View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3030_high_37 (Length: 251)
Name: NF3030_high_37
Description: NF3030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3030_high_37 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 10 - 235
Target Start/End: Complemental strand, 48466797 - 48466572
Alignment:
| Q |
10 |
agatgaatgtagaactttatgtatagtcttcattttgaaaacactcatgttgaattccatagacggaaaataaaaatggttgatatacaagctcacaata |
109 |
Q |
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| T |
48466797 |
agatgaatgtagaactttatgtatagtctttattttgaaaacactcatgttgaattccatagacggaaaataaatatggttgatatacaagctcacaata |
48466698 |
T |
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| Q |
110 |
ctatacaagctaaaaggtgcaagttattttcttcttttggtaacttgtatctgttttgatttttgctacttttggtaaactgtaattctgatttctgaat |
209 |
Q |
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| T |
48466697 |
ctatacaagataaaaggtgcaagttattttcttcttttggtaacttgtatttgttttgatttttgctacttttggtaaactgtaattctgatttctgaat |
48466598 |
T |
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| Q |
210 |
ccatatagcgtgaatcagaagttttt |
235 |
Q |
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| T |
48466597 |
ccatatagtgtgaatcagaagttttt |
48466572 |
T |
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