
    |||||||||||||||||| ||||||||| |||||||  || |||||||||| |||||    
T  38713258 ggataaacaacttaattaagcatttatcttataagtgattgtgtataagttatttct 38713202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 459
Target Start/End: Original strand, 752962 - 753029
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 459  Q
    |||||||| ||||||||||| |||| |||| ||||  | ||||||||||| ||||||||| |||||||    
T  752962 tataagctataagctgttttgataaactatcttggggagcatatgaaaattagctaaaaacagcttat 753029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 22759109 - 22759208
Alignment:
Q  322 tttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||| ||||||  ||||||| |||| | ||| | |||| |||||||||||  ||  ||||| ||||||||||||||  |||||| |||||||||||||    
T  22759109 tttatcatataagcgtttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagctaaaagctgatttcataagctat 22759208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 427
Target Start/End: Original strand, 24909641 - 24909692
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagctattttgga 427  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||| ||||    
T  24909641 agtcaaattattttcatataagctataagttgttttcataagatattgtgga 24909692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 425
Target Start/End: Original strand, 34441028 - 34441115
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttg 425  Q
    ||||||||| ||| || || |||| || ||||||||  ||| ||||| ||| |||||||||| ||| || ||||||||||||||||||    
T  34441028 ttatgtatacgttattcctctaacaaacgataaaataaagttaaattgtttgcatataagctgtaaactattttcataagctattttg 34441115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 444
Target Start/End: Original strand, 43648242 - 43648285
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataag 444  Q
    ||||||||||||||||||||| ||||| || |||||||||||||    
T  43648242 taagctgttttcataagctatcttggagaaaatatgaaaataag 43648285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 451
Target Start/End: Complemental strand, 45790502 - 45790443
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    |||||||| |||| |||||| |||| |||| ||||||||| |||||||||||||| ||||    
T  45790502 tataagctataagttgtttttataaactatattggataacttatgaaaataagctgaaaa 45790443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 421
Target Start/End: Complemental strand, 47046211 - 47046156
Alignment:
Q  366 gataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||||  ||||||||| |||||||||||||||  || ||||||||||||||||    
T  47046211 gataaaataaagtcaaattgttttcatataagctccgagttgttttcataagctat 47046156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 6601369 - 6601431
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    ||||||||||| |||||||||| ||||   | |||||||||||||| | ||||||||||||||    
T  6601369 taagctgtttttataagctattctggagtgcttatgaaaataagctgagaatagcttatggac 6601431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 401 - 459
Target Start/End: Original strand, 33128755 - 33128813
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 459  Q
    |||||||||| ||||| |||| ||||| ||| | ||||||||||||||||| |||||||    
T  33128755 taagctgtttacataaactatattggagaacttgtgaaaataagctaaaaaaagcttat 33128813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 39591593 - 39591539
Alignment:
Q  343 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataag 397  Q
    |||||||| ||||| |||| |||||||||||  ||||||||| ||||||||||||    
T  39591593 tataagttatttctataacaaaagataaaataaagtcaaattgttttcatataag 39591539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 420
Target Start/End: Original strand, 47004010 - 47004108
Alignment:
Q  322 tttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 420  Q
    |||||| ||||||| ||||| | |||| | ||||| |||| | |||||||||  ||||||| | |||| |||| | || ||||||||||||||||||||    
T  47004010 tttatcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaaactatttttatatgaactataagctgttttcataagcta 47004108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 339 - 420
Target Start/End: Complemental strand, 5006639 - 5006558
Alignment:
Q  339 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 420  Q
    |||||||||| | || || |||| |||||||||||  ||||||| | |||||||||||| | |||  |||||||||||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataagcta 5006558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 376 - 421
Target Start/End: Complemental strand, 5369784 - 5369739
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||| | |||||||||| ||| |||||||||||||||||||||    
T  5369784 agtcaaactgttttcatatatgctataagctgttttcataagctat 5369739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 337 - 422
Target Start/End: Original strand, 23918895 - 23918980
Alignment:
Q  337 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    ||||||| |||||| | ||| | || |||||||||||  ||||||||| |||||||||||||| ||| ||||  |||||| |||||    
T  23918895 tttatgtgtaagttatctctattacaaaagataaaataaagtcaaattgttttcatataagctataatctgtaatcataaactatt 23918980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 395 - 444
Target Start/End: Original strand, 33678776 - 33678825
Alignment:
Q  395 aagctctaagctgttttcataagctattttggataacatatgaaaataag 444  Q
    ||||| ||||||||||||||||||||| ||||| ||| | ||||||||||    
T  33678776 aagctataagctgttttcataagctatcttggaaaacttgtgaaaataag 33678825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 571 - 616
Target Start/End: Complemental strand, 34083565 - 34083520
Alignment:
Q  571 ttatgctagtaaataagctcaaataagtcaatctaaacatgcccta 616  Q
    |||||| |||| || |||||||||||||||||| ||||||||||||    
T  34083565 ttatgcaagtagatgagctcaaataagtcaatccaaacatgcccta 34083520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 377 - 422
Target Start/End: Original strand, 39518807 - 39518852
Alignment:
Q  377 gtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||||    
T  39518807 gtcaaattgtttgcatataagctttaagttgttttcataagctatt 39518852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 46280349 - 46280284
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 457  Q
    |||| ||| ||||||||||| ||||||||| ||||| ||| |||||||||| ||| |||| |||||    
T  46280349 tatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaaaagctt 46280284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 376 - 489
Target Start/End: Complemental strand, 46609186 - 46609074
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtt 475  Q
    ||||||| | |||||||||||| | ||||||||| |  |||| |||||| || |   |||| ||||||||| ||||||| |||| ||| |||||| |||     
T  46609186 agtcaaactgttttcatataaggtataagctgttctggtaagttatttttgagagattatggaaataagctgaaaatagtttatagacatgttat-tgtc 46609088  T
Q  476 tgtttctataagct 489  Q
    ||||||||||||||    
T  46609087 tgtttctataagct 46609074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 7e-21; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 323 - 551
Target Start/End: Original strand, 11513825 - 11514047
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    ||||| ||||||  |||||||||||||| || |   ||| |||||||||||  ||||||||| |||||||||||||| |||| ||||||||||||||||     
T  11513825 ttatcatataagggtttatgtataagttattac---aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 11513921  T
Q  423 ttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaat 522  Q
     |||| ||| | || ||||||||| |||||||||||| | | ||  ||     |||||  |||||||||    |||||||| || | ||||||||||| |    
T  11513922 atggagaacttttggaaataagctgaaaatagcttataggcatgccat---gctgttttcataagctctctaaaacagtctcacaagtgcttatgctagt 11514018  T
Q  523 agataagctcaaataaaacaatccaaaca 551  Q
    |||||| |||||||||| |||||||||||    
T  11514019 agataatctcaaataaaccaatccaaaca 11514047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 18066109 - 18066189
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||||| ||| || ||||||||| | |||||||||||||    
T  18066109 aaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatg 18066189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 379 - 475
Target Start/End: Complemental strand, 22681275 - 22681179
Alignment:
Q  379 caaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtt 475  Q
    |||||| |||||||||||||| |||||||||||||||| ||||  | || ||| |||| |||||||||||||| |||||||| || |||||| ||||    
T  22681275 caaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgtt 22681179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 323 - 421
Target Start/End: Original strand, 10143096 - 10143194
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||| ||||||  ||||||||||||| ||||| |||| |||||||||||  ||||||| | |||| ||||||||| |||| | ||||||||||||||    
T  10143096 ttatcgaataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctat 10143194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 386 - 538
Target Start/End: Original strand, 15377752 - 15377903
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagc-taaaaatagcttatggacgtgttatatgtttgtttctat 484  Q
    |||||||||||| | |||||||||||||||||||||| ||   | | ||||||||||| | |||||||||||||||||||||| ||| | ||||||| ||    
T  15377752 ttttcatataagttataagctgttttcataagctattctgaggagcttatgaaaataaacttaaaaatagcttatggacgtgtcataag-ttgtttccat 15377850  T
Q  485 aagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataa 538  Q
     || | |||  ||||| ||||| | |||||||| || || ||||||||||||||    
T  15377851 -agattttccaaacagccttacaattgcttatgttagtacataagctcaaataa 15377903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 18179323 - 18179246
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    |||||||||||||| ||||||| |||||||||||||  |||| ||| || ||||||||||| ||||||||| ||||||    
T  18179323 ttttcatataagctataagctgctttcataagctatcctggagaacttacgaaaataagctgaaaatagctaatggac 18179246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 338 - 417
Target Start/End: Original strand, 2416252 - 2416331
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 417  Q
    ||||||||||||| |||||||| | |||||||||||  ||| ||||| |||| ||||||||| ||||||||||| |||||    
T  2416252 ttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataagctgtttttataag 2416331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 8017415 - 8017477
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 442  Q
    ||||| |||||||||||||| ||| ||||||||||||||||| ||||| ||| ||||||||||    
T  8017415 aaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaaata 8017477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 342 - 447
Target Start/End: Complemental strand, 41875780 - 41875675
Alignment:
Q  342 gtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaat 441  Q
    ||||||| ||||||| |||| |||||||||||   || || || ||||| |||||||| ||||||||||||||||||||| ||||  | | || ||||||    
T  41875780 gtataagctgtttctttaaccaaagataaaatgatgttaagttgttttcgtataagctgtaagctgttttcataagctatcttggtgagcttaagaaaat 41875681  T
Q  442 aagcta 447  Q
    ||||||    
T  41875680 aagcta 41875675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 463
Target Start/End: Complemental strand, 6993830 - 6993730
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 462  Q
    |||||||||||   |||||||| | |||||||||||| || | ||||||||||||||||  | || | | ||||||||||||||||||||  ||||||||    
T  6993830 aaagataaaataaggtcaaattatattcatataagctataggttgttttcataagctatgcttgagagcttatgaaaataagctaaaaatgacttatgga 6993731  T
Q  463 c 463  Q
    |    
T  6993730 c 6993730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 10150657 - 10150729
Alignment:
Q  301 gataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaat 373  Q
    ||||||||||||||||| ||| ||||  ||||||| |||||||||||||| ||||| |||  |||||||||||    
T  10150657 gataaacaacttaattaagcacttattatataagtgtttatgtataagttatttctataataaaagataaaat 10150729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 29643509 - 29643465
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagcta 420  Q
    |||||||||  ||||||||||||||||||||||||||||||||||    
T  29643509 agtcaaattactttcatataagctctaagctgttttcataagcta 29643465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 451
Target Start/End: Original strand, 42457912 - 42458000
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    |||||||||||  ||| ||||| ||||  | |||||||| |||||| |||||||||||| || || |||||||||||||||||| ||||    
T  42457912 aaagataaaataaagttaaattgtttttgtttaagctcttagctgtattcataagctatcttagagaacatatgaaaataagctgaaaa 42458000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 571 - 618
Target Start/End: Original strand, 2416426 - 2416473
Alignment:
Q  571 ttatgctagtaaataagctcaaataagtcaatctaaacatgccctaat 618  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  2416426 ttatgttagtagataaactcaaataagtcaatctaaacatgccctaat 2416473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 421
Target Start/End: Complemental strand, 17952832 - 17952749
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||| |||||| | ||||| |||| |||||||||||  ||||||| | ||||||||||||||  ||| ||||||||||||||||    
T  17952832 ttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctat 17952749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 417
Target Start/End: Complemental strand, 35755645 - 35755554
Alignment:
Q  326 tcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 417  Q
    |||||||||| |||||||||||| | ||||| |||  ||| | |||||  ||||||||| ||||||| |||||| |||| ||||||||||||    
T  35755645 tcgtataagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttgttttcataag 35755554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 363 - 457
Target Start/End: Complemental strand, 12464579 - 12464485
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 457  Q
    |||||||||||  ||| ||||| ||||  |||| ||| |||||| |||||||||||||| ||||| ||| | |||||||||||| |||| |||||    
T  12464579 aaagataaaataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagctt 12464485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 496 - 554
Target Start/End: Complemental strand, 15370297 - 15370239
Alignment:
Q  496 aacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacaggc 554  Q
    |||||||| || ||||||||||| | |||||||||||||||||  ||||||||||||||    
T  15370297 aacagtctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaacaggc 15370239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 438 - 552
Target Start/End: Original strand, 32821848 - 32821961
Alignment:
Q  438 aaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaata 537  Q
    |||||| || |||| ||||||||||| ||| ||| ||| |||||||||| ||||||  ||||||||| | |||||||| | |  ||||||||||||||||    
T  32821848 aaataaactgaaaacagcttatggacatgtcataagtt-gtttctataaactcttccaaacagtcttgcaaatgcttacgttggtagataagctcaaata 32821946  T
Q  538 aaacaatccaaacag 552  Q
    |  ||||| ||||||    
T  32821947 agtcaatctaaacag 32821961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 350 - 460
Target Start/End: Original strand, 36043855 - 36043965
Alignment:
Q  350 tgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaa 449  Q
    ||||||| || | ||||||||||| |||| ||||| ||||| |||||||| ||| |||| ||||| || ||| ||||| | | ||||||| | |||||||    
T  36043855 tgtttctatagcgaaagataaaattgagttaaattgttttcgtataagctataaactgtcttcattagttatcttggagagcttatgaaattgagctaaa 36043954  T
Q  450 aatagcttatg 460  Q
    || ||||||||    
T  36043955 aacagcttatg 36043965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 444
Target Start/End: Complemental strand, 656903 - 656802
Alignment:
Q  343 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 442  Q
    |||||| | ||||| |||| |||||||||||  | ||||||| ||||| |||||||| |||| || ||||||||||||| ||| | | | ||||||||||    
T  656903 tataagctatttctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaata 656804  T
Q  443 ag 444  Q
    ||    
T  656803 ag 656802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 3423914 - 3423841
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataa 396  Q
    ||||| || |||| |||||||||||||| ||| |||| | |||||||||||  ||||||||| |||||||||||    
T  3423914 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 3423841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 394 - 447
Target Start/End: Complemental strand, 6167358 - 6167305
Alignment:
Q  394 taagctctaagctgttttcataagctattttggataacatatgaaaataagcta 447  Q
    |||||| ||||||||||| ||||||||||||||| ||| |||| ||||||||||    
T  6167358 taagctataagctgtttttataagctattttggagaacttatggaaataagcta 6167305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 417
Target Start/End: Complemental strand, 23143107 - 23143030
Alignment:
Q  340 atgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 417  Q
    ||||||||| | ||| |||||| |||||||||||| | ||||||| ||||| |||||||| | || ||||||||||||    
T  23143107 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttgttttcataag 23143030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 417
Target Start/End: Complemental strand, 23554897 - 23554820
Alignment:
Q  340 atgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 417  Q
    ||||||||| | ||| |||||| |||||||||||| | ||||||| ||||| |||||||| | || ||||||||||||    
T  23554897 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttgttttcataag 23554820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 25800810 - 25800851
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  25800810 aaattgttttcatataagctataagctgttttcataagctat 25800851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 459
Target Start/End: Original strand, 39983329 - 39983402
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 459  Q
    |||||||||||||| |||| ||||||||||||||||  |||| | |  |||||||||| || ||||||||||||    
T  39983329 ttttcatataagctataagttgttttcataagctatcctggagagctaatgaaaataaactgaaaatagcttat 39983402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 363 - 459
Target Start/End: Original strand, 9395094 - 9395190
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 459  Q
    |||||||||||  ||  ||||| ||||||||||| || |||||||||||||| || |||| || | | | |||||||||||||| |||| |||||||    
T  9395094 aaagataaaataaagctaaattgttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaataagctgaaaacagcttat 9395190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 401 - 453
Target Start/End: Complemental strand, 26143708 - 26143656
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaata 453  Q
    ||||||||||||||||||||  ||||| ||| |||||||||||||| ||||||    
T  26143708 taagctgttttcataagctaacttggagaacttatgaaaataagctgaaaata 26143656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 26626854 - 26626934
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||| ||||| ||||||||  |||||||||||||||||||| ||| | ||| ||||||||||| || |||| || |||||    
T  26626854 aaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatg 26626934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 364 - 460
Target Start/End: Complemental strand, 28039437 - 28039341
Alignment:
Q  364 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||||||||  |||| |||| ||||||||||| || |||||  |||||||||||| | ||||| ||  |||| ||||||||| |||| ||||||||    
T  28039437 aagataaaataaagtccaattgttttcatataaactataagcaattttcataagctttcttggaaaagttatggaaataagctgaaaacagcttatg 28039341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 380 - 460
Target Start/End: Complemental strand, 29316864 - 29316784
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||| |||||| |||| || |||||||||||||| |||||| ||||| ||| |||| ||||||||| |||| | ||||||    
T  29316864 aaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatg 29316784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 507 - 555
Target Start/End: Original strand, 33503105 - 33503153
Alignment:
Q  507 caatgcttatgctaatagataagctcaaataaaacaatccaaacaggct 555  Q
    |||||||||||||| |||||||||||||||||  |||| ||||||||||    
T  33503105 caatgcttatgctagtagataagctcaaataagccaatacaaacaggct 33503153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 392 - 460
Target Start/End: Original strand, 40279190 - 40279258
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||| | |||| |||||||||||||||| ||||| ||| ||||||||| |||| ||||||| |||||    
T  40279190 tataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatg 40279258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 680484 - 680555
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    ||||| ||||| |||||||| |||||| |||||||||||||| ||| | ||| | |||||||||||| ||||    
T  680484 aaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaa 680555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 460
Target Start/End: Original strand, 3611232 - 3611287
Alignment:
Q  405 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||||||||| || |||||    
T  3611232 ctgttttcacaagctatcttggagaacttatgaaaataagctaaaaacagtttatg 3611287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 462
Target Start/End: Complemental strand, 7103588 - 7103489
Alignment:
Q  364 aagataaaatcgagtcaaattcttttcatataagctctaagctg-ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 462  Q
    ||||||||||  ||||||| | |||| ||||||||| ||||||| |||||||||||||| || || |   | ||||||||||||||||| | ||||||||    
T  7103588 aagataaaataaagtcaaactgttttaatataagctataagctgtttttcataagctatcttagagagtttgtgaaaataagctaaaaacaacttatgga 7103489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 460
Target Start/End: Original strand, 9174817 - 9174876
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||||||||||||||||||| ||  | | | |||||||||||||| |||||||||||||    
T  9174817 taagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatg 9174876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 574 - 609
Target Start/End: Original strand, 9395245 - 9395280
Alignment:
Q  574 tgctagtaaataagctcaaataagtcaatctaaaca 609  Q
    |||||||||||||||||||||||||||||| |||||    
T  9395245 tgctagtaaataagctcaaataagtcaatccaaaca 9395280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 14302918 - 14302961
Alignment:
Q  496 aacagtcttaccaatgcttatgctaatagataagctcaaataaa 539  Q
    |||||||| || |||| |||||||||||||||||||||||||||    
T  14302918 aacagtctcacaaatgtttatgctaatagataagctcaaataaa 14302961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 427
Target Start/End: Complemental strand, 33931647 - 33931612
Alignment:
Q  392 tataagctctaagctgttttcataagctattttgga 427  Q
    |||||||| |||||||||||||||||||||||||||    
T  33931647 tataagctataagctgttttcataagctattttgga 33931612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 42592303 - 42592358
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagc 418  Q
    |||||||||||  ||| || || |||||||||||||| ||||||||||||||||||    
T  42592303 aaagataaaattaagttaacttgttttcatataagctataagctgttttcataagc 42592358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 451
Target Start/End: Complemental strand, 42621452 - 42621393
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    |||||||| ||||||||||||||||| |||| |||| ||| | |||||||||||| ||||    
T  42621452 tataagctataagctgttttcataagttattctggagaacttgtgaaaataagctgaaaa 42621393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 421
Target Start/End: Complemental strand, 5043666 - 5043608
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||||||||  ||||||| | ||||||||||||||  ||| ||||||||||||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttgttttcataagctat 5043608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 583 - 617
Target Start/End: Complemental strand, 6772478 - 6772444
Alignment:
Q  583 ataagctcaaataagtcaatctaaacatgccctaa 617  Q
    ||||||||||||||||||||| |||||||||||||    
T  6772478 ataagctcaaataagtcaatccaaacatgccctaa 6772444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 421
Target Start/End: Original strand, 9478223 - 9478321
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||| ||||||| |||||||||||| | ||||| ||||   |||||||||  | ||||| | |||||||||||||| || ||||| ||| ||||||||    
T  9478223 ttatcatataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctatatgctgtgttcgtaagctat 9478321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 510 - 552
Target Start/End: Original strand, 10285970 - 10286012
Alignment:
Q  510 tgcttatgctaatagataagctcaaataaaacaatccaaacag 552  Q
    ||||||||| |||||||||||| |||||| |||||||||||||    
T  10285970 tgcttatgcaaatagataagcttaaataagacaatccaaacag 10286012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 405 - 459
Target Start/End: Complemental strand, 33319876 - 33319822
Alignment:
Q  405 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 459  Q
    |||||||||||| |||| ||||| ||| |||||||||||||| |||| |||||||    
T  33319876 ctgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttat 33319822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 571 - 617
Target Start/End: Complemental strand, 35378489 - 35378443
Alignment:
Q  571 ttatgctagtaaataagctcaaataagtcaatctaaacatgccctaa 617  Q
    |||||||| || ||||||||||||||| ||||| |||||||||||||    
T  35378489 ttatgctattatataagctcaaataagccaatccaaacatgccctaa 35378443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 571 - 609
Target Start/End: Complemental strand, 37448734 - 37448696
Alignment:
Q  571 ttatgctagtaaataagctcaaataagtcaatctaaaca 609  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  37448734 ttatgctggtagataagctcaaataagtcaatctaaaca 37448696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 40279409 - 40279471
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    |||| |||||||||||||||| ||||| ||| |||||||||||| | |||| || ||||||||    
T  40279409 taagttgttttcataagctatattggagaacttatgaaaataagttgaaaacagtttatggac 40279471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 421
Target Start/End: Original strand, 43141835 - 43141893
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||||| |  ||||||||| ||| |||||||||| |||| ||||||||||||||||    
T  43141835 aaagataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctat 43141893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 395 - 460
Target Start/End: Complemental strand, 1893355 - 1893290
Alignment:
Q  395 aagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||| ||||||||||||  ||||||| ||||| ||| | |||||||||||| |||||| ||||||    
T  1893355 aagctataagctgttttcggaagctatcttggagaacttgtgaaaataagctgaaaataacttatg 1893290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 1939458 - 1939338
Alignment:
Q  343 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatata-agctctaagctgttttcataagctattttggataacatatgaaaat 441  Q
    |||||||| ||||| |||| |||||||||||  ||| ||| | |||||||||  |||| ||| |||||||||||||||||  |||| | | |||| ||||    
T  1939458 tataagttatttctataacaaaagataaaataaagtgaaactattttcatattgagctataa-ctgttttcataagctatactggagagcttatggaaat 1939360  T
Q  442 aagctaaaaatagcttatggac 463  Q
    ||| | |||| |||||||||||    
T  1939359 aagttgaaaacagcttatggac 1939338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 363 - 444
Target Start/End: Complemental strand, 10646395 - 10646314
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 444  Q
    |||||||||||  ||||||||| ||||| |||||  | | |||  ||||||||||||||||| || ||| ||||||||||||    
T  10646395 aaagataaaataaagtcaaattattttcctataaattttgagcccttttcataagctattttagagaacttatgaaaataag 10646314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 378 - 443
Target Start/End: Complemental strand, 13869186 - 13869121
Alignment:
Q  378 tcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataa 443  Q
    ||||||| ||||||| |||||| ||||||||||||||||| |||  |||| |||  ||||||||||    
T  13869186 tcaaattattttcatctaagctataagctgttttcataagttatcctggagaactaatgaaaataa 13869121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 386 - 427
Target Start/End: Original strand, 16353848 - 16353889
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttgga 427  Q
    |||||||||||||| ||||||||||| ||||||||| |||||    
T  16353848 ttttcatataagctataagctgtttttataagctatcttgga 16353889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 16398116 - 16398173
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 458  Q
    |||||| |||||||||| ||| ||||| ||| |||||||||||||| |||| ||||||    
T  16398116 taagctattttcataagttatgttggagaacttatgaaaataagctgaaaacagctta 16398173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 340 - 421
Target Start/End: Original strand, 28933765 - 28933846
Alignment:
Q  340 atgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||||| | ||| | |||| |||||||||||| | ||||||| ||||||| |||| | |||  ||||||||||||||||    
T  28933765 atgtataagctatttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcataagctat 28933846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 31740076 - 31740019
Alignment:
Q  352 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgtt 409  Q
    ||||| ||||||||||||||||  ||||||| | |||||||||||||| |||| ||||    
T  31740076 tttctataactaaagataaaataaagtcaaactattttcatataagctataagttgtt 31740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 34339845 - 34339961
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt-ttggataacatatg 436  Q
    |||||| |||||||||| |  ||| |||||||||||  ||||||||| ||||| |||||| | ||| || |||||||||| |||| ||||| | | || |    
T  34339845 ttatgtgtaagttgtttttaaaacaaaagataaaataaagtcaaattattttcgtataaggtataaactattttcataag-tattcttggagagcttaag 34339943  T
Q  437 aaaataagctaaaaatag 454  Q
    |||||||||| |||||||    
T  34339944 aaaataagctgaaaatag 34339961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 408 - 489
Target Start/End: Complemental strand, 34652097 - 34652017
Alignment:
Q  408 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagct 489  Q
    |||||||||||||| ||||| | | |||| ||||||| | |||| ||||||||||| ||| ||| | |||||||||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataag-ttgtttctataagct 34652017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 403 - 460
Target Start/End: Complemental strand, 35378598 - 35378541
Alignment:
Q  403 agctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||||||| ||||| || ||||||| | |||||||||||||| |||||| ||||||    
T  35378598 agctgttttcgtaagcaatcttggatagcttatgaaaataagctgaaaataacttatg 35378541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 331 - 444
Target Start/End: Complemental strand, 36863762 - 36863650
Alignment:
Q  331 taagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataa 430  Q
    ||||||||||| || ||||||||||| ||   |||||||||||  |||||||   |||| ||||||| | |||  |||||||||||||||| ||||| |     
T  36863762 taagtttttat-tagaagttgtttctctagtaaaagataaaataaagtcaaacaatttttatataagttataaattgttttcataagctatcttggagag 36863664  T
Q  431 catatgaaaataag 444  Q
    | ||||||||||||    
T  36863663 cttatgaaaataag 36863650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 451
Target Start/End: Complemental strand, 42817523 - 42817394
Alignment:
Q  322 tttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||| ||||||| || || |||| ||| ||||| || | |||||||||||  ||||||  | ||||||||||||   ||| |||||||||||||||||    
T  42817523 tttatcatataagtgttgatttatatgttatttctataccaaaagataaaatgaagtcaagctgttttcatataagtaataaactgttttcataagctat 42817424  T
Q  422 tttggataacatatgaaaataagctaaaaa 451  Q
    | || | | | |||| || |||||||||||    
T  42817423 tctgaagagcttatggaagtaagctaaaaa 42817394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 4e-19; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 405 - 538
Target Start/End: Original strand, 37273140 - 37273272
Alignment:
Q  405 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtctt 504  Q
    ||||||||||||||||| ||||| ||| |||| ||||||| | |||| | ||||||||| ||| ||| ||| ||||| ||||||||| |  ||||||||     
T  37273140 ctgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagtt-gtttccataagctctcccaaacagtctc 37273238  T
Q  505 accaatgcttatgctaatagataagctcaaataa 538  Q
    |||| |||||||||||||| ||||| ||||||||    
T  37273239 accagtgcttatgctaataaataagttcaaataa 37273272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 330 - 460
Target Start/End: Complemental strand, 36783474 - 36783343
Alignment:
Q  330 ataagtttttatgtataa-gttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggat 428  Q
    |||||| ||||||||||| | | ||||| || | |||||||||||  ||| ||||| ||||||||||| || | ||||||||||||||||||| |||||     
T  36783474 ataagtgtttatgtataaagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctatattggag 36783375  T
Q  429 aacatatgaaaataagctaaaaatagcttatg 460  Q
     |  |||||| ||||||| |||| ||||||||    
T  36783374 caattatgaatataagctgaaaacagcttatg 36783343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 408 - 555
Target Start/End: Original strand, 45541580 - 45541726
Alignment:
Q  408 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttacc 507  Q
    |||||||||||||| ||||||||| ||||| ||||| || |||| |||||||| || ||| ||| |  |||||  ||||| |||||  |||||||||||     
T  45541580 ttttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataag-ctgttttcataagttcttctaaacagtcttaca 45541678  T
Q  508 aatgcttatgctaatagataagctcaaataaaacaatccaaacaggct 555  Q
    | || |||| | | || ||||||||||||||  |||||||||||||||    
T  45541679 agtgtttataccattaaataagctcaaataagtcaatccaaacaggct 45541726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 421
Target Start/End: Original strand, 38462205 - 38462303
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||| ||||||| ||||| |||||| | ||||| || | |||||||||||  ||||||| | |||||||||| ||| ||| |||||||||||||||||    
T  38462205 ttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctat 38462303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 339 - 416
Target Start/End: Original strand, 1395611 - 1395688
Alignment:
Q  339 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataa 416  Q
    |||||||||| | ||||| |||| |||||||||||  ||||||||| |||||||||||||| | | ||||||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctatgaactgttttcataa 1395688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 378 - 551
Target Start/End: Original strand, 2923457 - 2923629
Alignment:
Q  378 tcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttg 477  Q
    |||||||  |||||| |||||| ||||||||||||||||||||   || | |   |||  |||||||||||||||| ||||||||| |||  || ||| |    
T  2923457 tcaaattgctttcatgtaagctataagctgttttcataagctacactgaagagattatataaataagctaaaaataacttatggacatgtagtaagtt-g 2923555  T
Q  478 tttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 551  Q
    |||||||||| |||||  ||||||||| | | | ||||||  ||||||||||||| |||||  |||||| ||||    
T  2923556 tttctataagttcttccaaacagtctttcaagtacttatgtcaatagataagctcgaataagtcaatccgaaca 2923629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 343 - 460
Target Start/End: Complemental strand, 32095317 - 32095200
Alignment:
Q  343 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 442  Q
    |||||||| ||||| |||| |||||||||||  ||| ||||| ||||  ||||| || ||||| |||||||||| |||| ||| | |||  || ||||||    
T  32095317 tataagttatttctataacaaaagataaaattaagttaaattgtttttgtataaactataagccgttttcataatctatcttgaaaaactaataaaaata 32095218  T
Q  443 agctaaaaatagcttatg 460  Q
    |||||||| |||||||||    
T  32095217 agctaaaattagcttatg 32095200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 552
Target Start/End: Complemental strand, 25459624 - 25459548
Alignment:
Q  476 tgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacag 552  Q
    ||||||| ||||||||||  |||| ||| || | ||||||||||| | |||||||||||||||| ||||||||||||    
T  25459624 tgtttctctaagctcttccaaacaatctcacaagtgcttatgctagttgataagctcaaataaatcaatccaaacag 25459548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 406 - 474
Target Start/End: Complemental strand, 33972797 - 33972729
Alignment:
Q  406 tgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgt 474  Q
    |||||| ||||||||||||||| ||| | |||||||||||| |||| || |||||||| ||||||||||    
T  33972797 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaaaggttatggacatgttatatgt 33972729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 37788794 - 37788884
Alignment:
Q  332 aagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattt 423  Q
    |||| |||||||||||||| ||| | |||| |||||||||||  |||| |||| ||||| ||||| || |||| ||||||||||||||||||    
T  37788794 aagtgtttatgtataagttattt-tataacaaaagataaaataaagtccaattattttcgtataatctataagttgttttcataagctattt 37788884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 392 - 459
Target Start/End: Complemental strand, 44747485 - 44747418
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 459  Q
    |||| ||| ||||||||||||||||||||| ||||| ||| |||||||||||||| |||  |||||||    
T  44747485 tataggctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaaagaagcttat 44747418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 50600254 - 50600191
Alignment:
Q  393 ataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagct 456  Q
    ||||||| |||||||||||||| |||||| ||||| ||| |||||||||||||| |||| ||||    
T  50600254 ataagctataagctgttttcatcagctatattggagaacttatgaaaataagctgaaaacagct 50600191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 408 - 458
Target Start/End: Original strand, 466202 - 466252
Alignment:
Q  408 ttttcataagctattttggataacatatgaaaataagctaaaaatagctta 458  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||| ||||||    
T  466202 ttttcataagctatgttggagaacttatgaaaataagctaaaaaaagctta 466252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 363 - 429
Target Start/End: Original strand, 2201092 - 2201158
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggata 429  Q
    ||||||||||   ||||||| | |||||||||||||| |||||||||||||| |||||| |||||||    
T  2201092 aaagataaaacaaagtcaaactgttttcatataagctataagctgttttcattagctatcttggata 2201158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 364 - 446
Target Start/End: Original strand, 14145877 - 14145959
Alignment:
Q  364 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 446  Q
    ||||||||||  ||| ||||| ||||| |||| ||| |||| | |||||||||||||| |||||| || ||||||||||||||    
T  14145877 aagataaaataaagttaaattgttttcgtatatgctataagttattttcataagctatcttggattacttatgaaaataagct 14145959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 300 - 426
Target Start/End: Complemental strand, 24235852 - 24235726
Alignment:
Q  300 ggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagct 399  Q
    |||||||||||||||||| |  |||||   |||||   || |||||||||| ||||| |||| |||||||| ||  ||||||| | |||  |||||||||    
T  24235852 ggataaacaacttaattaagtgtttataacataagcacttgtgtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagct 24235753  T
Q  400 ctaagctgttttcataagctattttgg 426  Q
     |||| |||||||||||||||| ||||    
T  24235752 ataagttgttttcataagctatattgg 24235726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 394 - 463
Target Start/End: Original strand, 2719463 - 2719532
Alignment:
Q  394 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    |||||| ||| ||||||||||||||||| ||||| ||| |||||||||||||| | || | |||||||||    
T  2719463 taagctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggac 2719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 413 - 554
Target Start/End: Complemental strand, 4534431 - 4534291
Alignment:
Q  413 ataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgc 512  Q
    ||||||||||||||| | | ||   |||||||||||||  | |||| | |||||||||| ||| |||||||||| |||| |  || ||| |||| |  ||    
T  4534431 ataagctattttggagaccttacagaaataagctaaaatcaacttacgaacgtgttataagtt-gtttctataacctctaccaaatagttttacaagggc 4534333  T
Q  513 ttatgctaatagataagctcaaataaaacaatccaaacaggc 554  Q
    |||||  |||||||||||||||||||| ||||| ||||||||    
T  4534332 ttatgtgaatagataagctcaaataaatcaatcgaaacaggc 4534291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 21367648 - 21367725
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 457  Q
    ||||| ||||| |||||  | |||| |||||||||||||||| ||||| ||| |||||||||||||| |||| |||||    
T  21367648 aaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagctt 21367725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 33405250 - 33405197
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaa 439  Q
    |||||||||||||| ||||||||||||||||||||| ||| | ||| |||||||    
T  33405250 ttttcatataagctataagctgttttcataagctatcttgaagaacttatgaaa 33405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 462
Target Start/End: Complemental strand, 34254936 - 34254815
Alignment:
Q  342 gtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttc-atataagctctaagctgttttcataagctattttggataacatatgaaaa 440  Q
    ||||||| | |||||||| | || ||||||||  ||||||| | ||||  |||| |||| ||| || ||||||||||||||| |||| ||| |||| |||    
T  34254936 gtataagctatttctgtagcaaatgataaaataaagtcaaactgttttttatattagctataaactattttcataagctattctggagaacttatgtaaa 34254837  T
Q  441 taagctaaaaatagcttatgga 462  Q
    |||||| ||| |||||||||||    
T  34254836 taagctgaaagtagcttatgga 34254815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 41159010 - 41159083
Alignment:
Q  300 ggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaat 373  Q
    |||||| |||||||||||  |  |||||||||||||  ||||||||||||| || || ||||||||||||||||    
T  41159010 ggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaat 41159083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 419
Target Start/End: Complemental strand, 43116575 - 43116478
Alignment:
Q  322 tttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagct 419  Q
    |||||| || |||| ||||||| |||| | ||||| |||| |||||||||||| | |||||   |||||||||||||| ||||  |||||||||||||    
T  43116575 tttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataagtcgttttcataagct 43116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 513 - 554
Target Start/End: Original strand, 51929854 - 51929895
Alignment:
Q  513 ttatgctaatagataagctcaaataaaacaatccaaacaggc 554  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  51929854 ttatgctaatagataagctcaaataagtcaatccaaacaggc 51929895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 342 - 469
Target Start/End: Complemental strand, 21862303 - 21862175
Alignment:
Q  342 gtataagttgtttctgtaactaaagataaaat-cgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaa 440  Q
    ||||||| ||||||| | || ||||||||||| | ||||||||| |||||||||||||| | ||  ||| |||| |||||| | ||| | | |||| |||    
T  21862303 gtataagctgtttctattacaaaagataaaatacaagtcaaattgttttcatataagctatgagtagttctcattagctatctgggagagcttatggaaa 21862204  T
Q  441 taagctaaaaatagcttatggacgtgtta 469  Q
    |||||| |||| | ||||||||| |||||    
T  21862203 taagctgaaaacaacttatggacatgtta 21862175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 380 - 460
Target Start/End: Original strand, 52618984 - 52619064
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||| |||||||||||| | ||||||||||||| ||||||| ||| | | | | |||||||||| | |||||||||||||    
T  52618984 aaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatg 52619064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 444
Target Start/End: Original strand, 5436241 - 5436304
Alignment:
Q  381 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 444  Q
    |||| |||||||||||| | || ||||||||||||  |||| ||||| ||||||||||||||||    
T  5436241 aattgttttcatataagttgtatgctgttttcatagactatcttggagaacatatgaaaataag 5436304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 408 - 463
Target Start/End: Complemental strand, 16790439 - 16790384
Alignment:
Q  408 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    |||||||||||||| ||||||| | ||||||||||| || |||| |||||||||||    
T  16790439 ttttcataagctatcttggatagcttatgaaaataaactgaaaacagcttatggac 16790384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 23952230 - 23952159
Alignment:
Q  345 taagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataa 416  Q
    |||||| ||||| |||| |||||||||||  ||||||| | ||||  |||||||| ||||||||||||||||    
T  23952230 taagttatttctataacaaaagataaaattaagtcaaagtatttttgtataagctgtaagctgttttcataa 23952159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 358 - 425
Target Start/End: Complemental strand, 37689495 - 37689428
Alignment:
Q  358 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttg 425  Q
    |||| ||||||||| |  ||| ||||| |||||||||||||| ||| || ||||||||||||||||||    
T  37689495 taacaaaagataaagtaaagttaaattattttcatataagctataaactattttcataagctattttg 37689428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 40122899 - 40122801
Alignment:
Q  322 tttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||||||| |||  ||||||||||| | ||||  |||| |||||||||||  ||||||| | |||||||| ||||| |||| |||||| |||||||||    
T  40122899 tttatcgtatcagtacttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttgtttttataagctat 40122801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 551
Target Start/End: Original strand, 41633362 - 41633509
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacag 500  Q
    |||||||||||||| |||||||||||| | | |||||||||||||| |||| |  |||| ||| ||| ||   ||||||| ||||| |||| | ||| ||    
T  41633362 taagctgttttcatcagctattttggagagcttatgaaaataagctgaaaacaatttatagacatgtcat-gatttgtttttataacctctcctgaatag 41633460  T
Q  501 tcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 551  Q
    ||| |  | ||  | ||| |||||||||||||||||||| |||||||||||    
T  41633461 tctcataagtg--tttgccaatagataagctcaaataaaccaatccaaaca 41633509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 401 - 471
Target Start/End: Complemental strand, 2128326 - 2128256
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttata 471  Q
    |||||||||||||||||| || ||  | ||| |||||||||||||| |||| |||||||| || |||||||    
T  2128326 taagctgttttcataagccatcttttagaacgtatgaaaataagctgaaaacagcttatgaacatgttata 2128256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 418
Target Start/End: Complemental strand, 10101601 - 10101527
Alignment:
Q  344 ataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagc 418  Q
    ||||||| ||||| |||| |||||||||||  ||| ||||| |||||||||||| |  ||| |||||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10101527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 418
Target Start/End: Complemental strand, 10212526 - 10212452
Alignment:
Q  344 ataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagc 418  Q
    ||||||| ||||| |||| |||||||||||  ||| ||||| |||||||||||| |  ||| |||||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10212452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 23315591 - 23315649
Alignment:
Q  364 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    ||||||||||  ||||||||| |||||||||| ||| |||| ||||| |||||||||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataagatgtttccataagctatt 23315649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 421
Target Start/End: Complemental strand, 24887409 - 24887331
Alignment:
Q  343 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||| | ||||| |||| | |||||||||  ||||||| | | ||||||||||||  ||||||||||||||||||||    
T  24887409 tataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctat 24887331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 394 - 460
Target Start/End: Complemental strand, 28622074 - 28622008
Alignment:
Q  394 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||| |||||||||||||||| |||| || || ||| ||||||||||| || |||| ||||||||    
T  28622074 taagctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatg 28622008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 402 - 444
Target Start/End: Original strand, 32582747 - 32582789
Alignment:
Q  402 aagctgttttcataagctattttggataacatatgaaaataag 444  Q
    |||||||||||||||||||||||||| ||| |||| |||||||    
T  32582747 aagctgttttcataagctattttggagaacttatggaaataag 32582789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 420
Target Start/End: Complemental strand, 48365010 - 48364928
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 420  Q
    ||||||||||||| ||||  |||| |||||||||||  ||||||||| ||||||| || ||  |||| ||||||||| |||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcatttacgccataagttgttttcattagcta 48364928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 571 - 613
Target Start/End: Original strand, 50760704 - 50760746
Alignment:
Q  571 ttatgctagtaaataagctcaaataagtcaatctaaacatgcc 613  Q
    ||||||| ||| || ||||||||||||||||||||||||||||    
T  50760704 ttatgcttgtagatgagctcaaataagtcaatctaaacatgcc 50760746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 584159 - 584196
Alignment:
Q  571 ttatgctagtaaataagctcaaataagtcaatctaaac 608  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  584159 ttatgctagtagataagctcaaataagtcaatccaaac 584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 580 - 609
Target Start/End: Complemental strand, 9832703 - 9832674
Alignment:
Q  580 taaataagctcaaataagtcaatctaaaca 609  Q
    ||||||||||||||||||||||||||||||    
T  9832703 taaataagctcaaataagtcaatctaaaca 9832674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 386 - 451
Target Start/End: Complemental strand, 14548804 - 14548739
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    |||||||||||||| |||| |||||||||||| |||| |||| | | |||| ||||||||| ||||    
T  14548804 ttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaa 14548739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 386 - 427
Target Start/End: Original strand, 21865563 - 21865604
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttgga 427  Q
    |||||||||||||| |||| |||||| |||||||||||||||    
T  21865563 ttttcatataagctataagttgttttgataagctattttgga 21865604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 25183071 - 25182994
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct-aaaaatagcttatgga 462  Q
    ||||||||| |||| |||||||||||||||||||||  |||| ||  | || ||||| ||| ||||||||||||||||    
T  25183071 ttttcatatgagctataagctgttttcataagctatcatggaaaatttgtggaaatatgctgaaaaatagcttatgga 25182994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 457
Target Start/End: Original strand, 30443886 - 30443951
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 457  Q
    |||| ||| ||||||||||| |||| |||| ||||| ||| |||||||||||||| |||| |||||    
T  30443886 tatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagctt 30443951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 363 - 443
Target Start/End: Complemental strand, 46886796 - 46886718
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataa 443  Q
    |||||||||||  ||| ||||| ||||  ||| |||| ||||||||||||||||||||| ||||| ||| | |||||||||    
T  46886796 aaagataaaat--agttaaattatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataa 46886718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 570 - 607
Target Start/End: Complemental strand, 48364871 - 48364834
Alignment:
Q  570 tttatgctagtaaataagctcaaataagtcaatctaaa 607  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  48364871 tttatactagtaaataaactcaaataagtcaatctaaa 48364834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 570 - 607
Target Start/End: Original strand, 48807811 - 48807848
Alignment:
Q  570 tttatgctagtaaataagctcaaataagtcaatctaaa 607  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  48807811 tttatgctagtaaataagcttaaataactcaatctaaa 48807848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 513 - 554
Target Start/End: Complemental strand, 53762351 - 53762310
Alignment:
Q  513 ttatgctaatagataagctcaaataaaacaatccaaacaggc 554  Q
    |||||||| |||||||||||||||||| |||||||| |||||    
T  53762351 ttatgctagtagataagctcaaataaaccaatccaagcaggc 53762310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 4e-19; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 4622040 - 4622157
Alignment:
Q  346 aagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagc 445  Q
    ||||| ||||| |||| |||||| ||||  | ||||| |||||||||||||||| |||||||||| |||| ||||| ||||| | | | |||||||||||    
T  4622040 aagttatttctataacaaaagatcaaatgaattcaaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagc 4622139  T
Q  446 taaaaatagcttatggac 463  Q
    |||||| |||||||||||    
T  4622140 taaaaacagcttatggac 4622157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 322 - 463
Target Start/End: Complemental strand, 44032146 - 44032005
Alignment:
Q  322 tttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||| ||||||| ||||||||||||  |||||| |||| |||| ||||||  ||||||||| |||||||||||||| ||| || ||||| |||| |||    
T  44032146 tttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttcttaagttat 44032047  T
Q  422 tttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
     ||| | | | |||| |||| |||| ||||||||||||||||    
T  44032046 cttgaagagcttatggaaattagctgaaaatagcttatggac 44032005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 341 - 420
Target Start/End: Original strand, 49517012 - 49517091
Alignment:
Q  341 tgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 420  Q
    |||||||||| ||||| |||| |||||||||||  ||||||||| ||||||| |||||| ||||||||||||||||||||    
T  49517012 tgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 337 - 422
Target Start/End: Complemental strand, 48830208 - 48830123
Alignment:
Q  337 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    |||||||||||||| ||||| | || |||||||||||  ||||||| | |||||||||||||| ||| ||||||||||||||||||    
T  48830208 tttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttcataagctatt 48830123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 367 - 460
Target Start/End: Original strand, 9656618 - 9656711
Alignment:
Q  367 ataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||||  ||| ||||| |||||||||||||| |||||||| ||||||||||||  ||||| |  |||||||||||||| |||| ||||||||    
T  9656618 ataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggatgaattatgaaaataagctcaaaacagcttatg 9656711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 392 - 460
Target Start/End: Complemental strand, 7137075 - 7137007
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||| || ||||||||||||||||||||| ||||| ||| |||||||||||||| |||||| ||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatg 7137007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 363 - 467
Target Start/End: Complemental strand, 7218180 - 7218076
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 462  Q
    |||| ||||||  ||||||||| |||||||||||||| |||| ||||||||||| ||||  |||| ||| |||||||||||| | |||| ||||| || |    
T  7218180 aaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaa 7218081  T
Q  463 cgtgt 467  Q
    |||||    
T  7218080 cgtgt 7218076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 363 - 538
Target Start/End: Complemental strand, 31517846 - 31517672
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 462  Q
    |||||||||||  ||| |||||  ||||||||||||| |||||||| ||||||| || | ||||| | | |||||||||||||| |||| |||||||| |    
T  31517846 aaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaa 31517747  T
Q  463 cgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataa 538  Q
    | ||| ||  | ||||||  ||||| ||| |  |||||||| || | ||||||||| | || ||||||||||||||    
T  31517746 catgtcatgag-ttgttttgataagttctcccaaacagtctcacaagtgcttatgccagtaaataagctcaaataa 31517672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 363 - 460
Target Start/End: Original strand, 16322813 - 16322910
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||||||||  ||||||| | |||||||| ||| | ||||||||||||||| ||||||||| | | | |||| |||||||||||||| | ||||||    
T  16322813 aaagataaaatatagtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatggaaataagctaaaaacaacttatg 16322910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 363 - 451
Target Start/End: Complemental strand, 23544746 - 23544657
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagct-ctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    |||||||||||  ||||||||| ||||||||||||||  ||| ||||||||||||||||| | ||| ||| |||||| ||| ||||||||    
T  23544746 aaagataaaattaagtcaaattgttttcatataagctattaaactgttttcataagctatctcggaaaacttatgaacatacgctaaaaa 23544657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 387 - 460
Target Start/End: Complemental strand, 28482315 - 28482242
Alignment:
Q  387 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||||||||||| ||||||||||| ||||| ||| ||||| | | || ||||||||||||||||||| |||||    
T  28482315 tttcatataagctataagctgtttttataagttatcttggagagcttacgaaaataagctaaaaatagtttatg 28482242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 30371107 - 30371212
Alignment:
Q  358 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 457  Q
    |||| |||||||||||  | ||||||| |||||||||||||| |||| ||||||||||||  |||||||| | | |||  ||||||||| |||| | |||    
T  30371107 taacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaacaactt 30371206  T
Q  458 atggac 463  Q
    ||||||    
T  30371207 atggac 30371212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 363 - 460
Target Start/End: Complemental strand, 51695600 - 51695504
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||||||||  ||| ||||| ||||| |||||| | | || |||||||||||||||| ||||| ||  |||||||||||||| |||||||||||||    
T  51695600 aaagataaaataaagt-aaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatg 51695504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 344 - 460
Target Start/End: Complemental strand, 10199533 - 10199417
Alignment:
Q  344 ataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataa 443  Q
    ||||||| ||||| ||||  ||||||||||  ||||||| | ||||| ||||| |  |||||| ||||||||||||||||| || | | |||||||||||    
T  10199533 ataagttatttctataacccaagataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataa 10199434  T
Q  444 gctaaaaatagcttatg 460  Q
    ||| |||| | ||||||    
T  10199433 gctgaaaacaacttatg 10199417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 421
Target Start/End: Original strand, 17269180 - 17269272
Alignment:
Q  329 tataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||||  ||||||||||||| |||||  ||| ||||  |||||  ||||||||| |||||||||||||  |||| ||||||||||||||||    
T  17269180 tataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctat 17269272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 460
Target Start/End: Complemental strand, 27820414 - 27820346
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||||| || |||||||| ||||||||| ||||| ||  |||||||||||||| |||||||||||||    
T  27820414 tataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatg 27820346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 460
Target Start/End: Original strand, 34290229 - 34290297
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||||| ||||||||||||||||||||| ||| | ||| |||||||||||||| |||| | ||||||    
T  34290229 tataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatg 34290297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 461
Target Start/End: Original strand, 35179141 - 35179201
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgg 461  Q
    ||||||||||||||||| |||| |||| ||| |||||||||||||| |||| |||||||||    
T  35179141 taagctgttttcataagttattatggagaacttatgaaaataagctgaaaacagcttatgg 35179201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 460
Target Start/End: Original strand, 45975683 - 45975751
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||||||  |||||||||||||||||||| ||||| ||  |||||||||||||| |||| ||||||||    
T  45975683 tataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 45975751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 386 - 553
Target Start/End: Complemental strand, 6231899 - 6231733
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctata 485  Q
    ||||||||||| || |||||||||||| |||||||   || | ||| |||  ||||||||| |||| || |||||||| ||| || |  ||||||| ||     
T  6231899 ttttcatataatctataagctgttttcgtaagctaacctgaagaacttatagaaataagctgaaaacagtttatggacatgtcat-tagttgtttccatg 6231801  T
Q  486 agctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacagg 553  Q
    |||| | | ||||| ||| || |||| |||||||| ||||||| |||||||||| |||| ||||||||    
T  6231800 agctatccagaacaatctcacaaatgtttatgctagtagataacctcaaataaaccaattcaaacagg 6231733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 376 - 427
Target Start/End: Complemental strand, 25006127 - 25006076
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagctattttgga 427  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||| |||||    
T  25006127 agtcaaattgttttcatataagctataagttgttttcataagctatcttgga 25006076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 15361690 - 15361736
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||    
T  15361690 agtcaaattattttcatataagctataagctgttttcataagatatt 15361736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 363 - 421
Target Start/End: Complemental strand, 27738286 - 27738228
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||||||||  ||||||||| |||||||||||||| |||  ||||||||||||||||    
T  27738286 aaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctat 27738228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 358 - 420
Target Start/End: Complemental strand, 28467418 - 28467356
Alignment:
Q  358 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 420  Q
    |||| |||||||||||  ||||||||| ||||||||||||||  ||| |||||||||||||||    
T  28467418 taacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataagcta 28467356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 571 - 609
Target Start/End: Complemental strand, 42556563 - 42556525
Alignment:
Q  571 ttatgctagtaaataagctcaaataagtcaatctaaaca 609  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  42556563 ttatgctagtatataagctcaaataagtcaatctaaaca 42556525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 4576807 - 4576852
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagct 446  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  4576807 taagctgttttcataagctatattgaataacttatgaaaataagct 4576852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 421
Target Start/End: Complemental strand, 33204497 - 33204436
Alignment:
Q  360 actaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||||||||||  ||| || || ||||| |||||||| |||||||||||||||||||||    
T  33204497 actaaagataaaataaagttaatttattttcgtataagctgtaagctgttttcataagctat 33204436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Complemental strand, 39603899 - 39603842
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 458  Q
    |||| |||||| ||| ||||||||||||| | |||||||||||||| |||||||||||    
T  39603899 taagttgtttttatatgctattttggatagcttatgaaaataagctgaaaatagctta 39603842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 363 - 456
Target Start/End: Original strand, 49888731 - 49888824
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagct 456  Q
    |||||||||||  |||  |||| ||||| |||||||| | || |||||||||||||||| || || ||| |||||||||||||  |||||||||    
T  49888731 aaagataaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 49888824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 331 - 459
Target Start/End: Original strand, 4200161 - 4200289
Alignment:
Q  331 taagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataa 430  Q
    ||||| ||||| |||||||| ||| | |||| |||||||||||  |||||| || |||||||||||||| ||   ||||||| |||| |||  ||||       
T  4200161 taagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttcgtaagatatcctggaggg 4200260  T
Q  431 catatgaaaataagctaaaaatagcttat 459  Q
    | |||||||||||||| |||| |||||||    
T  4200261 cttatgaaaataagcttaaaacagcttat 4200289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 376 - 460
Target Start/End: Original strand, 6292470 - 6292554
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||||||| |||||| ||||  | |||||| ||||| ||| |||||||||| | | |||||||||||||| |||| ||||||||    
T  6292470 agtcaaattattttcacataacttataagctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatg 6292554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 496 - 551
Target Start/End: Original strand, 12763419 - 12763475
Alignment:
Q  496 aacagtcttaccaatgcttatgctaatagataagctc-aaataaaacaatccaaaca 551  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||  |||||||||||    
T  12763419 aacagtcttacaaatgcttatgctaatagataaactcaaaataagccaatccaaaca 12763475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 15360827 - 15360899
Alignment:
Q  332 aagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaag 404  Q
    |||| ||||||||| |||| ||||| |||| |||||||||||  ||||||| | |||||||||||||| ||||    
T  15360827 aagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataag 15360899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 364 - 460
Target Start/End: Complemental strand, 24915156 - 24915060
Alignment:
Q  364 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    ||||||||||  ||| ||||| ||||  |||| ||| ||||||||||||||||||| | ||||| ||| | |||||||||| | |||| ||||||||    
T  24915156 aagataaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatg 24915060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 343 - 451
Target Start/End: Original strand, 25479525 - 25479633
Alignment:
Q  343 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 442  Q
    |||||| | ||||| |||| |||||||||||   |||||||| | |||||||| ||| |||| ||||||||||||||||  | || | | ||||||||||    
T  25479525 tataagatctttctataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaata 25479624  T
Q  443 agctaaaaa 451  Q
    |||| ||||    
T  25479625 agctgaaaa 25479633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 27963452 - 27963376
Alignment:
Q  387 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    ||||||| ||| |||||| ||||||||||||||||| |||| | | |||  |||||||||||||| | |||||||||    
T  27963452 tttcataaaagttctaagttgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggac 27963376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 28689537 - 28689458
Alignment:
Q  386 ttttcatataagctctaagctgttttcata--agctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    |||||||||||||| |||| ||||||||||  |||||| ||||| | | |||||||||||||| |||| | |||||||||    
T  28689537 ttttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggac 28689458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 391 - 451
Target Start/End: Complemental strand, 38867909 - 38867849
Alignment:
Q  391 atataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    ||||||||| ||| ||||||||||||| ||| ||| | ||| |||||||||||||||||||    
T  38867909 atataagctttaaactgttttcataagttatcttgaagaacttatgaaaataagctaaaaa 38867849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 49365878 - 49365818
Alignment:
Q  350 tgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttt 410  Q
    |||||| ||||| ||||||||||| |||||||||| |||||||| ||||| ||| ||||||    
T  49365878 tgtttcagtaacaaaagataaaatagagtcaaattgttttcatacaagctataaactgttt 49365818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 371
Target Start/End: Complemental strand, 4202298 - 4202227
Alignment:
Q  300 ggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataaa 371  Q
    |||||| ||||||||||| || |||||| |||||||  ||| ||||||||| ||||| |||| |||||||||    
T  4202298 ggataagcaacttaattaagcgtttatcatataagtgcttaagtataagttatttctataacaaaagataaa 4202227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 618
Target Start/End: Original strand, 11695975 - 11696021
Alignment:
Q  571 ttatgctagtaaataagctcaaataagtcaatctaaacatgccctaat 618  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  11695975 ttatgctaataaataagctcaaataagtcaatccaaaca-gccctaat 11696021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 458
Target Start/End: Original strand, 25944420 - 25944491
Alignment:
Q  387 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 458  Q
    |||||| |||| | ||||| |||||||||||||||  ||||| |  |||||||||||||| |||||||||||    
T  25944420 tttcatgtaagttataagcggttttcataagctatcctggattaattatgaaaataagctgaaaatagctta 25944491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 417
Target Start/End: Complemental strand, 33527278 - 33527199
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 417  Q
    ||||| ||||| | |||||  ||| |||||||||||  ||||||| | ||||||||||| || |||||||||||||||||    
T  33527278 ttatgaataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataag 33527199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 408 - 451
Target Start/End: Original strand, 38189773 - 38189816
Alignment:
Q  408 ttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||    
T  38189773 ttttcttaagctattttggataacttatgaagataagctaaaaa 38189816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 463
Target Start/End: Complemental strand, 39270506 - 39270431
Alignment:
Q  388 ttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    |||||||||| | ||||||||||||||||||||   | || | |||||||||||||| | |||| |||||||||||    
T  39270506 ttcatataagatataagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggac 39270431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 421
Target Start/End: Complemental strand, 1255537 - 1255479
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||| ||||  |||||||||||||||||| ||| | |||||||||||||| ||||||    
T  1255537 aaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 1255479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 393 - 463
Target Start/End: Original strand, 2294905 - 2294975
Alignment:
Q  393 ataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    ||||||| |||||| ||||||||| |||| ||||| ||| || ||||||||| | |||| |||||||||||    
T  2294905 ataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaacagcttatggac 2294975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 475 - 549
Target Start/End: Complemental strand, 4549536 - 4549462
Alignment:
Q  475 ttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaa 549  Q
    ||||||||||||||||| |  |||||||| |  ||||||||||| | ||||||| |||||||||  |||||||||    
T  4549536 ttgtttctataagctctcccaaacagtctcagaaatgcttatgccagtagataatctcaaataagccaatccaaa 4549462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 421
Target Start/End: Complemental strand, 5422026 - 5421968
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||||||||  ||||||||| ||||| |||||||| |||| |||||| |||||||||    
T  5422026 aaagataaaatatagtcaaattgttttcttataagctataagttgttttgataagctat 5421968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 16145035 - 16144981
Alignment:
Q  404 gctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 458  Q
    |||| |||||||| |||| ||| ||||| ||||||||||| ||||||||||||||    
T  16145035 gctgctttcataaactatcttgaataacttatgaaaataacctaaaaatagctta 16144981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 25005890 - 25005808
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 458  Q
    |||||| || |||||||||||||| |||| ||||||||||||||||  |||| | | ||| |||| ||||| |||||| ||||    
T  25005890 agtcaacttgttttcatataagctataagttgttttcataagctatcctggagagcttataaaaacaagcttaaaatatctta 25005808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 573 - 611
Target Start/End: Original strand, 28467548 - 28467586
Alignment:
Q  573 atgctagtaaataagctcaaataagtcaatctaaacatg 611  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  28467548 atgctagtaaataaactcaaataagtcaatccaaacatg 28467586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 425
Target Start/End: Original strand, 32958584 - 32958678
Alignment:
Q  331 taagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttg 425  Q
    ||||| |||| ||||||| | ||||| | || |||||||||||  ||||||| | |||||| ||||||| ||| | |||||||||| ||||||||    
T  32958584 taagtatttacgtataagctctttctatcaccaaagataaaattaagtcaaactattttcagataagctataaacagttttcataaactattttg 32958678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 512 - 554
Target Start/End: Complemental strand, 37631517 - 37631475
Alignment:
Q  512 cttatgctaatagataagctcaaataaaacaatccaaacaggc 554  Q
    ||||||||||||||| |||||||||||  ||||||||||||||    
T  37631517 cttatgctaatagatgagctcaaataagccaatccaaacaggc 37631475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 405 - 459
Target Start/End: Complemental strand, 41195257 - 41195203
Alignment:
Q  405 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 459  Q
    |||||||||||| |||| ||||| ||| |||||||||||||| |||| |||||||    
T  41195257 ctgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttat 41195203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 1432479 - 1432564
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaa 448  Q
    ||||||||||| ||||  |||| ||||  |||||||| |||  ||||||||||| |||| ||||| ||| ||||||| ||||||||    
T  1432479 aaagataaaatagagttcaattgtttttttataagctataaattgttttcataaactatcttggagaacttatgaaagtaagctaa 1432564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 363 - 420
Target Start/End: Complemental strand, 5592791 - 5592734
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 420  Q
    |||||||||||  |||| |||| || ||||||||||| |||| |||||||||||||||    
T  5592791 aaagataaaataaagtcgaattgttgtcatataagctataagttgttttcataagcta 5592734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 387 - 460
Target Start/End: Original strand, 6774976 - 6775048
Alignment:
Q  387 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||||||||||  |||||||||||| ||||||| ||| | |||||| | ||||||||| |||| ||||||||    
T  6774976 tttcatataagcta-aagctgttttcacaagctatcttgaagaacataagtaaataagctgaaaacagcttatg 6775048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 338 - 451
Target Start/End: Original strand, 7472251 - 7472363
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    |||| |||||| | ||||| |||| ||||||| |||  ||| ||||| ||||  ||||| || |||||||||| |||||||||| ||||| | | |||||    
T  7472251 ttatttataagctatttctataacaaaagatataata-agttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatga 7472349  T
Q  438 aaataagctaaaaa 451  Q
    ||||||||| ||||    
T  7472350 aaataagctgaaaa 7472363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 408 - 457
Target Start/End: Original strand, 7941615 - 7941664
Alignment:
Q  408 ttttcataagctattttggataacatatgaaaataagctaaaaatagctt 457  Q
    |||||||||||||||| ||| ||| |||||||||||| | ||||||||||    
T  7941615 ttttcataagctatttcggagaacttatgaaaataagttgaaaatagctt 7941664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 570 - 607
Target Start/End: Original strand, 24279861 - 24279898
Alignment:
Q  570 tttatgctagtaaataagctcaaataagtcaatctaaa 607  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  24279861 tttatgctagtaaataagttcaaataagacaatctaaa 24279898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 26630444 - 26630521
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 457  Q
    ||||| |||||||||||||| ||| ||||||| ||| |||||  |||| |||||||| |||||| || |||| |||||    
T  26630444 aaattgttttcatataagctataaactgttttgatacgctatcctggagaacatatggaaataaacttaaaaaagctt 26630521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 390 - 451
Target Start/End: Complemental strand, 27887197 - 27887136
Alignment:
Q  390 catataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    |||||||||| |||| ||||||||||| ||||  |||| | ||||| |||||||||||||||    
T  27887197 catataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaa 27887136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 300 - 421
Target Start/End: Complemental strand, 47003043 - 47002922
Alignment:
Q  300 ggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagct 399  Q
    |||||||||| ||||||| |||| ||| |||||||| |||||| |||| || ||||  |||  |||||||||||  ||| ||||| |||| ||| ||| |    
T  47003043 ggataaacaatttaattaagcatctatagtataagtgtttatgcataaattatttcgataataaaagataaaataaagttaaattgtttttatacaagtt 47002944  T
Q  400 ctaagctgttttcataagctat 421  Q
      ||  ||||||||||||||||    
T  47002943 agaaattgttttcataagctat 47002922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 1e-16; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 6364088 - 6364209
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    ||||||||||| | ||||| |||| |||||||||||  ||| ||||||| |||| ||||||| |||||  ||||||||||||||  |||| ||| || ||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataagcaattttcataagctataatggagaacttacga 6364187  T
Q  438 aaataagctaaaaatagcttat 459  Q
    ||||||||| |||| |||||||    
T  6364188 aaataagctgaaaacagcttat 6364209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 363 - 451
Target Start/End: Original strand, 42685388 - 42685476
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    |||||||||||  ||| ||||| ||||  ||||||||||||| |||||||||||||||||||||| ||| | ||||||||||| |||||    
T  42685388 aaagataaaatgaagttaaattgtttttttataagctctaagttgttttcataagctattttggagaacgtgtgaaaataagccaaaaa 42685476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 364 - 463
Target Start/End: Original strand, 2996538 - 2996637
Alignment:
Q  364 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    ||||||||||  ||||||||| |||| ||||||| | |||| |||||||||||||||| ||||| | | |||||||||||| | |||| |||||||||||    
T  2996538 aagataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggac 2996637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 363 - 550
Target Start/End: Original strand, 23459592 - 23459777
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 462  Q
    |||||||||||  ||| || || ||||| |||||||| |||||||||||||||||  || ||| | ||| |||||| ||||| | |||||| |||||  |    
T  23459592 aaagataaaatgaagttaagttgttttcttataagctataagctgttttcataagagatcttgaaaaacttatgaatataagttgaaaataacttattaa 23459691  T
Q  463 cgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaac 550  Q
    | ||| ||| | || |||| ||||| ||| || |||||||||||| || ||||||||| ||||||||||||||||   ||||||||||    
T  23459692 catgtcataagcttttttc-ataagttctccgaaacagtcttacc-atacttatgctagtagataagctcaaatatgccaatccaaac 23459777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 353 - 461
Target Start/End: Original strand, 11802488 - 11802596
Alignment:
Q  353 ttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaat 452  Q
    |||| |||| |||||||||||  ||||||||| || ||| |||||||  ||| ||||||||||||||||| |||| | | ||||| |||||||| ||||     
T  11802488 ttctataacaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctattatggagagcttatgagaataagctgaaaac 11802587  T
Q  453 agcttatgg 461  Q
    |||||||||    
T  11802588 agcttatgg 11802596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 392 - 460
Target Start/End: Complemental strand, 17822942 - 17822874
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||| ||| |||| |||||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||    
T  17822942 tatatgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatg 17822874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 342 - 421
Target Start/End: Original strand, 49219082 - 49219161
Alignment:
Q  342 gtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||||| ||||| |||| ||| |||||||  ||||||||| |||||||||||||| |||| ||||||||||| ||||    
T  49219082 gtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactat 49219161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 405 - 538
Target Start/End: Original strand, 28615529 - 28615662
Alignment:
Q  405 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgt-ttctataagctcttcggaacagtct 503  Q
    ||||||| ||| ||||| ||||| | | |||| ||||||| | |||||| || |||||| ||| ||| ||| || |||| ||||||||||| ||||||||    
T  28615529 ctgtttttataggctatcttggagagcttatggaaataaggtgaaaatatctaatggacatgtcataagttggtattct-taagctcttcgaaacagtct 28615627  T
Q  504 taccaatgcttatgctaatagataagctcaaataa 538  Q
    ||| ||||||||||  | |||||||||||||||||    
T  28615628 tacaaatgcttatgtcattagataagctcaaataa 28615662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 417
Target Start/End: Original strand, 8130104 - 8130192
Alignment:
Q  329 tataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 417  Q
    |||||||  ||| |||| |||| ||||| |||| |||||||| ||  ||||||||| |||||||||||||| ||| |||||||||||||    
T  8130104 tataagtgcttacgtatgagttctttctataacaaaagataacataaagtcaaattattttcatataagctataaactgttttcataag 8130192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 459
Target Start/End: Original strand, 20031730 - 20031810
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct-aaaaatagcttat 459  Q
    ||||| ||||||| |||||| ||||| |||||||||||||||||| || ||| ||||||||| |||| ||||| |||||||    
T  20031730 aaattgttttcatgtaagctataagcagttttcataagctattttagagaacttatgaaaatgagctgaaaaacagcttat 20031810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 308 - 420
Target Start/End: Complemental strand, 30207731 - 30207620
Alignment:
Q  308 aacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctg 407  Q
    |||||||||| ||| ||||| |||||||  ||||||||| |||  |||| |||| ||| |||||||  | ||||| | |||||||||||||| |||| ||    
T  30207731 aacttaattaagcacttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttg 30207633  T
Q  408 ttttcataagcta 420  Q
    |||||||||||||    
T  30207632 ttttcataagcta 30207620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 451
Target Start/End: Original strand, 51630075 - 51630163
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    |||||||||||  ||| ||||| |||| ||||||||| |||||| |||||||||||||| ||| | ||  |||||||||||||| ||||    
T  51630075 aaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaa 51630163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 53626729 - 53626813
Alignment:
Q  352 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatg 436  Q
    ||||| |||| |||||||||||  | ||||| | |||||||||||||| |||||||||||||||||| ||| |||| || |||||    
T  53626729 tttctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcataagcgattatggacaatatatg 53626813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 942184 - 942129
Alignment:
Q  393 ataagctctaagctgttttcataagctattttggataacatatgaaaataagctaa 448  Q
    ||||| |||||||||||||||||||||||| |||| ||| ||| ||||||||||||    
T  942184 ataagttctaagctgttttcataagctattatggagaacttataaaaataagctaa 942129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 9841053 - 9841141
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct-aaaaatagcttatggacgtgttatatgtt 475  Q
    |||||||||||||| |||| ||||||||||||||||  |||  ||| | |||||||||||| ||||| ||||||||||| ||| |||||||    
T  9841053 ttttcatataagctataagatgttttcataagctatcctgg--aacttgtgaaaataagctgaaaaacagcttatggacatgtcatatgtt 9841141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 392 - 451
Target Start/End: Complemental strand, 16200058 - 16199999
Alignment:
Q  392 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    |||| ||| ||||||||||||||||||||| |||||  || |||||||||||||||||||    
T  16200058 tatatgctataagctgttttcataagctatcttggaggacttatgaaaataagctaaaaa 16199999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 425
Target Start/End: Original strand, 24160929 - 24161016
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttg 425  Q
    ||||||||||| | ||||| |||| || ||||||||| ||| ||||| ||||||| || ||| |||| ||| ||||||||||||||||    
T  24160929 ttatgtataagctatttctataacaaaggataaaatcaagttaaattattttcatgtaggctataagttgtgttcataagctattttg 24161016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 572 - 615
Target Start/End: Complemental strand, 44638182 - 44638139
Alignment:
Q  572 tatgctagtaaataagctcaaataagtcaatctaaacatgccct 615  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  44638182 tatgctagtaaataaactcaaataagtcaatccaaacatgccct 44638139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 319 - 421
Target Start/End: Original strand, 23819010 - 23819111
Alignment:
Q  319 gcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagc 418  Q
    ||||||||| || |||| |||||||||||||| ||||  |||| ||| |||||||  ||||||| | |||||||||||| | |||  |||||||||||||    
T  23819010 gcatttatcatacaagtgtttatgtataagttatttccataac-aaatataaaatgtagtcaaactgttttcatataagttataacatgttttcataagc 23819108  T
Q  419 tat 421  Q
    |||    
T  23819109 tat 23819111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 323 - 429
Target Start/End: Original strand, 24443962 - 24444068
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    ||||| |||||||| |||||||||||   |||||  ||| ||| |||||||  | |||||   |||||||||||||| |||| |||||||||||||||||    
T  24443962 ttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttgttttcataagctatt 24444061  T
Q  423 ttggata 429  Q
     ||||||    
T  24444062 gtggata 24444068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 338 - 464
Target Start/End: Complemental strand, 27043961 - 27043835
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    ||||||||||| |  || | |||| || ||||||||  ||| ||||| ||||| |||||||| |||| |||||| |||| |||| ||||| ||| |||||    
T  27043961 ttatgtataaggtacttatataacaaaggataaaataaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaacgtatga 27043862  T
Q  438 aaataagctaaaaatagcttatggacg 464  Q
    | |||||||||||| |  |||||||||    
T  27043861 atataagctaaaaacaatttatggacg 27043835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 52735075 - 52735173
Alignment:
Q  352 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaa 450  Q
    |||||||||| |||||||||||  |||||||||  ||||||||||| | || | ||||||| |||||||| ||| | | | |||| |||||||||||||    
T  52735075 tttctgtaacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagcttatggaaataagctaaaa 52735173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 421
Target Start/End: Original strand, 4071835 - 4071904
Alignment:
Q  352 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||| |||| |||||||||||  ||||||||| |||||||||||||| |||| |||| | |||||||||    
T  4071835 tttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgttatgataagctat 4071904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 443
Target Start/End: Original strand, 26883934 - 26884039
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    ||||||||||||| ||||| |||  | |||||||||  ||| ||||| |||||||||||||| ||||  |||||| ||| || | ||||| ||| |||||    
T  26883934 ttatgtataagttatttctctaagaagagataaaatgaagttaaattgttttcatataagctataagtcgttttcgtaaactttattggagaacctatga 26884033  T
Q  438 aaataa 443  Q
    ||||||    
T  26884034 aaataa 26884039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 399
Target Start/End: Original strand, 30024623 - 30024700
Alignment:
Q  322 tttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagct 399  Q
    |||||| |||||||  ||||| ||||||| ||||| |||| |||||||||||  ||| ||||| ||||||||||||||    
T  30024623 tttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagct 30024700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 55302251 - 55302308
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 458  Q
    ||||||||| ||||||||||| ||||| ||| |||||||||||||| |||| ||||||    
T  55302251 taagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagctta 55302308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 407 - 451
Target Start/End: Complemental strand, 825552 - 825508
Alignment:
Q  407 gttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    ||||||||||||||||||||| ||| |||||||||||||| ||||    
T  825552 gttttcataagctattttggagaacttatgaaaataagctgaaaa 825508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 337 - 421
Target Start/End: Original strand, 35958593 - 35958677
Alignment:
Q  337 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||||||||| | ||||| ||||  ||| ||||||  |||||||||  ||| |||||||||  ||||||||||||||||||||    
T  35958593 tttatgtataagctatttctataacataagttaaaataaagtcaaatttgttttatataagctagaagctgttttcataagctat 35958677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 437538 - 437455
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 446  Q
    |||||||||||  ||| ||||| | |||||||||| | |||| ||||||||||||||||||| ||   | ||||||||||||||    
T  437538 aaagataaaataaagttaaattgtgttcatataagttttaagttgttttcataagctattttagaggccttatgaaaataagct 437455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 460
Target Start/End: Original strand, 1706604 - 1706683
Alignment:
Q  381 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||| ||||| || ||||| |||||||||||||||| |||| ||||| | | |||||||||||| |  ||||||||||||    
T  1706604 aattgttttcgtagaagctataagctgttttcataaactatcttggacagcttatgaaaataagttggaaatagcttatg 1706683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 618
Target Start/End: Complemental strand, 10205886 - 10205851
Alignment:
Q  583 ataagctcaaataagtcaatctaaacatgccctaat 618  Q
    ||||||||||||||||||||||||||||||| ||||    
T  10205886 ataagctcaaataagtcaatctaaacatgccataat 10205851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 551
Target Start/End: Original strand, 22796763 - 22796806
Alignment:
Q  508 aatgcttatgctaatagataagctcaaataaaacaatccaaaca 551  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||    
T  22796763 aatgcttatgctagtagataaactcaaataaatcaatccaaaca 22796806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 483 - 538
Target Start/End: Complemental strand, 25487544 - 25487489
Alignment:
Q  483 ataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataa 538  Q
    |||||||||||  |||| |||||| | ||||||||||||||||||| |||||||||    
T  25487544 ataagctcttccaaacaatcttacaagtgcttatgctaatagataaactcaaataa 25487489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 418
Target Start/End: Original strand, 36460530 - 36460605
Alignment:
Q  343 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagc 418  Q
    |||||||| ||||  |||| |||||||| ||| || || | | |||||||||||||| ||||||||||||||||||    
T  36460530 tataagttatttcgataacaaaagataagatcaagccacactgttttcatataagctataagctgttttcataagc 36460605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 40174544 - 40174627
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
    ||||| |||||||| ||||| ||||||||||||||||||||  ||||| ||| | ||| |||||| | |||| || ||||||||    
T  40174544 aaattgttttcataaaagctataagctgttttcataagctacattggagaacttgtgataataagttgaaaacagtttatggac 40174627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 423
Target Start/End: Original strand, 52754581 - 52754624
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattt 423  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||    
T  52754581 aaatccttttcacataagctataagctgttttcataagctattt 52754624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 552
Target Start/End: Original strand, 53315360 - 53315478
Alignment:
Q  433 tatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctc 532  Q
    |||||||||||| |||||||||||||||||| ||| ||||| ||||||  |||||||||    || |||||||    ||||||| | | | |||||||||    
T  53315360 tatgaaaataagttaaaaatagcttatggacatgtgatatg-ttgttttcataagctctcacaaatagtcttatatgtgcttataccagtggataagctc 53315458  T
Q  533 aaataaaacaatccaaacag 552  Q
    ||||||  ||||||||||||    
T  53315459 aaataagtcaatccaaacag 53315478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 421
Target Start/End: Original strand, 3175915 - 3175973
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||||||||  ||||||||| ||||||  |||| | |||||||||||||||||||||    
T  3175915 aaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctat 3175973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 380 - 446
Target Start/End: Original strand, 29778776 - 29778842
Alignment:
Q  380 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 446  Q
    ||||| |||||||||||||| |||| |||||||||||||||  ||| | | | ||||||||||||||    
T  29778776 aaattgttttcatataagctgtaagttgttttcataagctaccttgaagagcttatgaaaataagct 29778842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 463
Target Start/End: Complemental strand, 30338723 - 30338597
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctg-ttttcataagctattttggataacatatg 436  Q
    ||||||||||  | ||||| |||| ||||||| |||  ||| ||| | |||||||||||||| ||| ||| |||||||||||| | ||||| |   ||||    
T  30338723 ttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctataaactgtttttcataagctctcttggagagtttatg 30338624  T
Q  437 aaaataagctaaaaatagcttatggac 463  Q
    |||||||||  |||| |||||||||||    
T  30338623 aaaataagcataaaacagcttatggac 30338597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 386 - 444
Target Start/End: Complemental strand, 35571714 - 35571656
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 444  Q
    ||||| |||||||| ||||||||||||||||||||| || || ||| | ||||||||||    
T  35571714 ttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataag 35571656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 416
Target Start/End: Complemental strand, 45128441 - 45128363
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataa 416  Q
    ||||||||||  | ||||| |||| |||||||||||| | ||||||| || ||||||||||| |||  |||||||||||    
T  45128441 ttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctataaattgttttcataa 45128363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 421
Target Start/End: Complemental strand, 54325143 - 54325085
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    |||||||||||  ||||||| | |||||||||||||| |||||| |||||| |||||||    
T  54325143 aaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctat 54325085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 510 - 551
Target Start/End: Original strand, 10172172 - 10172213
Alignment:
Q  510 tgcttatgctaatagataagctcaaataaaacaatccaaaca 551  Q
    |||||||||  ||||||||||||||||||| |||||||||||    
T  10172172 tgcttatgcatatagataagctcaaataaatcaatccaaaca 10172213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 376 - 417
Target Start/End: Original strand, 24091440 - 24091481
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcataag 417  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  24091440 agtcaaattattttcatataagctataaactgttttcataag 24091481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 302 - 419
Target Start/End: Complemental strand, 24160662 - 24160545
Alignment:
Q  302 ataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctct 401  Q
    ||||||||||||||||  |  ||||| |||||||  ||||  ||||| | ||||| |||| |||||||| ||  | ||||| | ||||||| |||||| |    
T  24160662 ataaacaacttaattaaacgcttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctat 24160563  T
Q  402 aagctgttttcataagct 419  Q
    ||| ||||||||||||||    
T  24160562 aagttgttttcataagct 24160545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 32421087 - 32421148
Alignment:
Q  381 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 442  Q
    |||| ||| |||||||||| ||||| |||| |||||||||||||| | ||| ||||||||||    
T  32421087 aattgtttacatataagctataagcagtttccataagctattttgaagaacttatgaaaata 32421148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 571 - 600
Target Start/End: Complemental strand, 34430655 - 34430626
Alignment:
Q  571 ttatgctagtaaataagctcaaataagtca 600  Q
    ||||||||||||||||||||||||||||||    
T  34430655 ttatgctagtaaataagctcaaataagtca 34430626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 386 - 459
Target Start/End: Original strand, 36048520 - 36048593
Alignment:
Q  386 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 459  Q
    |||||||||||||| |||||| |||||| ||||||| || || | | |||| ||||||||| | ||||||||||    
T  36048520 ttttcatataagctataagctattttcaaaagctatcttagagagcttatggaaataagctgacaatagcttat 36048593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 401 - 446
Target Start/End: Complemental strand, 52315265 - 52315220
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagct 446  Q
    |||| ||||| |||||||||||||||| ||| ||||||||||||||    
T  52315265 taagttgtttccataagctattttggaaaacttatgaaaataagct 52315220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 342 - 399
Target Start/End: Complemental strand, 54327576 - 54327519
Alignment:
Q  342 gtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagct 399  Q
    ||||||||||||||| |||| ||||||||||   ||||||| | ||||||||||||||    
T  54327576 gtataagttgtttctataacaaaagataaaacaaagtcaaactgttttcatataagct 54327519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 4e-16; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 4246354 - 4246474
Alignment:
Q  343 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 442  Q
    |||||||||||||| |||  ||||||||| |  |||||   | ||||||||||| || |||||||||||||||||||||| |||| | ||||| ||||||    
T  4246354 tataagttgtttctataataaaagataaattgaagtcagtatgttttcatataatctataagctgttttcataagctattatggagagcatataaaaata 4246453  T
Q  443 agctaaaaatagcttatggac 463  Q
    || | |||| |||||||||||    
T  4246454 agttgaaaacagcttatggac 4246474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 329 - 551
Target Start/End: Original strand, 7148597 - 7148817
Alignment:
Q  329 tataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggat 428  Q
    |||||||  ||||||||||| | |||||  ||||||||||||||   | || || ||||| |||||||||| |||| | |||| ||||||||   ||||     
T  7148597 tataagtgcttatgtataagctatttctacaactaaagataaaaaaaa-tccaactctttacatataagctataaggtattttaataagctaccctggag 7148695  T
Q  429 aacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataa 528  Q
    | | |||||||||||| | ||||||||||||||||  || ||| ||| |||||  |||||||| | ||||| ||| || | ||||||||| | |||||||    
T  7148696 agcttatgaaaataagttgaaaatagcttatggacaagtcataagtt-gtttccgtaagctctgctgaacactctcacaagtgcttatgcgactagataa 7148794  T
Q  529 gctcaaataaaacaatccaaaca 551  Q
    ||||||||||  ||| |||||||    
T  7148795 gctcaaataagtcaaaccaaaca 7148817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 338 - 460
Target Start/End: Original strand, 24476541 - 24476663
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    ||||||||||| | ||||| || | |||||||||||  ||| ||||| |||||||||||||  ||||| ||||| ||||||||||||||| |||  ||      
T  24476541 ttatgtataagctatttctatagcaaaagataaaatgtagttaaattattttcatataagcgataagcagttttgataagctattttggagaacggattg 24476640  T
Q  438 aaataagctaaaaatagcttatg 460  Q
    ||||||| | |||||||||||||    
T  24476641 aaataagttgaaaatagcttatg 24476663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 421
Target Start/End: Complemental strand, 282021 - 281896
Alignment:
Q  300 ggataaacaacttaattatgcatttatcgtataagtttttatgtat----aagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatata 395  Q
    |||||| |||| |||||| ||| | ||||||||||| |||||||||    ||| | || || |||| |||||||||||  |||||| || ||||||||||    
T  282021 ggataagcaacataattaagcaatgatcgtataagtgtttatgtatctataagctattcctataacaaaagataaaataaagtcaacttgttttcatata 281922  T
Q  396 agctctaagctgttttcataagctat 421  Q
    |||| |||||||| ||||||||||||    
T  281921 agctataagctgtgttcataagctat 281896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 301 - 552
Target Start/End: Original strand, 8010259 - 8010509
Alignment:
Q  301 gataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatat-aagct 399  Q
    ||||||||||||||||| |  |||||| |||||||  ||| ||||||| | ||||| |||| | | |||||||  ||||||  |  |||||| | ||| |    
T  8010259 gataaacaacttaattaagtgtttatcatataagtgcttaggtataagctatttctataacaaca-ataaaataaagtcaatctactttcattttaagtt 8010357  T
Q  400 ctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaaca 499  Q
     ||||||||||| ||||| |||  |||| ||| |||  |||||| || ||||||||||||| || ||| ||  ||| ||||||||||||||| | | ||     
T  8010358 ataagctgttttaataagttatcctggagaacttatagaaataaactgaaaatagcttatgaacatgtcatgagtt-gtttctataagctctcctggact 8010456  T
Q  500 gtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacag 552  Q
    |||| || |||| |||||| |||||||||||||| ||||  ||||||||||||    
T  8010457 gtctcacaaatgtttatgccaatagataagctcacataagtcaatccaaacag 8010509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 29274360 - 29274276
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    ||||||||||| | ||||| || | |||||||||||  ||||||||| |||||||||||||| ||| ||||||||||||| ||||    
T  29274360 ttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataagatatt 29274276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 300 - 463
Target Start/End: Original strand, 4006615 - 4006778
Alignment:
Q  300 ggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagct 399  Q
    |||||| |||||||||||  |  |||| | ||||||  ||||| ||||| | ||||| |||| || ||||||||  ||||||||| |||| |||||||||    
T  4006615 ggataagcaacttaattaatcccttatagcataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagct 4006714  T
Q  400 ctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 463  Q
     |||| ||||||||||||||||    || |   |||||||||||||| |||||| |||||||||    
T  4006715 ataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggac 4006778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 417
Target Start/End: Original strand, 22742290 - 22742384
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 417  Q
    |||||||||||||| |||| |||||| | ||| | |||| || ||||||||  ||||||||| |||||||||||||| |||||| |||| |||||    
T  22742290 ttatcgtataagttcttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctataagctatttttataag 22742384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 338 - 451
Target Start/End: Complemental strand, 9093687 - 9093574
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 437  Q
    ||||| ||||| | ||||| || | |||||||||||  ||| ||||| ||||| |||||||| ||||||||||||||||||| | || || ||| || ||    
T  9093687 ttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaaga 9093588  T
Q  438 aaataagctaaaaa 451  Q
    ||||||||| ||||    
T  9093587 aaataagctgaaaa 9093574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 352 - 469
Target Start/End: Original strand, 24782012 - 24782129
Alignment:
Q  352 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    ||||| |||| |||||||||||| | ||||||| |||||||||||| | ||||||  ||| |||| ||||  | || | | ||||||||||| |||||||    
T  24782012 tttctataacaaaagataaaatcaaatcaaattgttttcatataagttataagctactttaataaactatccttgagagcttatgaaaataaactaaaaa 24782111  T
Q  452 tagcttatggacgtgtta 469  Q
    ||||||||| ||| ||||    
T  24782112 tagcttatgaacgagtta 24782129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 421
Target Start/End: Original strand, 32975908 - 32976000
Alignment:
Q  329 tataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||| |||||||||||||| |||||||||| ||| |||||||  ||||||| | |||  ||| ||||  |||| ||||||||||||||||    
T  32975908 tataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaactgtttcaatagaagcaataagttgttttcataagctat 32976000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 24836339 - 24836272
Alignment:
Q  329 tataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataa 396  Q
    ||||||| |||||||||||||| ||||| |||| |||||||||||  ||||||||| ||||| |||||    
T  24836339 tataagtatttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataa 24836272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 421
Target Start/End: Complemental strand, 27890010 - 27889892
Alignment:
Q  302 ataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctct 401  Q
    |||||||||||||||| ||||||||| ||| |||  ||||||| ||||| ||||| |||| | |||||||||  | ||||| | ||||||||||||   |    
T  27890010 ataaacaacttaattaagcatttatcatatgagtgcttatgtacaagttatttctataacaacagataaaat-aattcaaactattttcatataagacat 27889912  T
Q  402 aagctgttttcataagctat 421  Q
    || | |||||||||||||||    
T  27889911 aaacagttttcataagctat 27889892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 358 - 460
Target Start/End: Original strand, 2735028 - 2735130
Alignment:
Q  358 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 457  Q
    |||| |||||||||||  ||| ||||| ||||  ||||| || |||||||||||||||||| || ||| | ||| |||||||||||||  |||| |||||    
T  2735028 taacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagctt 2735127  T
Q  458 atg 460  Q
    |||    
T  2735128 atg 2735130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 551
Target Start/End: Complemental strand, 8420343 - 8420115
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    ||||| |||||||  ||||||| ||||| ||||| |||  || ||||||||  ||||||| | | || ||||||  | ||||||||| || ||||||||     
T  8420343 ttatcatataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaactgtgtttatataaaatataagctgttctcgtaagctata 8420244  T
Q  423 ttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaat 522  Q
     |||| | | |||| ||||||| | |||||||||| ||||| ||| ||| | |  ||||||||||||||    |||||||| || | || |||||  |||    
T  8420243 atggagagcttatggaaataagttgaaaatagcttgtggacatgtcataagcta-tttctataagctctcactaacagtctcacaagtgtttatgtcaat 8420145  T
Q  523 agataagctcaaataaa-acaatccaaaca 551  Q
    |||||||||||||||||  |||||||||||    
T  8420144 agataagctcaaataaagtcaatccaaaca 8420115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 578 - 615
Target Start/End: Original strand, 29249513 - 29249550
Alignment:
Q  578 agtaaataagctcaaataagtcaatctaaacatgccct 615  Q
    |||||||||||||||||||||||||| |||||||||||    
T  29249513 agtaaataagctcaaataagtcaatccaaacatgccct 29249550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 484 - 557
Target Start/End: Original strand, 31461756 - 31461829
Alignment:
Q  484 taagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacaggctta 557  Q
    |||||||||  ||||||||| || | | ||||||| |||||||||||||||||||| | || ||||||||||||    
T  31461756 taagctcttgcgaacagtctcacaagtacttatgcaaatagataagctcaaataaaccgatgcaaacaggctta 31461829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 323 - 427
Target Start/End: Original strand, 2206514 - 2206618
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 422  Q
    ||||||||||||  ||| |||||||||| ||| | |||| |||||||||||  |||  |||| |||| ||||||||| | | |||||| ||||||||||     
T  2206514 ttatcgtataagcatttctgtataagttatttttataacaaaagataaaataaagtataattgtttttatataagctatgaactgtttacataagctatc 2206613  T
Q  423 ttgga 427  Q
    |||||    
T  2206614 ttgga 2206618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 363 - 451
Target Start/End: Complemental strand, 31671180 - 31671092
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    ||||||||||   ||| ||||| |||||||||||||| |||||||||||| ||| ||||  | |||| | |||||||||||||| ||||    
T  31671180 aaagataaaacaaagttaaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaa 31671092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 555
Target Start/End: Original strand, 103542 - 103585
Alignment:
Q  512 cttatgctaatagataagctcaaataaaacaatccaaacaggct 555  Q
    |||||||||||| ||||||||||||||  |||||||||||||||    
T  103542 cttatgctaatatataagctcaaataagtcaatccaaacaggct 103585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 415
Target Start/End: Original strand, 5550109 - 5550148
Alignment:
Q  376 agtcaaattcttttcatataagctctaagctgttttcata 415  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  5550109 agtcaaattgttttcatataagctataagctgttttcata 5550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 427
Target Start/End: Complemental strand, 33787878 - 33787787
Alignment:
Q  336 ttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttgga 427  Q
    ||||||||||||  | ||||| |||| ||| ||||||   |||||||||  ||||||||||| | ||||||||||||||||| ||| |||||    
T  33787878 ttttatgtataaactatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttgga 33787787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 460
Target Start/End: Complemental strand, 34430529 - 34430470
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||| |||||||||||||||| ||||| ||  |||||||||||||| |||| ||||||||    
T  34430529 taaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatg 34430470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 835317 - 835267
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    ||||| ||||||||||||||| ||||| ||| |||||||||||||| ||||    
T  835317 taagcagttttcataagctatcttggagaacttatgaaaataagctgaaaa 835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 420
Target Start/End: Complemental strand, 2027517 - 2027455
Alignment:
Q  358 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 420  Q
    |||| |||||||||||  ||||||| | ||||||||||| || ||||||||| ||||||||||    
T  2027517 taacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagcta 2027455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 408 - 538
Target Start/End: Original strand, 2455819 - 2455948
Alignment:
Q  408 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttacc 507  Q
    |||||||||||||| ||||| | | |||| ||||||| | ||||||| |||||| | ||| ||| | ||||||| |||||||||||  |||| |||  |     
T  2455819 ttttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataag-ttgtttccataagctcttctaaacaatctcgca 2455917  T
Q  508 aatgcttatgctaatagataagctcaaataa 538  Q
    | |||||||||   |||||||||||||||||    
T  2455918 agtgcttatgccggtagataagctcaaataa 2455948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 421
Target Start/End: Complemental strand, 2728002 - 2727904
Alignment:
Q  323 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||| |||||||  ||||||||||| || |||| |||| |||||||||    | ||||||| | || ||||||||| |||| ||||||||||||||||    
T  2728002 ttatcatataagtgcttatgtataagctgcttctataacaaaagataaacaaaaatcaaattgtattgatataagctataagttgttttcataagctat 2727904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 492
Target Start/End: Original strand, 4420609 - 4420735
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 462  Q
    |||||||||||  ||||||| | ||||  ||||||||  ||| | ||||| |||||||| ||||| | | |||| ||||||||| |||| |||||||| |    
T  4420609 aaagataaaataaagtcaaactatttttgtataagct--aagttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaa 4420706  T
Q  463 cgtgttatatgtttgtttctataagctctt 492  Q
    | ||| |||  |||||||||||||||||||    
T  4420707 catgtcataa-tttgtttctataagctctt 4420735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 428
Target Start/End: Original strand, 9604812 - 9604878
Alignment:
Q  362 taaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggat 428  Q
    |||||||| |||  ||| ||||| ||||  |||||||| ||||||||||||||||| ||||||||||    
T  9604812 taaagatataataaagtaaaattatttttgtataagctataagctgttttcataagttattttggat 9604878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 14492266 - 14492320
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 417  Q
    |||||||||||  ||||||||| |||| ||| ||||| |||||||||||||||||    
T  14492266 aaagataaaatgaagtcaaattgttttgatacaagctataagctgttttcataag 14492320  T

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Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 407
Target Start/End: Complemental strand, 27615377 - 27615335
Alignment:
Q  365 agataaaatcgagtcaaattcttttcatataagctctaagctg 407  Q
    |||||||||  |||||||||||||||||||||||| |||||||    
T  27615377 agataaaataaagtcaaattcttttcatataagctgtaagctg 27615335  T

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Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 414
Target Start/End: Complemental strand, 27693544 - 27693494
Alignment:
Q  364 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcat 414  Q
    ||||||||||  ||||||||| |||||||||||||| ||||||| ||||||    
T  27693544 aagataaaataaagtcaaattattttcatataagctgtaagctgatttcat 27693494  T

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Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 31624085 - 31624151
Alignment:
Q  394 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 460  Q
    |||||| ||||||||||||||| ||||| ||||| ||  |||||||||||| | |||| ||||||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatg 31624151  T

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Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 837322 - 837233
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaat 452  Q
    ||||||||||  |||| ||||| ||||  | |||||| ||||  |||||||| |||||| ||||| ||| |||||||||||||| |||||    
T  837322 aaagataaaacagagttaaattgttttggtgtaagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaat 837233  T

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Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 421
Target Start/End: Original strand, 1402949 - 1403018
Alignment:
Q  352 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||| |||| |||||||||||  ||| ||| | |||||||||||||| |||  ||||||||||||||||    
T  1402949 tttctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctat 1403018  T

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Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 363 - 451
Target Start/End: Complemental strand, 7785848 - 7785762
Alignment:
Q  363 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 451  Q
    |||||||||||  ||||||| |||||||||||||||| |||  ||| |||||  ||||||||||| | | |||| ||||||||| ||||    
T  7785848 aaagataaaataaagtcaaactcttttcatataagctataaattgtcttcat--gctattttggagagcttatggaaataagctgaaaa 7785762  T

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Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 9668096 - 9667991
Alignment:
Q  358 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 457  Q
    |||| |||||||| || ||||| |||| ||||||||||||||  ||  ||||||||||| || ||| ||| | | |||| ||||||| | |||| |||||    
T  9668096 taacaaaagataacatagagtcgaattgttttcatataagctacaatttgttttcataaactgtttcggagagcttatggaaataagttgaaaacagctt 9667997  T
Q  458 atggac 463  Q
    ||||||    
T  9667996 atggac 9667991  T

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Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 20672006 - 20671913
Alignment:
Q  328 gtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 421  Q
    ||||||||  ||||||||||| | |||||  | | |||||||||||  ||||||||| ||||| |||||||| |||  ||||||||||| ||||    
T  20672006 gtataagtgattatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataagctttaaattgttttcataaactat 20671913  T

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Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 438 - 471
Target Start/End: Complemental strand, 27924634 - 27924601
Alignment:
Q  438 aaataagctaaaaatagcttatggacgtgttata 471  Q
    |||||||||||||||| |||||||||||||||||    
T  27924634 aaataagctaaaaataacttatggacgtgttata 27924601  T

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Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 394 - 471
Target Start/End: Complemental strand, 28641824 - 28641747
Alignment:
Q  394 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttata 471  Q
    |||||| ||| |||||||||  ||||||| || | | | ||||||||||||||||||| |||||||| || |||||||    
T  28641824 taagctataaactgttttcaatagctattctgcagagcttatgaaaataagctaaaaacagcttatgaacatgttata 28641747  T

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Target: scaffold0024 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 338 - 426
Target Start/End: Original strand, 27515 - 27603
Alignment:
Q  338 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttgg 426  Q
    ||||||||||||| ||||| ||||  ||||||||||  ||||||||| ||||||||||| || |||| ||||||||||| |||| ||||    
T  27515 ttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatcttgg 27603  T

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Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 21353 - 21304
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaa 450  Q
    ||||||||||||||||||||| ||||| ||  ||||||||||| ||||||    
T  21353 taagctgttttcataagctatattggagaaattatgaaaataaactaaaa 21304  T

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Target: scaffold0100 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 320 - 422
Target Start/End: Original strand, 42538 - 42639
Alignment:
Q  320 catttatcgtataagtttttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagct 419  Q
    |||||||| |||||||  ||||||||||||  ||||| |||| ||||||||||| |||| |||    ||||||||||||| | || ||||||||||||||    
T  42538 catttatcatataagtgcttatgtataagtcatttctataacaaaagataaaatagagt-aaacctgtttcatataagctattagttgttttcataagct 42636  T
Q  420 att 422  Q
    |||    
T  42637 att 42639  T

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Target: scaffold0221 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 22233 - 22290
Alignment:
Q  401 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 458  Q
    ||||||||| ||||||||||| ||||| ||| |||||||||||||| |||| ||||||    
T  22233 taagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagctta 22290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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