View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3036-Insertion-10 (Length: 339)
Name: NF3036-Insertion-10
Description: NF3036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3036-Insertion-10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 5 - 339
Target Start/End: Original strand, 37951322 - 37951648
Alignment:
| Q |
5 |
acataacataatgcgatacttcgtcatttaaaattcaggttcacacttcaatacaatatatcctactgttatacaaatatctaacatattcttctcatca |
104 |
Q |
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| T |
37951322 |
acataacataatgcgatacttcgtcatttaaaattcagtttcacacttcaatacaatatatcctactgttatacaaatatctaacatattcttctcatca |
37951421 |
T |
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| Q |
105 |
caatttatgcgatcattagtcaataactatgtgatctctttgtacccatcatacattgaatttaatatatcacgtatcatcacaatctatgcacatatta |
204 |
Q |
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| T |
37951422 |
caatttatgcgatcattagtcaataactatgtgatctctttgtacccatcatacattgaatttaatatatcacatatcatcacaatctatgcacatatta |
37951521 |
T |
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| Q |
205 |
tacattcaattcatcaactactatttctatggctaatggtggaaattacccagtaatacatgtgaaattgtgaagtatggaaataacatacgtaaacaaa |
304 |
Q |
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| T |
37951522 |
tacattcaattcatcaactactatttctatggttaatggtggaaataacccagtaataca--------tgtgaagtatggaaataacatacgtaaacaaa |
37951613 |
T |
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| Q |
305 |
atagattctacgcctataatttgaaattcctccta |
339 |
Q |
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| T |
37951614 |
atagattctacgcctctaatttgaaattcctccta |
37951648 |
T |
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