View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3029R-Insertion-4 (Length: 920)

Name: NF3029R-Insertion-4
Description: NF3029R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3029R-Insertion-4
NF3029R-Insertion-4
[»] chr8 (42 HSPs)
chr8 (158-606)||(38873662-38874108)
chr8 (637-872)||(38873439-38873674)
chr8 (7-90)||(38874178-38874261)
chr8 (875-914)||(37419935-37419974)
chr8 (876-914)||(5946043-5946081)
chr8 (877-914)||(32984225-32984262)
chr8 (877-914)||(41653892-41653929)
chr8 (878-914)||(22878389-22878425)
chr8 (878-914)||(41862218-41862254)
chr8 (878-914)||(45236713-45236749)
chr8 (879-914)||(6365985-6366020)
chr8 (879-914)||(12032951-12032986)
chr8 (879-914)||(37301473-37301508)
chr8 (879-914)||(37956420-37956455)
chr8 (879-914)||(43328706-43328741)
chr8 (880-914)||(2275913-2275947)
chr8 (876-914)||(17718870-17718908)
chr8 (877-911)||(25248036-25248070)
chr8 (876-914)||(27243276-27243314)
chr8 (876-914)||(27254851-27254889)
chr8 (880-914)||(40435301-40435335)
chr8 (881-914)||(2714550-2714583)
chr8 (881-914)||(31831103-31831136)
chr8 (878-914)||(2379138-2379174)
chr8 (874-914)||(26196453-26196493)
chr8 (878-914)||(31149027-31149063)
chr8 (874-914)||(33896980-33897019)
chr8 (875-914)||(117466-117505)
chr8 (879-914)||(9713688-9713723)
chr8 (879-914)||(13760796-13760831)
chr8 (879-914)||(24080049-24080084)
chr8 (879-914)||(31940314-31940349)
chr8 (879-914)||(33730789-33730824)
chr8 (879-914)||(41231945-41231980)
chr8 (880-914)||(9013684-9013718)
chr8 (880-914)||(9303722-9303756)
chr8 (880-910)||(9734255-9734285)
chr8 (876-914)||(10378305-10378343)
chr8 (878-911)||(29048554-29048587)
chr8 (885-914)||(32114254-32114283)
chr8 (881-914)||(39901574-39901607)
chr8 (881-914)||(42701438-42701471)
[»] chr1 (66 HSPs)
chr1 (638-770)||(27795926-27796056)
chr1 (874-914)||(24245173-24245213)
chr1 (874-914)||(26277171-26277211)
chr1 (874-914)||(38332007-38332047)
chr1 (875-914)||(6327695-6327734)
chr1 (876-914)||(48373500-48373538)
chr1 (877-914)||(23984752-23984789)
chr1 (877-914)||(25058685-25058722)
chr1 (877-914)||(27983735-27983772)
chr1 (869-914)||(29770659-29770704)
chr1 (877-914)||(44661967-44662004)
chr1 (877-914)||(46616546-46616583)
chr1 (874-914)||(17995099-17995139)
chr1 (877-917)||(23994845-23994885)
chr1 (874-914)||(24885495-24885535)
chr1 (878-914)||(31307999-31308035)
chr1 (878-914)||(33112965-33113001)
chr1 (878-914)||(35692812-35692848)
chr1 (878-914)||(45538151-45538187)
chr1 (874-914)||(46967189-46967229)
chr1 (879-914)||(4156213-4156248)
chr1 (879-914)||(5980067-5980102)
chr1 (879-914)||(5981169-5981204)
chr1 (879-914)||(23221077-23221112)
chr1 (879-914)||(31040708-31040743)
chr1 (876-911)||(47671582-47671617)
chr1 (879-914)||(49254123-49254158)
chr1 (877-911)||(2556997-2557031)
chr1 (876-914)||(3611132-3611170)
chr1 (864-914)||(13281699-13281749)
chr1 (880-914)||(26525037-26525071)
chr1 (876-914)||(42234836-42234874)
chr1 (880-914)||(51403155-51403189)
chr1 (878-911)||(3285400-3285433)
chr1 (877-914)||(26472316-26472353)
chr1 (873-914)||(31980083-31980124)
chr1 (877-914)||(51057068-51057105)
chr1 (874-914)||(33073205-33073245)
chr1 (878-914)||(41999813-41999849)
chr1 (875-914)||(4068831-4068870)
chr1 (879-914)||(23932657-23932692)
chr1 (879-914)||(26685855-26685890)
chr1 (444-555)||(27795745-27795856)
chr1 (879-914)||(36566329-36566364)
chr1 (879-914)||(37620340-37620375)
chr1 (879-914)||(39637899-39637934)
chr1 (879-914)||(39646567-39646602)
chr1 (879-914)||(41467769-41467804)
chr1 (879-914)||(49399136-49399171)
chr1 (880-914)||(6626161-6626195)
chr1 (880-914)||(21139560-21139594)
chr1 (877-911)||(24649862-24649896)
chr1 (880-914)||(33884088-33884122)
chr1 (880-914)||(33960130-33960164)
chr1 (880-914)||(34752451-34752485)
chr1 (874-912)||(36030736-36030774)
chr1 (880-914)||(46784423-46784457)
chr1 (880-914)||(47383880-47383914)
chr1 (877-914)||(2657300-2657337)
chr1 (877-914)||(10928064-10928101)
chr1 (881-914)||(25518815-25518848)
chr1 (881-914)||(28888582-28888615)
chr1 (878-911)||(31844374-31844407)
chr1 (881-914)||(38790345-38790378)
chr1 (875-904)||(47187100-47187129)
chr1 (881-914)||(50774218-50774251)
[»] chr7 (54 HSPs)
chr7 (723-794)||(31524715-31524786)
chr7 (874-914)||(33332784-33332824)
chr7 (876-914)||(45063503-45063541)
chr7 (876-914)||(48609825-48609863)
chr7 (877-914)||(22979795-22979832)
chr7 (877-914)||(46913107-46913144)
chr7 (877-914)||(47740479-47740516)
chr7 (878-914)||(33839863-33839899)
chr7 (878-914)||(45482657-45482693)
chr7 (879-914)||(10028488-10028523)
chr7 (879-914)||(35767481-35767516)
chr7 (876-914)||(2341810-2341848)
chr7 (877-911)||(19563445-19563479)
chr7 (877-911)||(33695972-33696006)
chr7 (877-911)||(42272149-42272183)
chr7 (881-914)||(20165962-20165995)
chr7 (877-914)||(25894065-25894102)
chr7 (878-911)||(27018115-27018148)
chr7 (877-914)||(46817558-46817595)
chr7 (881-914)||(49171510-49171543)
chr7 (882-914)||(15877553-15877585)
chr7 (878-914)||(16482920-16482956)
chr7 (878-914)||(17855427-17855463)
chr7 (878-914)||(24228540-24228576)
chr7 (879-911)||(31586848-31586880)
chr7 (878-914)||(32556743-32556779)
chr7 (878-914)||(33411259-33411295)
chr7 (878-914)||(33423423-33423459)
chr7 (878-914)||(33720184-33720220)
chr7 (878-914)||(35355887-35355923)
chr7 (878-914)||(36816982-36817018)
chr7 (874-914)||(37846164-37846204)
chr7 (879-911)||(40670563-40670595)
chr7 (879-914)||(10618298-10618333)
chr7 (879-914)||(24923161-24923196)
chr7 (879-914)||(26579865-26579900)
chr7 (879-914)||(29610635-29610670)
chr7 (879-914)||(30077073-30077108)
chr7 (875-914)||(35484632-35484671)
chr7 (879-914)||(35752171-35752206)
chr7 (879-914)||(39323616-39323651)
chr7 (879-914)||(47067125-47067160)
chr7 (879-914)||(47906896-47906931)
chr7 (879-914)||(48085858-48085893)
chr7 (879-913)||(31429624-31429658)
chr7 (876-914)||(44003507-44003545)
chr7 (446-544)||(46521884-46521981)
chr7 (873-914)||(498325-498366)
chr7 (877-914)||(5712166-5712203)
chr7 (881-914)||(23393199-23393232)
chr7 (877-910)||(25037649-25037682)
chr7 (881-914)||(31625706-31625739)
chr7 (881-914)||(39866667-39866700)
chr7 (878-911)||(44659843-44659876)
[»] chr3 (66 HSPs)
chr3 (635-761)||(7493619-7493744)
chr3 (873-914)||(24100276-24100317)
chr3 (874-914)||(32234545-32234585)
chr3 (870-914)||(47257783-47257827)
chr3 (875-914)||(37313394-37313433)
chr3 (876-914)||(5560180-5560218)
chr3 (876-914)||(51102526-51102564)
chr3 (877-914)||(29625975-29626012)
chr3 (877-914)||(40131107-40131144)
chr3 (877-914)||(41464349-41464386)
chr3 (877-914)||(43125828-43125865)
chr3 (878-914)||(22399095-22399131)
chr3 (874-914)||(39053388-39053428)
chr3 (878-914)||(42291840-42291876)
chr3 (878-914)||(49330035-49330071)
chr3 (879-914)||(2665999-2666034)
chr3 (879-914)||(7755454-7755489)
chr3 (879-914)||(44806683-44806718)
chr3 (876-914)||(7855262-7855300)
chr3 (876-914)||(25353550-25353588)
chr3 (880-914)||(27067126-27067160)
chr3 (876-914)||(34279858-34279896)
chr3 (876-914)||(40804658-40804696)
chr3 (876-914)||(51224174-51224212)
chr3 (880-914)||(51452898-51452932)
chr3 (880-917)||(39634716-39634753)
chr3 (877-914)||(48546977-48547014)
chr3 (877-914)||(51415966-51416003)
chr3 (877-914)||(52638839-52638876)
chr3 (874-911)||(53943738-53943775)
chr3 (877-914)||(54159136-54159173)
chr3 (877-914)||(54707357-54707394)
chr3 (877-914)||(55453392-55453429)
chr3 (876-912)||(2228074-2228110)
chr3 (878-914)||(25641644-25641680)
chr3 (878-914)||(28048540-28048576)
chr3 (882-914)||(41293466-41293498)
chr3 (878-914)||(43612195-43612231)
chr3 (879-914)||(20754541-20754576)
chr3 (879-914)||(24376572-24376607)
chr3 (879-914)||(40419834-40419869)
chr3 (879-914)||(41635937-41635972)
chr3 (879-914)||(42589829-42589864)
chr3 (879-914)||(47809745-47809780)
chr3 (879-914)||(51942553-51942588)
chr3 (879-914)||(52434138-52434173)
chr3 (879-914)||(52628953-52628988)
chr3 (879-914)||(53115446-53115481)
chr3 (880-911)||(53637841-53637872)
chr3 (879-914)||(55379984-55380019)
chr3 (876-910)||(21597289-21597323)
chr3 (876-914)||(28576249-28576287)
chr3 (879-909)||(36368938-36368968)
chr3 (876-914)||(37324537-37324575)
chr3 (880-914)||(38156769-38156803)
chr3 (877-911)||(41732525-41732559)
chr3 (877-911)||(51170184-51170218)
chr3 (880-914)||(53832632-53832666)
chr3 (877-914)||(17665661-17665698)
chr3 (877-914)||(30251638-30251675)
chr3 (881-914)||(31286930-31286963)
chr3 (881-914)||(41882128-41882161)
chr3 (881-914)||(43021715-43021748)
chr3 (881-914)||(46134357-46134390)
chr3 (877-914)||(49130575-49130612)
chr3 (881-914)||(52215077-52215110)
[»] chr6 (26 HSPs)
chr6 (869-914)||(11743092-11743137)
chr6 (875-914)||(22551209-22551248)
chr6 (877-914)||(1970708-1970745)
chr6 (877-914)||(8615237-8615274)
chr6 (877-914)||(16703363-16703400)
chr6 (878-914)||(599890-599926)
chr6 (878-914)||(19415681-19415717)
chr6 (878-914)||(28947085-28947121)
chr6 (879-914)||(5882505-5882540)
chr6 (879-914)||(19281203-19281238)
chr6 (879-914)||(30467751-30467786)
chr6 (880-914)||(960052-960086)
chr6 (878-911)||(929657-929690)
chr6 (881-914)||(2892189-2892222)
chr6 (877-914)||(13329378-13329415)
chr6 (877-914)||(28948982-28949019)
chr6 (881-914)||(30743596-30743629)
chr6 (878-914)||(7167580-7167616)
chr6 (878-914)||(14891527-14891563)
chr6 (879-911)||(24168090-24168122)
chr6 (879-914)||(7345260-7345295)
chr6 (879-914)||(10508056-10508091)
chr6 (883-914)||(18101643-18101674)
chr6 (881-914)||(3291009-3291042)
chr6 (877-910)||(7393738-7393771)
chr6 (881-914)||(33452720-33452753)
[»] chr5 (38 HSPs)
chr5 (870-914)||(25831511-25831555)
chr5 (876-914)||(24253378-24253416)
chr5 (877-914)||(43326527-43326564)
chr5 (878-914)||(3466829-3466865)
chr5 (878-914)||(5137713-5137749)
chr5 (875-911)||(12558169-12558205)
chr5 (874-914)||(40886175-40886215)
chr5 (874-914)||(43262331-43262371)
chr5 (879-914)||(5184971-5185006)
chr5 (877-910)||(739856-739889)
chr5 (877-914)||(4149691-4149728)
chr5 (877-914)||(6901796-6901833)
chr5 (881-914)||(15398630-15398663)
chr5 (881-914)||(18479816-18479849)
chr5 (877-914)||(27503376-27503413)
chr5 (877-914)||(36472421-36472458)
chr5 (869-914)||(40110223-40110268)
chr5 (875-911)||(890901-890937)
chr5 (878-914)||(1402642-1402678)
chr5 (878-914)||(7722047-7722083)
chr5 (878-914)||(13957668-13957704)
chr5 (875-911)||(27501206-27501242)
chr5 (878-914)||(38638047-38638083)
chr5 (878-914)||(42247919-42247955)
chr5 (879-914)||(2585461-2585496)
chr5 (879-914)||(9424729-9424764)
chr5 (879-914)||(24167921-24167956)
chr5 (879-910)||(27278629-27278660)
chr5 (879-914)||(35626037-35626072)
chr5 (879-914)||(36365582-36365617)
chr5 (879-914)||(39932578-39932613)
chr5 (879-914)||(40632498-40632533)
chr5 (880-914)||(6973063-6973097)
chr5 (876-914)||(19295726-19295764)
chr5 (881-914)||(9527157-9527190)
chr5 (877-914)||(27938894-27938931)
chr5 (881-914)||(38015651-38015684)
chr5 (877-914)||(42658799-42658836)
[»] chr4 (71 HSPs)
chr4 (874-914)||(41632154-41632194)
chr4 (874-914)||(51363001-51363041)
chr4 (877-914)||(29478357-29478394)
chr4 (873-914)||(37239227-37239268)
chr4 (877-914)||(41702607-41702644)
chr4 (877-914)||(47344653-47344690)
chr4 (873-914)||(48313550-48313591)
chr4 (877-914)||(54805766-54805803)
chr4 (874-914)||(11972266-11972306)
chr4 (878-914)||(14017522-14017558)
chr4 (878-914)||(17555634-17555670)
chr4 (878-914)||(23437590-23437626)
chr4 (878-914)||(39077543-39077579)
chr4 (878-914)||(49881211-49881247)
chr4 (879-914)||(2243457-2243492)
chr4 (879-914)||(29777405-29777440)
chr4 (879-914)||(31070221-31070256)
chr4 (879-914)||(41949381-41949416)
chr4 (879-914)||(43471843-43471878)
chr4 (879-914)||(50457958-50457993)
chr4 (879-914)||(53854577-53854612)
chr4 (879-914)||(55056407-55056442)
chr4 (880-914)||(146577-146611)
chr4 (880-914)||(18462161-18462195)
chr4 (876-914)||(31532283-31532321)
chr4 (869-911)||(47662253-47662295)
chr4 (877-911)||(50233997-50234031)
chr4 (877-914)||(2826829-2826866)
chr4 (877-910)||(3170623-3170656)
chr4 (881-914)||(6019929-6019962)
chr4 (877-914)||(21366757-21366794)
chr4 (881-914)||(22468918-22468951)
chr4 (881-914)||(22618660-22618693)
chr4 (877-914)||(34835174-34835211)
chr4 (877-914)||(42033172-42033209)
chr4 (877-914)||(42085204-42085241)
chr4 (881-914)||(42222292-42222325)
chr4 (881-914)||(42557583-42557616)
chr4 (878-914)||(237475-237511)
chr4 (874-914)||(9798459-9798499)
chr4 (874-914)||(15060426-15060466)
chr4 (878-914)||(32366808-32366844)
chr4 (879-911)||(42765992-42766024)
chr4 (874-914)||(50536772-50536812)
chr4 (875-911)||(54216308-54216344)
chr4 (879-914)||(397401-397436)
chr4 (879-910)||(407753-407784)
chr4 (879-914)||(1662396-1662431)
chr4 (875-914)||(3293160-3293199)
chr4 (879-914)||(3692358-3692393)
chr4 (879-914)||(27373075-27373110)
chr4 (879-914)||(27873685-27873720)
chr4 (875-914)||(33897643-33897681)
chr4 (879-914)||(34552318-34552353)
chr4 (879-914)||(38591667-38591702)
chr4 (879-914)||(39587927-39587962)
chr4 (879-914)||(54607961-54607996)
chr4 (879-914)||(56023146-56023181)
chr4 (880-914)||(5117575-5117609)
chr4 (880-914)||(6285307-6285341)
chr4 (880-914)||(34276547-34276581)
chr4 (880-914)||(35446506-35446540)
chr4 (881-914)||(20351979-20352012)
chr4 (873-914)||(26091406-26091447)
chr4 (881-914)||(27580120-27580153)
chr4 (877-914)||(45633916-45633953)
chr4 (881-914)||(48259658-48259691)
chr4 (881-914)||(50534632-50534665)
chr4 (877-914)||(53461964-53462001)
chr4 (881-914)||(53834202-53834235)
chr4 (877-914)||(54575088-54575125)
[»] chr2 (52 HSPs)
chr2 (866-914)||(4034577-4034625)
chr2 (875-914)||(12814608-12814647)
chr2 (876-914)||(26710340-26710378)
chr2 (876-914)||(40735459-40735497)
chr2 (877-914)||(6594606-6594643)
chr2 (877-914)||(27400399-27400436)
chr2 (877-914)||(32608376-32608413)
chr2 (878-914)||(10424592-10424628)
chr2 (878-914)||(13815366-13815402)
chr2 (874-914)||(15925073-15925113)
chr2 (878-914)||(28019969-28020005)
chr2 (879-914)||(746464-746499)
chr2 (879-914)||(2325037-2325072)
chr2 (879-914)||(27024413-27024448)
chr2 (879-914)||(27651182-27651217)
chr2 (637-761)||(35494343-35494462)
chr2 (876-914)||(2000474-2000512)
chr2 (880-914)||(7892836-7892870)
chr2 (868-914)||(34518354-34518400)
chr2 (880-914)||(38997100-38997134)
chr2 (877-914)||(2688866-2688903)
chr2 (877-914)||(12333632-12333669)
chr2 (877-914)||(17600832-17600869)
chr2 (877-914)||(23901775-23901812)
chr2 (881-914)||(32327361-32327394)
chr2 (874-914)||(1229628-1229668)
chr2 (878-914)||(37621018-37621054)
chr2 (879-911)||(45370988-45371020)
chr2 (879-914)||(6430471-6430506)
chr2 (879-914)||(10244730-10244765)
chr2 (879-914)||(11184970-11185005)
chr2 (879-914)||(28641429-28641464)
chr2 (879-914)||(40037141-40037176)
chr2 (879-914)||(40635216-40635251)
chr2 (879-914)||(43356097-43356132)
chr2 (879-914)||(44481826-44481861)
chr2 (880-914)||(145281-145315)
chr2 (880-910)||(5726128-5726158)
chr2 (877-911)||(8433067-8433101)
chr2 (880-914)||(10176558-10176592)
chr2 (880-914)||(14660445-14660479)
chr2 (880-914)||(32948445-32948479)
chr2 (878-908)||(37255486-37255516)
chr2 (876-914)||(39103042-39103080)
chr2 (877-911)||(40544216-40544250)
chr2 (881-914)||(4609626-4609659)
chr2 (881-914)||(9444683-9444716)
chr2 (881-914)||(12842103-12842136)
chr2 (881-914)||(27331298-27331331)
chr2 (881-914)||(33427795-33427828)
chr2 (881-914)||(35158187-35158220)
chr2 (881-914)||(39301334-39301367)
[»] scaffold2003 (1 HSPs)
scaffold2003 (875-914)||(97-136)
[»] scaffold0155 (1 HSPs)
scaffold0155 (879-914)||(2580-2615)
[»] scaffold0100 (1 HSPs)
scaffold0100 (879-914)||(32560-32595)
[»] scaffold0092 (1 HSPs)
scaffold0092 (879-914)||(39704-39739)
[»] scaffold0035 (1 HSPs)
scaffold0035 (879-914)||(75392-75427)
[»] scaffold0394 (1 HSPs)
scaffold0394 (881-914)||(3089-3122)
[»] scaffold0721 (1 HSPs)
scaffold0721 (874-914)||(7084-7124)
[»] scaffold0076 (1 HSPs)
scaffold0076 (879-911)||(13913-13945)
[»] scaffold0198 (1 HSPs)
scaffold0198 (879-914)||(19002-19037)
[»] scaffold0150 (1 HSPs)
scaffold0150 (875-914)||(14739-14778)
[»] scaffold0007 (1 HSPs)
scaffold0007 (879-914)||(278005-278040)
[»] scaffold0125 (1 HSPs)
scaffold0125 (880-914)||(20614-20648)
[»] scaffold0684 (1 HSPs)
scaffold0684 (877-914)||(4692-4729)
[»] scaffold0163 (1 HSPs)
scaffold0163 (877-914)||(3389-3426)


Alignment Details
Target: chr8 (Bit Score: 383; Significance: 0; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 158 - 606
Target Start/End: Complemental strand, 38874108 - 38873662
Alignment:
Q  158 caattatgcttcatattatactattacttaaaataaaataaatccaatcttatacnnnnnnngggattttcttttaccacccttcctcgaattttctttg 257  Q
    ||||||||||||| ||||||   ||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  38874108 caattatgcttcacattata---ttagttaaaataaaataaatccaatcttatactttttttgggattttcttttaccacccttcctcgaattttctttg 38874012  T
Q  258 agagagaggtccagaaggcccaaaactaaacaaggatcctatttttcttagaaattgctatatggaccgtttgcttgctcaaatacctcttgaaattcta 357  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38874011 agagagaggtctagaaggcccaaaactaaacaaggatcctatttttcttagaaattgctatatggaccgtctgcttgctcaaatacctcttgaaattcta 38873912  T
Q  358 aaagcgtcctttatacaacagtcaagatttttgattttatgagatcgaaagatgtctattgagcattatgtattagaatatatg-tttgatctgtttcaa 456  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38873911 aaagcgtcctttatacaacagtcaagatttttgattttatgagatcgaaagatgtctattgagcattatgtattagaatatatgttttgatctgtttcaa 38873812  T
Q  457 aataataccataacataaactttgttctcatgtgcacgacaattgattcaaaacataaaaaacttgagttcttgacattcaaacactctccttacttcat 556  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38873811 aataataccataacataaactttgttctcatgtgcgcgacaattgattcaaaacataaaaaacttgagttcttgacattcaaacactctccttacttcat 38873712  T
Q  557 tcaaacactcttcacatttattctcaagcccaacaattaagtgttaactt 606  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38873711 tcaaacactcttcacatttattctcaagcccatcaattaagtgttaactt 38873662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 637 - 872
Target Start/End: Complemental strand, 38873674 - 38873439
Alignment:
Q  637 taagtgttaacttcctctcattttgtttttgttggaggttagagtttttctagtcaccgatcaagtagagattgtctatggtttgtatgtagtttaggaa 736  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38873674 taagtgttaacttcctctcattttgtttttgttggaggttagagtttttctagtcaccgatcaagtagagattgtctaaggtttgtatgtagtttaggaa 38873575  T
Q  737 ttttgtagttgttgatcaagtagaacgcgaatgtagtttaggttttgaattagtgaaatgtggtatcaagattttgtttaggattgtgaatattattttt 836  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38873574 ttttgtagttgttgatcaagtagaacacgaatgtagtttaggttttgaattagtgaaatgtgatatcaagattttgtttaggattgtgaatattattttt 38873475  T
Q  837 gtgatatatgtgtttaatgaaaagcttaaatgatta 872  Q
    ||||||||||||||||||||||||||||||||||||    
T  38873474 gtgatatatgtgtttaatgaaaagcttaaatgatta 38873439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 38874261 - 38874178
Alignment:
Q  7 catagcgaatggtagatgttgttggaatggagattcgaacgggatgcgtaggataagcagagaaggcgcacgttatgctcaaca 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38874261 catagcgaatggtagatgttgttggaatggagattcgaacgggatgcgtaggataagcagagaaggcgcacgttatgctcaaca 38874178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 875 - 914
Target Start/End: Original strand, 37419935 - 37419974
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37419935 ttaaggttttttctagattacctttgaagaatggtgggta 37419974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 876 - 914
Target Start/End: Original strand, 5946043 - 5946081
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5946043 taaggttttttctagattacctttgaagaatggtgggta 5946081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 32984262 - 32984225
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32984262 aaggttttttctagattacctttgaagaatggtgggta 32984225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 41653892 - 41653929
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41653892 aaggttttttctagattacctttgaagaatggtgggta 41653929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 22878389 - 22878425
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  22878389 aggttttttctagattacctttgaagaatggtgggta 22878425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 41862218 - 41862254
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  41862218 aggttttttctagattacctttgaagaatggtgggta 41862254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 45236749 - 45236713
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  45236749 aggttttttctagattacctttgaagaatggtgggta 45236713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 6365985 - 6366020
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  6365985 ggttttttctagattacctttgaagaatggtgggta 6366020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 12032951 - 12032986
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  12032951 ggttttttctagattacctttgaagaatggtgggta 12032986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 37301508 - 37301473
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  37301508 ggttttttctagattacctttgaagaatggtgggta 37301473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 37956420 - 37956455
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  37956420 ggttttttctagattacctttgaagaatggtgggta 37956455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 43328706 - 43328741
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  43328706 ggttttttctagattacctttgaagaatggtgggta 43328741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 2275913 - 2275947
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||    
T  2275913 gttttttctagattacctttgaagaatggtgggta 2275947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 17718908 - 17718870
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  17718908 taagattttttctagattacctttgaagaatggtgggta 17718870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 877 - 911
Target Start/End: Original strand, 25248036 - 25248070
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||||    
T  25248036 aaggttttttctagattacctttgaagaatggtgg 25248070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 27243314 - 27243276
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  27243314 taaggttttttctaaattacctttgaagaatggtgggta 27243276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 27254889 - 27254851
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  27254889 taaggttttttctaaattacctttgaagaatggtgggta 27254851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 40435335 - 40435301
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||    
T  40435335 gttttttctagattacctttgaagaatggtgggta 40435301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 2714550 - 2714583
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  2714550 ttttttctagattacctttgaagaatggtgggta 2714583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 31831136 - 31831103
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  31831136 ttttttctagattacctttgaagaatggtgggta 31831103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 2379138 - 2379174
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||| ||||||||||||||||||||||||    
T  2379138 aggttttttctaaattacctttgaagaatggtgggta 2379174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 26196493 - 26196453
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  26196493 tttaaggttttttttagattacctttgaaaaatggtgggta 26196453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 31149063 - 31149027
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||| |||||||||||    
T  31149063 aggttttttctagattacctttgaaaaatggtgggta 31149027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 33897019 - 33896980
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  33897019 tttaaggttttttctagattacctttgaa-aatggtgggta 33896980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 875 - 914
Target Start/End: Complemental strand, 117505 - 117466
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  117505 ttaagattttttctaaattacctttgaagaatggtgggta 117466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 9713688 - 9713723
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9713688 ggttttttctaaattacctttgaagaatggtgggta 9713723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 13760831 - 13760796
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||| ||||||||||||||||||||||||||    
T  13760831 ggttttttcaagattacctttgaagaatggtgggta 13760796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 24080084 - 24080049
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||| |||||||||||||||||||||||||||    
T  24080084 ggttttttgtagattacctttgaagaatggtgggta 24080049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 31940314 - 31940349
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31940314 ggttttttctaaattacctttgaagaatggtgggta 31940349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 33730824 - 33730789
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||| |||||||||||||||||||    
T  33730824 ggttttttctagattatctttgaagaatggtgggta 33730789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 41231945 - 41231980
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||| |||||||||||||||||||    
T  41231945 ggttttttctagattatctttgaagaatggtgggta 41231980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 9013684 - 9013718
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||| ||||    
T  9013684 gttttttctagattacctttgaagaatggtaggta 9013718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 9303756 - 9303722
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||| |||||||||||||||||||||||||||    
T  9303756 gttttttttagattacctttgaagaatggtgggta 9303722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 910
Target Start/End: Original strand, 9734255 - 9734285
Alignment:
Q  880 gttttttctagattacctttgaagaatggtg 910  Q
    |||||||||||||||||||||||||||||||    
T  9734255 gttttttctagattacctttgaagaatggtg 9734285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 876 - 914
Target Start/End: Original strand, 10378305 - 10378343
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  10378305 taaggttttttctaaattacctttgaaaaatggtgggta 10378343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 878 - 911
Target Start/End: Complemental strand, 29048587 - 29048554
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgg 911  Q
    ||||||||||||||||| ||||||||||||||||    
T  29048587 aggttttttctagattatctttgaagaatggtgg 29048554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 885 - 914
Target Start/End: Original strand, 32114254 - 32114283
Alignment:
Q  885 ttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||    
T  32114254 ttctagattacctttgaagaatggtgggta 32114283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 39901574 - 39901607
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||| ||||||||||||||    
T  39901574 ttttttctagattacctttaaagaatggtgggta 39901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 42701471 - 42701438
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||| |||||||||||    
T  42701471 ttttttctagattacctttgaataatggtgggta 42701438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 2e-18; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 638 - 770
Target Start/End: Original strand, 27795926 - 27796056
Alignment:
Q  638 aagtgttaacttcctctcattttgtttttgttggaggttagagtttttctagtcaccgatcaagtagagattgtctatggtttgtatgtagtttaggaat 737  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||  |||    ||| ||||| | ||||| || |||||| ||||||||||||||     
T  27795926 aagtgtttacttcctctcattttgtttttgttgaaggttagggttttt-gagttgttgatgaagtaaaaattgtttagggtttgaatgtagtttaggaa- 27796023  T
Q  738 tttgtagttgttgatcaagtagaacgcgaatgt 770  Q
    ||||||||| |||||||||||||| | ||||||    
T  27796024 tttgtagttattgatcaagtagaatgtgaatgt 27796056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 24245213 - 24245173
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24245213 tttaaggttttttctagattacctttgaagaatggtgggta 24245173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 874 - 914
Target Start/End: Original strand, 26277171 - 26277211
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26277171 tttaaggttttttctagattacctttgaagaatggtgggta 26277211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 38332047 - 38332007
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38332047 tttaaggttttttctagattacctttgaagaatggtgggta 38332007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 875 - 914
Target Start/End: Complemental strand, 6327734 - 6327695
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6327734 ttaaggttttttctagattacctttgaagaatggtgggta 6327695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 876 - 914
Target Start/End: Original strand, 48373500 - 48373538
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48373500 taaggttttttctagattacctttgaagaatggtgggta 48373538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 23984752 - 23984789
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23984752 aaggttttttctagattacctttgaagaatggtgggta 23984789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 25058685 - 25058722
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25058685 aaggttttttctagattacctttgaagaatggtgggta 25058722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 27983772 - 27983735
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27983772 aaggttttttctagattacctttgaagaatggtgggta 27983735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 914
Target Start/End: Original strand, 29770659 - 29770704
Alignment:
Q  869 attactttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  29770659 attaatttaaggttttttctaaattacctttgaagaatggtgggta 29770704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 44661967 - 44662004
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44661967 aaggttttttctagattacctttgaagaatggtgggta 44662004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 46616546 - 46616583
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46616546 aaggttttttctagattacctttgaagaatggtgggta 46616583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 17995139 - 17995099
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  17995139 tttatggttttttctagattacctttgaagaatggtgggta 17995099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 877 - 917
Target Start/End: Original strand, 23994845 - 23994885
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggtattt 917  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  23994845 aaggttttttctagattacctttgaagaatggtggatattt 23994885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 874 - 914
Target Start/End: Original strand, 24885495 - 24885535
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  24885495 tttagggttttttctagattacctttgaagaatggtgggta 24885535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 31307999 - 31308035
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  31307999 aggttttttctagattacctttgaagaatggtgggta 31308035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 33113001 - 33112965
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  33113001 aggttttttctagattacctttgaagaatggtgggta 33112965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 35692848 - 35692812
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  35692848 aggttttttctagattacctttgaagaatggtgggta 35692812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 45538151 - 45538187
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  45538151 aggttttttctagattacctttgaagaatggtgggta 45538187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 46967229 - 46967189
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  46967229 tttatggttttttctagattacctttgaagaatggtgggta 46967189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 4156248 - 4156213
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  4156248 ggttttttctagattacctttgaagaatggtgggta 4156213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 5980067 - 5980102
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  5980067 ggttttttctagattacctttgaagaatggtgggta 5980102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 5981169 - 5981204
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  5981169 ggttttttctagattacctttgaagaatggtgggta 5981204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 23221112 - 23221077
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  23221112 ggttttttctagattacctttgaagaatggtgggta 23221077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 31040708 - 31040743
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  31040708 ggttttttctagattacctttgaagaatggtgggta 31040743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 876 - 911
Target Start/End: Original strand, 47671582 - 47671617
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgg 911  Q
    ||||||||||||||||||||||||||||||||||||    
T  47671582 taaggttttttctagattacctttgaagaatggtgg 47671617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 49254158 - 49254123
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  49254158 ggttttttctagattacctttgaagaatggtgggta 49254123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 877 - 911
Target Start/End: Complemental strand, 2557031 - 2556997
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||||    
T  2557031 aaggttttttctagattacctttgaagaatggtgg 2556997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Original strand, 3611132 - 3611170
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  3611132 taaggttttttctaaattacctttgaagaatggtgggta 3611170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 864 - 914
Target Start/End: Complemental strand, 13281749 - 13281699
Alignment:
Q  864 aaatgattactttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| |||||| ||| |||||||||| ||||||||||||||||||||||||    
T  13281749 aaatcattactataaagttttttctaaattacctttgaagaatggtgggta 13281699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 26525071 - 26525037
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||    
T  26525071 gttttttctagattacctttgaagaatggtgggta 26525037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Original strand, 42234836 - 42234874
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  42234836 taaggttttttctaaattacctttgaagaatggtgggta 42234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 51403189 - 51403155
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||    
T  51403189 gttttttctagattacctttgaagaatggtgggta 51403155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 878 - 911
Target Start/End: Original strand, 3285400 - 3285433
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgg 911  Q
    ||||||||||||||||||||||||||||||||||    
T  3285400 aggttttttctagattacctttgaagaatggtgg 3285433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 26472353 - 26472316
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  26472353 aaggttttttctaaattacctttgaagaatggtgggta 26472316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 873 - 914
Target Start/End: Complemental strand, 31980124 - 31980083
Alignment:
Q  873 ctttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||| | |||||||||||||||||||||||||||||||||    
T  31980124 ctttaaaggtttttctagattacctttgaagaatggtgggta 31980083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 51057068 - 51057105
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  51057068 aaggttttttctaaattacctttgaagaatggtgggta 51057105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 874 - 914
Target Start/End: Original strand, 33073205 - 33073245
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  33073205 tttaaggttttttctaaattacctttgaaaaatggtgggta 33073245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 41999813 - 41999849
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||| |||||||||||    
T  41999813 aggttttttctagattacctttgaaaaatggtgggta 41999849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 875 - 914
Target Start/End: Complemental strand, 4068870 - 4068831
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  4068870 ttaaggctttttctagattacctttgaaaaatggtgggta 4068831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 23932692 - 23932657
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| |||||||||||||||||||||||||    
T  23932692 ggttttttcttgattacctttgaagaatggtgggta 23932657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 26685855 - 26685890
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||| |||||||||||    
T  26685855 ggttttttctagattacctttgaaaaatggtgggta 26685890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 444 - 555
Target Start/End: Original strand, 27795745 - 27795856
Alignment:
Q  444 tgatctgtttcaaaataataccataacataaactttgttctcatgtgcacgacaattgattcaaaacataaaaaacttgagttcttgacattcaaacact 543  Q
    |||||||  ||| ||||||||||||| | || | || ||||||| ||   |||| || ||||| |||||||| || ||||||||||||||| |||||||     
T  27795745 tgatctgcatcagaataataccataaaaaaagcattattctcatatgtttgacactttattcagaacataaataatttgagttcttgacatccaaacacc 27795844  T
Q  544 ctccttacttca 555  Q
    |||| |||||||    
T  27795845 ctccatacttca 27795856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 36566329 - 36566364
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||| |||||||    
T  36566329 ggttttttctagattacctttgaagaatagtgggta 36566364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 37620375 - 37620340
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||| |||||||||||||||||||||||||||    
T  37620375 ggttttttttagattacctttgaagaatggtgggta 37620340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 39637899 - 39637934
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||| ||||||||||||||||    
T  39637899 ggttttttctagattacctatgaagaatggtgggta 39637934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 39646567 - 39646602
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||| ||||||||||||||||||||    
T  39646567 ggttttttctagattgcctttgaagaatggtgggta 39646602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 41467804 - 41467769
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  41467804 ggttttttctaaattacctttgaagaatggtgggta 41467769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 49399171 - 49399136
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||| ||||    
T  49399171 ggttttttctagattacctttgaagaatggtaggta 49399136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 6626195 - 6626161
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| ||||||||||||||||||||||||    
T  6626195 gttttttctaaattacctttgaagaatggtgggta 6626161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 21139594 - 21139560
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||| ||||||||||    
T  21139594 gttttttctagattacctttgaagtatggtgggta 21139560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 877 - 911
Target Start/End: Complemental strand, 24649896 - 24649862
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||| ||||||||    
T  24649896 aaggttttttctagattacctttgaaaaatggtgg 24649862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 33884088 - 33884122
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||| ||||||||||||||    
T  33884088 gttttttctagattacctttaaagaatggtgggta 33884122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 33960164 - 33960130
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||| ||||||||||||||    
T  33960164 gttttttctagattacctttaaagaatggtgggta 33960130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 34752485 - 34752451
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| ||||||||||||||||||||||||    
T  34752485 gttttttctaaattacctttgaagaatggtgggta 34752451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 874 - 912
Target Start/End: Complemental strand, 36030774 - 36030736
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtggg 912  Q
    |||||||||||||||| ||||||||| ||||||||||||    
T  36030774 tttaaggttttttctaaattacctttaaagaatggtggg 36030736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 46784423 - 46784457
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||| ||||||||||||    
T  46784423 gttttttctagattacctttgaggaatggtgggta 46784457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 47383914 - 47383880
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| ||||||||||||||||||||||||    
T  47383914 gttttttctatattacctttgaagaatggtgggta 47383880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 2657300 - 2657337
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| || ||||||||||||||||||||||||    
T  2657300 aaggttttttttaaattacctttgaagaatggtgggta 2657337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 10928064 - 10928101
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  10928064 aaggttttttctaaattacctttgaaaaatggtgggta 10928101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 25518815 - 25518848
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||| |||||||||||    
T  25518815 ttttttctagattacctttgaaaaatggtgggta 25518848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 28888582 - 28888615
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| |||||||||||||||||||    
T  28888582 ttttttctagattaactttgaagaatggtgggta 28888615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 878 - 911
Target Start/End: Original strand, 31844374 - 31844407
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||| |||||||||    
T  31844374 aggttttttctagattacctttgaggaatggtgg 31844407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 38790378 - 38790345
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||| ||||    
T  38790378 ttttttctagattacctttgaagaatggttggta 38790345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 875 - 904
Target Start/End: Original strand, 47187100 - 47187129
Alignment:
Q  875 ttaaggttttttctagattacctttgaaga 904  Q
    ||||||||||||||||||||||||||||||    
T  47187100 ttaaggttttttctagattacctttgaaga 47187129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 50774218 - 50774251
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||| ||||||||||||||||||||||||    
T  50774218 ttttttctaaattacctttgaagaatggtgggta 50774251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 6e-18; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 723 - 794
Target Start/End: Complemental strand, 31524786 - 31524715
Alignment:
Q  723 atgtagtttaggaattttgtagttgttgatcaagtagaacgcgaatgtagtttaggttttgaattagtgaaa 794  Q
    ||||||||||| |||||||||||| |||||||||| ||||| |||||||||||| | |||||||||||||||    
T  31524786 atgtagtttagaaattttgtagtttttgatcaagttgaacgtgaatgtagtttacggtttgaattagtgaaa 31524715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 874 - 914
Target Start/End: Original strand, 33332784 - 33332824
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33332784 tttaaggttttttctagattacctttgaagaatggtgggta 33332824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 45063541 - 45063503
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45063541 taaggttttttctagattacctttgaagaatggtgggta 45063503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 48609863 - 48609825
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48609863 taaggttttttctagattacctttgaagaatggtgggta 48609825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 22979832 - 22979795
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22979832 aaggttttttctagattacctttgaagaatggtgggta 22979795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 46913107 - 46913144
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46913107 aaggttttttctagattacctttgaagaatggtgggta 46913144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 47740516 - 47740479
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47740516 aaggttttttctagattacctttgaagaatggtgggta 47740479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 33839899 - 33839863
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  33839899 aggttttttctagattacctttgaagaatggtgggta 33839863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 45482657 - 45482693
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  45482657 aggttttttctagattacctttgaagaatggtgggta 45482693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 10028488 - 10028523
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  10028488 ggttttttctagattacctttgaagaatggtgggta 10028523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 35767481 - 35767516
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  35767481 ggttttttctagattacctttgaagaatggtgggta 35767516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 2341848 - 2341810
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  2341848 taaggttttttttagattacctttgaagaatggtgggta 2341810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 877 - 911
Target Start/End: Original strand, 19563445 - 19563479
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||||    
T  19563445 aaggttttttctagattacctttgaagaatggtgg 19563479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 877 - 911
Target Start/End: Complemental strand, 33696006 - 33695972
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||||    
T  33696006 aaggttttttctagattacctttgaagaatggtgg 33695972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 877 - 911
Target Start/End: Original strand, 42272149 - 42272183
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||||    
T  42272149 aaggttttttctagattacctttgaagaatggtgg 42272183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 20165995 - 20165962
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  20165995 ttttttctagattacctttgaagaatggtgggta 20165962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 25894102 - 25894065
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  25894102 aaggttttttctaaattacctttgaagaatggtgggta 25894065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 878 - 911
Target Start/End: Original strand, 27018115 - 27018148
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgg 911  Q
    ||||||||||||||||||||||||||||||||||    
T  27018115 aggttttttctagattacctttgaagaatggtgg 27018148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 46817595 - 46817558
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  46817595 aaggttttttctaaattacctttgaagaatggtgggta 46817558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 49171543 - 49171510
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  49171543 ttttttctagattacctttgaagaatggtgggta 49171510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 882 - 914
Target Start/End: Original strand, 15877553 - 15877585
Alignment:
Q  882 tttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||    
T  15877553 tttttctagattacctttgaagaatggtgggta 15877585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 16482956 - 16482920
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||| |||||||||||    
T  16482956 aggttttttctagattacctttgaaaaatggtgggta 16482920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 17855427 - 17855463
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||| ||||||||||||||    
T  17855427 aggttttttctagattacctttaaagaatggtgggta 17855463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 24228540 - 24228576
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24228540 aggttttttctaaattacctttgaagaatggtgggta 24228576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 879 - 911
Target Start/End: Original strand, 31586848 - 31586880
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||    
T  31586848 ggttttttctagattacctttgaagaatggtgg 31586880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 32556779 - 32556743
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||| ||||||||||||||||||||||||    
T  32556779 aggttttttctaaattacctttgaagaatggtgggta 32556743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 33411259 - 33411295
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| |||||||||||||||||||||||||    
T  33411259 aggttttttcttgattacctttgaagaatggtgggta 33411295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 33423459 - 33423423
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||| ||||||    
T  33423459 aggttttttctagattacctttgaagaatgatgggta 33423423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 33720220 - 33720184
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||| ||||||||||||||||||    
T  33720220 aggttttttctagattacttttgaagaatggtgggta 33720184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 35355887 - 35355923
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35355887 aggttttttctagattatctttgaagaatggtgggta 35355923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 36817018 - 36816982
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36817018 aggttttttctaaattacctttgaagaatggtgggta 36816982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 37846204 - 37846164
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  37846204 tttatggttttttctagattacctttaaagaatggtgggta 37846164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 879 - 911
Target Start/End: Original strand, 40670563 - 40670595
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||    
T  40670563 ggttttttctagattacctttgaagaatggtgg 40670595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 10618298 - 10618333
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10618298 ggttttttctagattacatttgaagaatggtgggta 10618333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 24923196 - 24923161
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  24923196 ggttttttctaaattacctttgaagaatggtgggta 24923161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 26579900 - 26579865
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26579900 ggttttttctaaattacctttgaagaatggtgggta 26579865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 29610635 - 29610670
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  29610635 ggttttttctaaattacctttgaagaatggtgggta 29610670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 30077108 - 30077073
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||| ||||||||||||||    
T  30077108 ggttttttctagattacctttaaagaatggtgggta 30077073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 875 - 914
Target Start/End: Original strand, 35484632 - 35484671
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  35484632 ttaaggttttttctaaattatctttgaagaatggtgggta 35484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 35752206 - 35752171
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35752206 ggttttttctaaattacctttgaagaatggtgggta 35752171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 39323616 - 39323651
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39323616 ggttttttctaaattacctttgaagaatggtgggta 39323651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 47067160 - 47067125
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||| ||||||||||||||    
T  47067160 ggttttttctagattacctttaaagaatggtgggta 47067125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 47906931 - 47906896
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  47906931 ggttttttctaaattacctttgaagaatggtgggta 47906896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 48085858 - 48085893
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  48085858 ggttttttctaaattacctttgaagaatggtgggta 48085893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 879 - 913
Target Start/End: Complemental strand, 31429658 - 31429624
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggt 913  Q
    |||||||||||||||| ||||||||||||||||||    
T  31429658 ggttttttctagattatctttgaagaatggtgggt 31429624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 44003545 - 44003507
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  44003545 taaggttttttctaaattacctttgaaaaatggtgggta 44003507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 544
Target Start/End: Complemental strand, 46521981 - 46521884
Alignment:
Q  446 atctgtttcaaaataataccataacataaactttgttctcatgtgcacgacaattgattcaaaacataaaaaacttgagttcttgacattcaaacactc 544  Q
    ||||||||| | |||||||||||| ||||||| | ||||||| | |  |||| |||||| ||||||| |||||| | |||| ||||||| |||||||||    
T  46521981 atctgtttctagataataccataatataaactgttttctcatataccagacacttgatttaaaacatcaaaaac-tcagttattgacatccaaacactc 46521884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 873 - 914
Target Start/End: Complemental strand, 498366 - 498325
Alignment:
Q  873 ctttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||| |||||||| || ||||||||||||||||||||||||    
T  498366 ctttatggttttttataaattacctttgaagaatggtgggta 498325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 5712166 - 5712203
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  5712166 aaggttttttctaaattacctttgaagaatagtgggta 5712203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 23393232 - 23393199
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||| |||||||    
T  23393232 ttttttctagattacctttgaagaatagtgggta 23393199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 910
Target Start/End: Complemental strand, 25037682 - 25037649
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtg 910  Q
    ||||||||||||| ||||||||||||||||||||    
T  25037682 aaggttttttctaaattacctttgaagaatggtg 25037649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 31625706 - 31625739
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||| |||||||||||||||    
T  31625706 ttttttctagattaccttcgaagaatggtgggta 31625739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 39866667 - 39866700
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||| ||||||||||||||||||||||||    
T  39866667 ttttttctaaattacctttgaagaatggtgggta 39866700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 878 - 911
Target Start/End: Original strand, 44659843 - 44659876
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||| |||||||||||||||||||||    
T  44659843 aggttttttctaaattacctttgaagaatggtgg 44659876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 635 - 761
Target Start/End: Complemental strand, 7493744 - 7493619
Alignment:
Q  635 gataagtgttaacttcctctcattttgtttttgttggaggttagagtttttctagtcaccgatcaagtagagattgtctatggtttg--tatgtagttta 732  Q
    |||||||||||| ||||||||||||  ||||||||| |||||||||||||  ||||   ||||||||||||  | || || ||||||   ||||||||||    
T  7493744 gataagtgttaatttcctctcatttaatttttgttgaaggttagagtttt--tagttgtcgatcaagtagaattggtttagggtttgaaaatgtagttta 7493647  T
Q  733 ggaattttgtagttgttgatcaagtagaa 761  Q
    | |||||| ||||||||||||||||||||    
T  7493646 gcaatttt-tagttgttgatcaagtagaa 7493619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 873 - 914
Target Start/End: Original strand, 24100276 - 24100317
Alignment:
Q  873 ctttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24100276 ctttaaggttttttctagattacctttgaagaatggtgggta 24100317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 32234585 - 32234545
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32234585 tttaaggttttttctagattacctttgaagaatggtgggta 32234545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 870 - 914
Target Start/End: Original strand, 47257783 - 47257827
Alignment:
Q  870 ttactttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  47257783 ttactttatggttttttctagattacctttgaagaatggtgggta 47257827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 875 - 914
Target Start/End: Original strand, 37313394 - 37313433
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37313394 ttaaggttttttctagattacctttgaagaatggtgggta 37313433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 5560218 - 5560180
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5560218 taaggttttttctagattacctttgaagaatggtgggta 5560180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 51102564 - 51102526
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51102564 taaggttttttctagattacctttgaagaatggtgggta 51102526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 29626012 - 29625975
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29626012 aaggttttttctagattacctttgaagaatggtgggta 29625975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 40131144 - 40131107
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40131144 aaggttttttctagattacctttgaagaatggtgggta 40131107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 41464349 - 41464386
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41464349 aaggttttttctagattacctttgaagaatggtgggta 41464386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 43125828 - 43125865
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43125828 aaggttttttctagattacctttgaagaatggtgggta 43125865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 22399095 - 22399131
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  22399095 aggttttttctagattacctttgaagaatggtgggta 22399131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 874 - 914
Target Start/End: Original strand, 39053388 - 39053428
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  39053388 tttatggttttttctagattacctttgaagaatggtgggta 39053428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 42291840 - 42291876
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  42291840 aggttttttctagattacctttgaagaatggtgggta 42291876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 49330035 - 49330071
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  49330035 aggttttttctagattacctttgaagaatggtgggta 49330071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 2665999 - 2666034
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  2665999 ggttttttctagattacctttgaagaatggtgggta 2666034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 7755489 - 7755454
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  7755489 ggttttttctagattacctttgaagaatggtgggta 7755454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 44806683 - 44806718
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  44806683 ggttttttctagattacctttgaagaatggtgggta 44806718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 7855300 - 7855262
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  7855300 taaggttttttctagattacttttgaagaatggtgggta 7855262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Original strand, 25353550 - 25353588
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  25353550 taaggttttttctagattacctttgaaaaatggtgggta 25353588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 27067160 - 27067126
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||    
T  27067160 gttttttctagattacctttgaagaatggtgggta 27067126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 34279896 - 34279858
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  34279896 taaggttttttctaaattacctttgaagaatggtgggta 34279858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 40804696 - 40804658
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  40804696 taagattttttctagattacctttgaagaatggtgggta 40804658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 51224212 - 51224174
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  51224212 taaggttttttctaaattacctttgaagaatggtgggta 51224174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 51452932 - 51452898
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||    
T  51452932 gttttttctagattacctttgaagaatggtgggta 51452898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 880 - 917
Target Start/End: Complemental strand, 39634753 - 39634716
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggtattt 917  Q
    |||||||||||||||| |||||||||||||||||||||    
T  39634753 gttttttctagattacttttgaagaatggtgggtattt 39634716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 48547014 - 48546977
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||| |||||||||||||||||||    
T  48547014 aaggttttttctagattatctttgaagaatggtgggta 48546977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 51415966 - 51416003
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  51415966 aaggttttttctaaattacctttgaagaatggtgggta 51416003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 52638839 - 52638876
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  52638839 aaggttttttctagattacctttaaagaatggtgggta 52638876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 874 - 911
Target Start/End: Complemental strand, 53943775 - 53943738
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgg 911  Q
    |||| |||||||||||||||||||||||||||||||||    
T  53943775 tttatggttttttctagattacctttgaagaatggtgg 53943738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 54159173 - 54159136
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  54159173 aaggttttttctagattacttttgaagaatggtgggta 54159136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 54707394 - 54707357
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  54707394 aaggttttttctaaattacctttgaagaatggtgggta 54707357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 55453429 - 55453392
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| |||||||||||||||||||||||    
T  55453429 aaggttttttctaggttacctttgaagaatggtgggta 55453392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 876 - 912
Target Start/End: Complemental strand, 2228110 - 2228074
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtggg 912  Q
    ||||||||||||||||||||||||||| |||||||||    
T  2228110 taaggttttttctagattacctttgaaaaatggtggg 2228074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 25641644 - 25641680
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||| ||||||||||||||||||||||||    
T  25641644 aggttttttctaaattacctttgaagaatggtgggta 25641680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 28048576 - 28048540
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||| ||||||||||||||||||||||||    
T  28048576 aggttttttctaaattacctttgaagaatggtgggta 28048540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 882 - 914
Target Start/End: Complemental strand, 41293498 - 41293466
Alignment:
Q  882 tttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||    
T  41293498 tttttctagattacctttgaagaatggtgggta 41293466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 43612231 - 43612195
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||| ||||||||||||||||||    
T  43612231 aggttttttctagattacatttgaagaatggtgggta 43612195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 20754576 - 20754541
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  20754576 ggttttttctaaattacctttgaagaatggtgggta 20754541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 24376572 - 24376607
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||| ||||||    
T  24376572 ggttttttctagattacctttgaagaatgatgggta 24376607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 40419834 - 40419869
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||| ||||||    
T  40419834 ggttttttctagattacctttgaagaatgatgggta 40419869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 41635972 - 41635937
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  41635972 ggttttttctaaattacctttgaagaatggtgggta 41635937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 42589829 - 42589864
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  42589829 ggttttttctaaattacctttgaagaatggtgggta 42589864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 47809780 - 47809745
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  47809780 ggttttttctaaattacctttgaagaatggtgggta 47809745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 51942588 - 51942553
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||| ||||    
T  51942588 ggttttttctagattacctttgaagaatggtaggta 51942553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 52434138 - 52434173
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||| |||||||||||    
T  52434138 ggttttttctagattacctttgaaaaatggtgggta 52434173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 52628953 - 52628988
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||| ||||||||||||||||||||||||||||||    
T  52628953 ggtttattctagattacctttgaagaatggtgggta 52628988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 53115446 - 53115481
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||| |||||||||||    
T  53115446 ggttttttctagattacctttgaaaaatggtgggta 53115481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 880 - 911
Target Start/End: Original strand, 53637841 - 53637872
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgg 911  Q
    ||||||||||||||||||||||||||||||||    
T  53637841 gttttttctagattacctttgaagaatggtgg 53637872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 55379984 - 55380019
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||| |||||||||||    
T  55379984 ggttttttctagattacctttgaaaaatggtgggta 55380019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 876 - 910
Target Start/End: Complemental strand, 21597323 - 21597289
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtg 910  Q
    ||||||||||||||||||||||||||| |||||||    
T  21597323 taaggttttttctagattacctttgaaaaatggtg 21597289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 28576287 - 28576249
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  28576287 taaggttttttctagattacctttgaagtatgatgggta 28576249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 879 - 909
Target Start/End: Original strand, 36368938 - 36368968
Alignment:
Q  879 ggttttttctagattacctttgaagaatggt 909  Q
    |||||||||||||||||||||||||||||||    
T  36368938 ggttttttctagattacctttgaagaatggt 36368968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 876 - 914
Target Start/End: Original strand, 37324537 - 37324575
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  37324537 taaggttttttctaaattacctttgaagaatggtaggta 37324575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 38156803 - 38156769
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| ||||||||||||||||||||||||    
T  38156803 gttttttctaaattacctttgaagaatggtgggta 38156769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 877 - 911
Target Start/End: Original strand, 41732525 - 41732559
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||| ||||||||    
T  41732525 aaggttttttctagattacctttgaaaaatggtgg 41732559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 877 - 911
Target Start/End: Complemental strand, 51170218 - 51170184
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||| ||||||||||||||||||||||||    
T  51170218 aaggttttttttagattacctttgaagaatggtgg 51170184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 53832666 - 53832632
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||| ||||||||||||||||||    
T  53832666 gttttttctagattacttttgaagaatggtgggta 53832632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 17665698 - 17665661
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  17665698 aaggttttttctaaattacctatgaagaatggtgggta 17665661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 30251675 - 30251638
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  30251675 aaggttttttctagactacctttgaaaaatggtgggta 30251638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 31286963 - 31286930
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||| ||||||||||||||||||||||||    
T  31286963 ttttttctaaattacctttgaagaatggtgggta 31286930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 41882161 - 41882128
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||| |||||||||||    
T  41882161 ttttttctagattacctttgaaaaatggtgggta 41882128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 43021715 - 43021748
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||| |||||||||||||||||||||||||||    
T  43021715 ttttttttagattacctttgaagaatggtgggta 43021748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 46134357 - 46134390
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||| |||||||||||    
T  46134357 ttttttctagattacctttgaaaaatggtgggta 46134390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 49130575 - 49130612
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  49130575 aaggttttttctaaattacctttgaaaaatggtgggta 49130612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 52215077 - 52215110
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||| ||||||    
T  52215077 ttttttctagattacctttgaagaatgatgggta 52215110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 869 - 914
Target Start/End: Complemental strand, 11743137 - 11743092
Alignment:
Q  869 attactttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  11743137 attactttaaggttttttctagattacccttgaagaatggtgggta 11743092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 875 - 914
Target Start/End: Complemental strand, 22551248 - 22551209
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22551248 ttaaggttttttctagattacctttgaagaatggtgggta 22551209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 1970708 - 1970745
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1970708 aaggttttttctagattacctttgaagaatggtgggta 1970745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 8615237 - 8615274
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8615237 aaggttttttctagattacctttgaagaatggtgggta 8615274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 16703363 - 16703400
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16703363 aaggttttttctagattacctttgaagaatggtgggta 16703400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 599890 - 599926
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  599890 aggttttttctagattacctttgaagaatggtgggta 599926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 19415717 - 19415681
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  19415717 aggttttttctagattacctttgaagaatggtgggta 19415681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 28947085 - 28947121
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  28947085 aggttttttctagattacctttgaagaatggtgggta 28947121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 5882505 - 5882540
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  5882505 ggttttttctagattacctttgaagaatggtgggta 5882540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 19281238 - 19281203
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  19281238 ggttttttctagattacctttgaagaatggtgggta 19281203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 30467786 - 30467751
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  30467786 ggttttttctagattacctttgaagaatggtgggta 30467751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 960086 - 960052
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||    
T  960086 gttttttctagattacctttgaagaatggtgggta 960052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 878 - 911
Target Start/End: Original strand, 929657 - 929690
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgg 911  Q
    ||||||||||||||||||||||||||||||||||    
T  929657 aggttttttctagattacctttgaagaatggtgg 929690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 2892189 - 2892222
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  2892189 ttttttctagattacctttgaagaatggtgggta 2892222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 13329378 - 13329415
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  13329378 aaggttttttctaaattacctttgaagaatggtgggta 13329415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 28949019 - 28948982
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  28949019 aaggttttttctaaattacctttgaagaatggtgggta 28948982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 30743629 - 30743596
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  30743629 ttttttctagattacctttgaagaatggtgggta 30743596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 7167580 - 7167616
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||| |||||||||||    
T  7167580 aggttttttctagattacctttgaaaaatggtgggta 7167616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 14891563 - 14891527
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||| ||||||||||||||||||||    
T  14891563 aggttttttctagattgcctttgaagaatggtgggta 14891527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 879 - 911
Target Start/End: Original strand, 24168090 - 24168122
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||    
T  24168090 ggttttttctagattacctttgaagaatggtgg 24168122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 7345295 - 7345260
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||| |||||||    
T  7345295 ggttttttctagattacctttgaagaatagtgggta 7345260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 10508091 - 10508056
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||| |||||||||||||||||||    
T  10508091 ggttttttctagattatctttgaagaatggtgggta 10508056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 883 - 914
Target Start/End: Complemental strand, 18101674 - 18101643
Alignment:
Q  883 ttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||    
T  18101674 ttttctagattacctttgaagaatggtgggta 18101643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 3291009 - 3291042
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||| ||||||||||||||||||||||||    
T  3291009 ttttttctaaattacctttgaagaatggtgggta 3291042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 910
Target Start/End: Complemental strand, 7393771 - 7393738
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtg 910  Q
    ||||||||||||||||||||||| ||||||||||    
T  7393771 aaggttttttctagattacctttaaagaatggtg 7393738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 33452753 - 33452720
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| |||||||||||||||||||    
T  33452753 ttttttctagattatctttgaagaatggtgggta 33452720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 870 - 914
Target Start/End: Original strand, 25831511 - 25831555
Alignment:
Q  870 ttactttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  25831511 ttactataaggttttttctagattacctttgaagaatggtgggta 25831555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 876 - 914
Target Start/End: Original strand, 24253378 - 24253416
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24253378 taaggttttttctagattacctttgaagaatggtgggta 24253416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 43326564 - 43326527
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43326564 aaggttttttctagattacctttgaagaatggtgggta 43326527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 3466865 - 3466829
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  3466865 aggttttttctagattacctttgaagaatggtgggta 3466829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 5137713 - 5137749
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  5137713 aggttttttctagattacctttgaagaatggtgggta 5137749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 875 - 911
Target Start/End: Complemental strand, 12558205 - 12558169
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||||||    
T  12558205 ttaaggttttttctagattacctttgaagaatggtgg 12558169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 40886215 - 40886175
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  40886215 tttatggttttttctagattacctttgaagaatggtgggta 40886175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 43262371 - 43262331
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  43262371 tttaaggttttttctatattacctttgaagaatggtgggta 43262331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 5184971 - 5185006
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  5184971 ggttttttctagattacctttgaagaatggtgggta 5185006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 910
Target Start/End: Complemental strand, 739889 - 739856
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtg 910  Q
    ||||||||||||||||||||||||||||||||||    
T  739889 aaggttttttctagattacctttgaagaatggtg 739856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 4149691 - 4149728
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  4149691 aaggttttttctatattacctttgaagaatggtgggta 4149728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 6901796 - 6901833
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||| |||||||||||||||||||    
T  6901796 aaggttttttctagattatctttgaagaatggtgggta 6901833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 15398663 - 15398630
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  15398663 ttttttctagattacctttgaagaatggtgggta 15398630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 18479849 - 18479816
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  18479849 ttttttctagattacctttgaagaatggtgggta 18479816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 27503376 - 27503413
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  27503376 aaggttttttctaaattacctttgaagaatggtgggta 27503413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 36472458 - 36472421
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||| |||||||||||    
T  36472458 aaggttttttctagattacctttgaaaaatggtgggta 36472421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 869 - 914
Target Start/End: Original strand, 40110223 - 40110268
Alignment:
Q  869 attactttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||    
T  40110223 attaatttaaggttttttctatattacatttgaagaatggtgggta 40110268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 875 - 911
Target Start/End: Original strand, 890901 - 890937
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgg 911  Q
    ||||||||||||||||||||| |||||||||||||||    
T  890901 ttaaggttttttctagattacttttgaagaatggtgg 890937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 1402678 - 1402642
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||| |||||||||||    
T  1402678 aggttttttctagattacctttgaaaaatggtgggta 1402642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 7722047 - 7722083
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||| ||||||||||||||||||||    
T  7722047 aggttttttctagattgcctttgaagaatggtgggta 7722083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 13957668 - 13957704
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||| ||||||||||||||||||||||||    
T  13957668 aggttttttctaaattacctttgaagaatggtgggta 13957704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 875 - 911
Target Start/End: Complemental strand, 27501242 - 27501206
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||| ||||||||||||||||||||||||    
T  27501242 ttaaggttttttttagattacctttgaagaatggtgg 27501206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 38638083 - 38638047
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||| |||||||||||    
T  38638083 aggttttttctagattacctttgaaaaatggtgggta 38638047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 42247955 - 42247919
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||| ||||||||||||||||||||||||    
T  42247955 aggttttttctaaattacctttgaagaatggtgggta 42247919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 2585461 - 2585496
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||| |||||||||||    
T  2585461 ggttttttctagattacctttgaaaaatggtgggta 2585496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 9424764 - 9424729
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9424764 ggttttttctaaattacctttgaagaatggtgggta 9424729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 24167956 - 24167921
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||| |||||||||||    
T  24167956 ggttttttctagattacctttgaaaaatggtgggta 24167921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 910
Target Start/End: Complemental strand, 27278660 - 27278629
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtg 910  Q
    ||||||||||||||||||||||||||||||||    
T  27278660 ggttttttctagattacctttgaagaatggtg 27278629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 35626037 - 35626072
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35626037 ggttttttctaaattacctttgaagaatggtgggta 35626072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 36365617 - 36365582
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  36365617 ggttttttctaaattacctttgaagaatggtgggta 36365582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 39932578 - 39932613
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||| |||||||||||||||||||||||||||    
T  39932578 ggttttttttagattacctttgaagaatggtgggta 39932613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 40632498 - 40632533
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||| |||||||||||    
T  40632498 ggttttttctagattacctttgaaaaatggtgggta 40632533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 6973063 - 6973097
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| ||||||||||||||||||||||||    
T  6973063 gttttttctaaattacctttgaagaatggtgggta 6973097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 876 - 914
Target Start/End: Original strand, 19295726 - 19295764
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  19295726 taaggttttttctaaattacctttgaaaaatggtgggta 19295764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 9527190 - 9527157
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||| |||||||||||||||||||||||||||    
T  9527190 ttttttttagattacctttgaagaatggtgggta 9527157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 27938894 - 27938931
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  27938894 aaggttttttctagattatttttgaagaatggtgggta 27938931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 38015684 - 38015651
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||| ||||||||||||||||||||||||    
T  38015684 ttttttctaaattacctttgaagaatggtgggta 38015651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 42658836 - 42658799
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  42658836 aaggttttttcaaaattacctttgaagaatggtgggta 42658799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 41632194 - 41632154
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41632194 tttaaggttttttctagattacctttgaagaatggtgggta 41632154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 874 - 914
Target Start/End: Original strand, 51363001 - 51363041
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  51363001 tttaaggttttttctagattacctttgaagaatggtgggta 51363041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 29478357 - 29478394
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29478357 aaggttttttctagattacctttgaagaatggtgggta 29478394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 873 - 914
Target Start/End: Complemental strand, 37239268 - 37239227
Alignment:
Q  873 ctttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  37239268 ctttaaggttttttctaaattacctttgaagaatggtgggta 37239227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 41702644 - 41702607
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41702644 aaggttttttctagattacctttgaagaatggtgggta 41702607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 47344653 - 47344690
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47344653 aaggttttttctagattacctttgaagaatggtgggta 47344690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 873 - 914
Target Start/End: Original strand, 48313550 - 48313591
Alignment:
Q  873 ctttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  48313550 ctttagggttttttctagattacctttgaagaatggtgggta 48313591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 54805803 - 54805766
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  54805803 aaggttttttctagattacctttgaagaatggtgggta 54805766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 11972306 - 11972266
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  11972306 tttaaggttttttctaaattacctttgaagaatggtgggta 11972266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 14017558 - 14017522
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  14017558 aggttttttctagattacctttgaagaatggtgggta 14017522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 17555670 - 17555634
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  17555670 aggttttttctagattacctttgaagaatggtgggta 17555634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 23437590 - 23437626
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  23437590 aggttttttctagattacctttgaagaatggtgggta 23437626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 39077543 - 39077579
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  39077543 aggttttttctagattacctttgaagaatggtgggta 39077579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 49881247 - 49881211
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  49881247 aggttttttctagattacctttgaagaatggtgggta 49881211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 2243457 - 2243492
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  2243457 ggttttttctagattacctttgaagaatggtgggta 2243492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 29777440 - 29777405
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  29777440 ggttttttctagattacctttgaagaatggtgggta 29777405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 31070256 - 31070221
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  31070256 ggttttttctagattacctttgaagaatggtgggta 31070221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 41949381 - 41949416
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  41949381 ggttttttctagattacctttgaagaatggtgggta 41949416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 43471878 - 43471843
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  43471878 ggttttttctagattacctttgaagaatggtgggta 43471843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 50457993 - 50457958
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  50457993 ggttttttctagattacctttgaagaatggtgggta 50457958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 53854612 - 53854577
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  53854612 ggttttttctagattacctttgaagaatggtgggta 53854577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 55056442 - 55056407
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  55056442 ggttttttctagattacctttgaagaatggtgggta 55056407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 146611 - 146577
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||    
T  146611 gttttttctagattacctttgaagaatggtgggta 146577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 18462195 - 18462161
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||    
T  18462195 gttttttctagattacctttgaagaatggtgggta 18462161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 31532321 - 31532283
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  31532321 taaggttttttctagattacctttgaagaatgatgggta 31532283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 869 - 911
Target Start/End: Complemental strand, 47662295 - 47662253
Alignment:
Q  869 attactttaaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  47662295 attactataaggttttttctagattacctttgaataatggtgg 47662253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 877 - 911
Target Start/End: Original strand, 50233997 - 50234031
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||||    
T  50233997 aaggttttttctagattacctttgaagaatggtgg 50234031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 2826866 - 2826829
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  2826866 aaggttttttctagattccctttgaagaatggtgggta 2826829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 910
Target Start/End: Original strand, 3170623 - 3170656
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtg 910  Q
    ||||||||||||||||||||||||||||||||||    
T  3170623 aaggttttttctagattacctttgaagaatggtg 3170656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 6019929 - 6019962
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  6019929 ttttttctagattacctttgaagaatggtgggta 6019962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 21366794 - 21366757
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| |||||||||||||||||||||||||||||||||    
T  21366794 aagggtttttctagattacctttgaagaatggtgggta 21366757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 22468951 - 22468918
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  22468951 ttttttctagattacctttgaagaatggtgggta 22468918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 22618693 - 22618660
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  22618693 ttttttctagattacctttgaagaatggtgggta 22618660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 34835174 - 34835211
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||| |||||||||||    
T  34835174 aaggttttttctagattacctttgaaaaatggtgggta 34835211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 42033172 - 42033209
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| |||||||||||||||||||||||||||    
T  42033172 aaggttttttttagattacctttgaagaatggtgggta 42033209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 42085204 - 42085241
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  42085204 aaggttttttctagattacctttaaagaatggtgggta 42085241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 42222292 - 42222325
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  42222292 ttttttctagattacctttgaagaatggtgggta 42222325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 42557583 - 42557616
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  42557583 ttttttctagattacctttgaagaatggtgggta 42557616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 237475 - 237511
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||| ||||||||||||||    
T  237475 aggttttttctagattacctttaaagaatggtgggta 237511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 874 - 914
Target Start/End: Original strand, 9798459 - 9798499
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  9798459 tttatggttttttttagattacctttgaagaatggtgggta 9798499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 15060466 - 15060426
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  15060466 tttatggttttttctaaattacctttgaagaatggtgggta 15060426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 32366844 - 32366808
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||| |||||||||||||||||||    
T  32366844 aggttttttctagattatctttgaagaatggtgggta 32366808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 879 - 911
Target Start/End: Complemental strand, 42766024 - 42765992
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||    
T  42766024 ggttttttctagattacctttgaagaatggtgg 42765992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 874 - 914
Target Start/End: Complemental strand, 50536812 - 50536772
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  50536812 tttaaggttttttttagattacctttgaagaatagtgggta 50536772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 875 - 911
Target Start/End: Original strand, 54216308 - 54216344
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgg 911  Q
    ||||||||||||||| |||||||||||||||||||||    
T  54216308 ttaaggttttttctaaattacctttgaagaatggtgg 54216344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 397401 - 397436
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||| |||||||||||||||||||||||||||    
T  397401 ggttttttttagattacctttgaagaatggtgggta 397436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 910
Target Start/End: Original strand, 407753 - 407784
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtg 910  Q
    ||||||||||||||||||||||||||||||||    
T  407753 ggttttttctagattacctttgaagaatggtg 407784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 1662431 - 1662396
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||| |||||||||||    
T  1662431 ggttttttctagattacctttgaaaaatggtgggta 1662396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 875 - 914
Target Start/End: Complemental strand, 3293199 - 3293160
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  3293199 ttaaggttttttctaaattacctttgaaaaatggtgggta 3293160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 3692393 - 3692358
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||| |||||||||||    
T  3692393 ggttttttctagattacctttgaataatggtgggta 3692358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 27373075 - 27373110
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||| ||||||||||||||    
T  27373075 ggttttttctagattacctttaaagaatggtgggta 27373110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 27873720 - 27873685
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27873720 ggttttttctaaattacctttgaagaatggtgggta 27873685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 875 - 914
Target Start/End: Complemental strand, 33897681 - 33897643
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  33897681 ttaaggtttttt-tagattacctttgaagaatggtgggta 33897643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 34552318 - 34552353
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  34552318 ggttttttctaaattacctttgaagaatggtgggta 34552353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 38591667 - 38591702
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||| ||||||||||||||||||    
T  38591667 ggttttttctagattacatttgaagaatggtgggta 38591702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 39587962 - 39587927
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||| ||||||    
T  39587962 ggttttttctagattacctttgaagaatgatgggta 39587927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 54607961 - 54607996
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||| ||||||||||||||||||    
T  54607961 ggttttttctagattacttttgaagaatggtgggta 54607996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 56023181 - 56023146
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||| |||||||    
T  56023181 ggttttttctagattacctttgaagaatagtgggta 56023146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 5117609 - 5117575
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| ||||||||||||||||||||||||    
T  5117609 gttttttctaaattacctttgaagaatggtgggta 5117575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 6285307 - 6285341
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| ||||||||||||||||||||||||    
T  6285307 gttttttctatattacctttgaagaatggtgggta 6285341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 34276547 - 34276581
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| ||||||||||||||||||||||||    
T  34276547 gttttttctaaattacctttgaagaatggtgggta 34276581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 35446506 - 35446540
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||| ||||||||||||||    
T  35446506 gttttttctagattaccttttaagaatggtgggta 35446540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 20352012 - 20351979
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||| ||||||||||||||||||||||||    
T  20352012 ttttttctaaattacctttgaagaatggtgggta 20351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 873 - 914
Target Start/End: Complemental strand, 26091447 - 26091406
Alignment:
Q  873 ctttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||| |||| ||| |||||||||||||||    
T  26091447 ctttaaggttttttctaaattatcttggaagaatggtgggta 26091406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 27580120 - 27580153
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||| |||||||||||    
T  27580120 ttttttctagattacctttgaaaaatggtgggta 27580153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 45633953 - 45633916
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| || ||||||||||||||||||||||||    
T  45633953 aaggttttttttaaattacctttgaagaatggtgggta 45633916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 48259691 - 48259658
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||| |||||||||||||||||    
T  48259691 ttttttctagattacccttgaagaatggtgggta 48259658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 50534632 - 50534665
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||| |||||||||||||||||||||||||||    
T  50534632 ttttttttagattacctttgaagaatggtgggta 50534665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 53462001 - 53461964
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  53462001 aaggttttttctaaattacctatgaagaatggtgggta 53461964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 53834235 - 53834202
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||| ||||||||||||||||||    
T  53834235 ttttttctagattacttttgaagaatggtgggta 53834202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 54575125 - 54575088
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  54575125 aaggttttttctagattatcttagaagaatggtgggta 54575088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 866 - 914
Target Start/End: Original strand, 4034577 - 4034625
Alignment:
Q  866 atgattactttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  4034577 atgattacattatggttttttctagattacctttgaagaatggtgggta 4034625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 875 - 914
Target Start/End: Original strand, 12814608 - 12814647
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12814608 ttaaggttttttctagattacctttgaagaatggtgggta 12814647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 876 - 914
Target Start/End: Original strand, 26710340 - 26710378
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26710340 taaggttttttctagattacctttgaagaatggtgggta 26710378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 876 - 914
Target Start/End: Original strand, 40735459 - 40735497
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40735459 taaggttttttctagattacctttgaagaatggtgggta 40735497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 6594643 - 6594606
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6594643 aaggttttttctagattacctttgaagaatggtgggta 6594606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 27400399 - 27400436
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27400399 aaggttttttctagattacctttgaagaatggtgggta 27400436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 32608376 - 32608413
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32608376 aaggttttttctagattacctttgaagaatggtgggta 32608413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Original strand, 10424592 - 10424628
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  10424592 aggttttttctagattacctttgaagaatggtgggta 10424628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 13815402 - 13815366
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  13815402 aggttttttctagattacctttgaagaatggtgggta 13815366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 874 - 914
Target Start/End: Original strand, 15925073 - 15925113
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  15925073 tttaaggttttttctagattacctttcaagaatggtgggta 15925113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 28020005 - 28019969
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||||    
T  28020005 aggttttttctagattacctttgaagaatggtgggta 28019969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 746464 - 746499
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  746464 ggttttttctagattacctttgaagaatggtgggta 746499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 2325072 - 2325037
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  2325072 ggttttttctagattacctttgaagaatggtgggta 2325037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 27024413 - 27024448
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  27024413 ggttttttctagattacctttgaagaatggtgggta 27024448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 27651217 - 27651182
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  27651217 ggttttttctagattacctttgaagaatggtgggta 27651182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 637 - 761
Target Start/End: Complemental strand, 35494462 - 35494343
Alignment:
Q  637 taagtgttaacttcctctcattttgtttttgttggaggttagagtttttctagtcaccgatcaagtagagattgtctatggtttgtatgtagtttaggaa 736  Q
    ||||||||||||| ||||||||| | |||||    ||||||||||||||  |||    ||| ||||| | ||||| || |||||| |||||||||| |||    
T  35494462 taagtgttaactttctctcatttagattttga---aggttagagttttt--agttgttgattaagtataaattgtatagggtttgaatgtagtttatgaa 35494368  T
Q  737 ttttgtagttgttgatcaagtagaa 761  Q
    |||| ||||||||||||||||||||    
T  35494367 ttttttagttgttgatcaagtagaa 35494343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 876 - 914
Target Start/End: Complemental strand, 2000512 - 2000474
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  2000512 taaggttttttctaaattacctttgaagaatggtgggta 2000474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 7892870 - 7892836
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||    
T  7892870 gttttttctagattacctttgaagaatggtgggta 7892836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 868 - 914
Target Start/End: Original strand, 34518354 - 34518400
Alignment:
Q  868 gattactttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||||    
T  34518354 gattacttttatgttttttttagattacctttgaagaatggtgggta 34518400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 38997100 - 38997134
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||||||||||    
T  38997100 gttttttctagattacctttgaagaatggtgggta 38997134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 2688903 - 2688866
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2688903 aaggttttttctaaattacctttgaagaatggtgggta 2688866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 12333669 - 12333632
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  12333669 aaggttttttctaaattacctttgaagaatggtgggta 12333632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 17600832 - 17600869
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||| |||||||||||    
T  17600832 aaggttttttctagattacctttgaaaaatggtgggta 17600869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 23901775 - 23901812
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| |||||||||||||||||||||||||||||||||    
T  23901775 aagggtttttctagattacctttgaagaatggtgggta 23901812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 32327361 - 32327394
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  32327361 ttttttctagattacctttgaagaatggtgggta 32327394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 874 - 914
Target Start/End: Original strand, 1229628 - 1229668
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  1229628 tttaaggttttttctagattacctttaaagaatggtaggta 1229668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 878 - 914
Target Start/End: Complemental strand, 37621054 - 37621018
Alignment:
Q  878 aggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||| |||||||||||||||||||||||||||    
T  37621054 aggttttttttagattacctttgaagaatggtgggta 37621018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 879 - 911
Target Start/End: Original strand, 45370988 - 45371020
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||    
T  45370988 ggttttttctagattacctttgaagaatggtgg 45371020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 6430471 - 6430506
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||| |||||||||||||||    
T  6430471 ggttttttctagattaccttcgaagaatggtgggta 6430506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 10244765 - 10244730
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||| |||||||||||||||||||||||||||    
T  10244765 ggttttttttagattacctttgaagaatggtgggta 10244730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 11184970 - 11185005
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||| ||||    
T  11184970 ggttttttctagattacctttgaagaatggtaggta 11185005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 28641464 - 28641429
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  28641464 ggttttttctaaattacctttgaagaatggtgggta 28641429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 40037141 - 40037176
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||| |||||||    
T  40037141 ggttttttctagattacctttgaagaatagtgggta 40037176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 40635216 - 40635251
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  40635216 ggttttttctaaattacctttgaagaatggtgggta 40635251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 43356097 - 43356132
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||| ||||||||||||||||||||||||    
T  43356097 ggttttttctaaattacctttgaagaatggtgggta 43356132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 44481826 - 44481861
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||| |||||||||||    
T  44481826 ggttttttctagattacctttgaaaaatggtgggta 44481861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 145281 - 145315
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| ||||||||||||||||||||||||    
T  145281 gttttttctaaattacctttgaagaatggtgggta 145315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 910
Target Start/End: Original strand, 5726128 - 5726158
Alignment:
Q  880 gttttttctagattacctttgaagaatggtg 910  Q
    |||||||||||||||||||||||||||||||    
T  5726128 gttttttctagattacctttgaagaatggtg 5726158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 877 - 911
Target Start/End: Complemental strand, 8433101 - 8433067
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||| ||||||||||||||||    
T  8433101 aaggttttttctagattatctttgaagaatggtgg 8433067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 10176558 - 10176592
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||| ||||||||||||||    
T  10176558 gttttttctagattacctttaaagaatggtgggta 10176592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 14660445 - 14660479
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| ||||||||||||||||||||    
T  14660445 gttttttctagattgcctttgaagaatggtgggta 14660479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 32948445 - 32948479
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||| ||||||||||||||    
T  32948445 gttttttctagattacctttaaagaatggtgggta 32948479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 878 - 908
Target Start/End: Complemental strand, 37255516 - 37255486
Alignment:
Q  878 aggttttttctagattacctttgaagaatgg 908  Q
    |||||||||||||||||||||||||||||||    
T  37255516 aggttttttctagattacctttgaagaatgg 37255486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 876 - 914
Target Start/End: Original strand, 39103042 - 39103080
Alignment:
Q  876 taaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  39103042 taaggttttttctaaattacctttgaaaaatggtgggta 39103080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 877 - 911
Target Start/End: Complemental strand, 40544250 - 40544216
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgg 911  Q
    ||||||||||||| |||||||||||||||||||||    
T  40544250 aaggttttttctaaattacctttgaagaatggtgg 40544216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 4609626 - 4609659
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||| |||||||||||||||||||||||||||    
T  4609626 ttttttttagattacctttgaagaatggtgggta 4609659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 9444683 - 9444716
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||| ||||||||||||||||||    
T  9444683 ttttttctagattacatttgaagaatggtgggta 9444716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 12842103 - 12842136
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||| |||||||||||||||||||||||||    
T  12842103 ttttttcttgattacctttgaagaatggtgggta 12842136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 27331298 - 27331331
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||| ||||||||||||||||||||||||    
T  27331298 ttttttctaaattacctttgaagaatggtgggta 27331331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 33427828 - 33427795
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||| |||||||||||    
T  33427828 ttttttctagattacctttgaataatggtgggta 33427795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 35158220 - 35158187
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||| ||||||||||||||||||||||||    
T  35158220 ttttttctaaattacctttgaagaatggtgggta 35158187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 881 - 914
Target Start/End: Complemental strand, 39301367 - 39301334
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||| ||||||||||||||||||||||||    
T  39301367 ttttttctaaattacctttgaagaatggtgggta 39301334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2003 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 875 - 914
Target Start/End: Original strand, 97 - 136
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  97 ttaaggttttttctagattacctttgaaaaatggtgggta 136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 2615 - 2580
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  2615 ggttttttctagattacctttgaagaatggtgggta 2580  T

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Target: scaffold0100 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 32560 - 32595
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  32560 ggttttttctagattacctttgaagaatggtgggta 32595  T

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Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 39739 - 39704
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  39739 ggttttttctagattacctttgaagaatggtgggta 39704  T

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Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 75427 - 75392
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||||    
T  75427 ggttttttctagattacctttgaagaatggtgggta 75392  T

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Target: scaffold0394 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 881 - 914
Target Start/End: Original strand, 3089 - 3122
Alignment:
Q  881 ttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||||||||||||||    
T  3089 ttttttctagattacctttgaagaatggtgggta 3122  T

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Target: scaffold0721 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 874 - 914
Target Start/End: Original strand, 7084 - 7124
Alignment:
Q  874 tttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  7084 tttatggttttttctaaattacctttgaagaatggtgggta 7124  T

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Target: scaffold0076 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 879 - 911
Target Start/End: Complemental strand, 13945 - 13913
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgg 911  Q
    |||||||||||||||||||||||||||||||||    
T  13945 ggttttttctagattacctttgaagaatggtgg 13913  T

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Target: scaffold0198 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Complemental strand, 19037 - 19002
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||||||||| |||||||||||||||||||    
T  19037 ggttttttctagattatctttgaagaatggtgggta 19002  T

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Target: scaffold0150 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 875 - 914
Target Start/End: Original strand, 14739 - 14778
Alignment:
Q  875 ttaaggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  14739 ttaaggttttgtctagattacctttgaaaaatggtgggta 14778  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 879 - 914
Target Start/End: Original strand, 278005 - 278040
Alignment:
Q  879 ggttttttctagattacctttgaagaatggtgggta 914  Q
    |||||||| |||||||||||||||||||||||||||    
T  278005 ggttttttttagattacctttgaagaatggtgggta 278040  T

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Target: scaffold0125 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 20648 - 20614
Alignment:
Q  880 gttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||| |||||||||||    
T  20648 gttttttctagattacctttgaaaaatggtgggta 20614  T

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Target: scaffold0684 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Complemental strand, 4729 - 4692
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||| || |||||||||||    
T  4729 aaggttttttctagattacctttcaaaaatggtgggta 4692  T

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Target: scaffold0163 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 877 - 914
Target Start/End: Original strand, 3389 - 3426
Alignment:
Q  877 aaggttttttctagattacctttgaagaatggtgggta 914  Q
    ||||||||||||||||||||||| || |||||||||||    
T  3389 aaggttttttctagattacctttcaaaaatggtgggta 3426  T

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