View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3032_low_48 (Length: 209)
Name: NF3032_low_48
Description: NF3032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3032_low_48 |
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Alignment Details
Target: chr2 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 36036353 - 36036525
Alignment:
| Q |
18 |
aagattcttatgctattattgtctttacctaaaccaggtgaatctcttaattcatacttcatatgcgaatgccttaaagcaaaaccatcctcatccacag |
117 |
Q |
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| T |
36036353 |
aagattcttatgctattattgtctttacctaaaccaggtgaatctcttaattcatacttcatatgcgaatgccttaaagcaaaaccatcctcatccacag |
36036452 |
T |
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| Q |
118 |
tctccggcaacgaaccagcaacttcttcattcctcgccgttctcctcaccggctgctcaaccttcacctggcc |
190 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36036453 |
tctgcggcaacgaaccagcaacttcttcattcctcgccgttctcctcaccggctgctcaaccttcacctggcc |
36036525 |
T |
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