View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3040R-Insertion-13 (Length: 566)

Name: NF3040R-Insertion-13
Description: NF3040R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3040R-Insertion-13
NF3040R-Insertion-13
[»] chr5 (65 HSPs)
chr5 (9-566)||(9251607-9252158)
chr5 (299-458)||(42851993-42852150)
chr5 (293-461)||(13060556-13060723)
chr5 (293-461)||(12986965-12987135)
chr5 (290-466)||(24030177-24030351)
chr5 (290-460)||(15413954-15414123)
chr5 (291-466)||(12467227-12467405)
chr5 (300-377)||(17128250-17128328)
chr5 (332-466)||(28625484-28625617)
chr5 (288-466)||(1576591-1576767)
chr5 (288-466)||(1608048-1608224)
chr5 (332-466)||(41059738-41059871)
chr5 (362-492)||(41419536-41419665)
chr5 (313-385)||(10537247-10537320)
chr5 (296-461)||(11991273-11991436)
chr5 (306-385)||(22201964-22202044)
chr5 (290-358)||(40697119-40697187)
chr5 (293-345)||(41125669-41125721)
chr5 (306-458)||(43318981-43319132)
chr5 (311-466)||(7364258-7364412)
chr5 (311-466)||(2878626-2878779)
chr5 (288-361)||(25332291-25332364)
chr5 (330-466)||(17657244-17657379)
chr5 (290-358)||(41059694-41059762)
chr5 (285-353)||(42558617-42558685)
chr5 (296-378)||(1473324-1473407)
chr5 (293-336)||(28970156-28970199)
chr5 (307-385)||(29922217-29922296)
chr5 (290-353)||(35536962-35537025)
chr5 (292-330)||(1372077-1372115)
chr5 (294-378)||(13739242-13739328)
chr5 (295-353)||(13739347-13739405)
chr5 (293-385)||(3520531-3520623)
chr5 (292-361)||(40416025-40416094)
chr5 (296-369)||(40452388-40452461)
chr5 (293-353)||(6125404-6125464)
chr5 (399-484)||(28357214-28357297)
chr5 (390-460)||(38498632-38498699)
chr5 (290-466)||(40152825-40153000)
chr5 (444-490)||(6144719-6144766)
chr5 (295-385)||(11163297-11163388)
chr5 (297-352)||(14243792-14243847)
chr5 (311-358)||(32964458-32964505)
chr5 (399-479)||(43268571-43268649)
chr5 (287-361)||(7565323-7565397)
chr5 (295-361)||(15122512-15122578)
chr5 (432-466)||(15167663-15167697)
chr5 (432-466)||(15364104-15364138)
chr5 (295-345)||(15709960-15710010)
chr5 (432-466)||(29136775-29136809)
chr5 (432-466)||(35083342-35083376)
chr5 (363-466)||(35536881-35536981)
chr5 (399-466)||(1943068-1943132)
chr5 (433-466)||(3977577-3977610)
chr5 (399-466)||(5559868-5559932)
chr5 (432-465)||(7364117-7364150)
chr5 (432-461)||(11163236-11163265)
chr5 (340-461)||(11912056-11912176)
chr5 (296-345)||(17668368-17668417)
chr5 (432-461)||(40697109-40697138)
chr5 (310-385)||(2670057-2670133)
chr5 (285-345)||(14243951-14244011)
chr5 (445-492)||(28625459-28625507)
chr5 (362-466)||(40452426-40452529)
chr5 (333-419)||(41534628-41534716)
[»] chr7 (39 HSPs)
chr7 (295-466)||(30181517-30181687)
chr7 (295-466)||(29390500-29390669)
chr7 (295-466)||(34922898-34923070)
chr7 (294-461)||(38372524-38372690)
chr7 (293-466)||(22032727-22032899)
chr7 (347-461)||(14691253-14691366)
chr7 (293-385)||(40629445-40629537)
chr7 (295-466)||(22575553-22575723)
chr7 (399-461)||(33288029-33288088)
chr7 (295-466)||(16932879-16933048)
chr7 (295-466)||(16938262-16938431)
chr7 (295-466)||(16958783-16958952)
chr7 (297-358)||(6406779-6406840)
chr7 (293-358)||(29390459-29390524)
chr7 (313-466)||(44613422-44613574)
chr7 (290-466)||(35809052-35809227)
chr7 (295-372)||(18837189-18837267)
chr7 (295-361)||(24371459-24371525)
chr7 (332-466)||(29378649-29378782)
chr7 (295-353)||(29378763-29378821)
chr7 (295-344)||(20888701-20888750)
chr7 (399-466)||(46744026-46744090)
chr7 (302-415)||(14536857-14536971)
chr7 (294-345)||(19496324-19496375)
chr7 (294-353)||(26331777-26331836)
chr7 (295-467)||(35246639-35246807)
chr7 (388-466)||(48949782-48949863)
chr7 (293-323)||(23119848-23119878)
chr7 (432-466)||(26331868-26331902)
chr7 (432-466)||(33204937-33204971)
chr7 (295-345)||(35331109-35331159)
chr7 (311-432)||(48021628-48021750)
chr7 (432-461)||(1401176-1401205)
chr7 (433-466)||(23356440-23356473)
chr7 (293-466)||(47654363-47654535)
chr7 (399-466)||(19914018-19914082)
chr7 (294-358)||(33287984-33288048)
chr7 (442-489)||(33288155-33288203)
chr7 (433-461)||(39279534-39279562)
[»] chr4 (67 HSPs)
chr4 (295-461)||(18424232-18424396)
chr4 (293-466)||(42611818-42611989)
chr4 (291-466)||(43415237-43415412)
chr4 (293-466)||(29877604-29877776)
chr4 (290-466)||(38345771-38345945)
chr4 (293-466)||(23297403-23297572)
chr4 (296-466)||(35405653-35405820)
chr4 (295-377)||(43699519-43699602)
chr4 (298-490)||(40699326-40699522)
chr4 (296-385)||(35124355-35124445)
chr4 (332-466)||(28074369-28074501)
chr4 (290-396)||(3564182-3564289)
chr4 (432-490)||(34633493-34633552)
chr4 (290-466)||(52700492-52700667)
chr4 (332-466)||(896974-897107)
chr4 (399-466)||(18630844-18630908)
chr4 (294-358)||(17222942-17223006)
chr4 (287-323)||(43136694-43136730)
chr4 (295-358)||(3564319-3564382)
chr4 (301-466)||(31022375-31022537)
chr4 (295-358)||(34633366-34633429)
chr4 (295-358)||(42153072-42153135)
chr4 (295-466)||(42617179-42617348)
chr4 (296-385)||(1374391-1374481)
chr4 (332-466)||(7148776-7148909)
chr4 (362-461)||(17222864-17222961)
chr4 (332-466)||(48591373-48591506)
chr4 (298-336)||(54593658-54593696)
chr4 (290-323)||(948223-948256)
chr4 (295-336)||(9153660-9153701)
chr4 (295-336)||(12022988-12023029)
chr4 (296-353)||(22273761-22273818)
chr4 (293-369)||(29996683-29996760)
chr4 (313-432)||(46704250-46704370)
chr4 (296-353)||(48591335-48591392)
chr4 (295-432)||(7206566-7206705)
chr4 (437-492)||(9319156-9319212)
chr4 (399-461)||(48721893-48721952)
chr4 (313-410)||(212950-213048)
chr4 (400-492)||(825756-825846)
chr4 (338-432)||(18258021-18258115)
chr4 (311-369)||(27368196-27368255)
chr4 (388-461)||(36298394-36298464)
chr4 (294-353)||(36741022-36741081)
chr4 (332-433)||(52274099-52274202)
chr4 (432-466)||(488333-488367)
chr4 (432-466)||(4331433-4331467)
chr4 (295-353)||(7148890-7148947)
chr4 (432-466)||(11256610-11256644)
chr4 (295-345)||(22117321-22117371)
chr4 (295-345)||(22823763-22823813)
chr4 (432-466)||(34526286-34526320)
chr4 (432-466)||(48667773-48667807)
chr4 (399-466)||(8601274-8601338)
chr4 (437-485)||(10046340-10046389)
chr4 (290-323)||(28663404-28663437)
chr4 (313-466)||(41228888-41229040)
chr4 (295-359)||(1374292-1374356)
chr4 (311-359)||(9319039-9319087)
chr4 (285-361)||(10794962-10795038)
chr4 (290-358)||(12495549-12495617)
chr4 (297-345)||(18258130-18258178)
chr4 (442-493)||(28663406-28663458)
chr4 (296-328)||(28663715-28663747)
chr4 (362-459)||(36254992-36255087)
chr4 (434-466)||(42153111-42153143)
chr4 (293-345)||(48687060-48687111)
[»] chr3 (39 HSPs)
chr3 (300-466)||(40581025-40581191)
chr3 (296-457)||(53217998-53218158)
chr3 (293-420)||(29270326-29270455)
chr3 (287-461)||(34707667-34707840)
chr3 (295-461)||(584987-585152)
chr3 (292-466)||(3845819-3845991)
chr3 (332-466)||(40240526-40240659)
chr3 (293-461)||(22809147-22809315)
chr3 (291-385)||(21296729-21296824)
chr3 (295-372)||(10272089-10272167)
chr3 (296-461)||(7292649-7292809)
chr3 (388-461)||(48597820-48597891)
chr3 (332-461)||(43079888-43080016)
chr3 (290-466)||(4974273-4974448)
chr3 (304-492)||(10667374-10667562)
chr3 (293-345)||(35480310-35480361)
chr3 (295-353)||(43079844-43079902)
chr3 (293-416)||(10448739-10448864)
chr3 (332-433)||(52021250-52021354)
chr3 (297-361)||(4257354-4257418)
chr3 (290-369)||(29002815-29002895)
chr3 (290-361)||(23555446-23555517)
chr3 (388-464)||(29830590-29830663)
chr3 (320-432)||(32901128-32901242)
chr3 (432-466)||(38524191-38524225)
chr3 (295-353)||(40240488-40240545)
chr3 (432-466)||(46573403-46573437)
chr3 (294-360)||(50022010-50022076)
chr3 (399-466)||(10449050-10449114)
chr3 (338-490)||(10521164-10521316)
chr3 (399-466)||(17752080-17752144)
chr3 (399-466)||(19053400-19053464)
chr3 (399-466)||(25341343-25341407)
chr3 (432-461)||(52895359-52895388)
chr3 (296-353)||(53261678-53261735)
chr3 (296-345)||(53261816-53261865)
chr3 (332-452)||(3870189-3870308)
chr3 (293-345)||(20685911-20685963)
chr3 (290-358)||(30383730-30383798)
[»] chr2 (42 HSPs)
chr2 (306-466)||(4026904-4027062)
chr2 (293-466)||(21788422-21788594)
chr2 (295-466)||(38215990-38216156)
chr2 (290-466)||(7480848-7481026)
chr2 (311-466)||(33321261-33321415)
chr2 (311-492)||(9140652-9140832)
chr2 (293-385)||(33321431-33321524)
chr2 (293-461)||(11776949-11777116)
chr2 (293-466)||(5903498-5903675)
chr2 (296-466)||(25836662-25836830)
chr2 (295-461)||(29774712-29774877)
chr2 (293-358)||(755619-755684)
chr2 (403-466)||(8832534-8832594)
chr2 (295-354)||(2757129-2757188)
chr2 (290-345)||(2790140-2790195)
chr2 (301-383)||(4090462-4090545)
chr2 (295-358)||(8832570-8832633)
chr2 (362-466)||(36501464-36501566)
chr2 (290-352)||(4533441-4533503)
chr2 (293-358)||(5903651-5903716)
chr2 (293-358)||(25836621-25836686)
chr2 (296-345)||(33321223-33321272)
chr2 (313-385)||(34913418-34913491)
chr2 (293-358)||(36501423-36501488)
chr2 (293-353)||(5903733-5903793)
chr2 (293-377)||(13097881-13097968)
chr2 (446-493)||(17317157-17317205)
chr2 (295-327)||(17317160-17317192)
chr2 (306-466)||(27880946-27881105)
chr2 (294-453)||(12683568-12683726)
chr2 (431-466)||(37420008-37420043)
chr2 (362-466)||(42064886-42064988)
chr2 (291-361)||(735882-735952)
chr2 (295-345)||(17317288-17317337)
chr2 (310-371)||(27703500-27703562)
chr2 (301-393)||(13056347-13056440)
chr2 (293-466)||(15155778-15155950)
chr2 (295-323)||(9140654-9140682)
chr2 (293-353)||(13098021-13098081)
chr2 (388-466)||(17546486-17546561)
chr2 (392-466)||(30382218-30382289)
chr2 (341-458)||(42839278-42839393)
[»] chr1 (53 HSPs)
chr1 (295-466)||(37712035-37712204)
chr1 (290-432)||(35590092-35590236)
chr1 (295-466)||(4068082-4068252)
chr1 (332-466)||(48819303-48819436)
chr1 (288-466)||(10365131-10365307)
chr1 (313-466)||(9572733-9572886)
chr1 (332-460)||(3069809-3069936)
chr1 (340-463)||(15515299-15515421)
chr1 (296-466)||(26946053-26946223)
chr1 (295-466)||(26988124-26988285)
chr1 (293-359)||(994620-994688)
chr1 (296-461)||(1565328-1565498)
chr1 (294-461)||(10082216-10082383)
chr1 (290-385)||(1265721-1265817)
chr1 (339-466)||(6337705-6337831)
chr1 (295-385)||(18327491-18327582)
chr1 (295-466)||(35897568-35897742)
chr1 (295-358)||(37329322-37329385)
chr1 (290-353)||(37431252-37431315)
chr1 (292-358)||(47413485-47413551)
chr1 (313-466)||(13038932-13039084)
chr1 (333-466)||(37329361-37329493)
chr1 (293-353)||(26946012-26946072)
chr1 (294-361)||(26542939-26543006)
chr1 (295-358)||(28690117-28690180)
chr1 (295-353)||(391135-391193)
chr1 (432-490)||(38781181-38781239)
chr1 (296-350)||(41196621-41196675)
chr1 (285-358)||(10849966-10850039)
chr1 (444-488)||(31378809-31378854)
chr1 (296-361)||(37148146-37148211)
chr1 (296-361)||(37156971-37157036)
chr1 (293-358)||(37712180-37712245)
chr1 (313-466)||(46689499-46689651)
chr1 (293-345)||(6900637-6900689)
chr1 (338-466)||(16888915-16889041)
chr1 (294-358)||(26988261-26988325)
chr1 (295-466)||(46473061-46473231)
chr1 (295-358)||(46500910-46500973)
chr1 (307-432)||(49738281-49738408)
chr1 (295-361)||(16225476-16225542)
chr1 (311-361)||(20169247-20169297)
chr1 (295-353)||(37569651-37569709)
chr1 (293-323)||(45267444-45267474)
chr1 (295-368)||(1565285-1565357)
chr1 (295-324)||(7145210-7145239)
chr1 (399-466)||(42591455-42591519)
chr1 (399-466)||(47413445-47413509)
chr1 (296-352)||(1321510-1321566)
chr1 (442-485)||(6337812-6337856)
chr1 (293-345)||(35275968-35276020)
chr1 (399-466)||(41576344-41576408)
chr1 (285-345)||(49971208-49971268)
[»] chr8 (37 HSPs)
chr8 (296-466)||(32131408-32131577)
chr8 (339-466)||(34286513-34286638)
chr8 (295-461)||(19925343-19925507)
chr8 (399-466)||(25333650-25333714)
chr8 (347-492)||(35168360-35168508)
chr8 (293-461)||(14942389-14942556)
chr8 (290-466)||(42363266-42363440)
chr8 (332-466)||(32975691-32975824)
chr8 (288-345)||(2019718-2019775)
chr8 (300-353)||(24087111-24087164)
chr8 (368-466)||(25465796-25465891)
chr8 (295-358)||(28879168-28879231)
chr8 (295-466)||(30973956-30974126)
chr8 (295-466)||(38338800-38338969)
chr8 (414-466)||(25671839-25671888)
chr8 (293-327)||(34286636-34286670)
chr8 (432-465)||(8752909-8752942)
chr8 (291-352)||(10213814-10213875)
chr8 (399-466)||(24350468-24350532)
chr8 (332-466)||(28879062-28879192)
chr8 (442-490)||(34286619-34286668)
chr8 (368-432)||(25333712-25333776)
chr8 (442-485)||(32213078-32213122)
chr8 (388-466)||(35055484-35055558)
chr8 (295-358)||(13131556-13131619)
chr8 (388-461)||(32924167-32924236)
chr8 (432-466)||(2669751-2669785)
chr8 (295-337)||(11460782-11460824)
chr8 (294-328)||(11460846-11460880)
chr8 (295-353)||(34286474-34286532)
chr8 (295-345)||(38195454-38195504)
chr8 (432-461)||(2019594-2019623)
chr8 (432-492)||(9130939-9131000)
chr8 (292-345)||(16972263-16972316)
chr8 (296-361)||(36907701-36907766)
chr8 (306-369)||(19327846-19327909)
chr8 (295-327)||(35168362-35168394)
[»] chr6 (30 HSPs)
chr6 (295-492)||(25430688-25430882)
chr6 (295-466)||(10687274-10687447)
chr6 (292-482)||(10873949-10874138)
chr6 (313-466)||(2255719-2255871)
chr6 (287-462)||(10184283-10184456)
chr6 (295-466)||(23239214-23239384)
chr6 (293-358)||(7267895-7267960)
chr6 (295-456)||(21891297-21891457)
chr6 (290-361)||(3211054-3211125)
chr6 (412-466)||(12816850-12816902)
chr6 (296-466)||(8014757-8014925)
chr6 (293-358)||(12816809-12816874)
chr6 (292-361)||(21871336-21871405)
chr6 (293-385)||(24625816-24625909)
chr6 (313-466)||(29623427-29623578)
chr6 (293-358)||(35071336-35071401)
chr6 (294-358)||(9764300-9764364)
chr6 (294-361)||(6632625-6632692)
chr6 (292-373)||(1172300-1172382)
chr6 (432-466)||(3210938-3210972)
chr6 (313-466)||(6758612-6758765)
chr6 (432-466)||(9201670-9201704)
chr6 (432-466)||(9202348-9202382)
chr6 (296-358)||(10755194-10755256)
chr6 (432-466)||(10755232-10755266)
chr6 (295-345)||(11795527-11795577)
chr6 (432-466)||(35071377-35071411)
chr6 (301-345)||(10619202-10619246)
chr6 (297-345)||(20776480-20776528)
chr6 (388-466)||(32165210-32165285)
[»] scaffold0191 (1 HSPs)
scaffold0191 (310-353)||(31246-31289)
[»] scaffold0012 (1 HSPs)
scaffold0012 (290-361)||(178462-178533)
[»] scaffold0057 (1 HSPs)
scaffold0057 (312-466)||(24338-24490)
[»] scaffold0024 (1 HSPs)
scaffold0024 (295-345)||(97116-97166)
[»] scaffold0015 (1 HSPs)
scaffold0015 (432-466)||(48577-48611)
[»] scaffold1088 (1 HSPs)
scaffold1088 (301-342)||(1267-1308)
[»] scaffold0157 (1 HSPs)
scaffold0157 (290-358)||(24860-24928)


Alignment Details
Target: chr5 (Bit Score: 400; Significance: 0; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 9 - 566
Target Start/End: Complemental strand, 9252158 - 9251607
Alignment:
Q  9 atgtctacaacctcatggccgagtgaccacttcttattatgtgtctcaaagtgtaagacctgcatgtgtttcacccgataaaagagtagagtaagtgtta 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9252158 atgtctacaacctcatggccgagtgaccacttctcattatgtgtctcaaagtgtaagacccgcatgtgtttcacccgataaaagagtagagtaagtgtta 9252059  T
Q  109 gaaagtgtttctaacatttcttttaaattaaatataagtttcaaaatgtgtcttcgaccaaatttagataacataaaatttgannnnnnnnnnnnactaa 208  Q
    |||||     |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||            |||||    
T  9252058 gaaag-----ctaacatttcttttaaattaaatataagtttcaaaacgtgtcttggaccaaatttagataacataaaatttgattatttttttt-actaa 9251965  T
Q  209 ataaacttatnnnnnnntagtgaacaaatttatttaataaataactcttacttggccctagggcgaatatatatgttataaggtctgtttggattgactt 308  Q
    |||||||| |       || ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  9251964 ataaacttgtaaaaaaatattgagcaaatttatttaataaataactcttacttggcactagggcgaatatatatgttatagggtctgtttgaattgactt 9251865  T
Q  309 atttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttcataagcttatcaagatagtttctaaaaaacaatgtatgaagata 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9251864 atttttgagcttatgtaaaacaacttattcaaataaagaagctttaatatattttcataagcttatcaagatagtttctaaaaaacaatgtatgaagata 9251765  T
Q  409 tagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacatagcttaaaaataagtcaatcaaaacggatccataaccctttta 508  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||| |||||||||     
T  9251764 tagttttcgttactgagaacttattatgaattaacataaaagcttatttatttacatagtttgaaaataagttaatcaaaacggatccaaaacccttttg 9251665  T
Q  509 acttacataacatccattccaataagtcaatccttatttatagcataatattacttgg 566  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9251664 acttatataacatccattccaataagtcaatccttatttatagcataatattacttgg 9251607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 299 - 458
Target Start/End: Original strand, 42851993 - 42852150
Alignment:
Q  299 ggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaa 396  Q
    |||||| |||||||||| ||||||| |||||| |||||||||||||| ||||||| ||||||| ||||||||||| |||||||||||| | |||||||||    
T  42851993 ggattggcttatttttgggcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaacaa 42852092  T
Q  397 tgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttattta 458  Q
      ||| || ||| | ||||||||||||| |||   |||||||||||||||||||||||||||    
T  42852093 cttat-aaaatacaattttcgttagtgagaac---ttatgaattaacataaaagcttattta 42852150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 293 - 461
Target Start/End: Complemental strand, 13060723 - 13060556
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaa 390  Q
    |||||||||||| ||||||| |||  |||||||||| ||||||| |||||||| ||||||| ||||||| ||||||||||| ||||| |||||| | |||    
T  13060723 ctgtttggattggcttatttctgatattatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaa 13060624  T
Q  391 aaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    |||||   ||||||| ||   ||||||||||||| |||   ||||||||||||||||||||||||||||||    
T  13060623 aaacagcttatgaagttaccattttcgttagtgagaac---ttatgaattaacataaaagcttatttattt 13060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 293 - 461
Target Start/End: Complemental strand, 12987135 - 12986965
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaa 390  Q
    |||||||||||| ||||||| |||  |||||||||| ||||||| |||||||| ||||||| ||||||| ||||||||||| ||||| |||||| | |||    
T  12987135 ctgtttggattggcttatttctgatattatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaa 12987036  T
Q  391 aaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    ||||| | ||||||| ||   |||| |||||||| ||||||| |   ||||||||||||||||||||||||    
T  12987035 aaacagtttatgaagttaccatttttgttagtgagaacttatgaattattaacataaaagcttatttattt 12986965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 290 - 466
Target Start/End: Original strand, 24030177 - 24030351
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct- 387  Q
    |||||||||||| |||||||||||| |||||||  |||||| ||||| |||||||| ||||||| ||||||| ||||||||||| ||||  |||||| |     
T  24030177 ggtctgtttggaatgacttatttttaagcttatacaaaacagcttatccaaataaataagcttttatgtattattcataagcttgtcaaagtagtttatg 24030276  T
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||| | |  || |||| | ||||||||||||| |||   |||||||||||||||||||||||||||||| ||||    
T  24030277 aaaaaacact-tgcgaggatacaattttcgttagtgagaac---ttatgaattaacataaaagcttatttatttgcata 24030351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 460
Target Start/End: Original strand, 15413954 - 15414123
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt-ct 387  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||||| |||||||| |||  |||||||||| || ||||| || | ||| |||||| ||    
T  15413954 ggtctgtttggattgacttattttagagcttatgcaaaacagcttatgcaaataaataagtattaatgtattattgataagtttgttaaggtagtttact 15414053  T
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatt 460  Q
    |||||||||  |||||| ||| | |||| ||||||   ||  | ||||||||||||||||||||||| |||||    
T  15414054 aaaaaacaacttatgaatatacaatttttgttagt---aagatcttatgaattaacataaaagcttaattatt 15414123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 291 - 466
Target Start/End: Original strand, 12467227 - 12467405
Alignment:
Q  291 gtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-- 387  Q
    ||||||||||||| | ||||||||||| ||||  |||| |  |||| |||||||| ||||||| ||||||| ||||||||||| ||||| |||||| |      
T  12467227 gtctgtttggattaaattatttttgagtttattcaaaaaatgttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatga 12467326  T
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||||||   |||||||| | | |||| |||||||| ||||||| |   | |||||||||||||||||||||| ||||    
T  12467327 aaaaaacagcttatgaagagacaatttttgttagtgagaacttatgaattactaacataaaagcttatttatttgcata 12467405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 377
Target Start/End: Original strand, 17128250 - 17128328
Alignment:
Q  300 gattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaa 377  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||| ||||||| ||||||| ||||||| ||||||||    
T  17128250 gattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataaacttatcaa 17128328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 466
Target Start/End: Original strand, 28625484 - 28625617
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| |||||||| ||||||| | ||||| ||||||||||| ||||| |||||| | ||||||||   |||||||||| | ||||||||||||| |||     
T  28625484 cttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacc 28625583  T
Q  430 tattatgaattaacataaaagcttatttatttacata 466  Q
    |||   |||||||||||||||||||||||||| ||||    
T  28625584 tat---gaattaacataaaagcttatttatttgcata 28625617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 288 - 466
Target Start/End: Original strand, 1576591 - 1576767
Alignment:
Q  288 aaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttcataagcttatcaagatagtttct 387  Q
    |||||| |||||||||| |||||| ||| ||||||| |||||| ||||  |||||||| || |||| |||||||||||||||||| ||||  |||||| |    
T  1576591 aaggtccgtttggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtattttcataagcttgtcaatgtagtttat 1576690  T
Q  388 -aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
      ||||||||  | |||||||| | |||| |||||||| |||   ||| ||||||||||||||   ||||||||| ||||    
T  1576691 ggaaaaacaacttgtgaagatacaatttttgttagtgagaac---ttaagaattaacataaaactgtatttatttgcata 1576767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 288 - 466
Target Start/End: Complemental strand, 1608224 - 1608048
Alignment:
Q  288 aaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttcataagcttatcaagatagtttct 387  Q
    |||||| |||||||||| |||||| ||| ||||||| |||||| ||||  |||||||| || |||| |||||||||||||||||| ||||  |||||| |    
T  1608224 aaggtccgtttggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtattttcataagcttgtcaatgtagtttat 1608125  T
Q  388 -aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
      ||||||||  | |||||||| | |||| |||||||| |||   ||| ||||||||||||||   ||||||||| ||||    
T  1608124 ggaaaaacaacttgtgaagatacaatttttgttagtgagaac---ttaagaattaacataaaactgtatttatttgcata 1608048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 332 - 466
Target Start/End: Complemental strand, 41059871 - 41059738
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaaaa-caatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| |||| ||| ||||||| ||||||| ||||||||||||||||| | |||| | ||||| ||   |||||||||  | ||||||||||||| ||||    
T  41059871 cttatgcaaacaaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaagattcaattttcgttagtgagaact 41059772  T
Q  430 tattatgaattaacataaaagcttatttatttacata 466  Q
    |||   |||||||||||||||||||||||||| ||||    
T  41059771 tat---gaattaacataaaagcttatttatttgcata 41059738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 362 - 492
Target Start/End: Original strand, 41419536 - 41419665
Alignment:
Q  362 ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatt 460  Q
    ||||||||||| ||||| |||||| | ||||||||   |||||||||| | ||||||||||||| ||||||| |   |||||||||||| ||||||||||    
T  41419536 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacttatca---attaacataaaaacttatttatt 41419632  T
Q  461 tacat-agcttaaaaataagtcaatcaaaacgg 492  Q
    | ||| |||| |||| |||||||||| ||||||    
T  41419633 ttcataagctcaaaagtaagtcaatccaaacgg 41419665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 385
Target Start/End: Complemental strand, 10537320 - 10537247
Alignment:
Q  313 ttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    |||||||||||||||||| ||||| |||||||| ||||||| ||||||| || |||||||| ||||||||||||    
T  10537320 ttgagcttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagttt 10537247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 461
Target Start/End: Original strand, 11991273 - 11991436
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaaaac 394  Q
    ||||||||||||||||||   ||||||| ||||||||||||  ||||||| ||||||| ||||||| || |||||||| | || || |||| | |||||     
T  11991273 tttggattgacttattttaatgcttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaaaaa 11991372  T
Q  395 aatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
     |  |||||| ||| | ||||||||||||| |     |||| |||||||||||||||||||||||||    
T  11991373 tagttatgaacatacaattttcgttagtgaga---gtttataaattaacataaaagcttatttattt 11991436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 306 - 385
Target Start/End: Complemental strand, 22202044 - 22201964
Alignment:
Q  306 cttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    |||||||||||||||||| |||||| |||||  ||||||| ||||||| ||||||| ||||||||||| ||||| ||||||    
T  22202044 cttatttttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagttt 22201964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 40697187 - 40697119
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    ||||||||||||||| |||||||||||||||||| |||| | ||||| |||||||| ||||||| ||||    
T  40697187 ggtctgtttggattggcttatttttgagcttatgaaaaatagcttatacaaataaataagcttttatgt 40697119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 41125669 - 41125721
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||||||| |||||||||||||||||| |||||||||||| ||||||||    
T  41125669 ctgtttggattggcttatttttgagcttatgcaaaacaacttatgcaaataaa 41125721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 306 - 458
Target Start/End: Original strand, 43318981 - 43319132
Alignment:
Q  306 cttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatga 403  Q
    |||||||| ||||||||| |||||||||||| |||||||| | |  || ||||||| || |||||||| | ||  |||||| | |||||||| | |||||    
T  43318981 cttattttagagcttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatga 43319080  T
Q  404 agatatagttttcgttagtgaaaacttattatgaattaacataaaagcttattta 458  Q
    || |||| ||||||||||||| |||   ||||||||||| |||||| ||||||||    
T  43319081 aggtataattttcgttagtgagaac---ttatgaattaagataaaaacttattta 43319132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 466
Target Start/End: Complemental strand, 7364412 - 7364258
Alignment:
Q  311 ttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaa-aaacaatgtatgaagata 408  Q
    |||||||||||||||||||| || || |||| ||| ||||||  || |||| ||||||||||| | ||| |||||| | || ||||||  ||||||||||    
T  7364412 ttttgagcttatgtaaaacagctgatgcaaaaaaataagcttctatttattattcataagcttgttaaggtagtttatcaacaaacaacttatgaagata 7364313  T
Q  409 tagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
     | | || |||||||| |||||||   ||||||| |||||||||||||||||| ||||    
T  7364312 caatatttgttagtgagaacttat---gaattaatataaaagcttatttatttgcata 7364258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 311 - 466
Target Start/End: Complemental strand, 2878779 - 2878626
Alignment:
Q  311 ttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaa-aacaatgtatgaagata 408  Q
    |||||||||||||  ||||| ||||| |||||||| ||||||| || |||| |||||||| || ||||  | |||| | ||| |||| | || |||||||    
T  2878779 ttttgagcttatgctaaacagcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagttta-gaagata 2878681  T
Q  409 tagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
     | |||| |||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  2878680 caatttttgttagtgaaaactt-tta--aattaacataaaagcttatttatttacata 2878626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 25332364 - 25332291
Alignment:
Q  288 aaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    ||||||||||||||||| |||||||| ||| |||||||||| | ||||| |||||||| |||| ||||| ||||    
T  25332364 aaggtctgtttggattgtcttattttagagtttatgtaaaatagcttatgcaaataaataagcattaatatatt 25332291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 466
Target Start/End: Original strand, 17657244 - 17657379
Alignment:
Q  330 aacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaa 427  Q
    ||||||| |||||||| ||||||| ||||||| |||||||||||  ||   |||||| | ||||||||   ||||||||||   ||||||||||||| ||    
T  17657244 aacttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaa 17657343  T
Q  428 cttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||   ||||||||||||||| |||||||||| ||||    
T  17657344 cttat---gaattaacataaaaggttatttatttgcata 17657379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 41059694 - 41059762
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    ||||||||||||| | |||||||||||||||||| ||||||  |||| |||||||| ||||||| ||||    
T  41059694 ggtctgtttggatgggcttatttttgagcttatgaaaaacagtttatgcaaataaataagcttttatgt 41059762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 42558617 - 42558685
Alignment:
Q  285 tataaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||||| ||||||| |||| |||||||||||||||||| |||| | ||||| |||||||| |||||||    
T  42558617 tataaggcctgtttgaattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttt 42558685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 1473324 - 1473407
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaag 378  Q
    ||||||||  ||| |||||||||||||  | |||||||||| |||||||| ||||||| ||||||| ||||||||||| |||||    
T  1473324 tttggatttgcttctttttgagcttatacagaacaacttatgcaaataaataagcttttatgtattattcataagcttgtcaag 1473407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 293 - 336
Target Start/End: Complemental strand, 28970199 - 28970156
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttat 336  Q
    |||||||||||| |||||||||||||||||| ||||||||||||    
T  28970199 ctgtttggattggcttatttttgagcttatgcaaaacaacttat 28970156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 29922296 - 29922217
Alignment:
Q  307 ttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    ||||||||||||||||| ||||||  |||| |||||||| ||| ||| ||||||| ||||||||||| ||||| ||||||    
T  29922296 ttatttttgagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagttt 29922217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 353
Target Start/End: Complemental strand, 35537025 - 35536962
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    |||| ||||||||||||||||||||||| ||||| |||| | ||||| |||||||| |||||||    
T  35537025 ggtccgtttggattgacttatttttgagattatgaaaaatagcttatgcaaataaataagcttt 35536962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 330
Target Start/End: Complemental strand, 1372115 - 1372077
Alignment:
Q  292 tctgtttggattgacttatttttgagcttatgtaaaaca 330  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  1372115 tctgtttggattgacttatttttgagcttatgcaaaaca 1372077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 13739242 - 13739328
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagc-tttaatgtatt-ttcataagcttatcaag 378  Q
    ||||||| |||||||||||||||||||||  |||||| ||||| || ||||| |||| ||| ||||||| || ||||||||||||||    
T  13739242 tgtttgggttgacttatttttgagcttattcaaaacagcttatgcatataaataagctttttatgtattattgataagcttatcaag 13739328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 13739405 - 13739347
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    |||||||||| |||||||||||| ||||| |||| ||||||| |||||||| |||||||    
T  13739405 gtttggattggcttatttttgagtttatgaaaaataacttatgcaaataaataagcttt 13739347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 385
Target Start/End: Complemental strand, 3520623 - 3520531
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    |||||||||||||||||||||| |||||||| ||||||  ||||  ||||||| || |||| | ||||| ||||||||||| ||||| ||||||    
T  3520623 ctgtttggattgacttattttttagcttatgcaaaacagtttatgtaaataaataacctttta-gtattattcataagcttgtcaaggtagttt 3520531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 292 - 361
Target Start/End: Complemental strand, 40416094 - 40416025
Alignment:
Q  292 tctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    |||||||||||||| ||||| | ||||||||| |||||||||||| |||||||  || | ||||||||||    
T  40416094 tctgtttggattgatttattatagagcttatgcaaaacaacttatgcaaataactaaacattaatgtatt 40416025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 369
Target Start/End: Original strand, 40452388 - 40452461
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttcataag 369  Q
    ||||||||| |||||||||||||||||| |||| | ||||| |||||||| ||||| | |||| | ||||||||    
T  40452388 tttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagctattatgtttattcataag 40452461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 6125464 - 6125404
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    |||||||||||||||| ||||||| |||||| |||| | ||||| |||||||| |||||||    
T  6125464 ctgtttggattgacttctttttgaacttatgaaaaatagcttatgcaaataaataagcttt 6125404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 484
Target Start/End: Original strand, 28357214 - 28357297
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacat-agcttaaaaataagtcaat 484  Q
    |||||||||| | |||||||||  |||||||||| |   |||||||||||||||||||||||| ||| |||| ||||||||| ||||    
T  28357214 tatgaagatacaattttcgttaacgaaaacttataa---attaacataaaagcttatttatttgcataagctaaaaaataagccaat 28357297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 460
Target Start/End: Original strand, 38498632 - 38498699
Alignment:
Q  390 aaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatt 460  Q
    |||||||| ||| |||||||| |||| ||||||||||||   |||| |||||| |||||||||||||||||    
T  38498632 aaaacaatttataaagatataatttttgttagtgaaaac---ttataaattaaaataaaagcttatttatt 38498699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 466
Target Start/End: Complemental strand, 40153000 - 40152825
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttc-ataagcttatcaagatagtttct- 387  Q
    |||| |||| |||||| ||  ||||||| |||| |||||||| ||||  ||||||| ||| ||| || |||| || ||||  || | |||||||||| |     
T  40153000 ggtcagttttgattgagtttattttgagtttatctaaaacaatttatataaataaataagtttttatttattatccataaatttgttaagatagtttatg 40152901  T
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||| |||||||||| | ||||||||  ||| |||||||   ||||||| ||||||| |||||||||| ||||    
T  40152900 aaaaaacaatttatgaagataaaattttcgttcttgagaacttat---gaattaatataaaagattatttatttgcata 40152825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 490
Target Start/End: Complemental strand, 6144766 - 6144719
Alignment:
Q  444 ataaaagcttatttatttacat-agcttaaaaataagtcaatcaaaac 490  Q
    |||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  6144766 ataaaagcttatttatttacatgagctcaaaaataagtcaatctaaac 6144719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 11163388 - 11163297
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtat-tttcataagcttatcaagatagttt 385  Q
    |||||||||||||||||||| |||||||| |||||| |||||  |||| || ||| ||| ||||||  ||||||||||| || || ||||||    
T  11163388 gtttggattgacttattttttagcttatgcaaaacagcttatgtaaatcaataagtttttatgtatgattcataagcttgtcgaggtagttt 11163297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 14243792 - 14243847
Alignment:
Q  297 ttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctt 352  Q
    ||||||||||||||||||||| ||||| |||||| |||||  ||||||| ||||||    
T  14243792 ttggattgacttatttttgagattatgcaaaacagcttatgtaaataaataagctt 14243847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 358
Target Start/End: Complemental strand, 32964505 - 32964458
Alignment:
Q  311 ttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    ||||||||||||| |||||||| |||||||||||| ||||||| ||||    
T  32964505 ttttgagcttatgcaaaacaacgtattcaaataaataagcttttatgt 32964458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 479
Target Start/End: Complemental strand, 43268649 - 43268571
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacat-agcttaaaaataag 479  Q
    |||||||||| | |||| |||||||| ||||||| |   |||||||||||||||||||||||| ||| |||| |||||||||    
T  43268649 tatgaagatacaatttttgttagtgagaacttataa---attaacataaaagcttatttattttcataagctcaaaaataag 43268571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 7565397 - 7565323
Alignment:
Q  287 taaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    ||||| |||||||||||  |||||||| ||||| ||| ||||||||| || |||||||| | ||||| |||||||    
T  7565397 taaggcctgtttggattaccttattttagagctaatgcaaaacaactgatgcaaataaatatgcttttatgtatt 7565323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 15122512 - 15122578
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    |||||||||  |||||||| |||||||| ||||||||||||| |||| ||| ||| ||| |||||||    
T  15122512 gtttggattagcttattttagagcttatataaaacaacttatgcaaagaaataagtttttatgtatt 15122578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 15167697 - 15167663
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    ||||||||||||||||||||| |||||||||||||    
T  15167697 ttatgaattaacataaaagctaatttatttacata 15167663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Original strand, 15364104 - 15364138
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  15364104 ttatgaattaacataaaagcttatttatttgcata 15364138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 15710010 - 15709960
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||||  |||||||| |||||||| ||||||||||||| ||||||||    
T  15710010 gtttggattagcttattttagagcttatataaaacaacttatgcaaataaa 15709960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 29136809 - 29136775
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  29136809 ttatgaattaacataaaagcttatttatttgcata 29136775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Original strand, 35083342 - 35083376
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  35083342 ttatgaattaacataaaagcttatttatttgcata 35083376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 466
Target Start/End: Original strand, 35536881 - 35536981
Alignment:
Q  363 tcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    |||||||||| |||||||||||| | ||||||||   |||||||||| | ||||||||| ||| |||   ||||||| ||| ||||||||||||||||||    
T  35536881 tcataagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgttactgagaac---ttatgaa-taatataaaagcttatttattt 35536976  T
Q  462 acata 466  Q
     ||||    
T  35536977 gcata 35536981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 1943068 - 1943132
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||| | ||||| ||||||| |||||||   |||||| ||||||||||||||||||| ||||    
T  1943068 tatgaagatacaattttcattagtgagaacttat---gaattagcataaaagcttatttatttgcata 1943132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 466
Target Start/End: Original strand, 3977577 - 3977610
Alignment:
Q  433 tatgaattaacataaaagcttatttatttacata 466  Q
    ||||||||||||||||||||||||||||| ||||    
T  3977577 tatgaattaacataaaagcttatttatttgcata 3977610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 5559932 - 5559868
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||| | ||||||||||||| || ||||   ||||| |||||||||||||||||||| ||||    
T  5559932 tatgaagatacaattttcgttagtgagaatttat---gaatttacataaaagcttatttatttgcata 5559868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 465
Target Start/End: Complemental strand, 7364150 - 7364117
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacat 465  Q
    ||||||||||||||||||||||| ||||||||||    
T  7364150 ttatgaattaacataaaagcttaattatttacat 7364117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 461
Target Start/End: Complemental strand, 11163265 - 11163236
Alignment:
Q  432 ttatgaattaacataaaagcttatttattt 461  Q
    ||||||||||||||||||||||||||||||    
T  11163265 ttatgaattaacataaaagcttatttattt 11163236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 461
Target Start/End: Complemental strand, 11912176 - 11912056
Alignment:
Q  340 aataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatga 437  Q
    |||||| ||||||| ||||||| ||||||| ||| ||||  |||||| | |||||| |   |||||||||| | |||| |||||||| |||||||   ||    
T  11912176 aataaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgagaacttat---ga 11912080  T
Q  438 attaacataaaagcttatttattt 461  Q
    |||||||| |||||||||||||||    
T  11912079 attaacatgaaagcttatttattt 11912056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 17668368 - 17668417
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    ||||||||  |||||||| |||||||| ||||||||||||| ||||||||    
T  17668368 tttggattagcttattttagagcttatataaaacaacttatgcaaataaa 17668417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 461
Target Start/End: Original strand, 40697109 - 40697138
Alignment:
Q  432 ttatgaattaacataaaagcttatttattt 461  Q
    ||||||||||||||||||||||||||||||    
T  40697109 ttatgaattaacataaaagcttatttattt 40697138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 385
Target Start/End: Original strand, 2670057 - 2670133
Alignment:
Q  310 tttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgta-ttttcataagcttatcaagatagttt 385  Q
    |||||||||||||||||||||  |||| |||||||| || |||| ||||| | |||||||| || ||||| ||||||    
T  2670057 tttttgagcttatgtaaaacagtttatgcaaataaacaatcttttatgtactattcataagtttgtcaaggtagttt 2670133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 14244011 - 14243951
Alignment:
Q  285 tataaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||| |||| |||||||| |||||||||||||||||||| |||| | ||| | ||||||||    
T  14244011 tatagggtccgtttggatagacttatttttgagcttatgaaaaatagcttttgcaaataaa 14243951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 492
Target Start/End: Complemental strand, 28625507 - 28625459
Alignment:
Q  445 taaaagcttatttatttacata-gcttaaaaataagtcaatcaaaacgg 492  Q
    ||||||||||||||||| |||| ||| ||||||||||||||| ||||||    
T  28625507 taaaagcttatttatttgcataagctaaaaaataagtcaatccaaacgg 28625459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 40452529 - 40452426
Alignment:
Q  362 ttcataagcttatcaagatagtttctaaa-aaacaatgtatgaagatatagtttt-cgttagtgaaaacttattatgaattaacataaaagcttatttat 459  Q
    ||||||||||| ||||| |||||| | || |||||   |||||||||||| |||| ||||||||| |||||||   |||| ||||||| |||||||||||    
T  40452529 ttcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgagaacttat---gaataaacataatagcttatttat 40452433  T
Q  460 ttacata 466  Q
    || ||||    
T  40452432 ttgcata 40452426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 419
Target Start/End: Original strand, 41534628 - 41534716
Alignment:
Q  333 ttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt-ctaaaaaacaatgtatgaagatatagttttcgtt 419  Q
    |||| |||||||| ||||||| ||||||| ||||||||||| ||||| |||||| | ||||||||   |||||||||| | ||||||||    
T  41534628 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtt 41534716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 7e-35; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 30181517 - 30181687
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    ||||||||||||||||||||||||||||| || ||||||||  |||||||||||||||| ||||||| ||||||||||| ||||| |||||| | |||||    
T  30181517 gtttggattgacttatttttgagcttatgcaatacaacttaggcaaataaagaagcttttatgtattattcataagcttgtcaaggtagtttatcaaaaa 30181616  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||   ||||||||||  |||||| ||||||  |||   |||||||||||||||||||||||||||||| ||||    
T  30181617 acagcttatgaagatactgttttcattagtgggaac---ttatgaattaacataaaagcttatttatttgcata 30181687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 466
Target Start/End: Complemental strand, 29390669 - 29390500
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaaaa 393  Q
    |||||||||| |||||||||||| ||||| |||||||||||| |||||||| || |||| ||||||| ||||||||||| | ||| |||||| | |||||    
T  29390669 gtttggattggcttatttttgagtttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatgaaaaa 29390570  T
Q  394 caatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||  |||||||||| | ||||||||||  | ||    |||||||||||||||||||||||||||||| ||||    
T  29390569 caacttatgaagatacaattttcgttagctagaa---tttatgaattaacataaaagcttatttatttgcata 29390500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 34922898 - 34923070
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct---aaa 390  Q
    |||||||||| ||||||||| |||| | | |||||||||||| |||||||| ||||||| ||||||| |||||||| || ||||| |||||| |   |||    
T  34922898 gtttggattggcttatttttcagctaacgcaaaacaacttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaaa 34922997  T
Q  391 aaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||   | |||||||| | ||||||||||||| |||   ||||||| |||||||||||||||||||||| ||||    
T  34922998 aaacagcttgtgaagatacacttttcgttagtgagaac---ttatgaactaacataaaagcttatttatttgcata 34923070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 294 - 461
Target Start/End: Original strand, 38372524 - 38372690
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt-ctaaaa 391  Q
    |||||||||||||||||||||||||||||| |||||| ||||| |||||||| ||||| | ||||||| |||||||| || ||||| |||||| | ||||    
T  38372524 tgtttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaa 38372623  T
Q  392 aacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    | ||    | ||||| | | ||||||||||||| |||   ||||||||||||||||||||| ||||||||    
T  38372624 agcagctcaagaagaaacaattttcgttagtgagaac---ttatgaattaacataaaagctgatttattt 38372690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 466
Target Start/End: Original strand, 22032727 - 22032899
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaa 390  Q
    |||||||||||  |||||||| |||||||||||||||||||||| |||||||| | | ||| ||||||| || |||||| | | ||  |||||| | |||    
T  22032727 ctgtttggattagcttattttagagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaa 22032826  T
Q  391 aaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||||| ||||||| || | ||||||||||||| |||   |||| |||||| |||||| ||||||||||| ||||    
T  22032827 aaacaatttatgaaggtacaattttcgttagtgagaac---ttataaattaagataaaaacttatttatttgcata 22032899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 461
Target Start/End: Complemental strand, 14691366 - 14691253
Alignment:
Q  347 aagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaaca 444  Q
    ||||||| ||||||| ||||||||||| ||||  || ||| | |||||||||| |||||||||||| ||||||||||||| |||   |||||||||||||    
T  14691366 aagcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgagaac---ttatgaattaaca 14691270  T
Q  445 taaaagcttatttattt 461  Q
    |||||| ||||||||||    
T  14691269 taaaaggttatttattt 14691253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 293 - 385
Target Start/End: Complemental strand, 40629537 - 40629445
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    |||||||||||| |||||||||||||||||| |||||| ||||| |||||||| || |||| ||||||| ||||||||||| ||||| ||||||    
T  40629537 ctgtttggattggcttatttttgagcttatgcaaaacagcttatccaaataaataaacttt-atgtattattcataagcttgtcaaggtagttt 40629445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 22575553 - 22575723
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    ||||||||| ||||||||| |||||||||||||||| ||||| |||||||| | | ||| ||||||| || ||||| || | |||||| ||| | |||||    
T  22575553 gtttggattaacttattttagagcttatgtaaaacatcttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaaaa 22575652  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||| | |||||||||| | ||||||||||| | | |   |||| |||||| |||||| ||||||||| ||||||    
T  22575653 acagtttatgaagatacaattttcgttagtaagagc---ttataaattaaaataaaaacttatttatctacata 22575723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 399 - 461
Target Start/End: Complemental strand, 33288088 - 33288029
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    |||||||||| |||||||||||||||||||   |||||||||||||||||| |||||||||||    
T  33288088 tatgaagatacagttttcgttagtgaaaac---ttatgaattaacataaaaacttatttattt 33288029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 466
Target Start/End: Complemental strand, 16933048 - 16932879
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    |||||||||  ||||||||||||||||| ||||| ||||||| ||| |||| ||  ||| ||||||| || ||||| || | ||| |||||| | |||||    
T  16933048 gtttggattagcttatttttgagcttatataaaataacttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaa 16932950  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    || || |||||||||| | ||||||||||| ||| ||||| |   ||||| |||||||||||||||| ||||||    
T  16932949 accatttatgaagatacaattttcgttagtaaaagcttataa---attaaaataaaagcttatttatatacata 16932879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 466
Target Start/End: Complemental strand, 16938431 - 16938262
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    |||||||||  ||||||||||||||||| ||||| ||||||| ||| |||| ||  ||| ||||||| || ||||| || | ||| |||||| | |||||    
T  16938431 gtttggattagcttatttttgagcttatataaaataacttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaa 16938333  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    || || |||||||||| | ||||||||||| ||| ||||| |   ||||| |||||||||||||||| ||||||    
T  16938332 accatttatgaagatacaattttcgttagtaaaagcttataa---attaaaataaaagcttatttatatacata 16938262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 16958783 - 16958952
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    |||||||||  ||||||||||||||||| ||||||||||||| ||| |||| ||  ||| ||||||| || ||||| || | ||| |||||| | |||||    
T  16958783 gtttggattagcttatttttgagcttatataaaacaacttatgcaactaaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaa 16958881  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||  | |||||||||| | ||||||||||| ||| |   |||| |||||| |||||||||||||||| ||||||    
T  16958882 accgtttatgaagatacaattttcgttagtaaaagc---ttataaattaaaataaaagcttatttatatacata 16958952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 358
Target Start/End: Original strand, 6406779 - 6406840
Alignment:
Q  297 ttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    ||||||||||||||||||||||||||| |||| ||||||| |||||||| ||| ||| ||||    
T  6406779 ttggattgacttatttttgagcttatgaaaaataacttatacaaataaataagattttatgt 6406840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 29390459 - 29390524
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    ||||||||||||||||||||||||||||||| |||| |  |||| |||||||| ||||||| ||||    
T  29390459 ctgtttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaataagcttttatgt 29390524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 466
Target Start/End: Complemental strand, 44613574 - 44613422
Alignment:
Q  313 ttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatata 410  Q
    ||||||||||| |||||| ||||| |||||||| ||||||| || |||| ||||||||||| | ||| |||||| | |||||||||  ||||| |||| |    
T  44613574 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacgataca 44613475  T
Q  411 gttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
     ||||  ||| | | |||   ||||||||||| |||||||||||||||||| ||||    
T  44613474 atttttattaattagaac---ttatgaattaatataaaagcttatttatttgcata 44613422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 466
Target Start/End: Original strand, 35809052 - 35809227
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct- 387  Q
    |||| |||||||||| |||||||| ||||||||  ||| || ||||| |||||||| |||| |||||||||| || |||||||| | ||  |||||| |     
T  35809052 ggtccgtttggattggcttattttagagcttatacaaagcatcttatgcaaataaataagcattaatgtattatttataagcttgttaacgtagtttatg 35809151  T
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||  || ||| ||| | ||||||  ||| | |   | ||||||||||||||||||||||| |||||||||||    
T  35809152 aaaaaacaacttaagaatatacaattttcgccagtaaga---ttttatgaattaacataaaagcttaattatttacata 35809227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 18837189 - 18837267
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagctt 372  Q
    |||||||||| |||||||||||||||||| |||||| | ||| |||||||| ||||||   |||||| |||||||||||    
T  18837189 gtttggattggcttatttttgagcttatgcaaaacagcatatgcaaataaataagcttatgtgtattattcataagctt 18837267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 24371525 - 24371459
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    |||||||||  |||||||| |||||||| ||||||| ||||| |||||||| ||| |||||||||||    
T  24371525 gtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagttttaatgtatt 24371459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 466
Target Start/End: Original strand, 29378649 - 29378782
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| |||||||| ||||||| ||||||| || || || || ||||| |||||| | ||||||||   |||||||||| | ||||||||||| | ||||    
T  29378649 cttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtaagaact 29378748  T
Q  430 tattatgaattaacataaaagcttatttatttacata 466  Q
    |||   |||||||| ||||||||||||||||| ||||    
T  29378749 tat---gaattaacgtaaaagcttatttatttgcata 29378782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 29378821 - 29378763
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||||||||||||||||||||| ||||| |||| | ||||| |||||||| |||||||    
T  29378821 gtttggattgacttatttttgagtttatgaaaaatagcttatgcaaataaataagcttt 29378763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 20888750 - 20888701
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataa 344  Q
    ||||||||| ||||||||||||||||||| |||| ||||||| |||||||    
T  20888750 gtttggatttacttatttttgagcttatgaaaaataacttatgcaaataa 20888701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 46744026 - 46744090
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||| | ||||||||||||| ||||||    |||||||||||||||||||||||||| ||||    
T  46744026 tatgaagatacaattttcgttagtgagaacttac---gaattaacataaaagcttatttattttcata 46744090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 415
Target Start/End: Original strand, 14536857 - 14536971
Alignment:
Q  302 ttgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgt 399  Q
    |||||||||||||||  ||||  ||||||||||||  ||||||| ||  ||| ||||||| |||||||| || |||||||||||| | |||||||| | |    
T  14536857 ttgacttatttttgaatttattaaaaacaacttatagaaataaataa-tttttatgtattattcataagattgtcaagatagtttatgaaaaaacacttt 14536955  T
Q  400 atgaagatatagtttt 415  Q
    ||||||||||| ||||    
T  14536956 atgaagatatattttt 14536971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 19496324 - 19496375
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||| |||||||| |||||||||||||  |||||||||||| ||||||||    
T  19496324 tgtttgaattgacttctttttgagcttatacaaaacaacttatacaaataaa 19496375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 26331777 - 26331836
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||||||||||||||| |||||||||||| |||| | |||||  ||||||| |||||||    
T  26331777 tgtttggattgacttatgtttgagcttatgcaaaatagcttatgtaaataaataagcttt 26331836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 35246639 - 35246807
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaaaa 393  Q
    |||||||||  |||||||| |||| ||| ||||||||||||| |||||||| ||| ||| ||||||| || | ||| || | ||| |||||| | |||||    
T  35246639 gtttggattagcttattttagagcctatataaaacaacttatgcaaataaataagtttttatgtattatttaaaag-tttttaaggtagtttatgaaaaa 35246737  T
Q  394 caatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacatag 467  Q
     | | ||||| |||| | |||||||||||||   |   |||| |||||| ||||||||||||||||||||||||    
T  35246738 -actttatgaggatacaattttcgttagtgagggc---ttataaattaaaataaaagcttatttatttacatag 35246807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 48949782 - 48949863
Alignment:
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttat---tatgaattaacataaaagcttatttatttacata 466  Q
    |||||||| | |||||||||||| | ||||||||||||  |||||   ||| |||||| |||||| ||||||||||||||||    
T  48949782 aaaaaacagtttatgaagatataatattcgttagtgaaggcttataaatataaattaaaataaaaacttatttatttacata 48949863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 323
Target Start/End: Original strand, 23119848 - 23119878
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatg 323  Q
    |||||||||||||||||||||||||||||||    
T  23119848 ctgtttggattgacttatttttgagcttatg 23119878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Original strand, 26331868 - 26331902
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  26331868 ttatgaattaacataaaagcttatttatttgcata 26331902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Original strand, 33204937 - 33204971
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  33204937 ttatgaattaacataaaagcttatttatttgcata 33204971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 35331109 - 35331159
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||||||||||||||  |||||||| |||||| ||||| ||||||||    
T  35331109 gtttggattgacttattttgtagcttatgcaaaacagcttatgcaaataaa 35331159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 432
Target Start/End: Complemental strand, 48021750 - 48021628
Alignment:
Q  311 ttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaaaacaatgtatgaagatat 409  Q
    ||||||||||||  ||||||| |||| |||||||| ||||| | || |||| ||||||||||| | ||  |||||| | ||||| ||   |||||||||     
T  48021750 ttttgagcttatacaaaacaatttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttatgaaaaataactaatgaagatac 48021651  T
Q  410 agttttcgttagtgaaaacttat 432  Q
    | ||||| |||||||||||||||    
T  48021650 aattttcattagtgaaaacttat 48021628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 461
Target Start/End: Original strand, 1401176 - 1401205
Alignment:
Q  432 ttatgaattaacataaaagcttatttattt 461  Q
    ||||||||||||||||||||||||||||||    
T  1401176 ttatgaattaacataaaagcttatttattt 1401205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 466
Target Start/End: Complemental strand, 23356473 - 23356440
Alignment:
Q  433 tatgaattaacataaaagcttatttatttacata 466  Q
    ||||||||||||||||||||||||||| ||||||    
T  23356473 tatgaattaacataaaagcttatttatatacata 23356440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 466
Target Start/End: Complemental strand, 47654535 - 47654363
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttc-ataagcttatcaagatagtttct-aaa 390  Q
    |||||||||||  |||||||| |||||| || |||||| |||||  ||||||| | ||  | ||||||| |  |||||||| | ||  |||||| | |||    
T  47654535 ctgtttggattagcttattttagagcttttgcaaaacagcttatgtaaataaatatgccctgatgtattatatataagcttgttaatgtagtttatgaaa 47654436  T
Q  391 aaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||| | ||||||| || | ||||||||||||| |||||||   ||||||| |||||| ||||||||||| ||||    
T  47654435 aaacagtttatgaaggtacaattttcgttagtgagaacttat---gaattaagataaaaacttatttatttgcata 47654363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 19914018 - 19914082
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||| ||| ||||||||||| ||| ||||| ||  ||||| |||||||||||||||||||||||    
T  19914018 tatgaagagataattttcgttagtaaaagcttat-at--attaaaataaaagcttatttatttacata 19914082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 33287984 - 33288048
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    ||||||||||| |||||||||||||||||| |||  | ||||| |||||||| ||| ||| ||||    
T  33287984 tgtttggattggcttatttttgagcttatgaaaactagcttatccaaataaataagtttttatgt 33288048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 489
Target Start/End: Original strand, 33288155 - 33288203
Alignment:
Q  442 acataaaagcttatttatttacat-agcttaaaaataagtcaatcaaaa 489  Q
    |||||||||||||||||||| ||| |||| ||||||| |||||||||||    
T  33288155 acataaaagcttatttatttgcataagctcaaaaatatgtcaatcaaaa 33288203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 461
Target Start/End: Original strand, 39279534 - 39279562
Alignment:
Q  433 tatgaattaacataaaagcttatttattt 461  Q
    |||||||||||||||||||||||||||||    
T  39279534 tatgaattaacataaaagcttatttattt 39279562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 295 - 461
Target Start/End: Complemental strand, 18424396 - 18424232
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaaaa 393  Q
    ||||| |||||| |||||||||||||||| ||||||| |||| |||||||| ||||||| ||||||| ||||||| ||| | ||| |||||| | |||||    
T  18424396 gtttgaattgacatatttttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataaacttgtgaaggtagtttatgaaaaa 18424297  T
Q  394 caatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    |||| |||||||||| | |||| |||| |||||||   ||||||||||||||||||||||||||||||    
T  18424296 caatttatgaagatacaatttttgttattgaaaac---ttatgaattaacataaaagcttatttattt 18424232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 293 - 466
Target Start/End: Complemental strand, 42611989 - 42611818
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttta-atgtatt-ttcataagcttatcaagatagtttct-aa 389  Q
    |||||||||||| ||||||||| |||||||| |||||||||||| |||||||| |||||||| ||||||| ||||||||||| || || |||||| | ||    
T  42611989 ctgtttggattggcttattttttagcttatgcaaaacaacttatgcaaataaataagctttatatgtattattcataagcttgtcgag-tagtttatgaa 42611891  T
Q  390 aaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||  |||||||||| |||||||| |||||| |||   |||||||||||||||||||||||||||||| ||||    
T  42611890 aaaacaacttatgaagatacagttttcg-tagtgacaac---ttatgaattaacataaaagcttatttatttgcata 42611818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 291 - 466
Target Start/End: Complemental strand, 43415412 - 43415237
Alignment:
Q  291 gtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt-cta 388  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| | |||||||| ||| ||| ||||||| |||||||| || | ||  |||||| | |    
T  43415412 gtctgtttgaattgacttatttttgagcttaagtaaaacaacttctgcaaataaataagtttttatgtattattcataaggttgttaatgtagtttacga 43415313  T
Q  389 aaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||||||| ||| |||||||| | || |||||||||||    ||||||||||||||||||  |||||||||||||||    
T  43415312 aaaaacaatttatcaagatataatatttgttagtgaaaa--acttatgaattaacataaaaatttatttatttacata 43415237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 293 - 466
Target Start/End: Original strand, 29877604 - 29877776
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaa 390  Q
    |||||||||||| |||||||||||||||||| ||||||| |||| |||||||| ||||||| ||||||| |||||||||||   ||| |||||| | |||    
T  29877604 ctgtttggattggcttatttttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataagcttgctaaggtagtttatgaaa 29877703  T
Q  391 aaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    || ||   |||||||||| | |||| |||||||| |||   |||||||||||||||||||||||| ||||| ||||    
T  29877704 aagcagcttatgaagatacaatttttgttagtgagaac---ttatgaattaacataaaagcttatatatttgcata 29877776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 466
Target Start/End: Complemental strand, 38345945 - 38345771
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgta-ttttcataagcttatcaagatagtttct- 387  Q
    |||| |||||||||||||||| |||||||||||| |||||| ||||| |||||||| ||||||| ||||| | |||||||| || ||||  |||||| |     
T  38345945 ggtccgtttggattgacttatgtttgagcttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataag-ttgtcaaagtagtttatg 38345847  T
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||  |||||||||| | ||||  ||||  | |||   |||||||||||||||||||||||||||||||||||    
T  38345846 aaaaaacaacttatgaagatacaatttttattagccagaac---ttatgaattaacataaaagcttatttatttacata 38345771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 293 - 466
Target Start/End: Original strand, 23297403 - 23297572
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaa 391  Q
    |||||||||||| |||||||||||||||||| |||| | ||||| |||||||| ||||||| ||||||| |||||||| || ||||| |||||  ||  |    
T  23297403 ctgtttggattggcttatttttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtt--tatga 23297500  T
Q  392 aacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||   |||||||||| | |||| ||||| || |||   |||||||||| ||||||||||||||||||| ||||    
T  23297501 aacagcttatgaagatacaatttttgttagcgagaac---ttatgaattagcataaaagcttatttatttgcata 23297572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 296 - 466
Target Start/End: Original strand, 35405653 - 35405820
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaa 393  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||  ||| ||| ||||||| | | ||| ||| |||||| ||||| | ||||||    
T  35405653 tttggattgacttatttttgagcttatgcaaaacaacttatacaaataactaagattt-atgtattatacttaatcttgtcaagacagtttatgaaaaaa 35405751  T
Q  394 caatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||   |||||||||| | ||||||||||| || || ||||   ||||||||||||||||||||||||| ||||    
T  35405752 cagcttatgaagatagaattttcgttagt-aagacctatt---aattaacataaaagcttatttatttgcata 35405820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 377
Target Start/End: Complemental strand, 43699602 - 43699519
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaa 377  Q
    |||||||||| |||||||||||||||||| |||||||||||| |||||||| ||||||| |||| || ||||||||||| ||||    
T  43699602 gtttggattggcttatttttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaa 43699519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 490
Target Start/End: Original strand, 40699326 - 40699522
Alignment:
Q  298 tggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatttt-cataagcttatcaagatagtttct-aaaaaaca 395  Q
    ||||||| |||||| ||||||||||| |||||| ||||| |||||||| ||  ||| ||||| |   ||||||||| ||||| |||||| | ||||||||    
T  40699326 tggattggcttattattgagcttatgcaaaacagcttatgcaaataaataaatttttatgtagtgcgcataagcttgtcaaggtagtttatgaaaaaaca 40699425  T
Q  396 atg----tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacat-agcttaaaaataagtcaatcaaaac 490  Q
    |      |||||||||| ||||||||| ||||| |||||||   |||||||||||||| ||||||| ||| ||| |||| |||||||||| |||||||||    
T  40699426 aacatcttatgaagatacagttttcgtaagtgagaacttat---gaattaacataaaatcttatttgtttgcataagctcaaaaataagttaatcaaaac 40699522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 296 - 385
Target Start/End: Original strand, 35124355 - 35124445
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgta-ttttcataagcttatcaagatagttt 385  Q
    |||||||||||||||||||||||||||| |||||| ||||| |||||| | || |||| ||||| | ||||||||||| ||||| ||||||    
T  35124355 tttggattgacttatttttgagcttatgcaaaacagcttatgcaaatatataaccttttatgtactattcataagcttgtcaaggtagttt 35124445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 466
Target Start/End: Original strand, 28074369 - 28074501
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaaaacaatgtatgaagatatagttttcgttagtgaaaactt 430  Q
    ||||| |||||||| ||||||| ||||||| ||||||||||| ||||| |||||| | ||||| |   |||||||||| | |||||||||| ||||||      
T  28074369 cttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaagcttatgaagatacaattttcgttagcgaaaac-- 28074466  T
Q  431 attatgaattaacataaaagcttatttatttacata 466  Q
     || |||| |||||||||| ||||||||||| ||||    
T  28074467 -ttgtgaaataacataaaatcttatttatttgcata 28074501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 396
Target Start/End: Original strand, 3564182 - 3564289
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttcta 388  Q
    |||| |||||||||||||| |||||||||||||| |||||| |||||  ||||||| || |||| || |||| |||||||| || ||||| |||||| |     
T  3564182 ggtccgtttggattgacttgtttttgagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatg 3564281  T
Q  389 aaaaacaa 396  Q
    ||||||||    
T  3564282 aaaaacaa 3564289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 432 - 490
Target Start/End: Original strand, 34633493 - 34633552
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacat-agcttaaaaataagtcaatcaaaac 490  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||||||||| ||||    
T  34633493 ttatgaattaacataaaagcttatttatttgcgtaagcttaaaaataagtcaatccaaac 34633552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 466
Target Start/End: Complemental strand, 52700667 - 52700492
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct- 387  Q
    |||| ||||||||||||||||||| ||||||||| ||| ||||||||  ||||||| |||  || ||||||| || |||||||| | ||  | |||| |     
T  52700667 ggtccgtttggattgacttattttagagcttatgcaaa-caacttatgtaaataaataagtctttatgtattatttataagcttgtaaaagtggtttatg 52700569  T
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||| | | ||||||||||   ||||||||||| | ||||||| |  |||||||||||||| |||||||||||||||    
T  52700568 aaaaaatagtttatgaagatacgattttcgttagtaagaacttataa--aattaacataaaagattatttatttacata 52700492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 332 - 466
Target Start/End: Original strand, 896974 - 897107
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| |||||||| || |||| ||||||| ||||||||||| ||||  |||||| | |||||||||| || | |||||   ||||||||||||||||||    
T  896974 cttatgcaaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaaaact 897073  T
Q  430 tattatgaattaacataaaagcttatttatttacata 466  Q
    ||| |   ||||| |||||||||||||||||| ||||    
T  897074 tataa---attaatataaaagcttatttatttgcata 897107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 18630908 - 18630844
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||| ||||||||||||||| |||||||   ||||||| |||||||||||||||||| ||||    
T  18630908 tatgaagataaagttttcgttagtgagaacttat---gaattaatataaaagcttatttatttgcata 18630844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 17223006 - 17222942
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    ||||||||||| |||||||||||||||||| |||| | |||||||||||||| ||| ||| ||||    
T  17223006 tgtttggattggcttatttttgagcttatgaaaaatagcttattcaaataaataagtttttatgt 17222942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 43136730 - 43136694
Alignment:
Q  287 taaggtctgtttggattgacttatttttgagcttatg 323  Q
    |||||||||||||||||||||||||||||||||||||    
T  43136730 taaggtctgtttggattgacttatttttgagcttatg 43136694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 3564382 - 3564319
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    ||||||||||||||||||||||||||||| |||| | ||||| |||||||| || |||| ||||    
T  3564382 gtttggattgacttatttttgagcttatgaaaaatagcttatgcaaataaataatcttttatgt 3564319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 466
Target Start/End: Original strand, 31022375 - 31022537
Alignment:
Q  301 attgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttcataagcttatcaagatagtttctaaaaaacaatgta 400  Q
    |||| |||||||||||||||||| |||||| || || |||||||| ||| ||| |||| |||| ||||||||  |||  | |||   ||||||||   ||    
T  31022375 attgtcttatttttgagcttatgcaaaacatctcatgcaaataaataagtttttatgtttttttataagcttcacaaagttgttatgaaaaaacagctta 31022474  T
Q  401 tgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    | |||||| | ||||||| |||||||||   |||||||||||  |||| |||||||||||| ||||    
T  31022475 taaagatacaattttcgtcagtgaaaac---ttatgaattaaggtaaatgcttatttatttgcata 31022537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 34633366 - 34633429
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||| ||||||||| |||||||| |||||||||||| |||||||| || |||| ||||    
T  34633366 gtttggattggcttattttttagcttatgcaaaacaacttatgcaaataaataaacttttatgt 34633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 42153072 - 42153135
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||| |||||||||||||||| |||||| | ||||| |||||||| ||||||| ||||    
T  42153072 gtttggattggcttatttttgagcttacgtaaaatagcttatgcaaataaataagcttttatgt 42153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 466
Target Start/End: Complemental strand, 42617348 - 42617179
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    |||||||||  |||||||| ||||||||  |||||| ||||| |||||||| | | ||| | ||||| || ||||| || | ||| |||||| | |||||    
T  42617348 gtttggattagcttattttagagcttatacaaaacagcttatgcaaataaatacgtttttaagtattatttataagttttt-aaggtagtttatgaaaaa 42617250  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    | | | |||||||||||  |||||||||||||||||   |||| |||||| |||||| ||||||||||||||||    
T  42617249 atagtttatgaagatatgattttcgttagtgaaaac---ttataaattaaaataaaaacttatttatttacata 42617179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 385
Target Start/End: Complemental strand, 1374481 - 1374391
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtat-tttcataagcttatcaagatagttt 385  Q
    ||||||||| |||||||||||||||||| |||| ||||||| |||||||| ||| ||| ||| ||  ||||||||||| ||| | ||||||    
T  1374481 tttggattggcttatttttgagcttatgcaaaaaaacttatgcaaataaaaaagtttttatgcatgattcataagcttgtcatggtagttt 1374391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 466
Target Start/End: Original strand, 7148776 - 7148909
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| |||||||| ||||||| ||||||| ||||||||||| ||||| |||||| | ||||||||   ||| || ||| | ||||| ||||| | |||     
T  7148776 cttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagtcagaac- 7148874  T
Q  430 tattatgaattaacataaaagcttatttatttacata 466  Q
      |||||||||| ||||||||||||||||||| ||||    
T  7148875 --ttatgaattagcataaaagcttatttatttgcata 7148909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 461
Target Start/End: Original strand, 17222864 - 17222961
Alignment:
Q  362 ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatt 460  Q
    ||||||||||| ||||| |||||| | ||||||||   |||||||||| | ||||||||||| | |||||||   |||||||||||||| ||||||||||    
T  17222864 ttcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagttagaacttat---gaattaacataaaaacttatttatt 17222960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 466
Target Start/End: Complemental strand, 48591506 - 48591373
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| |||||||| ||| ||| || |||| |||||| |||| ||||| |||||| | ||||||||   |||||||||| | ||||||||| ||| ||||    
T  48591506 cttatgcaaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaact 48591407  T
Q  430 tattatgaattaacataaaagcttatttatttacata 466  Q
    |||   |||||||| ||||||||||||||||| ||||    
T  48591406 tat---gaattaacgtaaaagcttatttatttgcata 48591373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 54593696 - 54593658
Alignment:
Q  298 tggattgacttatttttgagcttatgtaaaacaacttat 336  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  54593696 tggattgacttatttttgagcttatgaaaaacaacttat 54593658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 290 - 323
Target Start/End: Complemental strand, 948256 - 948223
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatg 323  Q
    ||||||||||||||||||||||||||||||||||    
T  948256 ggtctgtttggattgacttatttttgagcttatg 948223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 9153701 - 9153660
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttat 336  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  9153701 gtttggattgacttattttagagcttatgcaaaacaacttat 9153660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 12022988 - 12023029
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttat 336  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  12022988 gtttggattgacttattttagagcttatgcaaaacaacttat 12023029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 22273761 - 22273818
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    |||||||||||||||||||||||||||| | || | ||||| |||||||| |||||||    
T  22273761 tttggattgacttatttttgagcttatgcataatagcttatgcaaataaataagcttt 22273818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 369
Target Start/End: Complemental strand, 29996760 - 29996683
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataag 369  Q
    |||||||| |||||||||||||||| || || ||||||| |||| |||||||| ||||||| || |||| ||||||||    
T  29996760 ctgtttggtttgacttatttttgagtttttgcaaaacaatttatgcaaataaataagcttttatatattattcataag 29996683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 432
Target Start/End: Complemental strand, 46704370 - 46704250
Alignment:
Q  313 ttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatata 410  Q
    |||||||||||||||||||||||| ||||| || ||||||| || |||| ||||| ||||| | ||| |||||| | ||||||||   |||||||||| |    
T  46704370 ttgagcttatgtaaaacaacttatgcaaat-aataagcttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaa 46704272  T
Q  411 gttttcgttagtgaaaacttat 432  Q
     ||||| ||||||| |||||||    
T  46704271 attttcattagtgagaacttat 46704250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 48591335 - 48591392
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||||||| |||||||||||||||||| |||| | ||||| |||||||| |||||||    
T  48591335 tttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttt 48591392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 432
Target Start/End: Complemental strand, 7206705 - 7206566
Alignment:
Q  295 gtttggattga-cttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaa 391  Q
    ||||||||||| |||||||| ||||||||| | |||| ||||| ||||| || ||||||| || |||| ||||  ||| | | ||| |||||| | ||||    
T  7206705 gtttggattgagcttatttt-gagcttatgcagaacagcttatgcaaatgaataagcttttatttattattcacgagcctgttaaggtagtttatgaaaa 7206607  T
Q  392 aacaatgtatgaagatatagttttcgttagtgaaaacttat 432  Q
    |||||  |||||||||| ||||||||||||||| |||||||    
T  7206606 aacaacttatgaagataaagttttcgttagtgagaacttat 7206566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 492
Target Start/End: Original strand, 9319156 - 9319212
Alignment:
Q  437 aattaacataaaagcttatttatttacat-agcttaaaaataagtcaatcaaaacgg 492  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||| | ||||||    
T  9319156 aattaacataaaagcttatttatttacataagctaaaaaataagccaaaccaaacgg 9319212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 461
Target Start/End: Original strand, 48721893 - 48721952
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    |||||||||||| |||| |||||||| |||||||   ||||||| ||||||||||||||||||    
T  48721893 tatgaagatataatttttgttagtgagaacttat---gaattaatataaaagcttatttattt 48721952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 410
Target Start/End: Complemental strand, 213048 - 212950
Alignment:
Q  313 ttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatata 410  Q
    ||||||||||| |||||||||||| |||||||| ||| ||| || |||| ||||||||||| | ||| |||||| | |||||||||  ||||||||||||    
T  213048 ttgagcttatgcaaaacaacttatgcaaataaataag-ttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagatata 212950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 492
Target Start/End: Original strand, 825756 - 825846
Alignment:
Q  400 atgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacat-agcttaaaaataagtcaatcaaaacgg 492  Q
    ||||||||| | |||| |||||||||| |||||   |||||||||||||| ||||||||||| ||| |||| |||||| || ||||| ||||||    
T  825756 atgaagatacattttttgttagtgaaagcttat---gaattaacataaaatcttatttatttgcataagctaaaaaattagccaatccaaacgg 825846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 432
Target Start/End: Original strand, 18258021 - 18258115
Alignment:
Q  338 caaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaaaacaatgtatgaagatatagttttcgttagtgaaaacttat 432  Q
    |||||||| ||| |||| |||||| ||||||| |||||||||||  ||| | ||||||||  ||||||| || | |||||||||||||||||||||    
T  18258021 caaataaataagtttta-tgtattattcataaacttatcaagatgttttttgaaaaacaacttatgaagttacaattttcgttagtgaaaacttat 18258115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 27368255 - 27368196
Alignment:
Q  311 ttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataag 369  Q
    |||||| ||||||||||||||||||| |||||||| ||||||| || |||| ||||||||    
T  27368255 ttttgaacttatgtaaaacaacttatgcaaataaataagcttttatatattattcataag 27368196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 461
Target Start/End: Original strand, 36298394 - 36298464
Alignment:
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    |||||||||| |||||||||| | |||| |||| |||||||   ||||||||||| ||||||| ||||||||||    
T  36298394 aaaaaacaatttatgaagataaattttttgttaatgaaaac---ttatgaattaatataaaagtttatttattt 36298464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 36741081 - 36741022
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||||||||| ||||||||| |||||||| |||| | ||||| |||||||| |||||||    
T  36741081 tgtttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttt 36741022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 433
Target Start/End: Complemental strand, 52274202 - 52274099
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt-ctaaaaaacaatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| |||||||| || |||| ||||||| || |||||||||||||| |||||| | ||||||||   |||||||||| | ||||||| ||||| ||||    
T  52274202 cttatgcaaataaataaacttttatgtattattgataagcttatcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtcagtgagaact 52274103  T
Q  430 tatt 433  Q
    ||||    
T  52274102 tatt 52274099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 488367 - 488333
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  488367 ttatgaattaacataaaagcttatttatttccata 488333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Original strand, 4331433 - 4331467
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||| ||||||||||||||||    
T  4331433 ttatgaattaacataaaaacttatttatttacata 4331467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 7148947 - 7148890
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    |||||||||||||||||| |||||||||| |||| | ||||| |||||||| |||||||    
T  7148947 gtttggattgacttatttctgagcttatg-aaaatagcttatgcaaataaataagcttt 7148890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 11256644 - 11256610
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  11256644 ttatgaattaacataaaagcttatttatttgcata 11256610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 22117321 - 22117371
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||||  |||||||| |||||||| ||||||||||||| ||||||||    
T  22117321 gtttggattagcttattttagagcttatataaaacaacttatgcaaataaa 22117371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 22823763 - 22823813
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||||  |||||||| |||||||| ||||||||||||| ||||||||    
T  22823763 gtttggattagcttattttagagcttatataaaacaacttatgcaaataaa 22823813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 34526320 - 34526286
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  34526320 ttatgaattaacataaaagcttatttatttgcata 34526286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Original strand, 48667773 - 48667807
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  48667773 ttatgaattaacataaaagcttatttatttgcata 48667807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 8601274 - 8601338
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||| | |||| |||||||||||   ||||| ||||||||| ||||||||||||||| ||||    
T  8601274 tatgaagatacaatttttgttagtgaaaa---attataaattaacattaaagcttatttatttgcata 8601338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 485
Target Start/End: Original strand, 10046340 - 10046389
Alignment:
Q  437 aattaacataaaagcttatttatttacat-agcttaaaaataagtcaatc 485  Q
    |||||||||||||||||| |||||||||| |||| |||||||||| ||||    
T  10046340 aattaacataaaagcttaattatttacataagctcaaaaataagttaatc 10046389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 323
Target Start/End: Original strand, 28663404 - 28663437
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatg 323  Q
    |||| |||||||||||||||||||||||||||||    
T  28663404 ggtccgtttggattgacttatttttgagcttatg 28663437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 466
Target Start/End: Original strand, 41228888 - 41229040
Alignment:
Q  313 ttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatata 410  Q
    ||||||||||| |||||| ||||| ||  |||| | ||||| || |||| ||||||||||| | ||| |||||| | |||||||||   ||||||||| |    
T  41228888 ttgagcttatgcaaaacagcttatgcaggtaaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaagataca 41228987  T
Q  411 gttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
     ||||| ||||| | |||||||   ||||||| ||||||||| |||||||| ||||    
T  41228988 attttcattagttagaacttat---gaattaatataaaagctaatttatttgcata 41229040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 1374292 - 1374356
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgta 359  Q
    ||||||||||| |||||||||||||||||  ||| ||||||| ||| |||  ||||||| |||||    
T  1374292 gtttggattgaattatttttgagcttatgagaaataacttatgcaagtaattaagcttttatgta 1374356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 9319039 - 9319087
Alignment:
Q  311 ttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgta 359  Q
    ||||||||||||| |||||||||||| |||||||| ||| ||| |||||    
T  9319039 ttttgagcttatgcaaaacaacttatacaaataaataagtttttatgta 9319087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 10795038 - 10794962
Alignment:
Q  285 tataaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    |||| |||| ||||| ||||||||||||| ||||||||| |||||| ||| |  ||||||| ||| ||| |||||||    
T  10795038 tatagggtccgtttgaattgacttattttagagcttatgcaaaacagcttgtgtaaataaataagtttttatgtatt 10794962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 12495549 - 12495617
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||| |||||||||| |||||||||||||||||| |||  | ||||| |||||||| ||| ||| ||||    
T  12495549 ggtccgtttggattgtcttatttttgagcttatgaaaagtagcttatgcaaataaataagtttttatgt 12495617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 18258178 - 18258130
Alignment:
Q  297 ttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||| |||||||||||||||||  |||| ||||||| ||||||||    
T  18258178 ttggattgtcttatttttgagcttatagaaaataacttatacaaataaa 18258130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 493
Target Start/End: Complemental strand, 28663458 - 28663406
Alignment:
Q  442 acataaaagcttatttatttacata-gcttaaaaataagtcaatcaaaacgga 493  Q
    ||||||||||| |||||||| |||| ||| ||||||||||||||| |||||||    
T  28663458 acataaaagctcatttatttgcataagctcaaaaataagtcaatccaaacgga 28663406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 328
Target Start/End: Complemental strand, 28663747 - 28663715
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaa 328  Q
    |||||||||||||||||||||||||||| ||||    
T  28663747 tttggattgacttatttttgagcttatgaaaaa 28663715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 459
Target Start/End: Complemental strand, 36255087 - 36254992
Alignment:
Q  362 ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttat 459  Q
    ||||||||||| ||||  |||||| | ||||||||   |||||||||| | ||||  ||||||| |||||||   ||||||||||||||||||||||||    
T  36255087 ttcataagcttgtcaacgtagtttgtgaaaaaacagcttatgaagatacaattttaattagtgagaacttat---gaattaacataaaagcttatttat 36254992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 466
Target Start/End: Complemental strand, 42153143 - 42153111
Alignment:
Q  434 atgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||| ||||    
T  42153143 atgaattaacataaaagcttatttatttgcata 42153111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 48687111 - 48687060
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||||||| |||||||||||||||||| |||| | ||||| ||||||||    
T  48687111 ctgtttggattgccttatttttgagcttatg-aaaatagcttatgcaaataaa 48687060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 1e-30; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 466
Target Start/End: Complemental strand, 40581191 - 40581025
Alignment:
Q  300 gattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct--aaaaaacaa 396  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||| ||||||| ||||||| || |||||||| ||||| |||||| |  ||||||||     
T  40581191 gattgacttatctttgagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacag 40581092  T
Q  397 tgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
     ||||||||| | | ||||||||||||| |||   |||||||||||||||||| ||||||||||| ||||    
T  40581091 cgtatgaagaaacaattttcgttagtgagaac---ttatgaattaacataaaatcttatttatttgcata 40581025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 296 - 457
Target Start/End: Complemental strand, 53218158 - 53217998
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaa 393  Q
    ||||||||||||||||||| |||||||| |||||||||||| | |||||| ||| ||| ||||||| ||||||||||| ||||| |||||| | ||||||    
T  53218158 tttggattgacttattttttagcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 53218059  T
Q  394 caatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttattt 457  Q
    |||  | |||||||| | ||||||||||||| |||   |||| |||||| ||||||||||||||    
T  53218058 caacttttgaagatacaattttcgttagtgagaac---ttataaattaaaataaaagcttattt 53217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 293 - 420
Target Start/End: Original strand, 29270326 - 29270455
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaa 390  Q
    ||||||||||||||||||||||||||||||| ||||||||||||   |||||| ||||||| ||||||| ||||||||||| |||||||| ||| | |||    
T  29270326 ctgtttggattgacttatttttgagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagcttttcaagataatttatgaaa 29270425  T
Q  391 aaacaatgtatgaagatatagttttcgtta 420  Q
    |||||   |||||||||| | |||||||||    
T  29270426 aaacagcttatgaagatacaattttcgtta 29270455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 461
Target Start/End: Complemental strand, 34707840 - 34707667
Alignment:
Q  287 taaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||| | ||||||| ||||||| ||||||||||| | ||| ||||||    
T  34707840 taaggcctgtttggattgacttatttttgagcttatgcaaaacaacttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagttt 34707741  T
Q  386 ct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
     | ||||||||    | ||||||| | |||||||||| || |||   ||| |||||||||||||| |||||||||||    
T  34707740 atgaaaaaacagctaacgaagatacaattttcgttagcgagaac---ttacgaattaacataaaaacttatttattt 34707667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 461
Target Start/End: Original strand, 584987 - 585152
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    |||||||||||||||||||| |||||||||||||||  |||| |||||||| ||||||| ||| ||| |||| |||||| |  || |||||| | |||||    
T  584987 gtttggattgacttatttttcagcttatgtaaaacacattatgcaaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaa 585086  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    ||||  |||||||||| | |||||||||||   |||   ||| ||||||||||| ||||||||| ||||    
T  585087 acaacttatgaagatacaattttcgttagtttgaac---ttaagaattaacatataagcttattgattt 585152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 466
Target Start/End: Original strand, 3845819 - 3845991
Alignment:
Q  292 tctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaa- 389  Q
    ||||||| ||||| ||||| |||||||||||| || |||  |||  |||||||| ||||||| || |||| ||||||||||| ||||| |||||| | |     
T  3845819 tctgtttagattggcttatatttgagcttatgcaacacagattacacaaataaataagcttttatatattattcataagcttgtcaagctagtttatgac 3845918  T
Q  390 aaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||||   |||||||||| | |||||| |||||||||| |||   |||||||||||||||||||||||||| ||||    
T  3845919 aaaacagcatatgaagataca-ttttcgctagtgaaaacatat---gaattaacataaaagcttatttatttgcata 3845991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 466
Target Start/End: Complemental strand, 40240659 - 40240526
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| |||||||||||||||| ||||||| ||||||||| | || || |||||| | |||||||||  |||||||||| | ||||||||||||| | ||    
T  40240659 cttatgcaaataaagaagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtgagagct 40240560  T
Q  430 tattatgaattaacataaaagcttatttatttacata 466  Q
    |||   ||||||| |||||||||||||||||| ||||    
T  40240559 tat---gaattaagataaaagcttatttatttgcata 40240526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 293 - 461
Target Start/End: Complemental strand, 22809315 - 22809147
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagc-tttaatgtatt-ttcataagcttatcaagatagtttct-aa 389  Q
    ||||||| ||||||||||||||||| ||||| |||||| ||||| |||||||| |||| ||| || |||| ||||||||||| ||||| |||||| | ||    
T  22809315 ctgtttgaattgacttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaa 22809216  T
Q  390 aaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    |||||    |||||||||| | |||||||||   | |||   |||||||||||||||||| |||||||||||    
T  22809215 aaaactgcttatgaagatacaattttcgttaagaagaac---ttatgaattaacataaaaacttatttattt 22809147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 291 - 385
Target Start/End: Original strand, 21296729 - 21296824
Alignment:
Q  291 gtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    ||||||||||||||||||||||||||| ||||| ||||||| |||| |||||||| ||| ||| || |||| |||||| | |||||||| ||||||    
T  21296729 gtctgtttggattgacttatttttgagattatgcaaaacaatttatgcaaataaataagtttttatctattattcatacgtttatcaaggtagttt 21296824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 10272089 - 10272167
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagctt 372  Q
    |||||||||||||||||||| |||||||| ||||||||| || |||||||| || |||| ||||||| |||||||||||    
T  10272089 gtttggattgacttattttttagcttatgcaaaacaactcatgcaaataaataaacttttatgtattattcataagctt 10272167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 461
Target Start/End: Original strand, 7292649 - 7292809
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaa 393  Q
    |||||||||||||| |||||| |||||||||| |||||||| |||||| | ||||| | ||||||| |||||||| || |||| ||||||| | ||||||    
T  7292649 tttggattgactta-ttttgaacttatgtaaagcaacttatgcaaatacataagctcttatgtattattcataagtttgtcaatatagtttatgaaaaaa 7292747  T
Q  394 caatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    || | ||||| ||||   || || ||||||||| |   ||| |||||||||||||| |||||||||||    
T  7292748 cagtttatgatgata---ttatccttagtgaaagc---ttaggaattaacataaaaacttatttattt 7292809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 461
Target Start/End: Complemental strand, 48597891 - 48597820
Alignment:
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    |||||||||  |||||||||| | ||||||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  48597891 aaaaaacaacttatgaagatacaattttcgtcagtgagaactta--atgaattaacataaaagcttatttattt 48597820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 461
Target Start/End: Complemental strand, 43080016 - 43079888
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| |||||||| ||||||| |||| || ||||||||||| ||||| |||||| | ||||||||   |||||||||| | ||||||| | ||| ||||    
T  43080016 cttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtgattgagaact 43079917  T
Q  430 tattatgaattaacataaaagcttatttattt 461  Q
    |||   |||||||| |||||||||||||||||    
T  43079916 tat---gaattaacttaaaagcttatttattt 43079888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 466
Target Start/End: Original strand, 4974273 - 4974448
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct- 387  Q
    |||| |||||||||| |||||||| ||||||||| ||| || ||||| |||||||| ||||  ||||||||| || |||| |||   ||| |||||| |     
T  4974273 ggtccgtttggattggcttattttagagcttatgcaaagcagcttatgcaaataaataagcactaatgtattatttataaacttgctaaggtagtttatg 4974372  T
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||  |||||| ||| | | || ||| || ||| |||||   |||||||||||||||||||||||||| ||||    
T  4974373 aaaaaacaagttatgaatatacaatatttgttggtaaaatcttat---gaattaacataaaagcttatttatttgcata 4974448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 492
Target Start/End: Original strand, 10667374 - 10667562
Alignment:
Q  304 gacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaa-aacaatgtat 401  Q
    ||||||||||  || |||| ||||| ||||||  |||||||| ||||||  ||||||| ||||||||||| ||||  |||||| | ||| |||| | |||    
T  10667374 gacttattttgaagtttatataaaataacttacgcaaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttat 10667473  T
Q  402 gaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacat-agcttaaaaataagtcaatcaaaacgg 492  Q
    |||||||||  ||| ||||||||||||||| |||  |||| | ||||||||| ||||||| ||| | |||| |||||| |||||| ||||||    
T  10667474 gaagatataacttttgttagtgaaaactta-tat--attatcgtaaaagcttgtttatttgcataaacttataaataaatcaatccaaacgg 10667562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 35480310 - 35480361
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  35480310 ctgtttggattgacttatttttgagcttatg-aaaataacttatgcaaataaa 35480361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 43079844 - 43079902
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||||||||||||||||  ||||||||| |||| | |||||||||||||| |||||||    
T  43079844 gtttggattgacttatttacgagcttatgaaaaatagcttattcaaataaataagcttt 43079902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 416
Target Start/End: Original strand, 10448739 - 10448864
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaa 390  Q
    |||||||||||  |||||||| ||||||||| |||||||||||| |||||||| | || || ||||||| || |||||||| | ||  |||||| | |||    
T  10448739 ctgtttggattagcttattttagagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaa 10448838  T
Q  391 aaacaatgtatgaagatatagttttc 416  Q
    ||||| | ||||||| |||| |||||    
T  10448839 aaacagtttatgaaggtataattttc 10448864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 332 - 433
Target Start/End: Original strand, 52021250 - 52021354
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct--aaaaaacaatgtatgaagatatagttttcgttagtgaaaac 428  Q
    ||||| |||||||| | ||||| ||||||| |||||||| || ||||| |||||| |  ||||||||   |||||||||||| ||||||||||||| |||    
T  52021250 cttatgcaaataaatatgcttttatgtattattcataagattgtcaaggtagtttatgaaaaaaacagcttatgaagatataattttcgttagtgagaac 52021349  T
Q  429 ttatt 433  Q
    |||||    
T  52021350 ttatt 52021354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 361
Target Start/End: Complemental strand, 4257418 - 4257354
Alignment:
Q  297 ttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    |||||||  |||||||| |||||||| ||||||||||||| |||||||| ||| ||| |||||||    
T  4257418 ttggattagcttattttagagcttatataaaacaacttatgcaaataaataagtttttatgtatt 4257354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 369
Target Start/End: Complemental strand, 29002895 - 29002815
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatg-tattttcataag 369  Q
    |||||||||||||| ||||||||||||||||||  |||| |  |||| |||||||| ||| ||| ||| ||||||||||||    
T  29002895 ggtctgtttggattaacttatttttgagcttataaaaaatactttatgcaaataaataagattttatgttattttcataag 29002815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 361
Target Start/End: Original strand, 23555446 - 23555517
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    |||| |||||||||| |||||||||||||||||   |||||  |||| |||||||| ||||||| |||||||    
T  23555446 ggtccgtttggattggcttatttttgagcttatacgaaacagtttatgcaaataaataagcttttatgtatt 23555517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 464
Target Start/End: Complemental strand, 29830663 - 29830590
Alignment:
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttaca 464  Q
    |||||||| | |||||||||| | ||||||||||||| |||   |||| |||||| |||||| ||||||||||||||    
T  29830663 aaaaaacagtttatgaagatacaattttcgttagtgagaac---ttataaattaaaataaaaacttatttatttaca 29830590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 432
Target Start/End: Complemental strand, 32901242 - 32901128
Alignment:
Q  320 tatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaa-aaaacaatgtatgaagatatagttttcg 417  Q
    |||| ||||||||||||  ||||||| ||||||| || |||| |||| ||  || | |||||||||| ||| |||||||  |||||||||| | ||||||    
T  32901242 tatgcaaaacaacttatgtaaataaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattttcg 32901143  T
Q  418 ttagtgaaaacttat 432  Q
    ||||||| |||||||    
T  32901142 ttagtgagaacttat 32901128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Original strand, 38524191 - 38524225
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  38524191 ttatgaattaacataaaagcttatttatttgcata 38524225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 40240488 - 40240545
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||||||||||||||||| ||||||||| |||| | ||||| |||||||| |||||||    
T  40240488 gtttggattgacttatttt-gagcttatgaaaaatagcttatgcaaataaataagcttt 40240545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 46573437 - 46573403
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  46573437 ttatgaattaacataaaagcttatttatttgcata 46573403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 50022076 - 50022010
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtat 360  Q
    ||||||||||| |||||||| ||| ||||| ||||||  |||| |||||||| ||||||| ||||||    
T  50022076 tgtttggattggcttattttagagattatgcaaaacagtttatgcaaataaataagctttgatgtat 50022010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 10449050 - 10449114
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||||| |||| ||||||||||||| |||||||   ||||||| |||||| ||||||||||| ||||    
T  10449050 tatgaaggtataattttcgttagtgagaacttat---gaattaagataaaaacttatttatttgcata 10449114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 490
Target Start/End: Original strand, 10521164 - 10521316
Alignment:
Q  338 caaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaa-aacaatgtatgaagatatagttttcgttagtgaaaacttattat 435  Q
    |||||||| ||||||  ||||||| ||||||||||| ||||  |||||| | ||| |||| | ||||||||||||  ||| ||||||||||||   ||||    
T  10521164 caaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagtgaaaac---ttat 10521260  T
Q  436 gaattaacataaaagcttatttatttacat-agcttaaaaataagtcaatcaaaac 490  Q
     ||||| | ||||||||| ||||||| ||| | |||| |||||| |||||| ||||    
T  10521261 aaattatcgtaaaagcttgtttatttgcataaacttataaataaatcaatccaaac 10521316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 17752144 - 17752080
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||| | ||||||||||| | ||||||| |   ||||||||||||| |||||||||||||||    
T  17752144 tatgaagatacaattttcgttagtaagaacttataa---attaacataaaagtttatttatttacata 17752080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 19053464 - 19053400
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||| | ||||||||||| | ||||||| |   ||||||||||||| |||||||||||||||    
T  19053464 tatgaagatacaattttcgttagtaagaacttataa---attaacataaaagtttatttatttacata 19053400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 25341343 - 25341407
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||| | |||||||||| |||||||| |   ||||||| |||||| ||||||||||||||||    
T  25341343 tatgaagataaaattttcgttagggaaaacttgt---gaattaatataaaaacttatttatttacata 25341407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 461
Target Start/End: Complemental strand, 52895388 - 52895359
Alignment:
Q  432 ttatgaattaacataaaagcttatttattt 461  Q
    ||||||||||||||||||||||||||||||    
T  52895388 ttatgaattaacataaaagcttatttattt 52895359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 53261678 - 53261735
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    |||||||||||||| ||||||||||||| |||| | ||||| ||| |||| |||||||    
T  53261678 tttggattgacttagttttgagcttatgaaaaatagcttatgcaattaaataagcttt 53261735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 53261865 - 53261816
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    ||||||||| |||||||||||||||||| | |||| ||||| ||||||||    
T  53261865 tttggattggcttatttttgagcttatggacaacagcttatgcaaataaa 53261816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 452
Target Start/End: Complemental strand, 3870308 - 3870189
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| |||| ||| ||||||| |||| || ||||||||||| ||||| |||||| | |||||||||  ||||| |||| | ||||| ||| ||| ||||    
T  3870308 cttatgcaaaaaaataagcttttatgttttgttcataagcttgtcaaggtagtttatgaaaaaacaacatatgatgatacacttttcattaatgagaact 3870209  T
Q  430 tattatgaattaacataaaagct 452  Q
    |||   |||||||||||||||||    
T  3870208 tat---gaattaacataaaagct 3870189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 20685963 - 20685911
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||||||||||||||||| |||||||| ||||   ||||| ||||||||    
T  20685963 ctgtttggattgacttattttttagcttatgaaaaattgcttatccaaataaa 20685911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 30383730 - 30383798
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||| ||||||||||||| ||||| ||||||||| |||| |  |||| | ||||||||||| |||||||    
T  30383730 ggtcggtttggattgactaattttagagcttatgcaaaatagtttatgcgaataaagaagcattaatgt 30383798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 1e-27; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 466
Target Start/End: Original strand, 4026904 - 4027062
Alignment:
Q  306 cttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttcataagcttatcaagatagtttct-aaaaaacaatgtatgaa 404  Q
    |||||||||||||||||| |||||  ||||| |||||||| ||||||| ||||||| |||||||||| ||||| |||||| | ||||||||   ||||||    
T  4026904 cttatttttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtattatcataagcttgtcaaggtagtttatgaaaaaacagcttatgaa 4027003  T
Q  405 gatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||| | |||| |||||||| |||   |||||||||||||||| ||||||||||||| ||||    
T  4027004 gatacaatttttgttagtgagaac---ttatgaattaacataatagcttatttatttgcata 4027062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 293 - 466
Target Start/End: Original strand, 21788422 - 21788594
Alignment:
Q  293 ctgtttggattga-cttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aa 389  Q
    ||||||||||||| |||||||| ||| ||||| |||||| ||||| |||||||| ||||||| || |||| ||||||||||| | |||||||||| | ||    
T  21788422 ctgtttggattgagcttatttt-gagtttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaa 21788520  T
Q  390 aaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||  |||||||||| | ||||||||||||| | |||||   ||||||| |||||||||||||||||| ||||    
T  21788521 aaaacaacttatgaagataaaattttcgttagtgagagcttat---gaattaatataaaagcttatttatttgcata 21788594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 38215990 - 38216156
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt-ctaaaaa 392  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||| ||    | ||||||| ||||||||||| ||||| ||||||   |||||    
T  38215990 gtttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataa----ttatgtattattcataagcttgtcaaggtagtttaggaaaaa 38216085  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    | |   |||||||||| | ||||||||||||| |||   |||||| ||||||||||||||||||||||| ||||    
T  38216086 atagcatatgaagatacaattttcgttagtgagaac---ttatgagttaacataaaagcttatttatttgcata 38216156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 466
Target Start/End: Complemental strand, 7481026 - 7480848
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-----ttcataagcttatcaagatagtt 384  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||| |||||||| ||  ||| || ||||     |||||||| || | ||| |||||    
T  7481026 ggtctgtttggatcgacttatttttgaacttatgcaaaacaacttatgcaaataaataatattttatatattattcattcataagtttgtgaaggtagtt 7480927  T
Q  385 tctaaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    | ||||||||||  || ||||||| | ||||| ||||| | |||   |||||||||||||||||| ||||||||||| ||||    
T  7480926 tataaaaaacaacttaggaagatacaattttcattagtcagaac---ttatgaattaacataaaaacttatttatttgcata 7480848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 311 - 466
Target Start/End: Complemental strand, 33321415 - 33321261
Alignment:
Q  311 ttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagata 408  Q
    ||||||||||||| |||||||||| | |||||||| ||||||| |||| || ||||||||||| ||||| |||||| | ||||||||   ||||||||||    
T  33321415 ttttgagcttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagata 33321316  T
Q  409 tagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
     | |||| |||||||| | |   || |||||||||||||| | |||||||||| ||||    
T  33321315 caatttttgttagtgagagc---ttgtgaattaacataaaggtttatttatttgcata 33321261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 492
Target Start/End: Complemental strand, 9140832 - 9140652
Alignment:
Q  311 ttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatat 409  Q
    ||||||||||||  |||||| | ||| |||||||| || |||| ||||||| |||||| ||| ||||  |||||| |  ||||||| | ||||||||| |    
T  9140832 ttttgagcttatacaaaacatcgtatgcaaataaataaccttttatgtattatcataaacttgtcaatgtagtttatgtaaaaacagtttatgaagatgt 9140733  T
Q  410 agttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacat-agcttaaaaataagtcaatcaaaacgg 492  Q
    | ||||||||  |||||||   | || |||||||||||||| |||||||| | ||| |||| ||||||||||||||| ||||||    
T  9140732 acttttcgttgatgaaaac---tcataaattaacataaaagtttatttatatgcataagctcaaaaataagtcaatccaaacgg 9140652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 385
Target Start/End: Complemental strand, 33321524 - 33321431
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    |||||| ||||||||||||||| |||||||| |||||||||||| |||||||  ||| ||| |||||||  |||||||||| ||||| ||||||    
T  33321524 ctgtttcgattgacttattttttagcttatgcaaaacaacttatgcaaataattaagtttttatgtattactcataagcttgtcaaggtagttt 33321431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 293 - 461
Target Start/End: Original strand, 11776949 - 11777116
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaa 390  Q
    |||||||||||||||||||||  |||  |||||||||| ||||| || ||||| ||||||| ||||||| || |||||||| | ||| |||||| | |||    
T  11776949 ctgtttggattgacttattttaaagcgcatgtaaaacagcttatgcatataaataagcttttatgtattatttataagcttgttaagttagtttatgaaa 11777048  T
Q  391 aaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    | |||   |||||||||| | |||| |||||||| |||   |||| || |||||||||| |||||||||||    
T  11777049 acacagcttatgaagatacactttttgttagtgagaac---ttataaactaacataaaaccttatttattt 11777116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 293 - 466
Target Start/End: Original strand, 5903498 - 5903675
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaa 390  Q
    ||||||| || |||||||||||||||| ||| |||||||||||| |||||||| |||| ||| ||||||  |||||||||| ||||  |||||  | |||    
T  5903498 ctgtttgaatcgacttatttttgagctaatgcaaaacaacttatgcaaataaacaagcattagtgtattactcataagcttgtcaaagtagttaatgaaa 5903597  T
Q  391 aaacaatgtatgaagatatagttttcgttagtgaaa--acttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||   |||||||||| | |||| |||||||| |  |    ||| |||| ||||||||||||||||||||| ||||    
T  5903598 aaacatcttatgaagatacaatttttgttagtgagatgagaacttaagaataaacataaaagcttatttatttgcata 5903675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 296 - 466
Target Start/End: Complemental strand, 25836830 - 25836662
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaa 393  Q
    |||| |||| ||||||||||||| |  | |||||| ||||| |||||||| | ||||| ||||||| ||||||||||| ||||| |||||| | ||||||    
T  25836830 tttgaattgccttatttttgagcctgcgcaaaacagcttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 25836731  T
Q  394 caatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |    |||||||| | | || |||||||||| |||||||   |||| ||||||||||||||||||||| ||||    
T  25836730 cggcttatgaagacacaattatcgttagtgagaacttat---gaat-aacataaaagcttatttatttgcata 25836662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 295 - 461
Target Start/End: Original strand, 29774712 - 29774877
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    |||||| ||| ||||||||| |||||||| | |||||||||| |||||||| || |||| ||| ||| ||||| || || | ||| |||||| | |||||    
T  29774712 gtttgggttgtcttattttttagcttatgcataacaacttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaa 29774811  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    ||    |||||| ||| | ||||||||||||| |||||||   |||||||| |||||||||||||||||    
T  29774812 acggcttatgaaaatacaattttcgttagtgagaacttat---gaattaacgtaaaagcttatttattt 29774877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 755619 - 755684
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||| ||||||| |||||||||||| |||| | ||||| |||||||||||||||| ||||    
T  755619 ctgtttggatcgacttatctttgagcttatgaaaaatagcttatgcaaataaagaagcttttatgt 755684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 466
Target Start/End: Original strand, 8832534 - 8832594
Alignment:
Q  403 aagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||| | |||||||||||||||||||||   |||||||||||||||||||||||||| ||||    
T  8832534 aagatacaattttcgttagtgaaaacttat---gaattaacataaaagcttatttatttgcata 8832594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 2757188 - 2757129
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttta 354  Q
    ||||||||||||||||||| |||||||| ||||||| ||||| |||||||| ||| ||||    
T  2757188 gtttggattgacttattttagagcttatataaaacagcttatgcaaataaataagtttta 2757129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 2790195 - 2790140
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    ||||||||||| ||| |||||||||||||||||| |||||| ||||| ||||||||    
T  2790195 ggtctgtttgggttggcttatttttgagcttatgcaaaacagcttatgcaaataaa 2790140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 383
Target Start/End: Original strand, 4090462 - 4090545
Alignment:
Q  301 attgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagt 383  Q
    |||| |||||||||||||||||| |||||| ||||| |||||||| || |||| ||||||| ||||||| ||| ||||| ||||    
T  4090462 attggcttatttttgagcttatgcaaaacagcttatgcaaataaataaactttgatgtattattcataatcttgtcaaggtagt 4090545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 8832633 - 8832570
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||||||||||||| |||||||| |||| | ||||| |||||||| ||||||| ||||    
T  8832633 gtttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 8832570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 36501566 - 36501464
Alignment:
Q  362 ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatt 460  Q
    ||||||||||| ||||| |||||| | ||||||||   |||||||||| | ||| ||||||||| |||| ||   |||||||||||||||||||||||||    
T  36501566 ttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaactcat---gaattaacataaaagcttatttatt 36501470  T
Q  461 tacata 466  Q
    | ||||    
T  36501469 tgcata 36501464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 4533503 - 4533441
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctt 352  Q
    |||| ||||||||| ||||||||||||||||||| |||| | ||||| |||||||| ||||||    
T  4533503 ggtccgtttggattaacttatttttgagcttatgaaaaatagcttatgcaaataaataagctt 4533441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 5903716 - 5903651
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||||| |||||||||||||| ||| |||| | ||||| |||||||| ||||||| ||||    
T  5903716 ctgtttggattggcttatttttgagctcatgaaaaatagcttatgcaaataaataagcttttatgt 5903651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 25836621 - 25836686
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||| |||||||||||||||||||| | || | ||||| |||||||| ||||||| ||||    
T  25836621 ctgtttggatcgacttatttttgagcttatgaagaataccttatgcaaataaataagcttttatgt 25836686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 33321223 - 33321272
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    ||||||||| ||||||||||||||||||||||| | ||||| ||||||||    
T  33321223 tttggattggcttatttttgagcttatgtaaaatagcttatgcaaataaa 33321272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 385
Target Start/End: Complemental strand, 34913491 - 34913418
Alignment:
Q  313 ttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    ||||||||||| |||||| ||||| |||||||| ||||||| ||||||| |||||||| || | ||||||||||    
T  34913491 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagttt 34913418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 36501423 - 36501488
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||||| ||||||||||||||| || |||| | ||||| |||||||| ||||||| ||||    
T  36501423 ctgtttggattggcttatttttgagcttgtgaaaaatagcttatgcaaataaataagcttttatgt 36501488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 5903793 - 5903733
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    |||||||||||| |||||||||||||| ||| |||| | ||||| |||||||| |||||||    
T  5903793 ctgtttggattggcttatttttgagctcatgaaaaatagcttatgcaaataaataagcttt 5903733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 377
Target Start/End: Original strand, 13097881 - 13097968
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttat-tcaaataaagaagctttaatgtat--tttcataagcttatcaa 377  Q
    |||||||||||| |||||||||||||||||| |||||| |||||   ||| ||| ||||||| ||||||  |||||||||||| ||||    
T  13097881 ctgtttggattggcttatttttgagcttatgcaaaacagcttatggaaaaaaaaaaagctttgatgtattatttcataagcttgtcaa 13097968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 493
Target Start/End: Complemental strand, 17317205 - 17317157
Alignment:
Q  446 aaaagcttatttatttacat-agcttaaaaataagtcaatcaaaacgga 493  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  17317205 aaaagcttatttatttacataagctcaaaaataagtcaatccaaacgga 17317157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 327
Target Start/End: Original strand, 17317160 - 17317192
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaa 327  Q
    |||||||||||||||||||||||||||||||||    
T  17317160 gtttggattgacttatttttgagcttatgtaaa 17317192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 466
Target Start/End: Complemental strand, 27881105 - 27880946
Alignment:
Q  306 cttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatga 403  Q
    |||||||| ||||||||| |||| | ||||| |||||||| | | | | ||||||| || ||||| |||| ||| ||| || | |||||||||| |||||    
T  27881105 cttattttagagcttatgcaaaatagcttatgcaaataaatatgttattatgtattatttataagtttattaaggtagcttatgaaaaaacaatttatga 27881006  T
Q  404 agatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |  |||| ||||||||| |||||||   ||||||||||| ||||||  |||||||||| ||||    
T  27881005 aagtatacttttcgttaatgaaaac---ttatgaattaagataaaaatttatttatttgcata 27880946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 453
Target Start/End: Complemental strand, 12683726 - 12683568
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatca-agatagtttctaaaa 391  Q
    |||||| |||| ||||||||| |||| | | ||||||  |||| |||||||| ||| ||||||||||| ||||||||||| ||| ||| | || | ||||    
T  12683726 tgtttgtattggcttatttttaagctgacgcaaaacagattatgcaaataaataagttttaatgtattattcataagcttgtcagagaaatttacgaaaa 12683627  T
Q  392 aacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagctt 453  Q
    ||||   |||||||||| | |||| |||| ||| |||   |||||||| |||||||||||||    
T  12683626 aacagcttatgaagatacaattttggttactgagaac---ttatgaataaacataaaagctt 12683568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 466
Target Start/End: Original strand, 37420008 - 37420043
Alignment:
Q  431 attatgaattaacataaaagcttatttatttacata 466  Q
    ||||||||||||||||||||||||||||||| ||||    
T  37420008 attatgaattaacataaaagcttatttatttgcata 37420043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 466
Target Start/End: Original strand, 42064886 - 42064988
Alignment:
Q  362 ttcataagcttatcaagatagtttctaaaaaac-aatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatt 460  Q
    ||||||||||| | ||| |||||| |||||||  ||  |||||||||||  ||||||||||| | |||||||   ||||||| |||||||||||||||||    
T  42064886 ttcataagcttgttaaggtagtttataaaaaaataacttatgaagatatcattttcgttagtaagaacttat---gaattaatataaaagcttatttatt 42064982  T
Q  461 tacata 466  Q
    | ||||    
T  42064983 tgcata 42064988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 735882 - 735952
Alignment:
Q  291 gtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    ||||||||||||||||||| ||| ||||||||| |||| ||||| |  ||| ||| ||||||| |||||||    
T  735882 gtctgtttggattgacttaatttagagcttatgcaaaataacttgtgtaaacaaataagcttttatgtatt 735952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 17317337 - 17317288
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||| |||||| |||||||||||||||||||||||| |||| |||||||||    
T  17317337 gtttagattgaattatttttgagcttatgtaaaacagctta-tcaaataaa 17317288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 371
Target Start/End: Complemental strand, 27703562 - 27703500
Alignment:
Q  310 tttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagct 371  Q
    |||||||||||||| |||||| ||||| |||||||| ||||||| || |||| ||||||||||    
T  27703562 tttttgagcttatgcaaaacagcttatgcaaataaataagcttttatatattattcataagct 27703500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 393
Target Start/End: Complemental strand, 13056440 - 13056347
Alignment:
Q  301 attgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatttt-cataagcttatcaagatagtttctaaaaaa 393  Q
    |||| ||||||||| |||| ||| |||||   |||| |||||| | ||||||| ||||||||| ||||||||| ||||| |||||| |||||||    
T  13056440 attggcttattttttagctcatgcaaaacggattatgcaaatagataagcttttatgtatttttcataagcttgtcaaggtagtttataaaaaa 13056347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 466
Target Start/End: Original strand, 15155778 - 15155950
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaa 390  Q
    |||||||||||  ||||||||   ||||||||||||||||||||  ||||||| | ||||| ||||||| || |||| ||| | ||   ||||| | |||    
T  15155778 ctgtttggattagcttattttaaggcttatgtaaaacaacttatgaaaataaatatgcttttatgtattatttataatcttgttaatgaagtttatgaaa 15155877  T
Q  391 aaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||||| || |||| || | ||| ||||| ||| |||   ||||||||||| |||||| ||||||||||| ||||    
T  15155878 aaacaatttaagaaggtacaatttccgttaatgagaac---ttatgaattaagataaaaacttatttattttcata 15155950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 323
Target Start/End: Original strand, 9140654 - 9140682
Alignment:
Q  295 gtttggattgacttatttttgagcttatg 323  Q
    |||||||||||||||||||||||||||||    
T  9140654 gtttggattgacttatttttgagcttatg 9140682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 13098081 - 13098021
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||||||||||| || |||||||||||||| | || | ||||| |||||||| |||||||    
T  13098081 ctgtttggattgaattgtttttgagcttatgaataatagcttatgcaaataaataagcttt 13098021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 17546486 - 17546561
Alignment:
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||  |||||| ||||  |||||||||||||||||   |||| || ||||||||||  |||||||||||||||    
T  17546486 aaaaaacaacttatgaatatatcattttcgttagtgaaaac---ttataaactaacataaaaatttatttatttacata 17546561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 30382289 - 30382218
Alignment:
Q  392 aacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||| || ||||||| | ||||||||||||||| ||||| |   ||||| | |||||||||||||||||||||    
T  30382289 aacaatttaggaagatacaattttcgttagtgaaagcttataa---attaaaacaaaagcttatttatttacata 30382218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 458
Target Start/End: Complemental strand, 42839393 - 42839278
Alignment:
Q  341 ataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaat 439  Q
    ||||| ||| ||| ||||||| |||||||| || ||||| |||||| | |||| ||   |||||||||  | |||||||||| |||||||||| |   ||    
T  42839393 ataaataagtttttatgtattattcataagtttgtcaagttagtttatgaaaaccagcttatgaagatgcaattttcgttagagaaaacttatca---at 42839297  T
Q  440 taacataaaagcttattta 458  Q
    |||||||||||||||||||    
T  42839296 taacataaaagcttattta 42839278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 37712035 - 37712204
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttcataagcttatcaagatagtttct-aaaaaa 393  Q
    ||||||||||| ||||||||||||| ||| ||||||  |||| ||||| || ||||||| |||||| ||||||||||| ||||| |||||| | ||||||    
T  37712035 gtttggattgatttatttttgagctaatgaaaaacagtttatgcaaatgaataagcttttatgtatattcataagcttgtcaaggtagtttatgaaaaaa 37712134  T
Q  394 caatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||  |||||||||| |  |||||||||| | |||   ||||||||||||||||||| |||||||||| ||||    
T  37712135 caacttatgaagatacaactttcgttagtaagaac---ttatgaattaacataaaagtttatttatttgcata 37712204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 290 - 432
Target Start/End: Original strand, 35590092 - 35590236
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtat-tttcataagcttatcaagatagtttct- 387  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||||  ||||||||||| ||||| | |||| |     
T  35590092 ggtctggttggattgacttattttttagcttatgtaaaacaacttatgcaaataaataagcttttatgtatagttcataagcttgtcaaggttgtttatg 35590191  T
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttat 432  Q
    ||||||||   |||||||||| | ||||||| ||||| |||||||    
T  35590192 aaaaaacagcttatgaagatacaattttcgtcagtgagaacttat 35590236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 4068082 - 4068252
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    |||||||||| ||||||||| ||||| || |||| | ||| | |||||||| ||||||| ||||||| ||||||||||| ||||| |||||| | |||||    
T  4068082 gtttggattggcttattttttagcttttgcaaaatagcttgtgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 4068181  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||  ||||||||||   ||||||||||||| |||||||   ||||||| ||||||| |||||||||| ||||    
T  4068182 acaacttatgaagatactattttcgttagtgagaacttat---gaattaatataaaagtttatttatttgcata 4068252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 332 - 466
Target Start/End: Original strand, 48819303 - 48819436
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| ||||||||  |||||||||||||| ||||||||||| ||||| |||||| | ||||||||   |||||||||| | |||| |||||||| ||||    
T  48819303 cttatgcaaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgagaact 48819402  T
Q  430 tattatgaattaacataaaagcttatttatttacata 466  Q
    |||   |||||||||||||||||||||||||| ||||    
T  48819403 tat---gaattaacataaaagcttatttatttgcata 48819436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 288 - 466
Target Start/End: Original strand, 10365131 - 10365307
Alignment:
Q  288 aaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttc 386  Q
    |||| |||||||||||| || |||||| ||||||||||||| || |||| ||||| || || |||| ||||||| || |||||||| ||||  ||||||     
T  10365131 aaggcctgtttggattgcctaatttttcagcttatgtaaaataatttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagttta 10365230  T
Q  387 taaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    | ||||||||   ||||| ||| | ||||||||||| ||||||| |||  |||||||||||||||||||| |||| ||||    
T  10365231 tgaaaaacaaccgatgaatatacaattttcgttagtaaaaactt-tta--aattaacataaaagcttattcatttgcata 10365307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 466
Target Start/End: Complemental strand, 9572886 - 9572733
Alignment:
Q  313 ttgagcttatgtaaaacaacttattcaaataaagaagcttta-atgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatat 409  Q
    ||||||||||| |||||| ||| | |||||||| |||||||  || |||| |||||||| || | ||| |||||| | |||||||||| ||||||||||     
T  9572886 ttgagcttatgcaaaacagcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaagataa 9572787  T
Q  410 agttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||| |||||||| |||||||   ||||||| |||||||||||||||||| ||||    
T  9572786 agtttttgttagtgagaacttat---gaattaatataaaagcttatttatttgcata 9572733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 460
Target Start/End: Complemental strand, 3069936 - 3069809
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| |||||||  ||||||||||||||| ||||||||||| ||||| |||||| | ||||||||   |||||||||| | |||||  |||||| ||||    
T  3069936 cttatacaaataagtaagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgagaact 3069837  T
Q  430 tattatgaattaacataaaagcttatttatt 460  Q
    |||   |||||||||||||||||||||||||    
T  3069836 tat---gaattaacataaaagcttatttatt 3069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 340 - 463
Target Start/End: Complemental strand, 15515421 - 15515299
Alignment:
Q  340 aataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatga 437  Q
    |||||| ||||||| ||||||| ||||||||||| ||||| |||||| | |||||| |   |||||||||| | ||||||||||||| |||||||   ||    
T  15515421 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaacttat---ga 15515325  T
Q  438 attaacataaaagcttatttatttac 463  Q
    |||||||| |||||||||||||||||    
T  15515324 attaacatgaaagcttatttatttac 15515299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 296 - 466
Target Start/End: Complemental strand, 26946223 - 26946053
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagc-tttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    |||||||||||||||||||||||||||| |||||  |||||  ||||||| |||| ||| |||| || ||||||||||| | ||| |||||| | |||||    
T  26946223 tttggattgacttatttttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaa 26946124  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||  |||||||||| | ||||| ||||||| |||   || |||||||  | |||||||| ||||||||||||    
T  26946123 acaacttatgaagatacaattttccttagtgacaac---ttgtgaattagtacaaaagcttgtttatttacata 26946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 26988124 - 26988285
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    ||||||||||| ||||||||||||||||| |||||||         ||||| ||||||| |||| || ||||||||||| ||||| |||||| | |||||    
T  26988124 gtttggattgaattatttttgagcttatgcaaaacaa---------ataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaa 26988214  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||   |||||||||| | || |||||||| |||||||||   ||||||||||||||||| |||||||| ||||    
T  26988215 acagcttatgaagatacaattgtcgttagtaaaaacttat---gaattaacataaaagctaatttatttgcata 26988285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 359
Target Start/End: Original strand, 994620 - 994688
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatg--taaaacaacttattcaaataaagaagctttaatgta 359  Q
    |||||||||||||||||||||||||||||||   |||| |||||||||||||||| ||||||| |||||    
T  994620 ctgtttggattgacttatttttgagcttatgaaaaaaataacttattcaaataaacaagcttttatgta 994688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 461
Target Start/End: Complemental strand, 1565498 - 1565328
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct--aaaaa 392  Q
    |||||||||||||| || ||||||||||  ||||| |||||  ||||||| ||||||| ||| ||| ||| ||||||| ||||| |||||| |  |||||    
T  1565498 tttggattgacttacttctgagcttatg--aaacagcttatgtaaataaacaagcttttatgcattattcgtaagcttgtcaaggtagtttatgaaaaaa 1565401  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttat----tatgaattaacataaaagcttatttattt 461  Q
    | ||  |||||||||| | |||||| ||||||  ||||||    |||||| ||||||||||||||||||||||    
T  1565400 ataacatatgaagatacaattttcgctagtgagtacttatgatttatgaaataacataaaagcttatttattt 1565328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 461
Target Start/End: Original strand, 10082216 - 10082383
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct--aaa 390  Q
    |||||| || |||||||||||||| || ||| ||||||||||| |||||||| ||| ||| |||| || || ||||| || ||||| |||||| |  |||    
T  10082216 tgtttgaatggacttatttttgagtttttgtgaaacaacttatgcaaataaataagtttttatgtgttattgataagtttgtcaaggtagtttatgaaaa 10082315  T
Q  391 aaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    ||||||  |||||| ||| | |||| ||| |||| |||   ||||||||||| ||||||||||||||||||    
T  10082316 aaacaacttatgaaaatacatttttggttcgtgagaac---ttatgaattaatataaaagcttatttattt 10082383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 1265817 - 1265721
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||| |||| | | ||| ||| ||||||| |||||||  || ||||| ||||||    
T  1265817 ggtctgtttgaattgacttatttttgagcttatgcaaaacaacttatacaaacagataagattttatgtattattcataattttgtcaaggtagttt 1265721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 6337831 - 6337705
Alignment:
Q  339 aaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatg 436  Q
    ||||||| ||||||| ||||||| ||||||||||| ||||| |||||| | ||||||||   |||||||||| | |||| ||||| || |||||||   |    
T  6337831 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgagaacttat---g 6337735  T
Q  437 aattaacataaaagcttatttatttacata 466  Q
    ||||||||||||||||||||| ||| ||||    
T  6337734 aattaacataaaagcttatttgtttgcata 6337705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 18327491 - 18327582
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    ||||||||||||||||||| ||  ||||  |||||| ||||| |||||||| ||||||| |||||||  |||||||||| ||||||||||||    
T  18327491 gtttggattgacttattttggaatttattcaaaacagcttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagttt 18327582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 466
Target Start/End: Complemental strand, 35897742 - 35897568
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-----a 388  Q
    ||||||||||| |||||||| || ||||| |||||||||||| |||||||| ||| ||| || |||| ||||||||||| ||||  |||||| |     |    
T  35897742 gtttggattgatttatttttaaggttatgcaaaacaacttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaagga 35897643  T
Q  389 aaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||| ||  ||| | |||| | ||||| ||||||||||    |||| |||||||||||||| |||||||||||||||    
T  35897642 aaaaaaaacttataacgatacaattttcattagtgaaaa---tttataaattaacataaaagtttatttatttacata 35897568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 37329322 - 37329385
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||| |||||||||||||||||||| |||| ||||||| |||||||| ||||||| ||||    
T  37329322 gtttggatcgacttatttttgagcttatgaaaaataacttatgcaaataaataagcttttatgt 37329385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 353
Target Start/End: Complemental strand, 37431315 - 37431252
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||| | |||||| |||||||    
T  37431315 ggtctgtttggattgacttatttttgagctcatgaaaaataacttatgcgaataaataagcttt 37431252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 47413551 - 47413485
Alignment:
Q  292 tctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    ||||||||||||| |||||||||||||||||| |||| | ||||| |||||||| ||||||| ||||    
T  47413551 tctgtttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgt 47413485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 466
Target Start/End: Original strand, 13038932 - 13039084
Alignment:
Q  313 ttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatata 410  Q
    ||||| ||||| |||||  || || |||||||| ||||||| || |||| ||||| ||||| | ||| |||||| | |||||||||  |||||||||| |    
T  13038932 ttgaggttatgcaaaacggctgatgcaaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaa 13039031  T
Q  411 gttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||| ||    ||||||||||| ||||||| |||||||||| ||||    
T  13039032 gttttcgttagtgagaa---gttatgaattaatataaaagtttatttatttgcata 13039084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 466
Target Start/End: Complemental strand, 37329493 - 37329361
Alignment:
Q  333 ttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaactt 430  Q
    |||| ||||||||  |||||| ||||||| ||||||| ||| ||||| |||||| | ||||||||   |||||||||| | |||||||| |||| |||||    
T  37329493 ttatgcaaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaactt 37329394  T
Q  431 attatgaattaacataaaagcttatttatttacata 466  Q
    || |   |||||||||||||||||||||||| ||||    
T  37329393 ataa---attaacataaaagcttatttatttgcata 37329361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 353
Target Start/End: Original strand, 26946012 - 26946072
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||||||||||||||||||||||||||||| ||| || |||||  ||||||| |||||||    
T  26946012 ctgtttggattgacttatttttgagcttatgaaaatcagcttatgtaaataaacaagcttt 26946072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 26542939 - 26543006
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    |||||||||||||||||||  ||||| || ||||||||||||| |||||||| | ||||| |||||||    
T  26542939 tgtttggattgacttatttgagagctgatataaaacaacttatgcaaataaatatgcttttatgtatt 26543006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 28690180 - 28690117
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||||||| |||||||||||||| |||| | ||||| |||||||| ||||||| ||||    
T  28690180 gtttggattgacttgtttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgt 28690117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 391135 - 391193
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    |||||||||| |||||||||||| ||||| |||||| ||||| |||||||| |||||||    
T  391135 gtttggattggcttatttttgaggttatgcaaaacagcttatgcaaataaataagcttt 391193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 490
Target Start/End: Original strand, 38781181 - 38781239
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacatagcttaaaaataagtcaatcaaaac 490  Q
    |||||||||||||||||||| ||||||||| |||| || ||||||||| ||||| ||||    
T  38781181 ttatgaattaacataaaagcatatttatttgcataactcaaaaataagccaatccaaac 38781239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 41196621 - 41196675
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagc 350  Q
    ||||||||| ||||||||||||||||||||||| | ||||| |||||||| ||||    
T  41196621 tttggattggcttatttttgagcttatgtaaaatagcttatgcaaataaataagc 41196675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 285 - 358
Target Start/End: Original strand, 10849966 - 10850039
Alignment:
Q  285 tataaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||| |||| ||||| |||||||||||||| | |||||| |||| ||||||| |||||||| ||||||| ||||    
T  10849966 tatagggtccgtttgaattgacttattttttaacttatgaaaaataacttatacaaataaataagctttcatgt 10850039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 488
Target Start/End: Original strand, 31378809 - 31378854
Alignment:
Q  444 ataaaagcttatttatttacata-gcttaaaaataagtcaatcaaa 488  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  31378809 ataaaagcttatttatttgcataagcttaaaaataagtcaatcaaa 31378854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 361
Target Start/End: Complemental strand, 37148211 - 37148146
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    ||||||||||||||||||  |||||||| ||| || ||||| |||||||| |||| ||||||||||    
T  37148211 tttggattgacttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtatt 37148146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 361
Target Start/End: Complemental strand, 37157036 - 37156971
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    ||||||||||||||||||  |||||||| ||| || ||||| |||||||| |||| ||||||||||    
T  37157036 tttggattgacttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtatt 37156971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 37712245 - 37712180
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    ||||||||||||||||||||||||||||| | |||| | ||||| |||||||| || |||| ||||    
T  37712245 ctgtttggattgacttatttttgagcttacgaaaaatagcttatgcaaataaataaacttttatgt 37712180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 466
Target Start/End: Complemental strand, 46689651 - 46689499
Alignment:
Q  313 ttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaa-aaaacaatgtatgaagatata 410  Q
    ||||||||||| ||||||  |||| |||||||| ||||||| || |||| ||||| ||||| | ||| || ||| ||| |||||||  |||||| ||| |    
T  46689651 ttgagcttatgcaaaacagtttatgcaaataaaaaagcttttatttattattcatgagcttgttaaggtattttataataaaacaacttatgaaaataaa 46689552  T
Q  411 gttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
     ||||||||||||| |||   ||||||||||| |||| || |||||||||| ||||    
T  46689551 attttcgttagtgagaac---ttatgaattaatataatagtttatttatttgcata 46689499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 6900689 - 6900637
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    ||||||||||||||||| ||||||| ||||| ||||| |||||| ||||||||    
T  6900689 ctgtttggattgacttacttttgagattatgcaaaacgacttatgcaaataaa 6900637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 466
Target Start/End: Complemental strand, 16889041 - 16888915
Alignment:
Q  338 caaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattat 435  Q
    |||||||| ||||||| ||||||| ||||||||||| | ||| |||||| | ||||||||   |||||||||| | ||||| ||||||| || ||||       
T  16889041 caaataaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgagaatttat--- 16888946  T
Q  436 gaattaacataaaagcttatttatttacata 466  Q
    || ||||||||||||||||||||||| ||||    
T  16888945 gacttaacataaaagcttatttatttgcata 16888915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 26988325 - 26988261
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||||||||||||||||||||||| |||| |  |||| ||||||||  |||||| ||||    
T  26988325 tgtttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaattagcttttatgt 26988261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 46473061 - 46473231
Alignment:
Q  295 gtttggattga-cttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaa 391  Q
    ||||||||||| |||||||| ||||||||| |||||| ||| |  ||||||| ||||||| || |||| ||||| || || | ||| |||| | | ||||    
T  46473061 gtttggattgagcttatttt-gagcttatgcaaaacagcttgtgtaaataaataagcttttatttattattcatgaggtttttaaggtagtatatgaaaa 46473159  T
Q  392 aacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||  |||||||||| ||||||||||| | | |||||||   ||||||| |||||| ||||||||||| ||||    
T  46473160 aacaacttatgaagataaagttttcgttaataagaacttat---gaattaatataaaatcttatttatttgcata 46473231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 46500910 - 46500973
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||||||||||||| | |||||  |||| ||||||| |||||||| ||||||| ||||    
T  46500910 gtttggattgacttattttttatcttataaaaaataacttatgcaaataaataagcttttatgt 46500973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 432
Target Start/End: Complemental strand, 49738408 - 49738281
Alignment:
Q  307 ttatttttgagcttatgtaaaacaacttattcaaataaagaa-gctttaatgtatt-ttcataagcttatcaagatagtttctaaaaaacaatgtatgaa 404  Q
    ||||||||||| ||||| |||||||| |||  ||||||| || | ||| ||| ||| |||||||| || |||| ||||||| | ||||| ||| ||||||    
T  49738408 ttatttttgagtttatgcaaaacaacatatgaaaataaaaaaagtttttatgaattattcataagtttgtcaaaatagtttgttaaaaaaaatttatgaa 49738309  T
Q  405 gatatagttttcgttagtgaaaacttat 432  Q
     ||| | ||||||||||||| |||||||    
T  49738308 aatacaattttcgttagtgagaacttat 49738281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 16225476 - 16225542
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    ||||||||||||||||||| ||||||||| ||||||  ||||  ||||||| ||| ||| |||||||    
T  16225476 gtttggattgacttattttagagcttatgcaaaacagtttatgtaaataaataagtttttatgtatt 16225542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 20169247 - 20169297
Alignment:
Q  311 ttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    ||||||||||||| |||||| ||||| |||||||| ||||||| |||||||    
T  20169247 ttttgagcttatgaaaaacagcttatgcaaataaataagcttttatgtatt 20169297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 37569709 - 37569651
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||| |||||||||||||| | ||||||||||| || |||| |||||||| |||||||    
T  37569709 gtttgaattgacttattttttaacttatgtaaaataatttatacaaataaataagcttt 37569651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 323
Target Start/End: Original strand, 45267444 - 45267474
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatg 323  Q
    |||||||||||||||||||||||||||||||    
T  45267444 ctgtttggattgacttatttttgagcttatg 45267474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 368
Target Start/End: Original strand, 1565285 - 1565357
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttcataa 368  Q
    |||||||||| |||||||||||||||||| |||| | ||| | |||||||| ||||||| ||||  ||||||||    
T  1565285 gtttggattggcttatttttgagcttatgaaaaatagctt-tgcaaataaataagcttttatgttatttcataa 1565357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 324
Target Start/End: Original strand, 7145210 - 7145239
Alignment:
Q  295 gtttggattgacttatttttgagcttatgt 324  Q
    ||||||||||||||||||||||||||||||    
T  7145210 gtttggattgacttatttttgagcttatgt 7145239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 42591455 - 42591519
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||| | ||||||||||||||| ||||| |   ||||| |||||| ||||||||||||||||    
T  42591455 tatgaagatacacttttcgttagtgaaagcttataa---attaaaataaaaacttatttatttacata 42591519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 47413445 - 47413509
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||| |||  ||| |||||||   ||||| ||||||||||||||||||||||||| ||||    
T  47413445 tatgaagatataatttgtgttggtgaaaa---attataaattaacataaaagcttatttatttgcata 47413509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 352
Target Start/End: Original strand, 1321510 - 1321566
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctt 352  Q
    |||||||||||||||||||||||||| | ||||   ||||| |||||||| ||||||    
T  1321510 tttggattgacttatttttgagcttacgcaaaatggcttatgcaaataaataagctt 1321566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 6337812 - 6337856
Alignment:
Q  442 acataaaagcttatttatttacat-agcttaaaaataagtcaatc 485  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||    
T  6337812 acataaaagcttatttatttacataagctctaaaataagtcaatc 6337856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 35276020 - 35275968
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||||||  |||||||| |||||||| ||||||| ||||| ||||||||    
T  35276020 ctgtttggattaccttattttagagcttatataaaacagcttatacaaataaa 35275968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 41576408 - 41576344
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||| |||| |||||||| |||||| |||  ||||||||||||| |||||||||| ||||    
T  41576408 tatgaagatataatttttgttagtgataactta-tat--attaacataaaagtttatttatttgcata 41576344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 49971208 - 49971268
Alignment:
Q  285 tataaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||| ||| ||||| ||||  |||||||| ||||||||| |||||||||||| ||||||||    
T  49971208 tatagggtttgtttagattagcttattttagagcttatgcaaaacaacttatgcaaataaa 49971268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 296 - 466
Target Start/End: Original strand, 32131408 - 32131577
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaa 393  Q
    |||||||||||||||||||||||||||| |||||| ||||| |||||||| ||||||| ||| ||| ||| |||| || ||||| |||||| | || |||    
T  32131408 tttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaataaa 32131507  T
Q  394 caatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||  |||||||||| | |||||  |||||| |||   |||||||||||||||||||||||| ||||| ||||    
T  32131508 caacctatgaagatacaattttcaatagtgagaac---ttatgaattaacataaaagcttatctatttgcata 32131577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 34286638 - 34286513
Alignment:
Q  339 aaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatga 437  Q
    ||||||| ||||||| ||||||| ||||||||||| ||||| |||||| | |||||||   |||||||||| | |||||||||| || |||||||   ||    
T  34286638 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtgaaaaacagcttatgaagatacaattttcgttagggagaacttat---ga 34286542  T
Q  438 attaacataaaagcttatttatttacata 466  Q
    ||||| |||||||||||||||||| ||||    
T  34286541 attaatataaaagcttatttatttgcata 34286513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 295 - 461
Target Start/End: Complemental strand, 19925507 - 19925343
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaaaa 393  Q
    ||||||||||||||||||| ||||||||| | ||||  |||| |||||||| |||| |||||||||| || |||| ||| | ||| |||||   ||| ||    
T  19925507 gtttggattgacttattttagagcttatgcataacagtttatgcaaataaataagcattaatgtattatttataaacttgttaaggtagttatgaaataa 19925408  T
Q  394 caatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    |||  |||||| ||| | |||||||||||   ||  ||||||||||||||||||||||||| ||||||    
T  19925407 caacttatgaatatacaattttcgttagt---aagatattatgaattaacataaaagcttaattattt 19925343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 25333714 - 25333650
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||| | |||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  25333714 tatgaagatacaattttcgttagtgaaaacttat---gaattaacataaaagcttatttatttacata 25333650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 492
Target Start/End: Complemental strand, 35168508 - 35168360
Alignment:
Q  347 aagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaaca 444  Q
    ||||||| ||||||| ||||||||||| ||||| |||||| | |||||||| | |||||||||| | ||||||| ||| | ||    ||||||||||||     
T  35168508 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattttcgtcagttagaagaacttatgaattaact 35168409  T
Q  445 taaaagcttatttatttacat-agcttaaaaataagtcaatcaaaacgg 492  Q
    |||||||| |||||||||||| |||| ||||||||| ||||| ||||||    
T  35168408 taaaagctgatttatttacataagctcaaaaataagccaatccaaacgg 35168360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 293 - 461
Target Start/End: Original strand, 14942389 - 14942556
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaa 390  Q
    |||||||||||| |||||||| ||||||||||||||||||||||  | ||||| |||||||  |||||| || |||||||| | ||| |||||| | |||    
T  14942389 ctgtttggattggcttattttagagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaa 14942488  T
Q  391 aaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    |||| |  |||||||||  | |||| |||||  | |||   |||| ||||||||||||| |||||||||||    
T  14942489 aaacgacttatgaagatgcaatttttgttagcaagaac---ttataaattaacataaaaccttatttattt 14942556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 466
Target Start/End: Complemental strand, 42363440 - 42363266
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct- 387  Q
    |||| |||||||||  |||||||| |||||||| ||||| | ||||| |||||||| ||| ||| ||||||| || ||||| || | ||| |||||| |     
T  42363440 ggtccgtttggattagcttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatg 42363342  T
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||  | |||||||||| | |||| |||||||| ||||| |||  |||||| |||||||||||||||||||||||    
T  42363341 aaaaaaccgtttatgaagatacaatttttgttagtgagaactt-tta--aattaaaataaaagcttatttatttacata 42363266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 332 - 466
Target Start/End: Original strand, 32975691 - 32975824
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaaa-acaatgtatgaagatatagttttcgttagtgaaaact 429  Q
    ||||| |||||||| ||||||| || |||| ||||||||||| ||||| |||||| | |||| ||||  |||||||||| | |||| ||| |||| ||||    
T  32975691 cttatgcaaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgagaact 32975790  T
Q  430 tattatgaattaacataaaagcttatttatttacata 466  Q
    |||   ||||||| |||||||||||||||||| ||||    
T  32975791 tat---gaattaatataaaagcttatttatttgcata 32975824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 345
Target Start/End: Complemental strand, 2019775 - 2019718
Alignment:
Q  288 aaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||| ||||||||||||||||||| ||||||||| |||||| ||||| ||||||||    
T  2019775 aaggtccgtttggattgacttattttagagcttatgcaaaacatcttatgcaaataaa 2019718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 353
Target Start/End: Original strand, 24087111 - 24087164
Alignment:
Q  300 gattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||    
T  24087111 gattgacttgtttttgagcttatgcaaaagaacttatgcaaataaagaagcttt 24087164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 466
Target Start/End: Complemental strand, 25465891 - 25465796
Alignment:
Q  368 agcttatcaagatagtttctaaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||| |||||  ||||| | ||||||||  |||||||||| | |||| |||| |||||||||||   |||||||||||||||||||||||||| ||||    
T  25465891 agcttgtcaaggaagtttatgaaaaacaacttatgaagatacaatttttgttactgaaaacttat---gaattaacataaaagcttatttatttgcata 25465796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 28879231 - 28879168
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||||||||||||| |||||||| |||| | ||||| |||||||| ||||||| ||||    
T  28879231 gtttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 28879168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 30973956 - 30974126
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    |||||||||| |||||||| ||||||||| ||| || |||||  |||||||||||| |||||||||| || ||||  || | |||  ||||| | |||||    
T  30973956 gtttggattggcttattttagagcttatgcaaagcagcttatgtaaataaagaagcattaatgtattatttataaatttgttaaggcagtttatgaaaaa 30974055  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||  ||||||  || | |||||||||||   ||  | |||||||||| ||||||||||||||||||| ||||    
T  30974056 acaacttatgaatttacaattttcgttagt---aagatcttatgaattagcataaaagcttatttatttgcata 30974126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 466
Target Start/End: Complemental strand, 38338969 - 38338800
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    |||||||||  |||||||| |||||||| ||||||| ||||| |||||||| ||| ||| |  |||| || ||||| || | ||| |||||| | |||||    
T  38338969 gtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttaaatattatttataagttttt-aaggtagtttatgaaaaa 38338871  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    | | | |||||||||||  ||||||||||||| ||||||| |   ||||| |||||| ||||||||||||||||    
T  38338870 atagtttatgaagatatgattttcgttagtgagaacttataa---attaaaataaaaacttatttatttacata 38338800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 466
Target Start/End: Complemental strand, 25671888 - 25671839
Alignment:
Q  414 ttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||||||||||||||||| |   |||||||||||||||||||||||||||||    
T  25671888 ttcgttagtgaaaacttataa---attaacataaaagcttatttatttacata 25671839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 327
Target Start/End: Complemental strand, 34286670 - 34286636
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaa 327  Q
    |||||||||||||||||||||||||||||||||||    
T  34286670 ctgtttggattgacttatttttgagcttatgtaaa 34286636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 432 - 465
Target Start/End: Original strand, 8752909 - 8752942
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacat 465  Q
    ||||||||||||||||||||||||||||||||||    
T  8752909 ttatgaattaacataaaagcttatttatttacat 8752942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 10213875 - 10213814
Alignment:
Q  291 gtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctt 352  Q
    ||||||||||||||  ||||||||||||||||| |||| | ||||| |||||||| ||||||    
T  10213875 gtctgtttggattggattatttttgagcttatgaaaaatagcttatgcaaataaataagctt 10213814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 24350532 - 24350468
Alignment:
Q  399 tatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||| ||||||||||| | |||||||   |||||||||||||| ||||||||||| ||||    
T  24350532 tatgaagatataattttcgttagtaagaacttat---gaattaacataaaatcttatttatttgcata 24350468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 332 - 466
Target Start/End: Original strand, 28879062 - 28879192
Alignment:
Q  332 cttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaa-aacaatgtatgaagatatagttttcgttagtgaaa--a 427  Q
    ||||| |||||||| ||||||| ||||||| ||||||||||| ||||| |||||| | ||| |||||  |||||||||     ||| ||||||||||  |    
T  28879062 cttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaataacaacttatgaagat-----ttttgttagtgaaagaa 28879156  T
Q  428 cttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||   |||||||||||||||||||||||||| ||||    
T  28879157 cttat---gaattaacataaaagcttatttatttgcata 28879192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 34286619 - 34286668
Alignment:
Q  442 acataaaagcttatttatttacat-agcttaaaaataagtcaatcaaaac 490  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  34286619 acataaaagcttatttatttacataagctcaaaaataagtcaatccaaac 34286668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 432
Target Start/End: Complemental strand, 25333776 - 25333712
Alignment:
Q  368 agcttatcaagatagtttctaaaaaacaatgtatgaagatatagttttcgttagtgaaaacttat 432  Q
    ||||| ||||| |||||| | ||||||||  |||||||||| | |||||||||||||||||||||    
T  25333776 agcttgtcaaggtagtttatgaaaaacaacttatgaagatacaattttcgttagtgaaaacttat 25333712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 32213078 - 32213122
Alignment:
Q  442 acataaaagcttatttatttacat-agcttaaaaataagtcaatc 485  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  32213078 acataaaagcttatttatttgcataagcttaaaaataagtcaatc 32213122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 35055484 - 35055558
Alignment:
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||||| || |||||||||| | ||||||||||||| | |||||   ||||||| |||||||||||||||||||||||    
T  35055484 aaaaaaccatttatgaagatacaattttcgttagtgagagcttat---gaattaa-ataaaagcttatttatttacata 35055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 13131619 - 13131556
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||||||||||||| |||||||| |||| | | ||| |||||||| ||||||| ||||    
T  13131619 gtttggattgacttatttttaagcttatgaaaaatagcatatgcaaataaataagcttttatgt 13131556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 461
Target Start/End: Complemental strand, 32924236 - 32924167
Alignment:
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattt 461  Q
    |||||||||  |||||||||| | ||||| |||||||||||||||   ||||||| ||||||||||||||||||    
T  32924236 aaaaaacaacttatgaagataaaattttc-ttagtgaaaacttat---gaattaatataaaagcttatttattt 32924167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Original strand, 2669751 - 2669785
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  2669751 ttatgaattaacataaaagcttatttattttcata 2669785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 11460824 - 11460782
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttatt 337  Q
    ||||||||||||||||||||||||||||| |||| | ||||||    
T  11460824 gtttggattgacttatttttgagcttatgaaaaatagcttatt 11460782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 328
Target Start/End: Complemental strand, 11460880 - 11460846
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaa 328  Q
    |||||||||||||||||||||||||||||| ||||    
T  11460880 tgtttggattgacttatttttgagcttatgaaaaa 11460846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 34286474 - 34286532
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||| ||||||||||||||||||||||| |||| |  |||| |||||||| |||||||    
T  34286474 gtttgaattgacttatttttgagcttatgaaaaataggttatgcaaataaataagcttt 34286532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 38195454 - 38195504
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||||  |||||||| |||||||| ||||||||||||| ||||||||    
T  38195454 gtttggattagcttattttagagcttatataaaacaacttatgcaaataaa 38195504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 461
Target Start/End: Complemental strand, 2019623 - 2019594
Alignment:
Q  432 ttatgaattaacataaaagcttatttattt 461  Q
    ||||||||||||||||||||||||||||||    
T  2019623 ttatgaattaacataaaagcttatttattt 2019594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 492
Target Start/End: Complemental strand, 9131000 - 9130939
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacat-agcttaaaaataagtcaatcaaaacgg 492  Q
    ||||||||||||||||||| |||||||||| ||| |||| ||||  ||||||||| ||||||    
T  9131000 ttatgaattaacataaaagtttatttatttgcataagctcaaaatcaagtcaatccaaacgg 9130939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 16972263 - 16972316
Alignment:
Q  292 tctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||||||||||||| ||||||||||||  |||| | ||||| ||||||||    
T  16972263 tctgtttggattgacttaattttgagcttattcaaaatagcttatgcaaataaa 16972316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 361
Target Start/End: Complemental strand, 36907766 - 36907701
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    ||||||||| |||||||| ||||||||| ||| ||  |||| ||||||||||||  ||||||||||    
T  36907766 tttggattggcttattttagagcttatgcaaagcagtttatgcaaataaagaagtattaatgtatt 36907701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 19327846 - 19327909
Alignment:
Q  306 cttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataag 369  Q
    ||||||||| |||||||| |||||||||||| |||||||| || |||| ||||||| ||||||||    
T  19327846 cttattttt-agcttatgcaaaacaacttatgcaaataaataaacttttatgtattattcataag 19327909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 327
Target Start/End: Original strand, 35168362 - 35168394
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaa 327  Q
    |||||||||| ||||||||||||||||||||||    
T  35168362 gtttggattggcttatttttgagcttatgtaaa 35168394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 492
Target Start/End: Complemental strand, 25430882 - 25430688
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttcataagcttatcaagatagtttct--aaaaa 392  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| || |||||  ||||||||||| ||||| |||||| |  |||||    
T  25430882 gtttggattgacttatttttgagcttatgtaaaacagcttatacaaataaataagcatttatgta--ttcataagcttgtcaaggtagtttatgaaaaaa 25430785  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacat-agcttaaaaataagtcaatcaaaacg 491  Q
    |||   |||||||||| | |||| || ||||| ||   ||||||||||||  |||||| |||||| ||| ||| ||||  |||||||| ||||| |||||    
T  25430784 acagcttatgaagatacaatttt-gtcagtgagaa---attatgaattaaggtaaaagtttatttctttgcataagctacaaaataagccaatccaaacg 25430689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 10687274 - 10687447
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt----ttcataagcttatcaagatagtttct-aa 389  Q
    |||| ||||||| |||||||||||||||  |||||| ||||| |||||||| ||||||| |||||||    ||||||||| ||| ||| |||||| |  |    
T  10687274 gtttcgattgacgtatttttgagcttattcaaaacagcttatgcaaataaataagctttgatgtatttttattcataagcctattaaggtagtttatgta 10687373  T
Q  390 aaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||  |||| ||||| | |||||||||| || |||   ||||||| | |||||||||||||||||||| ||||    
T  10687374 aaaacaacttatggagatacaattttcgttagcgagaac---ttatgaactgacataaaagcttatttatttgcata 10687447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 292 - 482
Target Start/End: Original strand, 10873949 - 10874138
Alignment:
Q  292 tctgtttggattgacttattttt-gagcttatgtaaaacaacttattcaaataaagaagctttaatgtattttcataagcttatcaagatagtttctaa- 389  Q
    ||||||||||||| ||||||||| ||| ||||| |||| | ||||| || ||||| ||||||| || | | || |||||||| | ||| |||||| | |     
T  10873949 tctgtttggattggcttattttttgagattatgcaaaatagcttatgcatataaataagcttttatat-tattaataagcttgttaaggtagtttatgag 10874047  T
Q  390 aaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacat-agcttaaaaataagtca 482  Q
    ||||||   |||||||||| | |||| ||| ||||||||||||   |||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  10874048 aaaacagcttatgaagatacaattttagttggtgaaaacttat---gaattaacataaaagcttatttatttgcataagctaaaaaataagtca 10874138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 466
Target Start/End: Original strand, 2255719 - 2255871
Alignment:
Q  313 ttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtat-tttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatata 410  Q
    ||||||||||| ||||| |||||| ||||||||  |||||| ||||||  ||||||||||| | ||| || ||| | ||||||||   |||||||||| |    
T  2255719 ttgagcttatgcaaaacgacttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagataca 2255818  T
Q  411 gttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
     |||| | |||||| |||    ||||||||||||||||||||||||||||||||||    
T  2255819 atttttggtagtgagaac---atatgaattaacataaaagcttatttatttacata 2255871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 462
Target Start/End: Complemental strand, 10184456 - 10184283
Alignment:
Q  287 taaggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    |||||||||||||||||  |||||||| |||||||| ||||||| |||||  ||||||| ||| ||| || |||| || ||||| || | ||| ||||||    
T  10184456 taaggtctgtttggattagcttattttagagcttatataaaacagcttatgtaaataaataagtttttatctattatttataag-tttttaaggtagttt 10184358  T
Q  386 ct-aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttattta 462  Q
     | |||||||||| |||||||| | | ||||||||||| | | |   |||| |||||| |||||||||||||||||||    
T  10184357 atgaaaaaacaatttatgaagaaacaattttcgttagtaagagc---ttataaattaaaataaaagcttatttattta 10184283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 23239214 - 23239384
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    ||||||||||| ||  ||||||||||||| |||| ||||||| |||||||| ||||||| || |||| ||||||||||| | ||  | |||| | |||||    
T  23239214 gtttggattgagtttattttgagcttatgaaaaataacttatacaaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaa 23239313  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
     |||  ||||| |||| |  |||| ||||||| |||   ||||||||||| |||||||||||||||||| ||||    
T  23239314 gcaaattatgacgatacaactttccttagtgagaac---ttatgaattaatataaaagcttatttatttgcata 23239384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 7267960 - 7267895
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||||| ||||||||| |||||||| | |||||||||| |||||||| ||||||| ||||    
T  7267960 ctgtttggattggcttatttttaagcttatgaataacaacttatgcaaataaataagcttttatgt 7267895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 456
Target Start/End: Complemental strand, 21891457 - 21891297
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaa 392  Q
    ||||||||||| | ||||||||||||||| | || | ||||| |||||||| ||| ||| || |||| ||||||||||| ||||  |||||| | ||| |    
T  21891457 gtttggattgattaatttttgagcttatgcagaatagcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtttatgaaata 21891358  T
Q  393 acaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatt 456  Q
    ||||  |||||||||| | |||||||| |  | |||   |||||||||||||||||||||||||    
T  21891357 acaacttatgaagatagaattttcgttcgcaagaac---ttatgaattaacataaaagcttatt 21891297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 361
Target Start/End: Complemental strand, 3211125 - 3211054
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    ||||||||||||| | ||||||||| ||||| || |||||| ||||| |||||||| ||||||| |||||||    
T  3211125 ggtctgtttggatcggcttattttttagcttgtgcaaaacagcttatgcaaataaataagcttttatgtatt 3211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 466
Target Start/End: Complemental strand, 12816902 - 12816850
Alignment:
Q  412 ttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||||||| ||||    
T  12816902 ttttcgttagtgagaactta--atgaattaacataaaagcttatttatttgcata 12816850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 466
Target Start/End: Original strand, 8014757 - 8014925
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaa 393  Q
    ||||||||| |||||||| ||| ||||  |||||| ||||| |||||||  ||||||| ||  ||| ||||||||||| ||||| |||||| | ||||||    
T  8014757 tttggattggcttatttt-gagtttatagaaaacagcttatgcaaataagtaagcttttattcattattcataagcttgtcaaggtagtttatgaaaaaa 8014855  T
Q  394 caatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |    |||||||||| | |||| ||||||||||||| || |   ||||||||||||||||||| |||| ||||    
T  8014856 ctgcatatgaagatacaattttggttagtgaaaactgataa---attaacataaaagcttattaatttgcata 8014925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 12816809 - 12816874
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    ||||||||||| ||||||||||||||||||| |||| |  |||| |||||||| ||||||| ||||    
T  12816809 ctgtttggattaacttatttttgagcttatgaaaaatagtttatgcaaataaataagcttttatgt 12816874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 292 - 361
Target Start/End: Complemental strand, 21871405 - 21871336
Alignment:
Q  292 tctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    |||||||||||||  |||||||| || |||||||||||||||||| |||||||  || |||| |||||||    
T  21871405 tctgtttggattggtttattttttagtttatgtaaaacaacttatgcaaataagtaaacttttatgtatt 21871336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 385
Target Start/End: Original strand, 24625816 - 24625909
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagttt 385  Q
    |||||||||||| |||||||||||| ||| | || ||||| ||| |||||||| | ||||| ||||||| ||||||||||| | ||| ||||||    
T  24625816 ctgtttggattgtcttatttttgaggttaggcaagacaacatatgcaaataaatacgcttttatgtattattcataagcttgttaaggtagttt 24625909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 313 - 466
Target Start/End: Complemental strand, 29623578 - 29623427
Alignment:
Q  313 ttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatata 410  Q
    ||||||||||| |||||||||||| |||||||| || |||| || |||| || || || || | ||  |||||| | |||||||||  |||||| ||| |    
T  29623578 ttgagcttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaaaataaa 29623479  T
Q  411 gttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||| |||   |||||||||||||| ||| ||||||||||| ||||    
T  29623478 gttttcgttagtgagaac---ttatgaattaacat-aaatcttatttatttgcata 29623427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 35071336 - 35071401
Alignment:
Q  293 ctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||||||||| ||||||||| |||||||| |||| | ||||| |||||||| ||||||| ||||    
T  35071336 ctgtttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 35071401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 9764300 - 9764364
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||||| |||||||||||||||| |||||| |||| || |||| |||||||| ||||||| ||||    
T  9764300 tgtttgcattgacttatttttgaacttatgaaaaataatttatgcaaataaataagcttttatgt 9764364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 6632625 - 6632692
Alignment:
Q  294 tgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    ||||||||||  |||||||| ||||||||  |||||||||||| |||||||| | ||||| |||||||    
T  6632625 tgtttggattagcttattttagagcttattcaaaacaacttatgcaaataaatatgcttttatgtatt 6632692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 292 - 373
Target Start/End: Original strand, 1172300 - 1172382
Alignment:
Q  292 tctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagctta 373  Q
    |||||||||||||||||| ||||||||||||  |||| | | |||| | |||||  |||||| ||||||| ||||||||||||    
T  1172300 tctgtttggattgacttacttttgagcttatacaaaatagcatatttagataaatgagcttttatgtattattcataagctta 1172382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 3210972 - 3210938
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  3210972 ttatgaattaacataaaagcttatttatttgcata 3210938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 466
Target Start/End: Original strand, 6758612 - 6758765
Alignment:
Q  313 ttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttct-aaaaaacaatgtatgaagatata 410  Q
    ||||||||||| |||||||||||| |||||||| |||||||  | |||| | ||||||||| | ||| |||||| | |||||  ||  ||| |||||| |    
T  6758612 ttgagcttatgcaaaacaacttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaagataca 6758711  T
Q  411 gttttcgttagtgaaaacttattatgaattaacat-aaaagcttatttatttacata 466  Q
      |||||||||||| |||   ||||||||||| || |||||||||||||||| ||||    
T  6758712 aatttcgttagtgagaac---ttatgaattaatataaaaagcttatttatttgcata 6758765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 9201704 - 9201670
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  9201704 ttatgaattaacataaaagcttatttatttgcata 9201670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 9202382 - 9202348
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    ||||||||||||||||||||||||||||| |||||    
T  9202382 ttatgaattaacataaaagcttatttattaacata 9202348  T

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Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 10755194 - 10755256
Alignment:
Q  296 tttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    ||||||||||||||||||||||||| || |||| |  |||| |||||||| ||||||| ||||    
T  10755194 tttggattgacttatttttgagcttctgaaaaatagtttatgcaaataaataagcttttatgt 10755256  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 10755266 - 10755232
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  10755266 ttatgaattaacataaaagcttatttatttgcata 10755232  T

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Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 11795527 - 11795577
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||||||||||||| |||||||||| ||||||  |||| ||||||||    
T  11795527 gtttggattgacttatttctgagcttatgcaaaacagattatgcaaataaa 11795577  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 35071411 - 35071377
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  35071411 ttatgaattaacataaaagcttatttatttgcata 35071377  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 345
Target Start/End: Original strand, 10619202 - 10619246
Alignment:
Q  301 attgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    ||||||||||||| ||||||||||||| || ||||| ||||||||    
T  10619202 attgacttattttagagcttatgtaaagcagcttatgcaaataaa 10619246  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 20776528 - 20776480
Alignment:
Q  297 ttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||| ||||||||||||| |||| |||| ||||||| ||||||||    
T  20776528 ttggattggcttatttttgagcatatgaaaaataacttatgcaaataaa 20776480  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 32165285 - 32165210
Alignment:
Q  388 aaaaaacaatgtatgaagatatagttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    |||||||| | |||||||||| | ||||||||||||| | ||||| |   ||||| |||||| ||||||||||||||||    
T  32165285 aaaaaacagtttatgaagatacaattttcgttagtgagagcttataa---attaaaataaaaacttatttatttacata 32165210  T

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Target: scaffold0191 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 353
Target Start/End: Complemental strand, 31289 - 31246
Alignment:
Q  310 tttttgagcttatgtaaaacaacttattcaaataaagaagcttt 353  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  31289 tttttgagcttatgtaaaacaacttatgcaaataaataagcttt 31246  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 361
Target Start/End: Original strand, 178462 - 178533
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt 361  Q
    |||| ||||||||| |||||||||||| |||||   ||||||||||| |||||||| ||||||| |||||||    
T  178462 ggtccgtttggattaacttatttttgaacttatactaaacaacttatgcaaataaataagcttttatgtatt 178533  T

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Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 466
Target Start/End: Complemental strand, 24490 - 24338
Alignment:
Q  312 tttgagcttatgtaaaacaacttattcaaataaagaagctttaatgtatt-ttcataagcttatcaagatagtttctaaaa-aacaatgtatgaagatat 409  Q
    ||||||||| |  |||||| ||||| |||||||| | ||||  ||||||| ||||||||||| ||||| |||||  ||||| |||||  || ||||||||    
T  24490 tttgagcttctacaaaacagcttatgcaaataaata-gcttgtatgtattattcataagcttgtcaaggtagttgataaaataacaacttacgaagatat 24392  T
Q  410 agttttcgttagtgaaaacttattatgaattaacataaaagcttatttatttacata 466  Q
    | ||||||||||| |||||   || ||||||| ||||||||| ||||||||| ||||    
T  24391 aattttcgttagtaaaaac---ttgtgaattatcataaaagcctatttatttgcata 24338  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 97116 - 97166
Alignment:
Q  295 gtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaa 345  Q
    |||||||||||||||||||||||||| || |||||| || || ||||||||    
T  97116 gtttggattgacttatttttgagcttttgcaaaacagctaatgcaaataaa 97166  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 48611 - 48577
Alignment:
Q  432 ttatgaattaacataaaagcttatttatttacata 466  Q
    |||||||||||||||||||||||||||||| ||||    
T  48611 ttatgaattaacataaaagcttatttatttgcata 48577  T

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Target: scaffold1088 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 1267 - 1308
Alignment:
Q  301 attgacttatttttgagcttatgtaaaacaacttattcaaat 342  Q
    ||||||||||||| ||||||||| |||||||||||| |||||    
T  1267 attgacttattttagagcttatgcaaaacaacttatgcaaat 1308  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 24928 - 24860
Alignment:
Q  290 ggtctgtttggattgacttatttttgagcttatgtaaaacaacttattcaaataaagaagctttaatgt 358  Q
    |||| |||||||||| |||||||||||||||||| |||  | ||||| |||||||| ||| ||| ||||    
T  24928 ggtccgtttggattgtcttatttttgagcttatgaaaagtagcttatgcaaataaataagtttttatgt 24860  T

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