View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3039_low_36 (Length: 278)
Name: NF3039_low_36
Description: NF3039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3039_low_36 |
 | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0038 (3 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 44)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 16 - 263
Target Start/End: Original strand, 31285185 - 31285432
Alignment:
| Q |
16 |
atcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaagggg |
115 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285185 |
atcaatcgtgtgcccttacatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaagggg |
31285284 |
T |
|
| Q |
116 |
tccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttt |
215 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
31285285 |
tacacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttattggtgatcaatttgacggattatgttt |
31285384 |
T |
|
| Q |
216 |
tcttcatgatgtgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285385 |
tcttcatgatgtgagagagaattcagctaaaaataacttgaaacatct |
31285432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 263
Target Start/End: Original strand, 26803072 - 26803319
Alignment:
| Q |
16 |
atcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaagggg |
115 |
Q |
| |
|
||||||||| ||||||| ||||||| ||||||||||||||||| | | |||| ||||| ||||||||| |||||||||| ||| | || || | |||| |
|
|
| T |
26803072 |
atcaatcgtcagcccttacatgttgctaattaccctgttggattgcactctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatgggg |
26803171 |
T |
|
| Q |
116 |
tccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttt |
215 |
Q |
| |
|
|||| ||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| || |||||||| |
|
|
| T |
26803172 |
tccatatggttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttt |
26803271 |
T |
|
| Q |
216 |
tcttcatgatgtgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26803272 |
tcttcatgatgtgagagagaattcagctcaaaataacttgaaacatct |
26803319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 16 - 263
Target Start/End: Original strand, 26623897 - 26624144
Alignment:
| Q |
16 |
atcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaagggg |
115 |
Q |
| |
|
|||||||||||||||||| ||||||| || |||||||||||||| ||| || | ||||||||||||||| ||||||||||| | | || || | |||| |
|
|
| T |
26623897 |
atcaatcgtgtgcccttacatgttgctaaataccctgttggattacagtctcaactacaacaagtgaaatcacttcttgataatggatctgatgatgggg |
26623996 |
T |
|
| Q |
116 |
tccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttt |
215 |
Q |
| |
|
|||| ||||| ||| | |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||| || |||||||| |
|
|
| T |
26623997 |
tccatatggttggaatgtatgggattggaggcttgggcaaatcaacacttgcaagagcaatctataactttgttgctgatcaatttgaaggtttatgttt |
26624096 |
T |
|
| Q |
216 |
tcttcatgatgtgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26624097 |
tcttcatgatgtgagagagaattcagctcaaaataacttgaaacatct |
26624144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 16 - 263
Target Start/End: Original strand, 26729874 - 26730121
Alignment:
| Q |
16 |
atcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaagggg |
115 |
Q |
| |
|
|||||||||||||||||| ||||||| || |||||||||||||| ||| || | ||||||||||||||| ||||||||||| | | || || | |||| |
|
|
| T |
26729874 |
atcaatcgtgtgcccttacatgttgctaaataccctgttggattacagtctcaactacaacaagtgaaatcacttcttgataatggatctgatgatgggg |
26729973 |
T |
|
| Q |
116 |
tccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttt |
215 |
Q |
| |
|
|||| ||||| ||| | |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||| || |||||||| |
|
|
| T |
26729974 |
tccatatggttggaatgtatgggattggaggcttgggcaaatcaacacttgcaagagcaatctataactttgttgctgatcaatttgaaggtttatgttt |
26730073 |
T |
|
| Q |
216 |
tcttcatgatgtgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26730074 |
tcttcatgatgtgagagagaattcagctcaaaataacttgaaacatct |
26730121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 28 - 263
Target Start/End: Complemental strand, 27705948 - 27705713
Alignment:
| Q |
28 |
cccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtag |
127 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| ||||||||| ||| | || || | |||||||| ||||| | |
|
|
| T |
27705948 |
cccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcacttcttgatgagggacctgatgatggggtccatatggttg |
27705849 |
T |
|
| Q |
128 |
gactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgt |
227 |
Q |
| |
|
|| ||| ||| || ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| || |||||||||||||||||||| |
|
|
| T |
27705848 |
gaatttttggcattggaggcttgggtaaatcaacacttgcaagagcaatttataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
27705749 |
T |
|
| Q |
228 |
gagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
27705748 |
gagagagaattcagctcaaaatgacttgaaacatct |
27705713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 27 - 263
Target Start/End: Original strand, 27679587 - 27679823
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| |||||||||| ||| | | || | |||||||| ||||| |
|
|
| T |
27679587 |
gcccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggatccgatgatggggtccatatggtt |
27679686 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||| ||||||| || ||||| ||||| |||||||||||||||||| ||||||||||||| ||| |||||||| || || | ||||||||||||||||| |
|
|
| T |
27679687 |
ggaatttatggcattggaggtttggggaaatcaacacttgcaagacaaatctataattttgttgcagatcaattcgaaggttcatgttttcttcatgatg |
27679786 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
27679787 |
tgagagagaattcagctcaaaataacttgaaatatct |
27679823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 27 - 263
Target Start/End: Complemental strand, 27698131 - 27697895
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| || | ||||| |||||||| |||||||||| | | || || | |||||||| ||||| |
|
|
| T |
27698131 |
gcccttacatgttgccaattaccctgttggattacagtctcaagtacaaagagtgaaatcaattcttgataatggatctgatgatggggtccatatggtt |
27698032 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||| ||| |||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| || ||||||||||||||| ||| |
|
|
| T |
27698031 |
ggaatttttgggattggaggcttgggaaaatcaacacttgcaagagcaatctataatttggttgctgatcaatttgaaggtttatgttttcttcataatg |
27697932 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
27697931 |
tgagaatgaattcagctaaaaataacttggaacatct |
27697895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 29 - 259
Target Start/End: Complemental strand, 27427155 - 27426925
Alignment:
| Q |
29 |
ccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtagg |
128 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| |||||||||| ||| | || || | |||||||| ||||| || |
|
|
| T |
27427155 |
ccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttgg |
27427056 |
T |
|
| Q |
129 |
actttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtg |
228 |
Q |
| |
|
| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||| || |||||||||||| | | || |
|
|
| T |
27427055 |
aatttatgggattggaggctcaggtaaatcaacacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtc |
27426956 |
T |
|
| Q |
229 |
agagagaattcagctaaaaataacttgaaac |
259 |
Q |
| |
|
||||||||||||||| ||||| |||||||| |
|
|
| T |
27426955 |
agagagaattcagcttcaaatagcttgaaac |
27426925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 35 - 263
Target Start/End: Original strand, 26647124 - 26647352
Alignment:
| Q |
35 |
atgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggacttta |
134 |
Q |
| |
|
|||| ||||| |||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||| || || |||||||||| |||||||||||||| |
|
|
| T |
26647124 |
atgtagccaaataccctgttggattagagtcccgattagaacaagtgaaattgcttcttgataaagaatctgatgaaggggtccatatggtaggacttta |
26647223 |
T |
|
| Q |
135 |
tgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagag |
234 |
Q |
| |
|
||| | ||||| |||||||||||||||||||| | ||| || ||||||||| ||| |||||||||||| || |||| ||||||||| |||| |||||| |
|
|
| T |
26647224 |
tggtactggaggtttgggtaaatcaacacttgccaaagcgatttataattttgttgctgatcaatttgaaggtgtatgctttcttcataatgtcagagag |
26647323 |
T |
|
| Q |
235 |
aattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||| | ||||||||||||||||| |
|
|
| T |
26647324 |
aattcagctcataataacttgaaacatct |
26647352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 35 - 263
Target Start/End: Original strand, 26753092 - 26753320
Alignment:
| Q |
35 |
atgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggacttta |
134 |
Q |
| |
|
|||| ||||| |||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||| || || |||||||||| |||||||||||||| |
|
|
| T |
26753092 |
atgtagccaaataccctgttggattagagtcccgattagaacaagtgaaattgcttcttgataaagaatctgatgaaggggtccatatggtaggacttta |
26753191 |
T |
|
| Q |
135 |
tgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagag |
234 |
Q |
| |
|
||| | ||||| |||||||||||||||||||| | ||| || ||||||||| ||| |||||||||||| || |||| ||||||||| |||| |||||| |
|
|
| T |
26753192 |
tggtactggaggtttgggtaaatcaacacttgccaaagcgatttataattttgttgctgatcaatttgaaggtgtatgctttcttcataatgtcagagag |
26753291 |
T |
|
| Q |
235 |
aattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||| | ||||||||||||||||| |
|
|
| T |
26753292 |
aattcagctcataataacttgaaacatct |
26753320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 37 - 263
Target Start/End: Complemental strand, 27337630 - 27337404
Alignment:
| Q |
37 |
gttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatg |
136 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||| |||||||||| ||||||||||||||| ||||| || || |||||||| |||||||||||||||||| |
|
|
| T |
27337630 |
gttgccaaataccctgttggattacagtcccgagtacaacaagtaaaattgcttcttgatgaggaatctgatgaaggggtcaacatggtaggactttatg |
27337531 |
T |
|
| Q |
137 |
ggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaa |
236 |
Q |
| |
|
| | |||||||||| |||||||||||||||| |||||| |||||||| ||| |||||||||||| ||| |||| ||||||||| |||| |||||||| |
|
|
| T |
27337530 |
gtactagaggcttgggaaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaaggagtatgctttcttcataatgttagagagaa |
27337431 |
T |
|
| Q |
237 |
ttcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||| || |||||||||||||| |
|
|
| T |
27337430 |
ttcagctcgtaaaaacttgaaacatct |
27337404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 37 - 263
Target Start/End: Complemental strand, 27398370 - 27398144
Alignment:
| Q |
37 |
gttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatg |
136 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||| |||||||||| ||||||||||||||| ||||| || || |||||||| |||||||||||||||||| |
|
|
| T |
27398370 |
gttgccaaataccctgttggattacagtcccgagtacaacaagtaaaattgcttcttgatgaggaatctgatgaaggggtcaacatggtaggactttatg |
27398271 |
T |
|
| Q |
137 |
ggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaa |
236 |
Q |
| |
|
| | |||||||||| |||||||||||||||| |||||| |||||||| ||| |||||||||||| ||| |||| ||||||||| |||| |||||||| |
|
|
| T |
27398270 |
gtactagaggcttgggaaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaaggagtatgctttcttcataatgttagagagaa |
27398171 |
T |
|
| Q |
237 |
ttcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||| || |||||||||||||| |
|
|
| T |
27398170 |
ttcagctcgtaaaaacttgaaacatct |
27398144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 35 - 263
Target Start/End: Original strand, 26656610 - 26656838
Alignment:
| Q |
35 |
atgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggacttta |
134 |
Q |
| |
|
|||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||||||| | |||| | | ||| | ||||||||||||||| |
|
|
| T |
26656610 |
atgttgccaaataccctgttggattagagtctcgagtacaacaagtgaaattgcttcttgataagggatctaaggatgaggttctcatggtaggacttta |
26656709 |
T |
|
| Q |
135 |
tgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagag |
234 |
Q |
| |
|
||| | |||||| ||||||||||||||||||| | |||||| ||||||||| | | |||||||||||| || ||||||||||||| |||| |||||| |
|
|
| T |
26656710 |
tggtactggaggcatgggtaaatcaacacttgccaaagcaatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcagagag |
26656809 |
T |
|
| Q |
235 |
aattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||| | ||||| ||||||||||| |
|
|
| T |
26656810 |
aattcagctcataataatttgaaacatct |
26656838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 35 - 263
Target Start/End: Original strand, 26762581 - 26762809
Alignment:
| Q |
35 |
atgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggacttta |
134 |
Q |
| |
|
|||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||||||| | |||| | | ||| | ||||||||||||||| |
|
|
| T |
26762581 |
atgttgccaaataccctgttggattagagtctcgagtacaacaagtgaaattgcttcttgataagggatctaaggatgaggttctcatggtaggacttta |
26762680 |
T |
|
| Q |
135 |
tgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagag |
234 |
Q |
| |
|
||| | |||||| ||||||||||||||||||| | |||||| ||||||||| | | |||||||||||| || ||||||||||||| |||| |||||| |
|
|
| T |
26762681 |
tggtactggaggcatgggtaaatcaacacttgccaaagcaatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcagagag |
26762780 |
T |
|
| Q |
235 |
aattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||| | ||||| ||||||||||| |
|
|
| T |
26762781 |
aattcagctcataataatttgaaacatct |
26762809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 27 - 263
Target Start/End: Original strand, 28786875 - 28787111
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||||| | | | || || | || |||| ||||||| |
|
|
| T |
28786875 |
gcccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatgatggagtccgcatggta |
28786974 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||| || |||||| ||||||||| || |||||||||||| | | |||||||||| | ||| |
|
|
| T |
28786975 |
ggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatg |
28787074 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
28787075 |
tgagagagaattcagcttcaaataaattgaaacatct |
28787111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 263
Target Start/End: Original strand, 26862230 - 26862453
Alignment:
| Q |
40 |
gccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggga |
139 |
Q |
| |
|
||||| |||||||||||||| |||| ||| || |||||||||||||||||||||||| |||| || || ||||||| |||||||||||||||||||| | |
|
|
| T |
26862230 |
gccaaataccctgttggattaaagtcccgagtagaacaagtgaaattgcttcttgatatggaatctgatgaaggggtacacatggtaggactttatggta |
26862329 |
T |
|
| Q |
140 |
taggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattc |
239 |
Q |
| |
|
|||||| |||| |||||||||||||||| |||||| ||||||||| ||| ||||||||||| || |||||||||||||| | || ||||||||||| |
|
|
| T |
26862330 |
ctggaggcatggggaaatcaacacttgcaaaagcaatttataattttgttgccgatcaatttgaaggtgtatgttttcttcataaagttagagagaattc |
26862429 |
T |
|
| Q |
240 |
agctaaaaataacttgaaacatct |
263 |
Q |
| |
|
| || | |||| |||||||||||| |
|
|
| T |
26862430 |
aactcataatagcttgaaacatct |
26862453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 28 - 263
Target Start/End: Complemental strand, 27718043 - 27717808
Alignment:
| Q |
28 |
cccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtag |
127 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||||| | | || || | || ||||||||||||| |
|
|
| T |
27718043 |
cccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtag |
27717944 |
T |
|
| Q |
128 |
gactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgt |
227 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||||||||| |||||| ||||||||| ||| |||||||||||| | | |||||||||| | |||| |
|
|
| T |
27717943 |
gactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgt |
27717844 |
T |
|
| Q |
228 |
gagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||| || |||||| ||||||||||| |
|
|
| T |
27717843 |
gagagagaattcaacttcaaataaattgaaacatct |
27717808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 263
Target Start/End: Original strand, 26884715 - 26884943
Alignment:
| Q |
35 |
atgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggacttta |
134 |
Q |
| |
|
|||| ||||| |||||||||||||| ||| ||| |||||||| | ||||||||||||||||||||| |||| ||||||| |||||||||||| |||| |
|
|
| T |
26884715 |
atgtagccaaataccctgttggattacagtaccgagtacaacaattaaaattgcttcttgataaggaatctaacgaaggggtacacatggtaggaattta |
26884814 |
T |
|
| Q |
135 |
tgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagag |
234 |
Q |
| |
|
||| | |||||||||||||||||||||||||||| |||||| ||||||| | ||| |||||||||||| | |||||||||| ||| | || || ||| |
|
|
| T |
26884815 |
tggtactggaggcttgggtaaatcaacacttgcaaaagcaatttataattatgttgctgatcaatttgaatgtgtatgttttctgcataaagtcagggag |
26884914 |
T |
|
| Q |
235 |
aattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
|||||| || | ||||||||||||||||| |
|
|
| T |
26884915 |
aattcaactcataataacttgaaacatct |
26884943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 263
Target Start/End: Complemental strand, 27604249 - 27604013
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||||||| ||| ||||||| ||| |||| ||||||||||||||| ||||||||| | | || || | || |||||||||||| |
|
|
| T |
27604249 |
gcccttacatgttgccaattatcctattggattgcagtctcgagtacaacaagtgaaatctcttcttgatgaaagatctgatgatggagtccacatggta |
27604150 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||||||||||| | ||||| |||||||||||||||||||||| |||||| ||||||||| ||| |||||||||||| | | |||||||||| | ||| |
|
|
| T |
27604149 |
ggactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatg |
27604050 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
27604049 |
tgagagagaattcagcttcaaataaattgaaacatct |
27604013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 263
Target Start/End: Original strand, 28792996 - 28793232
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||||| | | | || || | || |||| ||||||| |
|
|
| T |
28792996 |
gcccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatgatggagtccgcatggta |
28793095 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||| || |||||| ||||||||| || |||||||||||| | | |||||||||| | ||| |
|
|
| T |
28793096 |
ggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatg |
28793195 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||||||| |
|
|
| T |
28793196 |
tgagagagagttcagcttcaaatagattgaaacatct |
28793232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 263
Target Start/End: Complemental strand, 27610664 - 27610429
Alignment:
| Q |
28 |
cccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtag |
127 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||| || | ||||| ||||||||| |||||||||| | | || || | || ||||||||||||| |
|
|
| T |
27610664 |
cccttacatgttgccaattaccctgttggattgcagtctcaagtacaagaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtag |
27610565 |
T |
|
| Q |
128 |
gactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgt |
227 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||||||||| |||||| ||||||||| ||| |||||||||||| | | |||||||||| | |||| |
|
|
| T |
27610564 |
gactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgt |
27610465 |
T |
|
| Q |
228 |
gagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||| || |||||| ||||||||||| |
|
|
| T |
27610464 |
gagagagaattcaacttcaaataaattgaaacatct |
27610429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 27 - 263
Target Start/End: Complemental strand, 27592566 - 27592330
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| |||||||||| | | | || || | |||||||| ||||| |
|
|
| T |
27592566 |
gcccttaaatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatcatggggtccatatggtt |
27592467 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||| |||||||||| ||||||||||| |||||||||||||| | |||||| ||||| ||| ||| |||||||||||| | | |||||||||| | ||| |
|
|
| T |
27592466 |
ggaatttatgggattggaggcttgggaaaatcaacacttgcgaaagcaatttataactttattgctgatcaatttgaatgctcatgttttcttgaaaatg |
27592367 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||| ||||| ||||||| ||||||||||||| |||| |
|
|
| T |
27592366 |
tgaaagagagttcagcttcaaataacttgaaaaatct |
27592330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 263
Target Start/End: Complemental strand, 27677164 - 27676929
Alignment:
| Q |
28 |
cccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtag |
127 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||| ||| |||| |||||||| |||||| |||||||||| | | | || || | |||||||| ||||| | |
|
|
| T |
27677164 |
cccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaaatgaaatcgcttcttgatgaaggatctgatcatggggtccatatggttg |
27677065 |
T |
|
| Q |
128 |
gactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgt |
227 |
Q |
| |
|
|| |||||||||| ||||||||||| |||||||||||||| | |||||| ||||||||| ||| |||||||||||| | | |||||||||| | |||| |
|
|
| T |
27677064 |
gaatttatgggattggaggcttgggaaaatcaacacttgcgaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgt |
27676965 |
T |
|
| Q |
228 |
gagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
|| ||||| ||||||| ||||||||||||| |||| |
|
|
| T |
27676964 |
gaaagagagttcagcttcaaataacttgaaaaatct |
27676929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 263
Target Start/End: Original strand, 25580372 - 25580595
Alignment:
| Q |
40 |
gccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggga |
139 |
Q |
| |
|
||||| |||||||||||||| ||| |||||| |||||||||||||||||||||| | || || | | | |||||||||||||||||||||||| | |
|
|
| T |
25580372 |
gccaaataccctgttggattacagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgaggatgtggtccacatggtaggactttatggta |
25580471 |
T |
|
| Q |
140 |
taggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattc |
239 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||| | ||||||||| ||| |||||||||||| || |||||||||||||| |||| ||||||| ||| |
|
|
| T |
25580472 |
ctggaggcatgggtaaatcaacacttgcaaaagcagtttataattttgttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagatttc |
25580571 |
T |
|
| Q |
240 |
agctaaaaataacttgaaacatct |
263 |
Q |
| |
|
| | ||||||||||||||||| |
|
|
| T |
25580572 |
aattcttaataacttgaaacatct |
25580595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 263
Target Start/End: Original strand, 25483709 - 25483932
Alignment:
| Q |
40 |
gccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggga |
139 |
Q |
| |
|
||||| |||||||||||||| ||| |||||| |||||||||||||||||||||| | || || | | | ||||| |||||||||||||| ||| | |
|
|
| T |
25483709 |
gccaaataccctgttggattacagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgaggatgaggtccgcatggtaggactttttggta |
25483808 |
T |
|
| Q |
140 |
taggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattc |
239 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||| | | ||||||||||| |||||||||||| || |||||||||||||| |||| ||||||||||| |
|
|
| T |
25483809 |
ctggaggcatgggtaaatcaacacttgcaaaagcagtttttaattttcttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattc |
25483908 |
T |
|
| Q |
240 |
agctaaaaataacttgaaacatct |
263 |
Q |
| |
|
| | | |||||| |||||||||| |
|
|
| T |
25483909 |
aagtcataataacctgaaacatct |
25483932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 263
Target Start/End: Original strand, 28781741 - 28781974
Alignment:
| Q |
30 |
cttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgat-aaggaaactaataaaggggtccacatggtagg |
128 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||| ||| ||||||||||||||| |||||||| | ||||| | | |||| || ||| |||||||| |
|
|
| T |
28781741 |
cttacatgttgccaattaccctgttggattacagtcccgagtacaacaagtgaaatcgcttcttggtgaaggata-tgataatggagtcaggatggtagg |
28781839 |
T |
|
| Q |
129 |
actttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtg |
228 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||| || |||| | ||||| || ||| |||||||||||| | | |||||||||| | ||||| |
|
|
| T |
28781840 |
actttatggtactggaggcttgggtaaatcaacacttgtaaaagcagtttataacttaattgctgatcaatttgaatgctcatgttttcttgaaaatgtg |
28781939 |
T |
|
| Q |
229 |
agagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||| |
|
|
| T |
28781940 |
agagagaattcagcttcaaataaattgaaacatct |
28781974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 240
Target Start/End: Complemental strand, 25492875 - 25492651
Alignment:
| Q |
16 |
atcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaagggg |
115 |
Q |
| |
|
||||||||||| | ||| |||||||||| |||||||||||||| | | ||| ||||||| |||||||||||||| ||| ||| | || | | | | |
|
|
| T |
25492875 |
atcaatcgtgtttcattacatgttgccaaataccctgttggattacaatcccgagtacaacacgtgaaattgcttctagatgaggtatctgaggatgagt |
25492776 |
T |
|
| Q |
116 |
tccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttt |
215 |
Q |
| |
|
|||||||||||||||||||||| | |||||||| ||||||||||||||||||| | |||||||||| || ||| |||||||||||| || |||||||| |
|
|
| T |
25492775 |
tccacatggtaggactttatggtactggaggcttaggtaaatcaacacttgcaaaatcaatctataacttcattgctgatcaatttgaaggtttatgttt |
25492676 |
T |
|
| Q |
216 |
tcttcatgatgtgagagagaattca |
240 |
Q |
| |
|
||| |||||||||||||||||| |
|
|
| T |
25492675 |
tctaggagatgtgagagagaattca |
25492651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 263
Target Start/End: Original strand, 25539184 - 25539416
Alignment:
| Q |
31 |
ttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggac |
130 |
Q |
| |
|
|||||||| ||||| |||||||||||||| ||| | |||| |||||||||||||||||||||| || || | | | ||||| ||||||||||| |
|
|
| T |
25539184 |
ttatatgtggccaaataccctgttggattacagtccccaatagaacaagtgaaattgcttcttgacttgggctctgaggatgaggtccgcatggtaggac |
25539283 |
T |
|
| Q |
131 |
tttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgag |
230 |
Q |
| |
|
||||||| | |||||| ||||||||||||||||||||| |||| | | ||||||| ||| |||||||||||| | |||||||||||||| |||| || |
|
|
| T |
25539284 |
tttatggtactggaggcatgggtaaatcaacacttgcaaaagcagtttttaattttgttgctgatcaatttgaagttgtatgttttcttcataatgtcag |
25539383 |
T |
|
| Q |
231 |
agagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
|||||||||| | | ||||||||||||||||| |
|
|
| T |
25539384 |
agagaattcaagtcataataacttgaaacatct |
25539416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 263
Target Start/End: Original strand, 26143513 - 26143741
Alignment:
| Q |
35 |
atgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggacttta |
134 |
Q |
| |
|
|||| ||||| |||||||||||||| ||| |||||| || ||||||||||||||||||| | || || | | | ||||| |||||||||||||| |
|
|
| T |
26143513 |
atgtagccaaataccctgttggattacagtcccgaatagaagaagtgaaattgcttcttgacatgggctctgaggatgaggtccgcatggtaggactttt |
26143612 |
T |
|
| Q |
135 |
tgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagag |
234 |
Q |
| |
|
||| | |||||| ||||||||||||||||||||| |||| | ||||||||| ||| |||||||||||| || |||||||||||||| |||| |||||| |
|
|
| T |
26143613 |
tggtactggaggcatgggtaaatcaacacttgcaaaagcagtttataattttgttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagag |
26143712 |
T |
|
| Q |
235 |
aattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
|||||| | | |||||| |||||||||| |
|
|
| T |
26143713 |
aattcaagtcataataacctgaaacatct |
26143741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 263
Target Start/End: Original strand, 26056572 - 26056795
Alignment:
| Q |
40 |
gccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggga |
139 |
Q |
| |
|
||||| |||||||||||||| ||| |||||| |||||||||||||||||||||| | || || | || | ||||| |||||||||| ||| ||| | |
|
|
| T |
26056572 |
gccaaataccctgttggattgcagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgagaatgaggtccgcatggtaggaatttttggta |
26056671 |
T |
|
| Q |
140 |
taggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattc |
239 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||| | | ||||| | ||| |||||||||||| || |||||||||||||| |||| ||||||||||| |
|
|
| T |
26056672 |
ccggaggcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattc |
26056771 |
T |
|
| Q |
240 |
agctaaaaataacttgaaacatct |
263 |
Q |
| |
|
| || || |||||||||||||| |
|
|
| T |
26056772 |
aactcttaagaacttgaaacatct |
26056795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 263
Target Start/End: Original strand, 26076542 - 26076765
Alignment:
| Q |
40 |
gccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggga |
139 |
Q |
| |
|
||||| |||||||||||||| ||| |||||| |||||||||||||||||||||| | || || | || | ||||| |||||||||| ||| ||| | |
|
|
| T |
26076542 |
gccaaataccctgttggattgcagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgagaatgaggtccgcatggtaggaatttttggta |
26076641 |
T |
|
| Q |
140 |
taggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattc |
239 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||| | | ||||| | ||| |||||||||||| || |||||||||||||| |||| ||||||||||| |
|
|
| T |
26076642 |
ccggaggcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattc |
26076741 |
T |
|
| Q |
240 |
agctaaaaataacttgaaacatct |
263 |
Q |
| |
|
| || || |||||||||||||| |
|
|
| T |
26076742 |
aactcttaagaacttgaaacatct |
26076765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 260
Target Start/End: Original strand, 27215131 - 27215322
Alignment:
| Q |
69 |
aatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgca |
168 |
Q |
| |
|
|||||||||||| |||||||||||||| |||| | |||| ||| ||||||||||||||||||| |||| |||||| |||||||||||||||||||| |
|
|
| T |
27215131 |
aatacaacaagtaaaattgcttcttgacaagggatctaaggaagaggtccacatggtaggacttcatggagctggaggcatgggtaaatcaacacttgca |
27215230 |
T |
|
| Q |
169 |
agagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaaca |
260 |
Q |
| |
|
| |||||| | |||||| ||| |||||| ||||| || | || |||||| | ||||||| |||||||||| || ||||||||||||||| |
|
|
| T |
27215231 |
aaagcaatttttaatttcattgctgatcagtttgaaggttcatattttctagaagatgtgaaagagaattcaactttaaataacttgaaaca |
27215322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 263
Target Start/End: Complemental strand, 27530852 - 27530610
Alignment:
| Q |
21 |
tcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccac |
120 |
Q |
| |
|
||||| ||||||| |||||||||| || ||||||||||| ||| ||| ||||||| |||||| || ||||||| | || || || | | ||||||| |
|
|
| T |
27530852 |
tcgtgagcccttagatgttgccaaatatcctgttggattacagtcccgagtacaacatgtgaaagggcatcttgatgaaaaatctgatgatgaggtccac |
27530753 |
T |
|
| Q |
121 |
atggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttc |
220 |
Q |
| |
|
||||||||||||||||| | |||||| | ||||||||||||||||||| |||||| |||||||| ||| |||||||||||| | ||||||||||| |
|
|
| T |
27530752 |
atggtaggactttatggtactggaggcataggtaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaagttttatgttttctag |
27530653 |
T |
|
| Q |
221 |
atgatgtgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
| ||||||||| |||||| || | |||||||||||||||| |
|
|
| T |
27530652 |
aaaatgtgagagtgaattcgacttcagataacttgaaacatct |
27530610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 245
Target Start/End: Original strand, 26824464 - 26824674
Alignment:
| Q |
35 |
atgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggacttta |
134 |
Q |
| |
|
|||||||||| ||||| |||||||| ||| ||| ||||||||||||||| ||||||||||| ||| || || | | |||||| |||||||||||||| |
|
|
| T |
26824464 |
atgttgccaaatacccggttggattacagtcccgagtacaacaagtgaaatctcttcttgataacgaatctgatgatgtggtccatatggtaggacttta |
26824563 |
T |
|
| Q |
135 |
tgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagag |
234 |
Q |
| |
|
|| || ||||| || ||||||||||||||||||| ||||| | ||||| | ||| |||| ||||||| | || ||||||||| | | ||||||||| |
|
|
| T |
26824564 |
cggtattggaggtttaggtaaatcaacacttgcaaaagcaacttttaattctattgctgataaatttgaagttttttgttttcttgagaacgtgagagag |
26824663 |
T |
|
| Q |
235 |
aattcagctaa |
245 |
Q |
| |
|
||||||||||| |
|
|
| T |
26824664 |
aattcagctaa |
26824674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 28140276 - 28140391
Alignment:
| Q |
131 |
tttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgag |
230 |
Q |
| |
|
|||||||||| ||||| | ||||||| ||||||||||| |||||| ||||||||| ||| ||||||||||| | || |||||||||||| ||||||| |
|
|
| T |
28140276 |
tttatgggatgggagggtcgggtaaaacaacacttgcacaagcaatttataattttattgccgatcaatttgaatgtttgtgttttcttcataatgtgag |
28140375 |
T |
|
| Q |
231 |
agagaattcagctaaa |
246 |
Q |
| |
|
||| | |||||||||| |
|
|
| T |
28140376 |
agaaatttcagctaaa |
28140391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 25511645 - 25511765
Alignment:
| Q |
143 |
gaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagc |
242 |
Q |
| |
|
||||| ||||||||||||||||||||| |||| | | ||||| | ||| |||||||||||| | |||||||||||||| |||| |||||||||||| | |
|
|
| T |
25511645 |
gaggcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaac |
25511744 |
T |
|
| Q |
243 |
taaaaataacttgaaacatct |
263 |
Q |
| |
|
| || |||||||||||||| |
|
|
| T |
25511745 |
tcttaagaacttgaaacatct |
25511765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 26937790 - 26937866
Alignment:
| Q |
151 |
ggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgt |
227 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||| |||||||||||||||| | || |||||||||||| |||| |
|
|
| T |
26937790 |
ggtaaatcaacacttgcacgagcaatttataatttgattggtgatcaatttgaaagtttgtgttttcttcataatgt |
26937866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 28227720 - 28227808
Alignment:
| Q |
158 |
caacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
246 |
Q |
| |
|
||||||||||||| ||| | ||||||||| | | |||||||||||||| || ||||||||||| ||||| || || |||||||||||| |
|
|
| T |
28227720 |
caacacttgcaagggcagtttataattttatagccgatcaatttgatggtttgtgttttcttcacgatgtaagggaaaattcagctaaa |
28227808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 29826727 - 29826842
Alignment:
| Q |
131 |
tttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgag |
230 |
Q |
| |
|
||||||| || || || ||||||||| |||||||||| ||||||| |||||| | |||||||| ||||||| | || |||||||||||||| |||| |
|
|
| T |
29826727 |
tttatggaattggcggattgggtaaaacaacacttgctcgagcaatttataatatgattggtgataaatttgaatgcttgtgttttcttcatgacttgag |
29826826 |
T |
|
| Q |
231 |
agagaattcagctaaa |
246 |
Q |
| |
|
||| | |||||||||| |
|
|
| T |
29826827 |
agaaagttcagctaaa |
29826842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 28243563 - 28243651
Alignment:
| Q |
158 |
caacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
246 |
Q |
| |
|
||||||||||||||||| | ||||||| | | ||||||||||||| | |||||||||||||| ||||| || || |||||| ||||| |
|
|
| T |
28243563 |
caacacttgcaagagcagtttataattccatagctgatcaatttgattgtttatgttttcttcacgatgtaagggaaaattcaactaaa |
28243651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 246
Target Start/End: Complemental strand, 29843428 - 29843313
Alignment:
| Q |
131 |
tttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgag |
230 |
Q |
| |
|
||||||| || || || ||||||||| |||||||||| ||||||| |||||||| ||| |||| ||||||| | || ||||||||||| || | ||| |
|
|
| T |
29843428 |
tttatggaattggtggattgggtaaaacaacacttgctcgagcaatttataatttgattgctgataaatttgaatgtttgtgttttcttcacgacgggag |
29843329 |
T |
|
| Q |
231 |
agagaattcagctaaa |
246 |
Q |
| |
|
||| | |||||||||| |
|
|
| T |
29843328 |
agaaagttcagctaaa |
29843313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 28186163 - 28186249
Alignment:
| Q |
160 |
acacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
246 |
Q |
| |
|
||||||||||||||| | ||||||| || | |||||||||||||| || ||||||||||| ||||| || | |||||||||||| |
|
|
| T |
28186163 |
acacttgcaagagcagtttataattccctagctgatcaatttgatgatttgtgttttcttcacgatgtaaggggaaattcagctaaa |
28186249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 25511588 - 25511640
Alignment:
| Q |
40 |
gccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttct |
92 |
Q |
| |
|
||||| |||||||||||||| ||| |||||| ||||||||||||||||||| |
|
|
| T |
25511588 |
gccaaataccctgttggattgcagtcccgaatagaacaagtgaaattgcttct |
25511640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 28235333 - 28235421
Alignment:
| Q |
158 |
caacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
246 |
Q |
| |
|
||||||||||||||||| | ||||||| | | ||||||||||||||| || ||||||||||| || || || || |||||| ||||| |
|
|
| T |
28235333 |
caacacttgcaagagcagtttataattccatagctgatcaatttgatggtttgtgttttcttcacgacgtaagggaaaattcatctaaa |
28235421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 144; Significance: 9e-76; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 16 - 263
Target Start/End: Complemental strand, 267896 - 267649
Alignment:
| Q |
16 |
atcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaagggg |
115 |
Q |
| |
|
|||| ||||| ||||||| ||||||||||||||||||||||||| || || | |||||||||||||||||||||||||||| | | || || | |||| |
|
|
| T |
267896 |
atcagtcgtgagcccttacatgttgccaattaccctgttggattatggtctcaagtacaacaagtgaaattgcttcttgataatggatctgatgatgggg |
267797 |
T |
|
| Q |
116 |
tccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttt |
215 |
Q |
| |
|
|||| ||||| ||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| ||||||||||| |
|
|
| T |
267796 |
tccatatggttggaatttatgggattggaggcttgggtaaatcaacccttgcaagagcaatctataattttattgctgatcaatttgaaggattatgttt |
267697 |
T |
|
| Q |
216 |
tcttcatgatgtgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
|||||||||||||||||| |||||||||| || ||||||||||||||| |
|
|
| T |
267696 |
tcttcatgatgtgagagaaaattcagctataagtaacttgaaacatct |
267649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 263
Target Start/End: Complemental strand, 28127231 - 28126984
Alignment:
| Q |
16 |
atcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaagggg |
115 |
Q |
| |
|
||||||||||| |||| |||||||||| || ||||||||||| || | | ||||||||||||| |||||||| ||||||| | | || | | || |
|
|
| T |
28127231 |
atcaatcgtgttttcttacatgttgccaaatatcctgttggattacaggaccaagtacaacaagtgaatttgcttctcgataagggatatgatgatgagg |
28127132 |
T |
|
| Q |
116 |
tccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttt |
215 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||| |||||||| ||| |||||||||||| || |||||||| |
|
|
| T |
28127131 |
tccacatggtaggactttatggtattggaggcttgggtaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaaggtttatgttt |
28127032 |
T |
|
| Q |
216 |
tcttcatgatgtgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||| | ||||||||||||| |||| || | |||| ||||||||||| |
|
|
| T |
28127031 |
tctagaagatgtgagagagatttcaactccatataatttgaaacatct |
28126984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 71 - 240
Target Start/End: Complemental strand, 28163876 - 28163707
Alignment:
| Q |
71 |
tacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaag |
170 |
Q |
| |
|
|||||||||||||||||||||| ||||||| | | || | | ||||||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
28163876 |
tacaacaagtgaaattgcttctcgataagggatatgatgatgaggtccacatggtaggactttatgatactggaggcttgggtaaatcaacacttgcaaa |
28163777 |
T |
|
| Q |
171 |
agcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattca |
240 |
Q |
| |
|
|||||| |||||||| ||| |||||||||||| || ||||||||||| | |||||||||||||||||| |
|
|
| T |
28163776 |
agcaatttataatttcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagaattca |
28163707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 25 - 263
Target Start/End: Complemental strand, 29273385 - 29273147
Alignment:
| Q |
25 |
gtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatgg |
124 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||| ||| || | |||||||||| |||| |||||||||||| | | || || | ||| |||| |||| |
|
|
| T |
29273385 |
gtgcccttacatgttgccaaataccctgttggattacagtctcaagtacaacaagtcaaatcgcttcttgataatggatctgatgatgggatccatatgg |
29273286 |
T |
|
| Q |
125 |
taggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatga |
224 |
Q |
| |
|
| ||| |||||||||| || ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| | ||||||||||||||||| |
|
|
| T |
29273285 |
ttggaatttatgggattggtggcttgggtaaatcaacccttgcaagagcaatctataatttttttgctgatcaatttgaagatttatgttttcttcatga |
29273186 |
T |
|
| Q |
225 |
tgtgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29273185 |
tgtgagagagaattcagctaaaaataacttgaaacatct |
29273147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 29 - 259
Target Start/End: Original strand, 60208 - 60438
Alignment:
| Q |
29 |
ccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtagg |
128 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| |||||||||| ||| | || || | |||||||| ||||| || |
|
|
| T |
60208 |
ccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttgg |
60307 |
T |
|
| Q |
129 |
actttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtg |
228 |
Q |
| |
|
| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||| || |||||||||||| | | || |
|
|
| T |
60308 |
aatttatgggattggaggctcaggtaaatcaacacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtc |
60407 |
T |
|
| Q |
229 |
agagagaattcagctaaaaataacttgaaac |
259 |
Q |
| |
|
||||||||||||||| ||||| |||||||| |
|
|
| T |
60408 |
agagagaattcagcttcaaatagcttgaaac |
60438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 29 - 259
Target Start/End: Original strand, 18074400 - 18074630
Alignment:
| Q |
29 |
ccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtagg |
128 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| |||||||||| ||| | || || | |||||||| ||||| || |
|
|
| T |
18074400 |
ccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttgg |
18074499 |
T |
|
| Q |
129 |
actttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtg |
228 |
Q |
| |
|
| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||| || |||||||||||| | | || |
|
|
| T |
18074500 |
aatttatgggattggaggctcaggtaaatcaacacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtc |
18074599 |
T |
|
| Q |
229 |
agagagaattcagctaaaaataacttgaaac |
259 |
Q |
| |
|
||||||||||||||| ||||| |||||||| |
|
|
| T |
18074600 |
agagagaattcagcttcaaatagcttgaaac |
18074630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 27 - 263
Target Start/End: Complemental strand, 18679101 - 18678865
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||||| | | || || | || |||| ||||||| |
|
|
| T |
18679101 |
gcccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaatgatcttatgatggagtccgcatggta |
18679002 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||||||||||| || |||||| ||||||||| ||||||||||| |||||| ||||||||| ||| |||||||||||| | | |||||||||| | ||| |
|
|
| T |
18679001 |
ggactttatggcattggaggcatgggtaaattaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatg |
18678902 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||||||| |||| | ||||||||||| |
|
|
| T |
18678901 |
tgagagagaattcagcttcaaatcaattgaaacatct |
18678865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 27 - 263
Target Start/End: Complemental strand, 18698941 - 18698705
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||| |||||||||||| | | || || | || |||| |||| || |
|
|
| T |
18698941 |
gcccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaagcgcttcttgataaaggatctgatgatggagtccgcatgtta |
18698842 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||||||||||| || |||||| ||||||||||||||||||| | |||||| ||||||||| ||| |||||||||||| | | |||||||||| | ||| |
|
|
| T |
18698841 |
ggactttatggcattggaggcatgggtaaatcaacacttgcgaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatg |
18698742 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||||||| |||| | ||||||||||| |
|
|
| T |
18698741 |
tgagagagaattcagcttcaaatcaattgaaacatct |
18698705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 263
Target Start/End: Complemental strand, 18723626 - 18723390
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||| |||||||||||| || ||| |||| ||||||||||||||| |||||||||||| | | ||||| || |||| |||| || |
|
|
| T |
18723626 |
gcccttacatgttgccacttaccctgttgggttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatctaatggtggagtccgcatgata |
18723527 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||||||||||| || |||||| |||| |||||||||||||||| || ||| ||||||||| ||| |||||||||||| | | |||||||||| | | | |
|
|
| T |
18723526 |
ggactttatggtattggaggcatgggaaaatcaacacttgcaaaaggaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaacg |
18723427 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||||||| |||| | ||||||||||| |
|
|
| T |
18723426 |
tgagagagaattcagcttcaaatcaattgaaacatct |
18723390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 27 - 263
Target Start/End: Complemental strand, 18731045 - 18730809
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||| |||||||||||| || ||| |||| ||||||||||||||| |||||||||||| | | || || || |||| |||| || |
|
|
| T |
18731045 |
gcccttacatgttgccatttaccctgttgggttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatcttatggtggagtccgcatgata |
18730946 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||||||||||| || |||||| |||| |||||||||||||| | || ||| ||||||||| ||| |||||||||||| | | |||||||||| | ||| |
|
|
| T |
18730945 |
ggactttatggtattggaggcatgggaaaatcaacacttgctaaagtaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatg |
18730846 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||||||| |||| | ||||||||||| |
|
|
| T |
18730845 |
tgagagagaattcagcttcaaatcaattgaaacatct |
18730809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 263
Target Start/End: Complemental strand, 18655018 - 18654782
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||| ||||| |||||||||||| || ||| |||| ||||||||||||||| |||||||||||| | | || || || |||| |||| || |
|
|
| T |
18655018 |
gcccttacatgctgccagttaccctgttgggttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatctgatggtggagtccgcatgata |
18654919 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||||||||||| || |||||| |||| |||||||||||||||| | |||| |||||| | ||| |||||||||||| | | |||||||||| | ||| |
|
|
| T |
18654918 |
ggactttatggtattggaggcatgggaaaatcaacacttgcaaaatcaattaataattgtattgctgatcaatttgaatgctcatgttttcttgaaaatg |
18654819 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||| |||||| || |||| | ||||||||||| |
|
|
| T |
18654818 |
tgagagaaaattcatcttcaaatcaattgaaacatct |
18654782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 28 - 263
Target Start/End: Complemental strand, 3083 - 2848
Alignment:
| Q |
28 |
cccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtag |
127 |
Q |
| |
|
|||||| ||||||||||||||||||||||| | |||| |||| ||||||||||||||| |||||||||| | | || || | || ||||||||||||| |
|
|
| T |
3083 |
cccttacatgttgccaattaccctgttggaatgaagtctcgagtacaacaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtag |
2984 |
T |
|
| Q |
128 |
gactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgt |
227 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||||||||| |||||| ||||||||| ||| |||||||||||| | | |||||||||| | |||| |
|
|
| T |
2983 |
gactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgt |
2884 |
T |
|
| Q |
228 |
gagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||| |
|
|
| T |
2883 |
gagagagaattcagcttcaaataaattgaaacatct |
2848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 27 - 263
Target Start/End: Original strand, 8124 - 8360
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| |||| ||||||| ||||||| |||||||||| | | | || || | || |||||||||||| |
|
|
| T |
8124 |
gcccttacatgttgccaattaccctgttggattacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatgatggagtccacatggta |
8223 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||| || |||||| ||||||||| || |||||||||||| | | |||||||||| | ||| |
|
|
| T |
8224 |
ggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatg |
8323 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
8324 |
tgagagagaattcagcttcaaataaattgaaacatct |
8360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 27 - 263
Target Start/End: Complemental strand, 13220 - 12984
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| |||| ||||||| ||||||| |||||||||| | | | || || | || |||||||||||| |
|
|
| T |
13220 |
gcccttacatgttgccaattaccctgttggattacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatgatggagtccacatggta |
13121 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||| || |||||| ||||||||| || |||||||||||| | | |||||||||| | ||| |
|
|
| T |
13120 |
ggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaaatg |
13021 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
13020 |
tgagagagaattcagcttcaaataaattgaaacatct |
12984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 27 - 263
Target Start/End: Complemental strand, 4257 - 4021
Alignment:
| Q |
27 |
gcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggta |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| |||| ||||||| ||||||| |||||||||| | | | || || | || | |||||||||| |
|
|
| T |
4257 |
gcccttacatgttgccaattaccctgttggattacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatcatggagcccacatggta |
4158 |
T |
|
| Q |
127 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatg |
226 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||| || |||||| ||||||||| ||| |||| ||||||| | | |||||||||| | ||| |
|
|
| T |
4157 |
ggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttattgctgatgaatttgaatgctcatgttttcttgaaaatg |
4058 |
T |
|
| Q |
227 |
tgagagagaattcagctaaaaataacttgaaacatct |
263 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
4057 |
tgagagagaattcagcttcaaataaattgaaacatct |
4021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 246
Target Start/End: Original strand, 16691628 - 16691723
Alignment:
| Q |
151 |
ggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
246 |
Q |
| |
|
|||||| |||||||||| ||||||| |||||||| ||| |||||||||||| | || |||||||||||||| |||||||| |||||| ||||| |
|
|
| T |
16691628 |
ggtaaaacaacacttgctcgagcaatttataatttgattgctgatcaatttgaatgtttgtgttttcttcatgacgtgagagaaaattcatctaaa |
16691723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 28218 - 28306
Alignment:
| Q |
158 |
caacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
246 |
Q |
| |
|
||||||||||||| ||| | ||||||||| | | |||||||||||||| || ||||||||||| ||||| || || |||||||||||| |
|
|
| T |
28218 |
caacacttgcaagggcagtttataattttatagccgatcaatttgatggtttgtgttttcttcacgatgtaagggaaaattcagctaaa |
28306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 43725 - 43813
Alignment:
| Q |
158 |
caacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
246 |
Q |
| |
|
||||||||||||||||| | ||||||| | | ||||||||||||| | |||||||||||||| ||||| || || |||||| ||||| |
|
|
| T |
43725 |
caacacttgcaagagcagtttataattccatagctgatcaatttgattgtttatgttttcttcacgatgtaagggaaaattcaactaaa |
43813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 35495 - 35583
Alignment:
| Q |
158 |
caacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagctaaa |
246 |
Q |
| |
|
||||||||||||||||| | ||||||| | | ||||||||||||||| || ||||||||||| || || || || |||||| ||||| |
|
|
| T |
35495 |
caacacttgcaagagcagtttataattccatagctgatcaatttgatggtttgtgttttcttcacgacgtaagggaaaattcatctaaa |
35583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 3280418 - 3280511
Alignment:
| Q |
149 |
tgggtaaatcaacacttgcaagagcaatctataattttcttggtgatcaatttgatggattatgttttcttcatgatgtgagagagaattcagc |
242 |
Q |
| |
|
||||||| |||| |||||||||||| | |||||||| ||| | |||||||||| | ||||||||||||| |||||||||| |||||||| |
|
|
| T |
3280418 |
tgggtaagacaactcttgcaagagcagtttataatttcattgctaatcaatttgaatgtgtatgttttcttcacaatgtgagagaaaattcagc |
3280511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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