View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3032_low_20 (Length: 313)

Name: NF3032_low_20
Description: NF3032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3032_low_20
NF3032_low_20
[»] chr2 (5 HSPs)
chr2 (58-303)||(9208569-9208820)
chr2 (58-134)||(4453777-4453852)
chr2 (49-96)||(997810-997857)
chr2 (54-101)||(7161811-7161858)
chr2 (47-96)||(3625167-3625218)
[»] chr3 (4 HSPs)
chr3 (59-303)||(46233767-46234017)
chr3 (49-303)||(11394008-11394268)
chr3 (54-134)||(19766009-19766088)
chr3 (53-134)||(52130783-52130864)
[»] chr1 (6 HSPs)
chr1 (58-303)||(32440453-32440704)
chr1 (48-134)||(17726022-17726107)
chr1 (58-101)||(22368211-22368254)
chr1 (59-103)||(31771384-31771428)
chr1 (59-96)||(1721556-1721593)
chr1 (59-103)||(7608396-7608440)
[»] chr7 (3 HSPs)
chr7 (54-303)||(16262486-16262741)
chr7 (59-134)||(21820154-21820228)
chr7 (64-134)||(44546023-44546092)
[»] chr4 (5 HSPs)
chr4 (47-134)||(32651249-32651336)
chr4 (51-101)||(41810163-41810213)
chr4 (61-134)||(3649873-3649945)
chr4 (49-101)||(38467723-38467775)
chr4 (59-93)||(26720237-26720271)
[»] chr6 (3 HSPs)
chr6 (49-134)||(31444761-31444845)
chr6 (53-134)||(33054143-33054223)
chr6 (54-93)||(27444122-27444161)
[»] chr8 (2 HSPs)
chr8 (59-134)||(44663663-44663737)
chr8 (59-101)||(35348991-35349033)
[»] scaffold0152 (1 HSPs)
scaffold0152 (59-106)||(10195-10242)
[»] scaffold0014 (1 HSPs)
scaffold0014 (52-93)||(32608-32649)
[»] scaffold0003 (2 HSPs)
scaffold0003 (59-106)||(37015-37062)
scaffold0003 (54-93)||(43200-43239)


Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 58 - 303
Target Start/End: Original strand, 9208569 - 9208820
Alignment:
Q  58 aatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaactaattatggccattggattgat 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  9208569 aatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaatcctaaagttttaggcgccaactaattatggcccttggattgat 9208668  T
Q  158 ccagccctttatatcaagctttgtgaaacgcgtgcatagttccaacgtttgcattg----ttccaatgcttcggttaccaatggaatgc--atagtaaaa 251  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    ||||||||||| ||||||||||| |||||  |||||||||    
T  9208669 ccagccctttatatcaaactttgtgaaacgcgtgcatagttccaatgtttgcattgttaattccaatgctttggttaccaatgtaatgcatatagtaaaa 9208768  T
Q  252 caacaacctctccaacccaccctcttcatcgtctatttctctcctccctctc 303  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  9208769 caacaacctctccaacccaccctcttcatcgtcgctttctctcctccctctc 9208820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 4453777 - 4453852
Alignment:
Q  58 aatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaa 134  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||  |||  ||||||||||||||    
T  4453777 aatctaacttattcctaatcctagttaacactccaattaccact-taaaaccctaattctatgattttaggcgccaa 4453852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 997810 - 997857
Alignment:
Q  49 atctaatctaatctaacttattcctaatcctagttaacactccaatta 96  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  997810 atctaatctaatctaacttattcctaatcctagttaacacttcaatta 997857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 7161811 - 7161858
Alignment:
Q  54 atctaatctaacttattcctaatcctagttaacactccaattatcact 101  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7161811 atctaatctaacttatttctaatcctagttaacactccaattatcact 7161858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 3625167 - 3625218
Alignment:
Q  47 tcatctaatctaa--tctaacttattcctaatcctagttaacactccaatta 96  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  3625167 tcatctaatctaacttctaacttattcctaatcctaattaacactccaatta 3625218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 59 - 303
Target Start/End: Complemental strand, 46234017 - 46233767
Alignment:
Q  59 atctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaactaattatggccattggattgatc 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  46234017 atctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaatcctaaagttttaggcgccaactaattatggcccttggattgatc 46233918  T
Q  159 cagccctttatatcaagctttgtgaaacgcgtgcatagttccaacgtttgcattg----ttccaatgcttcggttaccaatggaatgc--atagtaaaac 252  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    ||||||||||| ||||||||||| |||||  ||||||||||    
T  46233917 cagccctttatatcaaactttgtgaaacgcgtgcatagttccaatgtttgcattgttaattccaatgctttggttaccaatgtaatgcatatagtaaaac 46233818  T
Q  253 aacaacctctccaacccaccctcttcatcgtctatttctctcctccctctc 303  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  46233817 aacaacctctccaacccaccctcttcatcgtcgctttctctcctccctctc 46233767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 49 - 303
Target Start/End: Original strand, 11394008 - 11394268
Alignment:
Q  49 atctaatctaatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaactaattatggccat 148  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |    
T  11394008 atctaatctaatctaacttatttctaatcctagttaacactccaattatcactccaaaaccctaatcctaaagttttaggcgccaactaattatggccct 11394107  T
Q  149 tggattgatccagccctttatatcaagctttgtgaaacgcgtgcatagttccaacgtttgcattg----ttccaatgcttcggttaccaatggaatgc-- 242  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||    |||||||| || ||||||||||| |||||      
T  11394108 tggattgatccagccctttatatcaaactttgtgaaaagcgtgcatagttccaatgtttgcattgttaattccaatgttttggttaccaatgtaatgcat 11394207  T
Q  243 atagtaaaacaacaacctctccaacccaccctcttcatcgtctatttctctcctccctctc 303  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  11394208 atagtaaaacaacaacctctccaacccaccctcttcatcgtcgctttctctcctccctctc 11394268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 19766009 - 19766088
Alignment:
Q  54 atctaatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaa 134  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||| ||||   |||||||||||||    
T  19766009 atctaatctaacttatttctaatcctagttaacactccaattaacactcc-aaaccctaatcctacttttttaggcgccaa 19766088  T

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Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 52130783 - 52130864
Alignment:
Q  53 aatctaatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaa-aattttaggcgccaa 134  Q
    |||||| ||||||||||| |||||||||| |||||||||||||| ||||  ||||||||||  |||| | |||||||||||||    
T  52130783 aatctagtctaacttatttctaatcctaggtaacactccaattaccact-taaaaccctaattctaagatttttaggcgccaa 52130864  T

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Target: chr1 (Bit Score: 176; Significance: 8e-95; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 58 - 303
Target Start/End: Complemental strand, 32440704 - 32440453
Alignment:
Q  58 aatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaactaattatggccattggattgat 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  32440704 aatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaatcctaaagttttaggcgccaactaattatggcccttggattgat 32440605  T
Q  158 ccagccctttatatcaagctttgtgaaacgcgtgcatagttccaacgtttgcattg----ttccaatgcttcggttaccaatggaatgc--atagtaaaa 251  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||| ||||||||||    ||||||||||| ||||||||||| |||||  |||||||||    
T  32440604 ccagccctttatatcaaactttgtgaaacgtgtgcatagtttcaatgtttgcattgttaattccaatgctttggttaccaatgtaatgcatatagtaaaa 32440505  T
Q  252 caacaacctctccaacccaccctcttcatcgtctatttctctcctccctctc 303  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  32440504 caacaacctctccgacccaccctcttcatcgtcgctttctctcctccctctc 32440453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 17726022 - 17726107
Alignment:
Q  48 catctaatctaatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaa-aattttaggcgccaa 134  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||  |||| | |||||||||||||    
T  17726022 catctaatctaatctaa-ttattcctaatcctagttaacactccaattatcact-taaaaccctaattctaagatttttaggcgccaa 17726107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 22368254 - 22368211
Alignment:
Q  58 aatctaacttattcctaatcctagttaacactccaattatcact 101  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  22368254 aatctaacttattcctaatcctagttaacacttcaattatcact 22368211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 31771428 - 31771384
Alignment:
Q  59 atctaacttattcctaatcctagttaacactccaattatcactcc 103  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  31771428 atctaacttattcctaatcctagttaacactccaaataacactcc 31771384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 1721556 - 1721593
Alignment:
Q  59 atctaacttattcctaatcctagttaacactccaatta 96  Q
    |||||||||||||||||||||| |||||||||||||||    
T  1721556 atctaacttattcctaatcctaattaacactccaatta 1721593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 7608440 - 7608396
Alignment:
Q  59 atctaacttattcctaatcctagttaacactccaattatcactcc 103  Q
    ||||||||||||||||||||||||||| ||||||| || ||||||    
T  7608440 atctaacttattcctaatcctagttaaaactccaaataacactcc 7608396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 168; Significance: 5e-90; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 54 - 303
Target Start/End: Complemental strand, 16262741 - 16262486
Alignment:
Q  54 atctaatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaactaattatggccattggat 153  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  16262741 atctaatctaacttattcctaatcctagttaacacttcaattatcactccaaaaccctaatcctaaagttttaggcgccaactaattatggcccttggat 16262642  T
Q  154 tgatccagccctttatatcaagctttgtgaaacgcgtgcatagttccaacgtttgcattg----ttccaatgcttcggttaccaatggaatgc--atagt 247  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||| ||| ||||||||||    ||||||||||| ||||||||||| |||||  |||||    
T  16262641 tgatccagccgtttatatcaaactttgtgaaacgcgtgcattgtttcaatgtttgcattgttaattccaatgctttggttaccaatgtaatgcatatagt 16262542  T
Q  248 aaaacaacaacctctccaacccaccctcttcatcgtctatttctctcctccctctc 303  Q
    ||||||||||||||||||||||||||||||||| ||   |||||||||||||||||    
T  16262541 aaaacaacaacctctccaacccaccctcttcattgttgctttctctcctccctctc 16262486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 21820228 - 21820154
Alignment:
Q  59 atctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaa 134  Q
    |||||||||||||||||||||| ||||||||||||||| ||||  |||||| |||  ||| | |||||||||||||    
T  21820228 atctaacttattcctaatcctaattaacactccaattaacact-taaaaccataattctacatttttaggcgccaa 21820154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 134
Target Start/End: Original strand, 44546023 - 44546092
Alignment:
Q  64 acttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaa 134  Q
    ||||||| ||||||||| |||||| | |||  ||||||||||| |||||| ||||| ||||||||||||||    
T  44546023 acttatttctaatcctaattaacattgcaacaatcactccaaa-ccctaaccctaatattttaggcgccaa 44546092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 32651336 - 32651249
Alignment:
Q  47 tcatctaatctaatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaa-aattttaggcgccaa 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||| | |||||||||||||    
T  32651336 tcatctaatctaatctaacttattcctaatcctagttaacactccaattatcact-taaaaccctaattctaagatttttaggcgccaa 32651249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 41810163 - 41810213
Alignment:
Q  51 ctaatctaatctaacttattcctaatcctagttaacactccaattatcact 101  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  41810163 ctaatctaatctaacttatttctaatcctagttaacactccaattaccact 41810213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 3649873 - 3649945
Alignment:
Q  61 ctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaa 134  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |||   |||||||||||||    
T  3649873 ctaacttattcctaatcctagttaacactccaattaacact-taaaaccctaaatctacttttttaggcgccaa 3649945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 38467775 - 38467723
Alignment:
Q  49 atctaatctaatctaacttattcctaatcctagttaacactccaattatcact 101  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  38467775 atctaatctaatctaacttatttataatcctagttaacactccaattaacact 38467723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 26720237 - 26720271
Alignment:
Q  59 atctaacttattcctaatcctagttaacactccaa 93  Q
    |||||||||||||||||||||||||||||||||||    
T  26720237 atctaacttattcctaatcctagttaacactccaa 26720271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 31444761 - 31444845
Alignment:
Q  49 atctaatctaatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaa 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||||  ||| |||||||||||||||    
T  31444761 atctaatctaatctaacttattcctaatcctagttaacactccaattactact-taaaaccctaattctataattttaggcgccaa 31444845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 33054223 - 33054143
Alignment:
Q  53 aatctaatctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaa 134  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||  |||||||||||||||   |||||||||||||    
T  33054223 aatctaatctaacttattcctaatcctaattaacactacaattaacact-taaaaccctaaacctacttttttaggcgccaa 33054143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 27444122 - 27444161
Alignment:
Q  54 atctaatctaacttattcctaatcctagttaacactccaa 93  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  27444122 atctaatctaacttattcctaatcgtagttaacactccaa 27444161  T

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Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 44663737 - 44663663
Alignment:
Q  59 atctaacttattcctaatcctagttaacactccaattatcactccaaaaccctaaacctaaaattttaggcgccaa 134  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||  |||  ||||||||||||||    
T  44663737 atctaacttattcctaatcctagttaacactccaattaccact-taaaaccctaattctatgattttaggcgccaa 44663663  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 35348991 - 35349033
Alignment:
Q  59 atctaacttattcctaatcctagttaacactccaattatcact 101  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  35348991 atctaacttatttctaatcctagttaacactccaattaacact 35349033  T

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Target: scaffold0152 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 10195 - 10242
Alignment:
Q  59 atctaacttattcctaatcctagttaacactccaattatcactccaaa 106  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  10195 atctaacttattcccaatcctagttaacactccaattaacactccaaa 10242  T

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Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 32608 - 32649
Alignment:
Q  52 taatctaatctaacttattcctaatcctagttaacactccaa 93  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  32608 taatctaatctaacttatttctaatcctagttaacactccaa 32649  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 37062 - 37015
Alignment:
Q  59 atctaacttattcctaatcctagttaacactccaattatcactccaaa 106  Q
    |||||||||||||||||||||| ||||||||||||||| |||| ||||    
T  37062 atctaacttattcctaatcctaattaacactccaattaacacttcaaa 37015  T

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Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 43239 - 43200
Alignment:
Q  54 atctaatctaacttattcctaatcctagttaacactccaa 93  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  43239 atctaatctaacttattcctaatcgtagttaacactccaa 43200  T

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