View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3041_high_13 (Length: 295)
Name: NF3041_high_13
Description: NF3041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3041_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 7 - 287
Target Start/End: Original strand, 44842936 - 44843216
Alignment:
| Q |
7 |
ctttaagagttccagttcacttaaccattctccatcaaacattcttttgagttgatgaatcaaaacggagagtgtttccatgtgtttatcaagtatagat |
106 |
Q |
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| T |
44842936 |
ctttaagagttccagttcacttaaccattctccatcaaacattcttttgagttgatgaataaaaacggagagtgtgtccatgtgtttatcaagtatagat |
44843035 |
T |
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| Q |
107 |
aatggagtattctgagataataactctagcaagtcatagagattaaagtatacttgtagacggaagtcatcgtcattccaagccaattctgaacgaaaac |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
44843036 |
aatggagtattctgagataataactctagcaagtcatagagattaaagtatacttgtagacggaagtcgtcgtcattccaagccaattctgaacgaaaac |
44843135 |
T |
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| Q |
207 |
gcctgtctcgatcgtcagtggagagaaagttggcgatagtctcagccttttcagcagtgaaagctagcatgtttattctgt |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44843136 |
gcctgtctcgatcgtcagtggagagaaagttggcgatagtctcagccttttcagcagtgaaagctagcatgtttattctgt |
44843216 |
T |
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