View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3036_high_6 (Length: 278)
Name: NF3036_high_6
Description: NF3036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3036_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 6 - 262
Target Start/End: Original strand, 9427841 - 9428097
Alignment:
| Q |
6 |
aggagcagagattataaggttggaattccaaataattccaaacaattatttgttttgattaatgaattaacattgtcatcaactctctattttccaaaga |
105 |
Q |
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| T |
9427841 |
aggagcaaaaattataaggttggaattccaaataattccaaacaattatttgttttgattaatgaattaacattgtcatcaactatctattttccaaaga |
9427940 |
T |
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| Q |
106 |
aatttacctaaccaacatgtaactgctcattataaccgaaaagaannnnnnncctatgcatatgaagacctcaattttctttcttatattacacacaggt |
205 |
Q |
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| T |
9427941 |
aatttacctaaccaacatgtaactgctcattataaccgaaaagaatttttttcctatgcatatgaagacctcaattttctttcttatattacacacaggt |
9428040 |
T |
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| Q |
206 |
tgcaactttggcaccaaatactccagcacactatgagcttcattttggtgtaccaat |
262 |
Q |
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| T |
9428041 |
tgcaactttggcaccaaatactccagcacactatgagcttcattttggtgtaccaat |
9428097 |
T |
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