View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3042_high_7 (Length: 401)

Name: NF3042_high_7
Description: NF3042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3042_high_7
NF3042_high_7
[»] chr5 (68 HSPs)
chr5 (101-401)||(19514717-19515017)
chr5 (104-401)||(21207229-21207525)
chr5 (101-398)||(43463952-43464245)
chr5 (101-401)||(26570729-26571029)
chr5 (101-398)||(22729008-22729300)
chr5 (101-378)||(37780524-37780796)
chr5 (101-398)||(25940521-25940824)
chr5 (101-398)||(37610386-37610671)
chr5 (104-379)||(30401885-30402161)
chr5 (101-399)||(26570914-26571218)
chr5 (101-233)||(12498850-12498982)
chr5 (101-401)||(10098519-10098813)
chr5 (104-398)||(10098699-10098991)
chr5 (101-233)||(19514525-19514658)
chr5 (101-233)||(12498567-12498698)
chr5 (101-230)||(34147435-34147564)
chr5 (102-230)||(22729365-22729492)
chr5 (101-230)||(3888239-3888367)
chr5 (104-230)||(2817152-2817277)
chr5 (104-233)||(3888584-3888713)
chr5 (104-278)||(11316852-11317025)
chr5 (104-276)||(43463759-43463938)
chr5 (101-233)||(34147141-34147271)
chr5 (104-233)||(41072136-41072264)
chr5 (101-192)||(37780320-37780410)
chr5 (101-192)||(37610202-37610292)
chr5 (102-212)||(25940956-25941067)
chr5 (103-229)||(2817502-2817626)
chr5 (104-192)||(11316717-11316805)
chr5 (165-233)||(25940887-25940955)
chr5 (101-178)||(18817588-18817665)
chr5 (101-213)||(42919305-42919416)
chr5 (293-397)||(43463958-43464061)
chr5 (1-40)||(25017207-25017246)
chr5 (1-40)||(34329163-34329202)
chr5 (101-178)||(11350808-11350884)
chr5 (104-177)||(11351405-11351478)
chr5 (3-40)||(13362806-13362843)
chr5 (101-178)||(18816952-18817029)
chr5 (1-37)||(16668784-16668820)
chr5 (1-37)||(18465546-18465582)
chr5 (293-401)||(22729187-22729294)
chr5 (4-40)||(42512235-42512271)
chr5 (1-40)||(2827057-2827096)
chr5 (1-40)||(23335697-23335736)
chr5 (1-40)||(28070143-28070182)
chr5 (101-151)||(16466746-16466796)
chr5 (104-178)||(31569910-31569983)
chr5 (296-401)||(19514729-19514834)
chr5 (101-153)||(18433015-18433067)
chr5 (293-401)||(21207409-21207516)
chr5 (101-153)||(25115757-25115809)
chr5 (101-153)||(25174849-25174901)
chr5 (242-278)||(25940834-25940870)
chr5 (242-278)||(34147288-34147324)
chr5 (242-278)||(37610339-37610375)
chr5 (242-278)||(37780458-37780494)
chr5 (355-401)||(3888479-3888525)
chr5 (356-398)||(41071984-41072026)
chr5 (242-278)||(3888387-3888423)
chr5 (365-401)||(11316809-11316845)
chr5 (107-155)||(16726084-16726132)
chr5 (101-153)||(18433318-18433370)
chr5 (101-153)||(25116063-25116115)
chr5 (101-153)||(25175153-25175205)
chr5 (101-153)||(26020450-26020502)
chr5 (293-329)||(41071990-41072026)
chr5 (246-278)||(41072084-41072116)
[»] chr3 (62 HSPs)
chr3 (104-401)||(27238655-27238951)
chr3 (101-401)||(40848521-40848825)
chr3 (104-401)||(26007371-26007670)
chr3 (123-401)||(24485043-24485320)
chr3 (101-398)||(48159897-48160193)
chr3 (101-398)||(36180748-36181044)
chr3 (102-398)||(22429159-22429455)
chr3 (101-401)||(44008157-44008454)
chr3 (101-278)||(42673173-42673349)
chr3 (101-230)||(40848886-40849015)
chr3 (101-230)||(48160258-48160387)
chr3 (101-278)||(10348676-10348853)
chr3 (101-233)||(47666257-47666389)
chr3 (104-398)||(53766166-53766454)
chr3 (101-228)||(53687888-53688015)
chr3 (103-233)||(22429518-22429647)
chr3 (101-389)||(42455965-42456247)
chr3 (108-233)||(3353474-3353597)
chr3 (101-233)||(27238465-27238597)
chr3 (101-233)||(42672978-42673109)
chr3 (101-233)||(44007967-44008099)
chr3 (102-233)||(10348480-10348611)
chr3 (101-230)||(36180556-36180683)
chr3 (101-229)||(3353128-3353253)
chr3 (101-233)||(26007182-26007313)
chr3 (101-225)||(24485390-24485513)
chr3 (101-230)||(53688228-53688356)
chr3 (101-230)||(47665911-47666040)
chr3 (1-62)||(17627221-17627282)
chr3 (101-233)||(53766513-53766633)
chr3 (101-216)||(21896450-21896564)
chr3 (101-217)||(8314013-8314129)
chr3 (1-40)||(50754042-50754081)
chr3 (1-40)||(52987640-52987679)
chr3 (101-150)||(42455790-42455839)
chr3 (101-153)||(20969021-20969073)
chr3 (1-40)||(7045290-7045329)
chr3 (1-40)||(16277404-16277443)
chr3 (1-40)||(19385305-19385344)
chr3 (1-40)||(51362428-51362467)
chr3 (293-398)||(53766347-53766448)
chr3 (293-391)||(40848718-40848816)
chr3 (293-398)||(26007380-26007485)
chr3 (242-278)||(22429466-22429502)
chr3 (293-401)||(24485203-24485311)
chr3 (242-278)||(44008115-44008151)
chr3 (1-40)||(8718137-8718176)
chr3 (1-40)||(9070024-9070063)
chr3 (293-336)||(36180754-36180797)
chr3 (1-40)||(39099233-39099272)
chr3 (187-230)||(42455855-42455898)
chr3 (189-230)||(21895717-21895759)
chr3 (101-153)||(1927772-1927824)
chr3 (242-278)||(3353420-3353456)
chr3 (101-153)||(8315084-8315135)
chr3 (101-153)||(10293911-10293963)
chr3 (1-37)||(23699367-23699403)
chr3 (1-37)||(23717822-23717858)
chr3 (1-37)||(23736278-23736314)
chr3 (242-278)||(36180702-36180738)
chr3 (101-153)||(47871124-47871175)
chr3 (242-278)||(48160203-48160239)
[»] scaffold0017 (3 HSPs)
scaffold0017 (102-401)||(184840-185138)
scaffold0017 (101-232)||(185197-185328)
scaffold0017 (293-397)||(185025-185129)
[»] chr4 (83 HSPs)
chr4 (102-401)||(25161879-25162176)
chr4 (101-398)||(9023438-9023734)
chr4 (101-401)||(9380497-9380795)
chr4 (101-398)||(292976-293271)
chr4 (123-398)||(12757961-12758236)
chr4 (101-401)||(39912054-39912351)
chr4 (101-233)||(292782-292914)
chr4 (101-230)||(28196698-28196827)
chr4 (101-230)||(32703575-32703704)
chr4 (101-380)||(39744030-39744308)
chr4 (101-278)||(169013-169199)
chr4 (101-233)||(28196346-28196478)
chr4 (101-233)||(39744387-39744519)
chr4 (101-230)||(4239291-4239420)
chr4 (101-229)||(9380307-9380435)
chr4 (102-232)||(43292038-43292168)
chr4 (101-230)||(169364-169493)
chr4 (101-230)||(48405962-48406090)
chr4 (101-233)||(9023244-9023376)
chr4 (101-233)||(23540174-23540306)
chr4 (101-233)||(39086545-39086677)
chr4 (104-401)||(12757770-12758075)
chr4 (101-233)||(32703225-32703357)
chr4 (115-232)||(48406308-48406425)
chr4 (101-230)||(26207671-26207800)
chr4 (101-233)||(26207361-26207492)
chr4 (101-233)||(23539841-23539971)
chr4 (101-230)||(43292284-43292411)
chr4 (123-230)||(44468849-44468955)
chr4 (123-233)||(25162235-25162345)
chr4 (101-401)||(39912234-39912540)
chr4 (101-178)||(50678779-50678856)
chr4 (293-397)||(292982-293085)
chr4 (293-397)||(9023444-9023548)
chr4 (1-40)||(637890-637929)
chr4 (1-40)||(1729605-1729644)
chr4 (1-40)||(4168394-4168433)
chr4 (1-40)||(26447402-26447441)
chr4 (104-207)||(36096423-36096526)
chr4 (101-207)||(36095817-36095922)
chr4 (101-178)||(50679401-50679478)
chr4 (101-158)||(56505693-56505750)
chr4 (293-397)||(25162064-25162167)
chr4 (1-37)||(50563719-50563755)
chr4 (1-40)||(27764276-27764315)
chr4 (1-40)||(36621691-36621730)
chr4 (299-397)||(9380513-9380610)
chr4 (355-401)||(32703416-32703462)
chr4 (242-397)||(9380455-9380610)
chr4 (101-178)||(43051229-43051306)
chr4 (242-278)||(39744334-39744370)
chr4 (355-398)||(169255-169298)
chr4 (1-40)||(22181235-22181274)
chr4 (355-398)||(28196542-28196585)
chr4 (1-40)||(38485664-38485703)
chr4 (293-336)||(43292170-43292213)
chr4 (1-40)||(45256011-45256050)
chr4 (101-151)||(39415528-39415578)
chr4 (348-398)||(43292169-43292219)
chr4 (355-401)||(48406202-48406248)
chr4 (293-330)||(169255-169292)
chr4 (104-153)||(13198606-13198655)
chr4 (364-401)||(23540029-23540066)
chr4 (245-278)||(23540122-23540155)
chr4 (293-330)||(28196548-28196585)
chr4 (293-330)||(32703425-32703462)
chr4 (356-397)||(39086392-39086433)
chr4 (104-177)||(47219179-47219252)
chr4 (101-153)||(3930482-3930533)
chr4 (5-37)||(6386535-6386567)
chr4 (102-153)||(8181992-8182044)
chr4 (101-153)||(13198908-13198960)
chr4 (101-153)||(16555819-16555871)
chr4 (101-153)||(18077204-18077256)
chr4 (101-153)||(22681881-22681933)
chr4 (242-278)||(23539987-23540023)
chr4 (101-153)||(24775785-24775837)
chr4 (11-39)||(26578189-26578217)
chr4 (242-278)||(28196642-28196678)
chr4 (293-329)||(39086397-39086433)
chr4 (242-278)||(48406110-48406146)
chr4 (105-153)||(49178818-49178866)
chr4 (101-149)||(56506580-56506628)
[»] chr7 (70 HSPs)
chr7 (104-401)||(20418891-20419187)
chr7 (101-398)||(22740156-22740452)
chr7 (101-398)||(37971960-37972256)
chr7 (101-401)||(18864157-18864455)
chr7 (104-386)||(42418797-42419079)
chr7 (101-233)||(10533034-10533166)
chr7 (101-233)||(37888833-37888965)
chr7 (101-233)||(37889181-37889313)
chr7 (101-233)||(37972318-37972450)
chr7 (104-233)||(18863970-18864099)
chr7 (101-233)||(17156967-17157099)
chr7 (101-233)||(20419246-20419378)
chr7 (101-230)||(3205018-3205147)
chr7 (101-230)||(9035217-9035347)
chr7 (293-390)||(13741760-13741857)
chr7 (101-233)||(13744155-13744286)
chr7 (101-233)||(29292922-29293054)
chr7 (101-233)||(38826835-38826967)
chr7 (101-233)||(9034867-9035000)
chr7 (101-233)||(48359320-48359450)
chr7 (101-233)||(3204669-3204799)
chr7 (101-233)||(13741557-13741688)
chr7 (101-233)||(29293268-29293400)
chr7 (101-233)||(42418591-42418723)
chr7 (104-233)||(22740514-22740641)
chr7 (101-229)||(36527724-36527852)
chr7 (105-221)||(48359592-48359707)
chr7 (104-226)||(36527387-36527508)
chr7 (101-178)||(44599489-44599566)
chr7 (101-178)||(44600112-44600189)
chr7 (101-161)||(16198971-16199031)
chr7 (293-401)||(22740339-22740446)
chr7 (1-40)||(5757423-5757462)
chr7 (295-398)||(13741760-13741863)
chr7 (101-179)||(46816287-46816365)
chr7 (101-178)||(13863313-13863390)
chr7 (101-178)||(13863934-13864010)
chr7 (101-153)||(3687658-3687710)
chr7 (101-153)||(9412327-9412379)
chr7 (1-40)||(30428909-30428948)
chr7 (1-40)||(46024063-46024102)
chr7 (355-401)||(9035059-9035105)
chr7 (293-399)||(37972145-37972250)
chr7 (242-398)||(18864115-18864270)
chr7 (355-400)||(37889076-37889121)
chr7 (1-34)||(46573490-46573523)
chr7 (1-38)||(48691030-48691067)
chr7 (101-153)||(13772903-13772955)
chr7 (293-401)||(20419071-20419178)
chr7 (242-278)||(38826781-38826817)
chr7 (1-40)||(15974926-15974965)
chr7 (1-40)||(28396758-28396797)
chr7 (1-40)||(33797967-33798006)
chr7 (1-40)||(48690931-48690970)
chr7 (7-37)||(27335625-27335655)
chr7 (356-398)||(36527577-36527619)
chr7 (101-178)||(8643743-8643820)
chr7 (293-330)||(9035068-9035105)
chr7 (3-40)||(12279781-12279818)
chr7 (101-154)||(18925062-18925115)
chr7 (293-330)||(37889076-37889113)
chr7 (242-278)||(3204815-3204851)
chr7 (242-278)||(9035161-9035197)
chr7 (102-153)||(18925324-18925373)
chr7 (101-153)||(23686421-23686472)
chr7 (242-278)||(36527531-36527567)
chr7 (293-329)||(36527583-36527619)
chr7 (242-278)||(42418740-42418776)
chr7 (1-37)||(44141241-44141277)
chr7 (242-278)||(48359466-48359502)
[»] chr1 (98 HSPs)
chr1 (101-389)||(6703460-6703746)
chr1 (101-398)||(28633720-28634016)
chr1 (104-398)||(46823846-46824138)
chr1 (101-398)||(48104872-48105170)
chr1 (101-401)||(27172302-27172595)
chr1 (102-399)||(13918621-13918920)
chr1 (101-401)||(26814876-26815173)
chr1 (101-398)||(21687220-21687520)
chr1 (101-278)||(32162920-32163097)
chr1 (101-233)||(4692355-4692487)
chr1 (101-278)||(26814694-26814870)
chr1 (104-233)||(48104681-48104810)
chr1 (104-233)||(50430003-50430132)
chr1 (101-233)||(9347126-9347258)
chr1 (101-233)||(20480168-20480299)
chr1 (101-233)||(21687025-21687157)
chr1 (101-233)||(46824200-46824332)
chr1 (101-233)||(49317752-49317883)
chr1 (101-398)||(20480373-20480665)
chr1 (163-401)||(44223746-44223983)
chr1 (101-230)||(9347476-9347604)
chr1 (104-233)||(28634079-28634208)
chr1 (104-233)||(42611536-42611665)
chr1 (101-233)||(999447-999578)
chr1 (101-233)||(6703816-6703948)
chr1 (101-233)||(50615543-50615674)
chr1 (101-233)||(50623371-50623502)
chr1 (101-398)||(27172116-27172416)
chr1 (104-230)||(42611188-42611314)
chr1 (103-233)||(50526394-50526524)
chr1 (101-230)||(13918446-13918575)
chr1 (101-233)||(49318088-49318219)
chr1 (101-233)||(20371040-20371169)
chr1 (101-233)||(20371274-20371406)
chr1 (101-233)||(50429656-50429787)
chr1 (105-233)||(50949487-50949615)
chr1 (101-230)||(44911025-44911154)
chr1 (104-230)||(999115-999239)
chr1 (104-401)||(44223866-44224169)
chr1 (101-233)||(47498301-47498431)
chr1 (101-233)||(49318367-49318496)
chr1 (106-233)||(32162734-32162855)
chr1 (104-233)||(44911359-44911488)
chr1 (101-233)||(4692022-4692152)
chr1 (101-213)||(19008692-19008804)
chr1 (101-217)||(39691938-39692054)
chr1 (101-178)||(49284409-49284486)
chr1 (104-177)||(50949164-50949237)
chr1 (1-40)||(18056820-18056859)
chr1 (1-38)||(179646-179683)
chr1 (296-401)||(46824025-46824129)
chr1 (101-150)||(50615240-50615289)
chr1 (101-150)||(50623068-50623117)
chr1 (101-153)||(8108995-8109047)
chr1 (1-37)||(23320075-23320111)
chr1 (293-401)||(28633902-28634010)
chr1 (1-37)||(37639381-37639417)
chr1 (101-153)||(47955306-47955358)
chr1 (293-401)||(48104878-48104986)
chr1 (101-178)||(6002237-6002314)
chr1 (296-401)||(6703641-6703746)
chr1 (356-401)||(9347369-9347414)
chr1 (101-150)||(19007735-19007783)
chr1 (293-330)||(32162867-32162904)
chr1 (1-37)||(8402301-8402337)
chr1 (293-401)||(21687226-21687333)
chr1 (1-37)||(35198171-35198207)
chr1 (101-153)||(48190771-48190823)
chr1 (242-278)||(50949289-50949325)
chr1 (1-40)||(16115887-16115926)
chr1 (104-155)||(22149699-22149750)
chr1 (1-36)||(22348079-22348114)
chr1 (102-153)||(47498497-47498547)
chr1 (355-398)||(50429897-50429940)
chr1 (198-233)||(50615294-50615329)
chr1 (198-233)||(50623122-50623157)
chr1 (355-398)||(50949336-50949379)
chr1 (103-153)||(17518604-17518653)
chr1 (1-35)||(30802437-30802471)
chr1 (104-153)||(1176839-1176888)
chr1 (11-40)||(11421631-11421660)
chr1 (11-40)||(34369697-34369726)
chr1 (356-401)||(42611380-42611425)
chr1 (293-330)||(50429897-50429934)
chr1 (293-330)||(50949342-50949379)
chr1 (242-278)||(999258-999294)
chr1 (242-278)||(999393-999429)
chr1 (242-278)||(4692168-4692204)
chr1 (242-278)||(9347275-9347311)
chr1 (293-329)||(9347369-9347405)
chr1 (101-153)||(13589661-13589712)
chr1 (242-278)||(21687174-21687210)
chr1 (101-153)||(39690794-39690846)
chr1 (101-153)||(48191357-48191409)
chr1 (242-278)||(50429950-50429986)
chr1 (242-278)||(50615491-50615527)
chr1 (242-278)||(50623319-50623355)
chr1 (242-278)||(50949435-50949471)
[»] chr8 (65 HSPs)
chr8 (101-398)||(37396906-37397199)
chr8 (104-398)||(33726861-33727156)
chr8 (104-401)||(15444401-15444698)
chr8 (101-398)||(6198658-6198953)
chr8 (101-392)||(41662521-41662819)
chr8 (101-362)||(17431287-17431545)
chr8 (104-399)||(25438893-25439176)
chr8 (101-401)||(16169174-16169471)
chr8 (104-398)||(34498125-34498416)
chr8 (101-233)||(24473690-24473822)
chr8 (101-233)||(37396708-37396840)
chr8 (101-233)||(6199018-6199150)
chr8 (101-233)||(16169529-16169661)
chr8 (101-355)||(20861436-20861692)
chr8 (101-233)||(9623502-9623634)
chr8 (101-233)||(34498477-34498609)
chr8 (101-230)||(24473343-24473472)
chr8 (103-233)||(15444213-15444343)
chr8 (293-401)||(9623692-9623800)
chr8 (101-207)||(2856526-2856632)
chr8 (103-161)||(25438794-25438852)
chr8 (101-178)||(13026635-13026712)
chr8 (170-233)||(33726734-33726797)
chr8 (101-178)||(9823338-9823415)
chr8 (101-178)||(13936723-13936799)
chr8 (101-178)||(39724025-39724102)
chr8 (1-40)||(4836691-4836730)
chr8 (1-40)||(4842136-4842175)
chr8 (1-40)||(8550540-8550579)
chr8 (1-40)||(32987435-32987474)
chr8 (101-155)||(12281124-12281178)
chr8 (104-178)||(13027258-13027332)
chr8 (293-401)||(33726867-33726975)
chr8 (349-401)||(37396965-37397017)
chr8 (101-153)||(41662405-41662457)
chr8 (1-40)||(7058150-7058189)
chr8 (1-40)||(15260841-15260880)
chr8 (1-40)||(39022011-39022050)
chr8 (103-153)||(765736-765786)
chr8 (103-217)||(15442765-15442879)
chr8 (101-178)||(9822748-9822825)
chr8 (101-178)||(13937366-13937443)
chr8 (101-178)||(22851390-22851467)
chr8 (101-153)||(3463947-3463999)
chr8 (293-389)||(6198852-6198947)
chr8 (1-37)||(7614107-7614143)
chr8 (101-153)||(15156187-15156239)
chr8 (1-37)||(15181830-15181866)
chr8 (242-278)||(16169477-16169513)
chr8 (101-153)||(37752084-37752136)
chr8 (1-40)||(1208745-1208784)
chr8 (355-398)||(24473584-24473627)
chr8 (103-150)||(33726696-33726743)
chr8 (363-401)||(34498303-34498341)
chr8 (101-155)||(43162234-43162287)
chr8 (101-178)||(3307338-3307415)
chr8 (293-330)||(24473584-24473621)
chr8 (101-153)||(15155883-15155935)
chr8 (293-401)||(15444410-15444518)
chr8 (101-153)||(16928942-16928994)
chr8 (101-153)||(16929244-16929296)
chr8 (242-278)||(34498425-34498461)
chr8 (101-153)||(37752418-37752470)
chr8 (114-178)||(39723415-39723479)
chr8 (101-153)||(43246178-43246230)
[»] chr6 (42 HSPs)
chr6 (101-401)||(22754657-22754954)
chr6 (101-401)||(22684114-22684411)
chr6 (104-398)||(33973867-33974158)
chr6 (104-398)||(32733560-32733855)
chr6 (101-361)||(10087646-10087912)
chr6 (101-385)||(13176826-13177109)
chr6 (101-233)||(33974221-33974353)
chr6 (101-233)||(7654470-7654602)
chr6 (102-233)||(22755012-22755142)
chr6 (104-233)||(32733918-32734047)
chr6 (101-233)||(29074294-29074425)
chr6 (101-233)||(29079058-29079189)
chr6 (101-233)||(29106867-29106998)
chr6 (101-233)||(2354409-2354540)
chr6 (101-233)||(2354733-2354864)
chr6 (123-233)||(13176641-13176751)
chr6 (101-178)||(33828990-33829067)
chr6 (101-178)||(33829613-33829690)
chr6 (1-40)||(24737681-24737720)
chr6 (1-40)||(35119271-35119310)
chr6 (1-37)||(18611228-18611264)
chr6 (1-40)||(29157262-29157301)
chr6 (1-40)||(33346361-33346400)
chr6 (123-161)||(403670-403708)
chr6 (101-153)||(3403717-3403769)
chr6 (101-153)||(3403991-3404043)
chr6 (242-278)||(13176767-13176803)
chr6 (294-397)||(22754842-22754944)
chr6 (294-336)||(22684124-22684166)
chr6 (104-153)||(3825530-3825578)
chr6 (242-275)||(29074245-29074278)
chr6 (242-275)||(29079009-29079042)
chr6 (242-275)||(29106818-29106851)
chr6 (1-34)||(34399683-34399716)
chr6 (242-278)||(7654418-7654454)
chr6 (101-153)||(10039676-10039727)
chr6 (349-401)||(10087671-10087723)
chr6 (101-153)||(13579653-13579704)
chr6 (101-153)||(18241854-18241906)
chr6 (242-278)||(22754960-22754996)
chr6 (101-153)||(33655117-33655168)
chr6 (242-278)||(33974168-33974204)
[»] chr2 (56 HSPs)
chr2 (108-398)||(6324924-6325213)
chr2 (101-401)||(8851338-8851636)
chr2 (102-398)||(16911023-16911321)
chr2 (101-392)||(7979769-7980056)
chr2 (101-398)||(17850978-17851264)
chr2 (101-401)||(7664248-7664545)
chr2 (104-233)||(26692742-26692871)
chr2 (101-278)||(7664551-7664727)
chr2 (104-230)||(8851151-8851277)
chr2 (103-233)||(6325269-6325399)
chr2 (101-230)||(16910827-16910956)
chr2 (104-233)||(26692399-26692528)
chr2 (101-233)||(17851325-17851456)
chr2 (104-233)||(19141771-19141898)
chr2 (104-232)||(5793450-5793578)
chr2 (101-233)||(7979567-7979697)
chr2 (101-230)||(41790837-41790966)
chr2 (101-206)||(37720204-37720307)
chr2 (104-233)||(41790494-41790622)
chr2 (101-224)||(5379890-5380013)
chr2 (101-217)||(5378661-5378777)
chr2 (104-233)||(18749729-18749856)
chr2 (102-233)||(18750062-18750178)
chr2 (103-205)||(19141446-19141547)
chr2 (101-178)||(2638820-2638897)
chr2 (101-178)||(2639459-2639536)
chr2 (101-178)||(26841587-26841664)
chr2 (101-178)||(38490818-38490894)
chr2 (1-40)||(18298101-18298140)
chr2 (1-40)||(20709810-20709849)
chr2 (1-39)||(14551309-14551347)
chr2 (101-178)||(26842215-26842292)
chr2 (349-401)||(17851160-17851212)
chr2 (102-178)||(18296077-18296153)
chr2 (101-153)||(20347466-20347518)
chr2 (101-153)||(30190923-30190975)
chr2 (1-40)||(25192928-25192967)
chr2 (104-178)||(7591204-7591278)
chr2 (355-401)||(26692636-26692682)
chr2 (1-34)||(4281778-4281811)
chr2 (242-398)||(8851296-8851451)
chr2 (1-37)||(4579808-4579844)
chr2 (101-153)||(6171458-6171510)
chr2 (242-278)||(6325217-6325253)
chr2 (101-153)||(11883623-11883675)
chr2 (101-153)||(11883928-11883980)
chr2 (101-153)||(18296695-18296747)
chr2 (242-278)||(18750010-18750046)
chr2 (101-153)||(24832331-24832383)
chr2 (293-336)||(16911029-16911072)
chr2 (242-278)||(17851274-17851310)
chr2 (242-278)||(19141583-19141619)
chr2 (101-153)||(20347163-20347215)
chr2 (1-37)||(25995326-25995362)
chr2 (242-278)||(26692690-26692726)
chr2 (101-153)||(29230282-29230334)
[»] scaffold0460 (4 HSPs)
scaffold0460 (101-397)||(525-816)
scaffold0460 (101-233)||(330-462)
scaffold0460 (293-389)||(530-625)
scaffold0460 (242-276)||(478-512)
[»] scaffold0041 (3 HSPs)
scaffold0041 (134-401)||(38284-38559)
scaffold0041 (101-233)||(38617-38749)
scaffold0041 (296-399)||(38444-38547)
[»] scaffold0176 (4 HSPs)
scaffold0176 (101-234)||(19621-19753)
scaffold0176 (293-398)||(19798-19902)
scaffold0176 (101-230)||(19969-20097)
scaffold0176 (296-392)||(19798-19893)
[»] scaffold0029 (5 HSPs)
scaffold0029 (101-230)||(9905-10035)
scaffold0029 (293-398)||(10100-10204)
scaffold0029 (171-230)||(10273-10332)
scaffold0029 (296-397)||(10109-10209)
scaffold0029 (101-153)||(10321-10371)
[»] scaffold0069 (3 HSPs)
scaffold0069 (101-233)||(50075-50204)
scaffold0069 (293-398)||(50265-50369)
scaffold0069 (101-233)||(50428-50560)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-40)||(7053-7092)
[»] scaffold0097 (1 HSPs)
scaffold0097 (1-40)||(13649-13688)
[»] scaffold0328 (2 HSPs)
scaffold0328 (101-178)||(6152-6229)
scaffold0328 (101-178)||(6772-6849)
[»] scaffold0544 (1 HSPs)
scaffold0544 (4-40)||(10668-10704)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-40)||(25222-25261)
[»] scaffold0802 (1 HSPs)
scaffold0802 (101-153)||(1422-1474)
[»] scaffold0319 (2 HSPs)
scaffold0319 (101-153)||(6394-6446)
scaffold0319 (101-153)||(6699-6750)
[»] scaffold0192 (1 HSPs)
scaffold0192 (101-153)||(25371-25423)
[»] scaffold0110 (1 HSPs)
scaffold0110 (101-153)||(45809-45860)
[»] scaffold0015 (1 HSPs)
scaffold0015 (101-153)||(17158-17209)
[»] scaffold0001 (2 HSPs)
scaffold0001 (101-153)||(438930-438982)
scaffold0001 (101-147)||(183670-183716)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-40)||(27643-27682)
[»] scaffold0035 (1 HSPs)
scaffold0035 (102-153)||(72967-73018)


Alignment Details
Target: chr5 (Bit Score: 157; Significance: 2e-83; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 101 - 401
Target Start/End: Complemental strand, 19515017 - 19514717
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| ||||||||  |||||| |||||| |||||| ||| |||    
T  19515017 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctatagttttcccccttt 19514918  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||| ||||||||||||||||||||       ||||||||||||| | ||||||||||||| |||||||              ||||||||    
T  19514917 ctgattttatggttcccatgacatttagtgctggtttttttatcaattaatgtgtgacacgtgtgtaatttcatttttaaaaaaataaaaaaatggtatt 19514818  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttat 400  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || |||||||    
T  19514817 tttcagattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctgtcaaaatctgaaaaatactatttttttat 19514718  T
Q  401 t 401  Q
    |    
T  19514717 t 19514717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 104 - 401
Target Start/End: Original strand, 21207229 - 21207525
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| ||||||  || ||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 21207328  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtattttt 303  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||              || ||||||||    
T  21207329 attttatggtccccatgacatttagtgctggtttttttatcaattaatgtgtgtcacgtgtgtaattccattttttaaaaaataaaaaaattgtattttt 21207428  T
Q  304 cagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||||||||||| ||  | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  21207429 cagattttgagagaa-agagcatgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccatttttttatt 21207525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 101 - 398
Target Start/End: Complemental strand, 43464245 - 43463952
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  43464245 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcccccttt 43464147  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||| | |||||||||||||||||||||              ||||||||    
T  43464146 ctgattttatggtccccatgacatttagtgctgg-ttttttatcaattaatgtgtgccacgtgtgtaattccatttttaaaaaaataaaaa-atggtatt 43464049  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  43464048 tttcagattttgagagaa-ggagcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttt 43463952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 101 - 401
Target Start/End: Original strand, 26570729 - 26571029
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||| ||||||||||| |||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| |||    
T  26570729 ggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttcccccttt 26570828  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccattttt-nnnnnnnnnnnnngatggtat 299  Q
    |||||||||||||||||||||||||||| |||||       ||||||||||||| | ||||| ||||||| |||||||               |||| ||    
T  26570829 ctgattttatggtccccatgacatttagcgctgg-ttttttatcaattaatgtgtgccacgtttgtaatttcatttttaaaaaaattaaaaaaatggcat 26570927  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttta 399  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||    
T  26570928 ttttcagattttgagagaaggaggcacatgatttttcagattttaagaagaaatatcacgtgcctcattctctcaaaatctgaaaaataccattttttta 26571027  T
Q  400 tt 401  Q
    ||    
T  26571028 tt 26571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 101 - 398
Target Start/End: Original strand, 22729008 - 22729300
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| ||||||||||  |||||||| ||||||||| |||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  22729008 ggcttaattgcacttttcccc-ctatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttg-cccctatagttttcccccttt 22729105  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||| |  ||||||||||||| ||||||              || |||||    
T  22729106 ctgattttatggtccccatgacatttagtgctgg--tttttatcaattaatgtgtgctacgtgtgtaattctatttttttaaaaataaaaaaatagtatt 22729203  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||||||||||| || || |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||| ||||||||||| |||||    
T  22729204 tttcagattttgagagaa-ggagcacgtgatttttcggattttaagaagaaatatcacatgcctccttctctcaaaatctgaaaaataccattttttt 22729300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 101 - 378
Target Start/End: Complemental strand, 37780796 - 37780524
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||| ||| |||||||||||||||| |||||| || ||| ||| |||    
T  37780796 ggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttg-cccctatag-tttcccccttt 37780699  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||| | |||||||||||||||||||||              || |||||    
T  37780698 ctgattttatggtccccatgacatttagtgctg--atttttatcaattaatgtgtgccacgtgtgtaattccatttttaaaaaaataaaaaaatagtatt 37780601  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaat 378  Q
    ||||||||||||| | || || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37780600 tttcagattttgaaagaa-ggagcacgtgatttttcagattttaagaagaaatatcacgtgtcttcttctctcaaaat 37780524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 101 - 398
Target Start/End: Original strand, 25940521 - 25940824
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| ||||  || |||||||||| ||||||||| ||||||||||  |||||| |||||||||||||||| |||||| ||||||  || |||    
T  25940521 ggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcacccttt 25940620  T
Q  201 ctgattttatggtccccatg----acatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatgg 296  Q
    ||||||||||||||||||||    ||||||||| ||||       ||||||||||||  | |||||||||| ||||| ||||              ||||    
T  25940621 ctgattttatggtccccatgcatgacatttagtactggtttttttatcaattaatgtatgccacgtgtgtacttccagtttttaaaaaataaaaa-atgg 25940719  T
Q  297 tatttttcagattttgagataagggggcacgtgatttt---tcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatg 393  Q
    ||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  25940720 tatttttcagattttgagagaagggggcacgtgattttttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctaaaaaataccatt 25940819  T
Q  394 ttttt 398  Q
    |||||    
T  25940820 ttttt 25940824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 101 - 398
Target Start/End: Complemental strand, 37610671 - 37610386
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||| ||||| |||| ||||||||||| |||||||| |||||||||||||| ||| |||||||||||||||| |||||| || ||| ||| |||    
T  37610671 ggcttaattgtactttccccc-ctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgccccctatag-tttcccccttt 37610574  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    |||||||||||||||||||||||||||||| |||       ||||||||||||| | ||||||||||||||||||| |              || |||||    
T  37610573 ctgattttatggtccccatgacatttagtgttgg--tttttatcaattaatgtgtgccacgtgtgtaattccatttctaaaaaaa-------atagtatt 37610483  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||||||||| | || || ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||    
T  37610482 tttcagattttgaaagaa-ggagcacgtgatttttaagattttaagaagaaatatcacgtgcctccttctctcaaaatcagaaaaataccattttttt 37610386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 104 - 379
Target Start/End: Original strand, 30401885 - 30402161
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||| ||||| |||||||||| |||||| |  ||||||| ||| ||    
T  30401885 ttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccctata-attttcccctttatg 30401983  T
Q  204 attttatggtccccatgacatttagtgctgg---nnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtat 299  Q
    |||||||||||||||||| |||||||| |||          ||||||||||||| |||||||||||||||||| |||||              |||||||    
T  30401984 attttatggtccccatgatatttagtgttggttttttttttatcaattaatgtgtgtcacgtgtgtaattccatttttttaaaaataaaaaaaatggtat 30402083  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatc 379  Q
    |||| ||||||||||  |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  30402084 tttttagattttgag--aagggggcacgtgatttttcagattttaagaaaaaatatcacgtgcctccttctctcaaaatc 30402161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 101 - 399
Target Start/End: Complemental strand, 26571218 - 26570914
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| | | |||    
T  26571218 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctccttt 26571119  T
Q  201 ctgattttatggtccccatgacatttagtgctg------gnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngat 294  Q
    |||||||||||||||||||||||||||||||||              ||||||||||||| |||||||||||||||||||||||              ||    
T  26571118 ctgattttatggtccccatgacatttagtgctgatatgtctgtttttatcaattaatgtgtgtcacgtgtgtaattccattttttaaaaaataaaaaaat 26571019  T
Q  295 ggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgt 394  Q
    ||||||||||||||||||||| || | |||||||||| ||||   ||  ||   |||| |||| ||| |||||||||||||||||| |||||| |||| |    
T  26571018 ggtatttttcagattttgagagaatgaggcacgtgatatttcttcttaaaatctgaaaaatcatgtgcctccttctctcaaaatctgaaaaatgccattt 26570919  T
Q  395 tttta 399  Q
    |||||    
T  26570918 tttta 26570914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 12498982 - 12498850
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||| |||||||||| |||||| |||||| ||| |||    
T  12498982 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcccccttt 12498883  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  12498882 ctgattttatggtccccatgacatttagtgctg 12498850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 101 - 401
Target Start/End: Original strand, 10098519 - 10098813
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||  |||||||||| ||||||||| |||||||| |  |||||| |||||||||||||||| |||||              ||    
T  10098519 ggcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccct--------------tt 10098604  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnn-------atcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnnga 293  Q
    |||||||||||||||||||||||||||||| ||               ||||||||||||| |||||||||||||||||||||||              |    
T  10098605 ctgattttatggtccccatgacatttagtgatgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaattccattttttaaaaaataaaaaaa 10098704  T
Q  294 -tggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
     |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  10098705 atggtatttttcagattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctcattctctcaaaatctgaaaaataccat 10098804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 104 - 398
Target Start/End: Complemental strand, 10098991 - 10098699
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||| | |||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||| ||||||| |||||| ||  ||||||    
T  10098991 ttaattgcacttttcctc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctg 10098893  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtattttt 303  Q
    |||||||||||||||||||||||||| || |       ||||||||||||| ||||||||| |||||||||||||              |||||||||||    
T  10098892 attttatggtccccatgacatttagtact-gattttttatcaattaatgtgtgtcacgtgtataattccattttttaaaaaataaaaaaatggtattttt 10098794  T
Q  304 cagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    |||||||||||| || | | |||||||| ||||   ||  ||   |||| |||||||| | |||||||||||||||| ||||||||||| |||||    
T  10098793 cagattttgagagaatgagacacgtgatatttcttcttaaaatctgaaaaatcacgtgcccccttctctcaaaatctgaaaaataccattttttt 10098699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 19514525 - 19514658
Alignment:
Q  101 ggcttaattgcacttttcccctc-tatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatt 199  Q
    |||||||||||||||| |||| | ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| ||    
T  19514525 ggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 19514624  T
Q  200 tctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||||||||||||||||||||    
T  19514625 tctgattttatggtccccatgacatttagtgctg 19514658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 12498567 - 12498698
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  12498567 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 12498666  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||  ||||||||||||||||||    
T  12498667 ctgattttatggt-tccatgacatttagtgctg 12498698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 34147564 - 34147435
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||| ||||| |||||||||||||||| |||||| |||||| ||| |||    
T  34147564 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctatagttttcccccttt 34147465  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||||||| ||||||||||||    
T  34147464 ctgattttatggtccccgtgacatttagtg 34147435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 102 - 230
Target Start/End: Complemental strand, 22729492 - 22729365
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttc 201  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| ||||    
T  22729492 gcttaattgcacttttcccc-ctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 22729394  T
Q  202 tgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||||| |||||||||||||    
T  22729393 tgattttatggtccctatgacatttagtg 22729365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 3888239 - 3888367
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||| ||||||| |||||||||||||||||| | |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  3888239 ggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 3888338  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||| ||||||||||||||||    
T  3888339 ctgattttatggt-cccatgacatttagtg 3888367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 2817152 - 2817277
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||| | |||| || |||||||||||||||| |||||| | |||||||| ||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctata-tttttcccctttctg 2817250  T
Q  204 attttatggtccccatgacatttagtg 230  Q
    |||||||||||||||||||||||||||    
T  2817251 attttatggtccccatgacatttagtg 2817277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 3888713 - 3888584
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||||   |||| |||||||||||| | |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| ||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 3888614  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||| |||||    
T  3888613 attttatggtccccatgacatttaatgctg 3888584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 278
Target Start/End: Complemental strand, 11317025 - 11316852
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||||||||||  ||||| || |||||||||||||| |||||||||| ||| ||| |||| ||||||||||| |||||| |||||| ||  ||||||    
T  11317025 ttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctatagttttccctctttctg 11316926  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    |||||||||||||||||||||||||||||||       ||||||||||||  | ||||||||||||| |||||||    
T  11316925 attttatggtccccatgacatttagtgctgg-ttttttatcaattaatgtctgccacgtgtgtaatttcattttt 11316852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 104 - 276
Target Start/End: Original strand, 43463759 - 43463938
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| ||||||  || ||||||    
T  43463759 ttaattgcacttttcccct-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctg 43463857  T
Q  204 ---------attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccattt 276  Q
             |||||||||||||||||||||||||||||||       ||||||||||||| | |||||||||||||||||||    
T  43463858 attttaattattttatggtccccatgacatttagtgctgg-ttttttatcaattaatgtgtgccacgtgtgtaattccattt 43463938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 34147141 - 34147271
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||||| |  |||||||  ||||||||| |||||||||| | ||||| |||||||||||||||| |||||| |||||| ||| |||    
T  34147141 ggcttaattgcacttttccctt--atagtttatcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttcccccttt 34147238  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||| |||||||||||||||    
T  34147239 ctgattttatggtccccgtgacatttagtgctg 34147271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 41072264 - 41072136
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||| ||||||||| | |||||||||| ||||||| | ||||||||||  |||||| |||||||||||||||| |||||| |||||| ||| |||||     
T  41072264 ttaattacacttttcctc-ctatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttcta 41072166  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||||||||||||||||    
T  41072165 attttatggtccccatgacatttagtgctg 41072136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 37780320 - 37780410
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttt 192  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||||| |||||||||||||||| |||||| ||||||    
T  37780320 ggcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccctatagtttt 37780410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 37610202 - 37610292
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttt 192  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||||| |||||||||||||||| ||| || ||||||    
T  37610202 ggcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccttatagtttt 37610292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 25941067 - 25940956
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttt-tcccattt 200  Q
    |||||||||||||||||||  ||||||||||  |||| ||| |||||||| | ||||||| |||||||||||||||| |||||| ||||||  ||| |||    
T  25941067 gcttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccccttt 25940968  T
Q  201 ctgattttatgg 212  Q
    ||||||||||||    
T  25940967 ctgattttatgg 25940956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 2817626 - 2817502
Alignment:
Q  103 cttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttct 202  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||| || |  |||||| ||||||||||||||||  ||||| |  ||| ||   ||||    
T  2817626 cttaattgcacttttcccc-ctatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgctccctata-atttccctccttct 2817529  T
Q  203 gattttatggtccccatgacatttagt 229  Q
     ||||||||||||||||||||||||||    
T  2817528 aattttatggtccccatgacatttagt 2817502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 11316717 - 11316805
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttt 192  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||| |  ||| || ||||||||| |||||| |||||| ||||||    
T  11316717 ttaattgcacttttccctcctatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccctatagtttt 11316805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 25940955 - 25940887
Alignment:
Q  165 aacgagcgattttgtcccctaaagtttttcccatttctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||| || ||||||||    
T  25940955 aacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgatatatagtgctg 25940887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 18817665 - 18817588
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  18817665 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 18817588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 42919305 - 42919416
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||| ||||| ||| ||||| ||| |||||||||| ||||| |||| |||  || ||||||||||||||||  |||||   |||||||| |||    
T  42919305 ggcttaattgctctttttccc-ctatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctatcatttttccccttt 42919403  T
Q  201 ctgattttatggt 213  Q
    |||||||||||||    
T  42919404 ctgattttatggt 42919416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 43463958 - 43464061
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| |||||||| |||||||||||||||||| |||||||||||    
T  43463958 atggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcacgtg-ctccttctctcaaaatctgaaaaataccat 43464056  T
Q  393 gtttt 397  Q
     ||||    
T  43464057 ttttt 43464061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 25017207 - 25017246
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25017207 tgtacactagatctgatggttgtgaagtgtttatgcacgg 25017246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 34329202 - 34329163
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34329202 tgtacactagatctgatggttgtgaagtgtttatgcacgg 34329163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 11350808 - 11350884
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||| ||||| || ||||  |||||||||||||| |||||||||| |||| || ||||||||||||||||    
T  11350808 ggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcaccccatatttttaaacgagcgattttg 11350884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 11351478 - 11351405
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgatttt 177  Q
    ||||||||||||||| |  ||||  |||||||||||||| |||||||||| |||| || |||||||||||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgatttt 11351405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 13362843 - 13362806
Alignment:
Q  3 tacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13362843 tacactagatctgatggttgtgaagtgtttatgcacgg 13362806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 18816952 - 18817029
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||| ||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  18816952 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 18817029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 16668784 - 16668820
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  16668784 tgtacactagatctgatggttgtgaagtgtttatgca 16668820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18465546 - 18465582
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  18465546 tgtacactagatctgatggttgtgaagtgtttatgca 18465582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 401
Target Start/End: Complemental strand, 22729294 - 22729187
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| |||| ||||| ||||   ||  ||   |||| |||||||| |||||||||||||||||| |||||||| ||    
T  22729294 atggtatttttcagattttgagagaaggaggcatgtgatatttcttcttaaaatccgaaaaatcacgtg-ctccttctctcaaaatctgaaaaatactat 22729196  T
Q  393 gtttttatt 401  Q
     ||||||||    
T  22729195 ttttttatt 22729187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 42512271 - 42512235
Alignment:
Q  4 acactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||||||||||||||||||||||||||    
T  42512271 acactagatctgatggttgtgaagtgtttatgcacgg 42512235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2827057 - 2827096
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  2827057 tgtacactagatctgatggttgtaaagtgtttatgcacgg 2827096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 23335697 - 23335736
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  23335697 tgtacactagatctgatggttgtgaaatgtttatgcacgg 23335736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 28070143 - 28070182
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  28070143 tgtacactagatctgatagttgtgaagtgtttatgcacgg 28070182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 16466796 - 16466746
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgca 151  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| ||||||||    
T  16466796 ggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 31569910 - 31569983
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| ||||  |||| ||||||||| ||||||||||||||  || |||||||| |||||||    
T  31569910 ttaattgcacttttcccc-ctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 31569983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 401
Target Start/End: Original strand, 19514729 - 19514834
Alignment:
Q  296 gtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtt 395  Q
    |||||||||||||||||| | |||| | |||||||| ||||   ||  ||   |||| |||||||| | |||||||||||||||| ||||||||||| ||    
T  19514729 gtatttttcagattttgacagaaggagacacgtgatatttcttcttaaaatctgaaaaatcacgtgcccccttctctcaaaatctgaaaaataccatttt 19514828  T
Q  396 tttatt 401  Q
    ||||||    
T  19514829 tttatt 19514834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 18433015 - 18433067
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  18433015 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 18433067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 401
Target Start/End: Complemental strand, 21207516 - 21207409
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| ||||| || ||| |||||||||||||| |||||||| ||    
T  21207516 atggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcacatg-ctctttctctcaaaatctgaaaaatacaat 21207418  T
Q  393 gtttttatt 401  Q
     ||||||||    
T  21207417 ttttttatt 21207409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 25115757 - 25115809
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||||||||||||  ||||||||||    
T  25115757 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcacc 25115809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 25174849 - 25174901
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||||||||||||  ||||||||||    
T  25174849 ggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcacc 25174901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 25940870 - 25940834
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  25940870 atcaattaatgtgtgtcacgtgtgtaattccattttt 25940834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 34147288 - 34147324
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34147288 atcaattaatgtgtgtcacgtgtgtaattccattttt 34147324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 37610339 - 37610375
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37610339 atcaattaatgtgtgtcacgtgtgtaattccattttt 37610375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 37780458 - 37780494
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37780458 atcaattaatgtgtgtcacgtgtgtaattccattttt 37780494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 401
Target Start/End: Original strand, 3888479 - 3888525
Alignment:
Q  355 tcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    ||||||| |||||||||||||||||| |||||||| || ||||||||    
T  3888479 tcacgtgcctccttctctcaaaatctgaaaaatacaatttttttatt 3888525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 41072026 - 41071984
Alignment:
Q  356 cacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    |||||| |||||||||||||||||| ||||||||||| |||||    
T  41072026 cacgtgcctccttctctcaaaatctgaaaaataccattttttt 41071984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 3888387 - 3888423
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  3888387 atcaattaatgtgtgccacgtgtgtaattccattttt 3888423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 401
Target Start/End: Original strand, 11316809 - 11316845
Alignment:
Q  365 ccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  11316809 ccttctctcaaaatctgaaaaataccatttttttatt 11316845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 16726084 - 16726132
Alignment:
Q  107 attgcacttttcccctctatagtttgccaattgtgcaattttgcacctc 155  Q
    ||||||||||| ||| ||||  |||||||||||||| ||||||||||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacctc 16726132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 18433370 - 18433318
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||  |||||||| ||||||||||    
T  18433370 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 18433318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 25116115 - 25116063
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||  |||||||| ||||||||||    
T  25116115 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 25116063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 25175205 - 25175153
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||  |||||||| ||||||||||    
T  25175205 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 25175153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 26020450 - 26020502
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||| | ||||  ||||| |||||||| ||||||||||    
T  26020450 ggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcacc 26020502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 41071990 - 41072026
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtg 329  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  41071990 atggtatttttcagattttgagagaaggaggcacgtg 41072026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 41072116 - 41072084
Alignment:
Q  246 attaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||| |||||||||||||||||||||||    
T  41072116 attaatgtgtgtcacgtgtgtaattccattttt 41072084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 2e-83; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 104 - 401
Target Start/End: Complemental strand, 27238951 - 27238655
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||  ||||| |||||| ||| ||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttccccctttctg 27238852  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtattttt 303  Q
    |||||||||| ||||||||||||||||||||       ||||||||||||| | |||||||||||||||||||||              || ||||||||    
T  27238851 attttatggttcccatgacatttagtgctgg-ttttttatcaattaatgtgtgccacgtgtgtaattccatttttttttaaaataaaaaattgtattttt 27238753  T
Q  304 cagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||  || ||||||||    
T  27238752 cagattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatattatttttttatt 27238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 101 - 401
Target Start/End: Original strand, 40848521 - 40848825
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  40848521 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 40848619  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnn---atcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnnga--tg 295  Q
    |||||||||||||||||||||||||||| |||||          ||||||||||||| | |||||||||||||||||||||              |  ||    
T  40848620 ctgattttatggtccccatgacatttagcgctggttttttttttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaaaaattg 40848719  T
Q  296 gtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtt 395  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  40848720 gtatttttcagattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctgaaaaataccatttt 40848819  T
Q  396 tttatt 401  Q
    ||||||    
T  40848820 tttatt 40848825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 104 - 401
Target Start/End: Complemental strand, 26007670 - 26007371
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||| ||| |||||||||||||||||| | ||||||||| ||||| || |||||||||||||||| |||||| |||||| ||| ||||||    
T  26007670 ttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctatagttttccccctttctg 26007571  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnnga---tggtatt 300  Q
    |||||||||||||||| ||||||||||||||       ||||||||||||| | |||||||||||||||||||||              |   |||||||    
T  26007570 attttatggtccccataacatttagtgctggtttttt-atcaattaatgtgtgccacgtgtgtaattccattttttaaaaataaaaaaaaaaatggtatt 26007472  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttat 400  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  26007471 tttcagattttgagataagggggcacgcgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccatttttttat 26007372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 123 - 401
Target Start/End: Original strand, 24485043 - 24485320
Alignment:
Q  123 ctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctgattttatggtccccatgac 222  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||||||||| | |||||| |||||||||| |||||||||||||||||||||||||    
T  24485043 ctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctatagtttttcccctttctgattttatggtccccatgac 24485142  T
Q  223 atttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatttttcagattttgagataagggg 322  Q
    |||||||||| |       ||||||||||||| | |||||||||||||||||||||              || |||||| ||||||||||||| |||||     
T  24485143 atttagtgct-gattttttatcaattaatgtgtgccacgtgtgtaattccattttttttaaaataaaaaaattgtatttgtcagattttgagagaagggt 24485241  T
Q  323 gcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  24485242 gcacgtgatttttcacattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccatttttttatt 24485320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 101 - 398
Target Start/End: Original strand, 48159897 - 48160193
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  48159897 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 48159996  T
Q  201 ctgattttatggtccccatgacatttagtgct-ggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtat 299  Q
    ||||||||||| ||||| |||||||||||| | |        ||||||||||||| | |||||||||||||||||||||              || ||||    
T  48159997 ctgattttatgatccccgtgacatttagtgttagttttttttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaa-atagtat 48160095  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    |||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||| ||| |||||    
T  48160096 ttttcagattttgagagaa-ggggcacgtgatttttcagatttttagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataacattttttt 48160193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 101 - 398
Target Start/End: Complemental strand, 36181044 - 36180748
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||| | ||||||||||  |||||||| |||||| ||| ||||||| ||||||||||||||| ||||||| |||||||||| |||    
T  36181044 ggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgattttttcccctatagtttttccctttt 36180945  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggta-t 299  Q
    ||||||||||| ||||||||||||||||||||||       |||||||||||||   |||||||||||||||||||||              || ||| |    
T  36180944 ctgattttatgatccccatgacatttagtgctggtttttttatcaattaatgtgtaccacgtgtgtaattccatttttaaaaaaataaaaa-atagtatt 36180846  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    |||||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  36180845 ttttcagattttgagagaa-tgagcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttt 36180748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 102 - 398
Target Start/End: Original strand, 22429159 - 22429455
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttc 201  Q
    ||||||||||||||||| || ||||| |||||||||||||| | ||||||||  |||||| ||||||||||||||||||||||| |||||| ||| ||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctatagttttccccctttc 22429258  T
Q  202 tgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||| | ||| |||||||||||| |||||              || |||||    
T  22429259 tgattttatggtccccatgacatttagtgctgatttttttatcaattaatgtgtgccacatgtgtaattccattttttaaaaaataaaaaaaatcgtatt 22429358  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| || |||||    
T  22429359 tttcagattttgagagaa-ggagcacgtgatttttcagattttaagaagaaatatcacgtgcctcattctctcaaaatctgaaaaatactattttttt 22429455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 101 - 401
Target Start/End: Complemental strand, 44008454 - 44008157
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||  |||||| ||||||  || |||    
T  44008454 ggcttaattgcacttttcatc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctcccttt 44008356  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||| | ||||||||| ||||||       ||||||||||||| | ||| |||||||||||||||||              ||| ||||    
T  44008355 ctgattttatggtcctcgtgacatttaatgctggtttttttatcaattaatgtgtgccacatgtgtaattccatttttaaaaaaataaaaa-atgatatt 44008257  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttat 400  Q
    ||||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||  || |||||||    
T  44008256 tttcagattttgagagaa-tgagcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatccgaaaaatataatttttttat 44008158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 278
Target Start/End: Complemental strand, 42673349 - 42673173
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  42673349 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 42673251  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||||||||| | |||||||| |||       ||||||||||||| | |||||||||||||||||||||    
T  42673250 ctgattttatggtccccatcagatttagtgttggtttttttatcaattaatgtgtgccacgtgtgtaattccattttt 42673173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 40849015 - 40848886
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||||| |||||| ||||||  || |||    
T  40849015 ggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcacccttt 40848916  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||||||||||||||||||||    
T  40848915 ctgattttatggtccccatgacatttagtg 40848886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 48160387 - 48160258
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||||||| |||    
T  48160387 ggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttccccttt 48160288  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||| ||||||||||||||||||    
T  48160287 ctgattttatgatccccatgacatttagtg 48160258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 278
Target Start/End: Complemental strand, 10348853 - 10348676
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||   ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  10348853 ggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10348754  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    || |||||||||||||| ||||||||||||||||       ||||||| ||||| | |||||||||||||||||||||    
T  10348753 ctaattttatggtccccgtgacatttagtgctggtttttttatcaattcatgtgtgccacgtgtgtaattccattttt 10348676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 47666389 - 47666257
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||| |||||| |||||| ||| |||    
T  47666389 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 47666290  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| |||||||||||||||||||    
T  47666289 ctgattttatggttcccatgacatttagtgctg 47666257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 104 - 398
Target Start/End: Original strand, 53766166 - 53766454
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||| ||  |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| || ||| ||||||| ||    
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatag-tttccccatttttg 53766264  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccattttt--nnnnnnnnnnnnngatggtattt 301  Q
    ||||||||||| ||||||||||||||||||        || |||||||||| | |||||||||||||||||||||                |||||||||    
T  53766265 attttatggtctccatgacatttagtgctg--atttttat-aattaatgtgtgccacgtgtgtaattccattttttaaaaaaataaaaaaaatggtattt 53766361  T
Q  302 ttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    || ||||||||||| || || ||||||| |||||   ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  53766362 tttagattttgagagaa-ggagcacgtggttttt---attttaagaagaaatatcacgtgtctcgttctctcaaaatctgaaaaataccattttttt 53766454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 53687888 - 53688015
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||  |||||| |||||| ||| |||    
T  53687888 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatagttttcccccttt 53687987  T
Q  201 ctgattttatggtccccatgacatttag 228  Q
    ||||||||||||||||||||||||||||    
T  53687988 ctgattttatggtccccatgacatttag 53688015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 103 - 233
Target Start/End: Complemental strand, 22429647 - 22429518
Alignment:
Q  103 cttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttct 202  Q
    |||||||||||||| || | |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||||||| |||||    
T  22429647 cttaattgcactttccctc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttct 22429549  T
Q  203 gattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||    
T  22429548 gattttatggtccccatgacatttagtgctg 22429518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 101 - 389
Target Start/End: Complemental strand, 42456247 - 42455965
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||| |||||  | ||||  |||||||||| |||||||||| ||||||| |||||||||||||||| |||||| || ||| ||| |||    
T  42456247 ggcttaattgcactttccccct--aaagttccccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatag-tttcccccttt 42456151  T
Q  201 ctgattttatggtccccatgacatttagtgctgg--nnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggta 298  Q
    |||||||||||||||||||||||||||||| |||         || |||||||||| | |||||||||||||||||||||              ||||||    
T  42456150 ctgattttatggtccccatgacatttagtgatggtttttttttataaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaa-atggta 42456052  T
Q  299 tttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaatac 389  Q
    ||||||||||||||||| || |||| | |||||||||||||||||   ||||||||||||||| ||||||||||| |||||| ||||||||    
T  42456051 tttttcagattttgagagaaaggggtaggtgatttttcagatttt---aagaaatatcacgtgcctccttctctc-aaatctgaaaaatac 42455965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 3353597 - 3353474
Alignment:
Q  108 ttgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctgattt 207  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| || ||| ||| ||||||||||    
T  3353597 ttgcacttttcccc-ctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatag-tttccccctttctgattt 3353500  T
Q  208 tatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||||||||||||    
T  3353499 tatggtccccatgacatttagtgctg 3353474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 27238465 - 27238597
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||| |||||||||  |||||||||||||||||||| ||||||||||  |||||| |||||||||||||||| |||||| |||||| ||| |||    
T  27238465 ggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcccccttt 27238564  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||| ||||||||||    
T  27238565 ctgattttatggtccccatgacttttagtgctg 27238597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 42672978 - 42673109
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||| |||||||| |||||| |||||| ||| |||    
T  42672978 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttcccccttt 42673076  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
     ||||||||||| ||||||||||||||||||||    
T  42673077 atgattttatggcccccatgacatttagtgctg 42673109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 44007967 - 44008099
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||| | |||||||||  ||||||||||| |||||| || |||||| |||||||||||||||| |||||| |||||||||| |||    
T  44007967 ggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttccccttt 44008066  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| |||||||||||||||||||    
T  44008067 ctgattttatggttcccatgacatttagtgctg 44008099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 10348480 - 10348611
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttc 201  Q
    ||||||||||||||||| ||  ||||||||| ||||||| |||||||||| | |||| || ||||||||||||||||||||||| |||||||||| ||||    
T  10348480 gcttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctatagtttttcccctttc 10348579  T
Q  202 tgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||| ||||||||||||||||||||||    
T  10348580 tgattttatagtccccatgacatttagtgctg 10348611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 36180556 - 36180683
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||| ||||||||  |||||||| ||||||||| |||||||| | ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  36180556 ggcttaattgcacatttcccct--atagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctatagttttcccccttt 36180653  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||||||||||||||||||||    
T  36180654 ctgattttatggtccccatgacatttagtg 36180683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 101 - 229
Target Start/End: Original strand, 3353128 - 3353253
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||   |||||| |||||| ||| |||    
T  3353128 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt--ccccctatagttttcccccttt 3353224  T
Q  201 ctgattttatggtccccatgacatttagt 229  Q
    |||||||||||||||||||||||||||||    
T  3353225 ctgattttatggtccccatgacatttagt 3353253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 26007182 - 26007313
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| || ||| |||||| |   |||    
T  26007182 ggcttaattgca-ttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttccatcttt 26007280  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  26007281 ctgattttatggtccccatgacatttagtgctg 26007313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 24485513 - 24485390
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||||| ||||||| |||| ||||||||||| |||||| ||| || ||| |||    
T  24485513 ggcttaattgcacttttctcc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagtattcccccttt 24485415  T
Q  201 ctgattttatggtccccatgacatt 225  Q
    || ||||||||||||||||||||||    
T  24485414 ctaattttatggtccccatgacatt 24485390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 53688356 - 53688228
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||  ||| |||||||||||||||||||| |||||||||  |||||||  ||||||||||||||| |||||| |||||| ||| |||    
T  53688356 ggcttaattgcactttctccc-ctatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctatagttttcccccttt 53688258  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||| | | ||||||||||||||    
T  53688257 ctgattttatgattctcatgacatttagtg 53688228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 47665911 - 47666040
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| |||  ||||||||| ||||||||| |||||||||||||| |||  ||||||| ||||||  | |||| |||||| ||| |||    
T  47665911 ggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgattttaccacctatagttttcccccttt 47666010  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
     |||||||||||| | ||||||||||||||    
T  47666011 ttgattttatggttctcatgacatttagtg 47666040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17627221 - 17627282
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacggatccttatgcaccataattttt 62  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  17627221 tgtacactagatctgatggttgtgaagtgtttatgcacaaatccttatgcaccataactttt 17627282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 53766633 - 53766513
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||||| |||             |||||  |  |||||||| |||    
T  53766633 ggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttttaa------------ctccccctatatttttccccttt 53766546  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  53766545 ctgattttatggtccccatgacatttagtgctg 53766513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 101 - 216
Target Start/End: Complemental strand, 21896564 - 21896450
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||| ||| ||||| |||| ||||||||| |||||||||| ||| ||| || |||||||||||||  ||| |   ||||||||||||    
T  21896564 ggcttaattgcattttttccc-ctatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgcaccccatcatttttcccattt 21896466  T
Q  201 ctgattttatggtccc 216  Q
     |||||||||||||||    
T  21896465 ttgattttatggtccc 21896450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 8314013 - 8314129
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||| || ||||| |||| ||||||||| ||||||||||  ||  || |||||| |||||||||  |||||   |||| ||| |||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctatcattttcccccttt 8314112  T
Q  201 ctgattttatggtcccc 217  Q
    |||||||||||| ||||    
T  8314113 ctgattttatggccccc 8314129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 50754081 - 50754042
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50754081 tgtacactagatctgatggttgtgaagtgtttatgcacgg 50754042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 52987640 - 52987679
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  52987640 tgtacactagatctgatggttgtgaagtgtttatgcacgg 52987679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 42455790 - 42455839
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgc 150  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  42455790 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 42455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 20969073 - 20969021
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 20969021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7045290 - 7045329
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  7045290 tgtacactagatctgatggttgtgaagtgtttatacacgg 7045329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16277404 - 16277443
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  16277404 tgtacactagatatgatggttgtgaagtgtttatgcacgg 16277443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19385305 - 19385344
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  19385305 tgtacactaaatctgatggttgtgaagtgtttatgcacgg 19385344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 51362428 - 51362467
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  51362428 tgtacactaaatctgatggttgtgaagtgtttatgcacgg 51362467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 53766448 - 53766347
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| || | | |||||||| ||||   || | | || ||| | |||||| ||||||||||||||||||||||||||||||    
T  53766448 atggtatttttcagattttgagagaacgagacacgtgatatttc---ttcttaaaataaaaaccacgtg-ctccttctctcaaaatctaaaaaataccat 53766353  T
Q  393 gttttt 398  Q
     |||||    
T  53766352 tttttt 53766347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 391
Target Start/End: Complemental strand, 40848816 - 40848718
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaatacca 391  Q
    ||||||||||||||||||||||| |||| | |||||||| ||||   ||  ||   |||| |||||||| | |||||||||||||||| ||||||||||    
T  40848816 atggtatttttcagattttgagagaaggagacacgtgatatttcttcttaaaatctgaaaaatcacgtgcccccttctctcaaaatctgaaaaatacca 40848718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 26007380 - 26007485
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| ||| |||| | |||| ||||||||||| |||||||||||    
T  26007380 atggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcgcgtgcccccttatctcaaaatctgaaaaataccat 26007479  T
Q  393 gttttt 398  Q
     |||||    
T  26007480 tttttt 26007485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 22429502 - 22429466
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22429502 atcaattaatgtgtgtcacgtgtgtaattccattttt 22429466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 401
Target Start/End: Complemental strand, 24485311 - 24485203
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| ||||||||   |||||||||||||||| | |||||| ||    
T  24485311 atggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatgtgaaaaatcacgtgcacccttctctcaaaatctgacaaatacaat 24485212  T
Q  393 gtttttatt 401  Q
     ||||||||    
T  24485211 ttttttatt 24485203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 44008115 - 44008151
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  44008115 atcaattaatgtgtgtcacgtgtgtaattccattttt 44008151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8718176 - 8718137
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  8718176 tgtacactagatctgatggttgtgaagtatttatgtacgg 8718137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9070063 - 9070024
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  9070063 tgtacactagatctgatggttgtgaagtatttatgtacgg 9070024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 336
Target Start/End: Original strand, 36180754 - 36180797
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttc 336  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||    
T  36180754 atggtatttttcagattttgagagaaggaggcacgtgatatttc 36180797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39099272 - 39099233
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  39099272 tgtacactagatctgatggttgtgaaatatttatgcacgg 39099233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 42455855 - 42455898
Alignment:
Q  187 agtttttcccatttctgattttatggtccccatgacatttagtg 230  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||    
T  42455855 agttttccccctttctgattttatggtccccatgacgtttagtg 42455898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 21895717 - 21895759
Alignment:
Q  189 tttttcccatttctgattttatggt-ccccatgacatttagtg 230  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  21895717 tttttcccctttctgattttatggtcccccatgacatttagtg 21895759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 1927772 - 1927824
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||| ||||||| ||||  |||||||||| ||| ||||||||||    
T  1927772 ggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcacc 1927824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 3353456 - 3353420
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  3353456 atcaattaatgtgtgccacgtgtgtaattccattttt 3353420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 8315135 - 8315084
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||| ||||||| ||||| |||| ||||||||| ||||||||||    
T  8315135 ggcttaattgcac-tttcccccctatattttgtcaattgtgcgattttgcacc 8315084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 10293963 - 10293911
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||  |||||||| ||||||||||    
T  10293963 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 10293911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23699403 - 23699367
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  23699403 tgtacattagatatgatggttgtgaagtgtttatgca 23699367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23717858 - 23717822
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  23717858 tgtacattagatatgatggttgtgaagtgtttatgca 23717822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23736314 - 23736278
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  23736314 tgtacattagatatgatggttgtgaagtgtttatgca 23736278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 36180702 - 36180738
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  36180702 atcaattaacgtgtgtcacgtgtgtaattccattttt 36180738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 47871175 - 47871124
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  47871175 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacc 47871124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 48160239 - 48160203
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  48160239 atcaattaatgtgtgccacgtgtgtaattccattttt 48160203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 156; Significance: 9e-83; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 102 - 401
Target Start/End: Original strand, 184840 - 185138
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttc 201  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||| | |||| |||||| ||| ||||    
T  184840 gcttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctatagttttccccctttc 184939  T
Q  202 tgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtattt 301  Q
    |||||||||||||||||||||||||||||||||       ||||||| |||||   |||||||||||||||||||||              |||||||||    
T  184940 tgattttatggtccccatgacatttagtgctggtttttttatcaattcatgtgtcccacgtgtgtaattccatttttttaaaaataaaaa-atggtattt 185038  T
Q  302 ttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||||    
T  185039 ttcagattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcacgcgcctccttctctcaaaatctgaaaaataccatttttttatt 185138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 185328 - 185197
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||| | |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||  |||    
T  185328 ggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctcttt 185229  T
Q  201 ctgattttatggtccccatgacatttagtgct 232  Q
    ||||||||||||||||||||||||||||||||    
T  185228 ctgattttatggtccccatgacatttagtgct 185197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 397
Target Start/End: Complemental strand, 185129 - 185025
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| ||| |||||| ||||   ||  ||   |||| |||||||| | |||||||||||||||| |||||||||||    
T  185129 atggtatttttcagattttgagagaaggaggcgcgtgatatttcttcttaaaatctgaaaaatcacgtgcccccttctctcaaaatctgaaaaataccat 185030  T
Q  393 gtttt 397  Q
     ||||    
T  185029 ttttt 185025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 9e-83; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 102 - 401
Target Start/End: Original strand, 25161879 - 25162176
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttc 201  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| ||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 25161978  T
Q  202 tgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtattt 301  Q
    ||||| |||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||              |||||||||    
T  25161979 tgattgtatggtccccatgacatttagtgctggtttttttatcaattaatgtgtgtcacgtgtgtaattccattttttaaaaaataaaaa-atggtattt 25162077  T
Q  302 ttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||||||||||||| || || |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||    
T  25162078 ttcagattttgagagaa-ggagcacgtgatttttccgattttaagaagaaatatcacgtgcatccttctctcaaaatctgaaaaataccatttttttatt 25162176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 101 - 398
Target Start/End: Complemental strand, 9023734 - 9023438
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||| ||||||||||| |||||| |||||| ||| |||    
T  9023734 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 9023635  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||| | |||||||| |||       |||||||||| || | |||||||||||||||||||||              ||||||||    
T  9023634 ctgattttatggtccccatcagatttagtgttggtttttttatcaattaatatgtgccacgtgtgtaattccattttttaaaaaataaaaa-atggtatt 9023536  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  9023535 tttcagattttgagagaagggggcacgtgatttttcaaattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttt 9023438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 101 - 401
Target Start/End: Complemental strand, 9380795 - 9380497
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||  ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  9380795 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttcccccttt 9380696  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||||||||||||||||       ||| ||||||||| | ||| |||||||||||||||||              ||||||||    
T  9380695 ctgattttatggtccccatgacatttagtgctgg-ttttttatccattaatgtgtgccacttgtgtaattccattttttaaaaaataaaaa-atggtatt 9380598  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatct-aaaaaataccatgttttta 399  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  9380597 tttcagattttgagagaa-ggagcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaaataccattttttta 9380499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 101 - 398
Target Start/End: Complemental strand, 293271 - 292976
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| ||| || |||||| ||| |||    
T  293271 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccgtatagttttcccccttt 293172  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    |||||||||||| |||||||| ||||||||||||       ||||||||||||| | ||| |||||||||||||||||              ||||||||    
T  293171 ctgattttatggcccccatgaaatttagtgctggtttttttatcaattaatgtgtgccacatgtgtaattccatttttaaaaaaataaaaa-atggtatt 293073  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  293072 tttcagattttgagagaa-ggagcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttt 292976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 123 - 398
Target Start/End: Complemental strand, 12758236 - 12757961
Alignment:
Q  123 ctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctgattttatggtccccatgac 222  Q
    |||||||||||||||| ||   ||||||||  ||||||| ||||||||| |||||| |||||| |||||| ||| ||||||||||||||||||| |||||    
T  12758236 ctatagtttgccaattatgtgtttttgcacgccatagttttaaacgagcaattttgccccctatagttttccccctttctgattttatggtccctatgac 12758137  T
Q  223 atttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatttttcagattttgagataagggg 322  Q
    |||||||||| |       ||||||||||||| | |||||||||||||||||||||              ||||||||||||||||||||||| ||||||    
T  12758136 atttagtgctagtttttttatcaattaatgtgtgccacgtgtgtaattccatttttttaaaaataaaaaaatggtatttttcagattttgagagaagggg 12758037  T
Q  323 gcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  12758036 gcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttt 12757961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 101 - 401
Target Start/End: Original strand, 39912054 - 39912351
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||| | |||||||||   |||||||| ||||| || | ||||||| ||||||| |||||||| |||||| |||||| ||| |||    
T  39912054 ggcttaattgcacttttcctccctatagtttattaattgtgcgattttacatc-catagttttaaacgaacgattttg-cccctatagttttcccccttt 39912151  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||| | |||||||| |||       ||||||||||||| | ||||||||||||| |||||||              ||||||||    
T  39912152 ctgattttatggtccccatcagatttagtgttggtttttt-atcaattaatgtgtgccacgtgtgtaatttcatttttttaaaaataaaaaaatggtatt 39912250  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttat 400  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  39912251 tttcagattttgagagaagggggcacgtgatttttcaaattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccatttttttat 39912350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 292782 - 292914
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  292782 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgccccctacagttttcccccttt 292881  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  292882 ctgattttatggtccccatgacatttagtgctg 292914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 28196827 - 28196698
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  28196827 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 28196728  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||||||||||||||||||||    
T  28196727 ctgattttatggtccccatgacatttagtg 28196698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 32703704 - 32703575
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccctttt 32703605  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||||||||||||||||||||    
T  32703604 ctgattttatggtccccatgacatttagtg 32703575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 101 - 380
Target Start/End: Original strand, 39744030 - 39744308
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| ||||| |||| |||| || |||||||||||||||| |||||| |||||| ||| |||    
T  39744030 ggcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctatagttttcccccttt 39744129  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtat 299  Q
    ||||||||||||||||| |||  |||||||||||       ||||||||||||| | |||||||||||||| | |||||              || ||||    
T  39744130 ctgattttatggtccccgtgatgtttagtgctgg-ttttttatcaattaatgtgtgccacgtgtgtaattctattttttaaaaaataaaaaaaatcgtat 39744228  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatct 380  Q
    ||||||||||| | || || || ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  39744229 ttttcagatttggggagaa-ggagcacgtgatttttcatattttaagaagaaatatcacgtgcctccttctctcaaaatct 39744308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 278
Target Start/End: Original strand, 169013 - 169199
Alignment:
Q  101 ggcttaattgcacttttc-ccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatt 199  Q
    |||||||||||||||||| ||| |||||||||||||||||||| |||||||||| |||| || |||||||||||||||| |||||| |||||||||| ||    
T  169013 ggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctatagtttttcccctt 169112  T
Q  200 tctgattttatggtccccatgacatttagtgctg--------gnnnnnnnatcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||||||||||||||||||||| ||        |       |||||||||||||||||||||||||||||||||||||    
T  169113 tctgattttatggtccccatgacatttagtgttgatgtgtctgtttttttatcaattaatgtgagtcacgtgtgtaattccattttt 169199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 28196346 - 28196478
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  28196346 ggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 28196445  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||||||||||||| |||||    
T  28196446 ctgattttatggtccccatgacatttaatgctg 28196478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 39744519 - 39744387
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  39744519 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 39744420  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||| ||||||||||||||||||||||||    
T  39744419 ctgattttgtggtccccatgacatttagtgctg 39744387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 4239420 - 4239291
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| | |||| ||| |||    
T  4239420 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatatttttcccccttt 4239321  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||||||||||||||||||||    
T  4239320 ctgattttatggtccccatgacatttagtg 4239291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 101 - 229
Target Start/End: Original strand, 9380307 - 9380435
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||| || ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9380406  T
Q  201 ctgattttatggtccccatgacatttagt 229  Q
    ||||||||||||||| |||||||||||||    
T  9380407 ctgattttatggtcctcatgacatttagt 9380435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 43292038 - 43292168
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttc 201  Q
    ||||||||||||||||  || |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||||||| ||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttc 43292137  T
Q  202 tgattttatggtccccatgacatttagtgct 232  Q
    |||||||||||||| ||||||||||||||||    
T  43292138 tgattttatggtcctcatgacatttagtgct 43292168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 169493 - 169364
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  169493 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 169394  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
     |||||||||||||||||||||||||||||    
T  169393 ttgattttatggtccccatgacatttagtg 169364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 48405962 - 48406090
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||| | |||| ||| |||    
T  48405962 ggcttaattgcacttttcccc-ctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctataattttcccccttt 48406060  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    |||| |||||||||||||||||||||||||    
T  48406061 ctgactttatggtccccatgacatttagtg 48406090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 9023244 - 9023376
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||||| ||||||| |||||||| ||||||| |||||| |||||| ||| |||    
T  9023244 ggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctatagttttcccccttt 9023343  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
     |||||||||||||||||||||||||| |||||    
T  9023344 atgattttatggtccccatgacatttaatgctg 9023376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 23540306 - 23540174
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||| || |||||||||| ||||||||| ||||||||||  |||||| |||||||||||||||  |||||| |||||| ||| |||    
T  23540306 ggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctatagttttcccccttt 23540207  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  23540206 ctgattttatggtccccatgacatttagtgctg 23540174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 39086677 - 39086545
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||| ||  ||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| |||||| |||||| ||| |||    
T  39086677 ggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctatagttttcccccttt 39086578  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||  |||||||||||||||||    
T  39086577 ctgattttatggtctgcatgacatttagtgctg 39086545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 104 - 401
Target Start/End: Original strand, 12757770 - 12758075
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||| ||||||||  ||||||||||| ||||||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||||  ||||||    
T  12757770 ttaattgtacttttcct-tctatagtttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttgtcccctatagtttttcctctttctg 12757868  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnn--------atcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnnga-t 294  Q
    |||||||||||||||||| |||||||||||                ||||||||||||| | |||||||||||||||||||||              | |    
T  12757869 attttatggtccccatgatatttagtgctgatatctgtttttttttatcaattaatgtgtggcacgtgtgtaattccatttttataaaaataaaaaaaat 12757968  T
Q  295 ggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgt 394  Q
    ||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| |||||||| | |||||||||||||||| ||||||||||| |    
T  12757969 ggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcacgtgcccccttctctcaaaatctgaaaaataccattt 12758068  T
Q  395 ttttatt 401  Q
    |||||||    
T  12758069 ttttatt 12758075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 32703225 - 32703357
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||| |||||| | ||||| |||||||||||||||| |||||| |||||| ||| |||    
T  32703225 ggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctatagttttcccccttt 32703324  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||| ||||||||| |||||    
T  32703325 ctgattttatggtccccgtgacatttaatgctg 32703357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 115 - 232
Target Start/End: Complemental strand, 48406425 - 48406308
Alignment:
Q  115 tttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctgattttatggtc 214  Q
    ||||||| ||||| |||||||||||||| ||||||||||  |||||| |||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  48406425 tttcccccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtc 48406326  T
Q  215 cccatgacatttagtgct 232  Q
    ||||||||||||| ||||    
T  48406325 cccatgacatttaatgct 48406308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 26207800 - 26207671
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||||||| ||| |||  ||||||||||||||| |||||| |||||| | | |||    
T  26207800 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctccttt 26207701  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||| ||||||| ||||||||    
T  26207700 ctgattttatggttcccatgatatttagtg 26207671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 26207361 - 26207492
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||| |||  ||||||||||||||| |||||| |||||| | | |||    
T  26207361 ggcttaattgcactttccccc-ctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctccttt 26207459  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| ||||||||||||| |||||    
T  26207460 ctgattttatggttcccatgacatttaatgctg 26207492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 23539841 - 23539971
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||| |||||  |||||||||||||||||| |||||||||| |||||||  |||||| |||||||| |||||| | |||| | | |||    
T  23539841 ggcttaattgcactttccccct--atagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctatatttttcctccttt 23539938  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| |||||||||||||||||||    
T  23539939 ctgattttatggttcccatgacatttagtgctg 23539971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 43292411 - 43292284
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||||||| || ||||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| || ||||||| |||    
T  43292411 ggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatag-ttttccccttt 43292313  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    |||||||||| ||||| |||||||||||||    
T  43292312 ctgattttat-gtcccaatgacatttagtg 43292284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 44468955 - 44468849
Alignment:
Q  123 ctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctgattttatggtccccatgac 222  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| |||||| | | |||||||||||||| | ||||||||    
T  44468955 ctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcctcctttctgattttatgat-cccatgac 44468857  T
Q  223 atttagtg 230  Q
    ||||||||    
T  44468856 atttagtg 44468849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 25162345 - 25162235
Alignment:
Q  123 ctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctgattttatggtccccatgac 222  Q
    ||||| |||| ||||||||  |||||||||  ||||||| |||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||    
T  25162345 ctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgac 25162246  T
Q  223 atttagtgctg 233  Q
    |||||||||||    
T  25162245 atttagtgctg 25162235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 101 - 401
Target Start/End: Complemental strand, 39912540 - 39912234
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||| |||||||||  ||||||||||  ||||||||| |||||||| | ||||||| |||||||| ||||||| | |||| |||||||| | |||    
T  39912540 ggcttaattacacttttcct-tctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagtgattttgccacctatagtttttcgccttt 39912442  T
Q  201 ctgattttatggtccccatgacatttagtgctg-------gnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnnga 293  Q
     ||||||||| ||||||||||||||||||||||               ||||||||||||| | |||||||||||||  ||||||              |    
T  39912441 atgattttatagtccccatgacatttagtgctgatatgtccgttttttatcaattaatgtgtgccacgtgtgtaattttattttttaaaaaataaaaaaa 39912342  T
Q  294 tggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatg 393  Q
    |||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| |||||||| | |||||||||||||||| |||||||||||     
T  39912341 tggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatttgaaaaatcacgtgcccccttctctcaaaatctgaaaaataccatt 39912242  T
Q  394 tttttatt 401  Q
    ||||||||    
T  39912241 tttttatt 39912234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 50678779 - 50678856
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  50678779 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 50678856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 292982 - 293085
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| |||||||| |||||||||||||||||| |||||||||||    
T  292982 atggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcacgtg-ctccttctctcaaaatctgaaaaataccat 293080  T
Q  393 gtttt 397  Q
     ||||    
T  293081 ttttt 293085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 9023444 - 9023548
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| |||||||| | |||||||||||||||| |||||||||||    
T  9023444 atggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatttgaaaaatcacgtgcccccttctctcaaaatctgaaaaataccat 9023543  T
Q  393 gtttt 397  Q
     ||||    
T  9023544 ttttt 9023548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 637929 - 637890
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  637929 tgtacactagatctgatggttgtgaagtgtttatgcacgg 637890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1729605 - 1729644
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1729605 tgtacactagatctgatggttgtgaagtgtttatgcacgg 1729644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4168433 - 4168394
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4168433 tgtacactagatctgatggttgtgaagtgtttatgcacgg 4168394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 26447402 - 26447441
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26447402 tgtacactagatctgatggttgtgaagtgtttatgcacgg 26447441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 36096526 - 36096423
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||  ||| |   |||||||| ||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttttcccctttctg 36096427  T
Q  204 attt 207  Q
    ||||    
T  36096426 attt 36096423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 207
Target Start/End: Original strand, 36095817 - 36095922
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| ||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||  |||| |  |||||||| |||    
T  36095817 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccct-atctttttccccttt 36095915  T
Q  201 ctgattt 207  Q
    |||||||    
T  36095916 ctgattt 36095922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 50679478 - 50679401
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||| | |||||||||| |||  || ||||||||||||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttg 50679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 56505693 - 56505750
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcata 158  Q
    ||||||||||||||||||||| ||||  |||||||||||||| |||||||||| ||||    
T  56505693 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccata 56505750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 397
Target Start/End: Complemental strand, 25162167 - 25162064
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| ||||  ||||||||| ||||   ||  ||   |||| |||||||| |||||||||||||||||| |||||||||||    
T  25162167 atggtatttttcagattttgagagaaggatgcacgtgatatttcttcttaaaatcggaaaaatcacgtg-ctccttctctcaaaatctgaaaaataccat 25162069  T
Q  393 gtttt 397  Q
     ||||    
T  25162068 ttttt 25162064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 50563719 - 50563755
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  50563719 tgtacactagatctgatggttgtgaagtgtttatgca 50563755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27764315 - 27764276
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  27764315 tgtacactagatctgatggttgcgaagtgtttatgcacgg 27764276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 36621691 - 36621730
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  36621691 tgtacattagatctgatggttgtgaagtgtttatgcacgg 36621730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 397
Target Start/End: Original strand, 9380513 - 9380610
Alignment:
Q  299 tttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttt 397  Q
    ||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  9380513 tttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcacgtg-ctccttctctcaaaatctgaaaaataccatttttt 9380610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 401
Target Start/End: Complemental strand, 32703462 - 32703416
Alignment:
Q  355 tcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  32703462 tcacgtgcctccttctctcaaaatctgaaaaataccatttttttatt 32703416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 397
Target Start/End: Original strand, 9380455 - 9380610
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtattttt-cagattttgagataagggggcacgtgatttttcagat 340  Q
    ||||||||||||| | |||||||||||||||||||||              ||||||||||| |||||||||||| |||| |||||||||| ||||   |    
T  9380455 atcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaaaatggtattttttcagattttgagagaaggaggcacgtgatatttcttct 9380554  T
Q  341 tttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttt 397  Q
    |  ||   |||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  9380555 taaaatctgaaaaatcacgtg-ctccttctctcaaaatctgaaaaataccatttttt 9380610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 43051306 - 43051229
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||| ||||| || ||||  |||||||||||||  |||||||||| |||  || ||||||||||||||||    
T  43051306 ggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttg 43051229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 39744370 - 39744334
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  39744370 atcaattaatgtgtgtcacgtgtgtaattccattttt 39744334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 169255 - 169298
Alignment:
Q  355 tcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||    
T  169255 tcacgtgcctccttctctcaaaatctgaaaaataccattttttt 169298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22181235 - 22181274
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  22181235 tgtacactaaatctgatggttgtgaagtttttatgcacgg 22181274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 28196585 - 28196542
Alignment:
Q  355 tcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||    
T  28196585 tcacgtgcctccttctctcaaaatctgaaaaataccattttttt 28196542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 38485664 - 38485703
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  38485664 tgtacattagatctgatggttgtgaagcgtttatgcacgg 38485703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 336
Target Start/End: Complemental strand, 43292213 - 43292170
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttc 336  Q
    ||||||||||||||||||||||| || |||||||||||| ||||    
T  43292213 atggtatttttcagattttgagagaatggggcacgtgatatttc 43292170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 45256050 - 45256011
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  45256050 tgtacactatatctgatagttgtgaagtgtttatgcacgg 45256011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 39415578 - 39415528
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgca 151  Q
    ||||||| ||||||||| ||||||||  ||||| |||||||||||||||||    
T  39415578 ggcttaactgcactttttccctctatcttttgctaattgtgcaattttgca 39415528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 398
Target Start/End: Original strand, 43292169 - 43292219
Alignment:
Q  348 agaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    |||||||||||||| | | |||||||||||||| ||||||||||| |||||    
T  43292169 agaaatatcacgtgccccattctctcaaaatctgaaaaataccattttttt 43292219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 401
Target Start/End: Original strand, 48406202 - 48406248
Alignment:
Q  355 tcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    ||||||| |||||||||||||||||| |||||||| || ||||||||    
T  48406202 tcacgtgcctccttctctcaaaatctgaaaaatacaatttttttatt 48406248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 169292 - 169255
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtga 330  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  169292 atggtatttttcagattttgagagaaggaggcacgtga 169255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 13198606 - 13198655
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||||||||||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcacc 13198655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 401
Target Start/End: Complemental strand, 23540066 - 23540029
Alignment:
Q  364 tccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  23540066 tccttctctcaaaatctgaaaaataccatttttttatt 23540029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 23540155 - 23540122
Alignment:
Q  245 aattaatgtgagtcacgtgtgtaattccattttt 278  Q
    |||||||||| |||||||||||||||||||||||    
T  23540155 aattaatgtgtgtcacgtgtgtaattccattttt 23540122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 28196548 - 28196585
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtga 330  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  28196548 atggtatttttcagattttgagagaaggaggcacgtga 28196585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 32703425 - 32703462
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtga 330  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  32703425 atggtatttttcagattttgagagaaggaggcacgtga 32703462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 397
Target Start/End: Complemental strand, 39086433 - 39086392
Alignment:
Q  356 cacgtgtctccttctctcaaaatctaaaaaataccatgtttt 397  Q
    |||||| |||||||||||||||||| ||||||||||| ||||    
T  39086433 cacgtgcctccttctctcaaaatctgaaaaataccatttttt 39086392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 47219252 - 47219179
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgatttt 177  Q
    ||||||||| ||||| |||||||  ||||| |||||||| ||||||||||| ||  || ||||| |||||||||    
T  47219252 ttaattgcatttttcacctctatcttttgctaattgtgcgattttgcaccttatgtttttaaaccagcgatttt 47219179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 3930533 - 3930482
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  3930533 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacc 3930482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 6386535 - 6386567
Alignment:
Q  5 cactagatctgatggttgtgaagtgtttatgca 37  Q
    ||||| |||||||||||||||||||||||||||    
T  6386535 cactaaatctgatggttgtgaagtgtttatgca 6386567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 8181992 - 8182044
Alignment:
Q  102 gcttaattgcacttttcccctctatagttt-gccaattgtgcaattttgcacc 153  Q
    |||||||||||||||| ||| |||| |||| ||||||||||| ||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcacc 8182044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 13198960 - 13198908
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||  |||||||| ||||||||||    
T  13198960 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 13198908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 16555871 - 16555819
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||||||||||||||||  |||  ||||| |||||||| ||||||||||    
T  16555871 ggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcacc 16555819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 18077256 - 18077204
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||||||||||||| || ||||  ||||| |||||||| ||||||||||    
T  18077256 ggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcacc 18077204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 22681933 - 22681881
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||  ||||  ||||  |||||||||||||||||||    
T  22681933 ggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 23539987 - 23540023
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  23539987 atcaattaatgtgtgccacgtgtgtaattccattttt 23540023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 24775837 - 24775785
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||  ||||  |||| ||||||||| ||||||||||    
T  24775837 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcacc 24775785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 39
Target Start/End: Original strand, 26578189 - 26578217
Alignment:
Q  11 atctgatggttgtgaagtgtttatgcacg 39  Q
    |||||||||||||||||||||||||||||    
T  26578189 atctgatggttgtgaagtgtttatgcacg 26578217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 28196678 - 28196642
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  28196678 atcaattaatgtgtgccacgtgtgtaattccattttt 28196642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 39086397 - 39086433
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtg 329  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  39086397 atggtatttttcagattttgagagaaggaggcacgtg 39086433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 48406110 - 48406146
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  48406110 atcaattaatgtgtgccacgtgtgtaattccattttt 48406146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 49178866 - 49178818
Alignment:
Q  105 taattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||||||||| || ||||  |||||||||||||| ||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcacc 49178818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 56506628 - 56506580
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttg 149  Q
    |||||||||||||||||| ||  |||  |||||||||||||||||||||    
T  56506628 ggcttaattgcacttttcacccttatcttttgccaattgtgcaattttg 56506580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 104 - 401
Target Start/End: Original strand, 20418891 - 20419187
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| ||||||  || ||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 20418990  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtattttt 303  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||              || ||||||||    
T  20418991 attttatggtccccatgacatttagtgctggtttttttatcaattaatgtgtgtcacgtgtgtaattccattttttaaaaaataaaaaaattgtattttt 20419090  T
Q  304 cagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||||||||||| ||  | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  20419091 cagattttgagagaa-agagcatgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccatttttttatt 20419187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 101 - 398
Target Start/End: Original strand, 22740156 - 22740452
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  22740156 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 22740255  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||| | ||| |||||||||| ||||||              ||||||||    
T  22740256 ctgattttatggtccccatgacatttagtgctggtttttttatcaattaatgtgtgccacatgtgtaattctattttttaaaaaataaaaaaatggtatt 22740355  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||| ||||||||| || || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  22740356 tttcacattttgagagaa-ggagcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttt 22740452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 101 - 398
Target Start/End: Original strand, 37971960 - 37972256
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||| || || ||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||||||| |||    
T  37971960 ggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttccccttt 37972059  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtat 299  Q
    |||||||||||||||||||||||||||| |||||       ||||||||||||| |||||||||||||||||| |||||              |||||||    
T  37972060 ctgattttatggtccccatgacatttagcgctgg-ttttttatcaattaatgtgtgtcacgtgtgtaattccattttttaaaaaattaaaaaaatggtat 37972158  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    |||||||||||||||| || || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  37972159 ttttcagattttgagagaa-ggagcacgtgattttttagattttaagaagaaatatcacgtgtctccttctctcaaaatctgaaaaataccattttttt 37972256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 101 - 401
Target Start/End: Complemental strand, 18864455 - 18864157
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||| ||| |||    
T  18864455 ggcttaattgtacttttcccc-ctatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctatagttttcccccttt 18864357  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtat 299  Q
    |||||||||||||||||||||||||||||||| |       ||||||||||||| | |||||||||||||||| |||||              || ||||    
T  18864356 ctgattttatggtccccatgacatttagtgct-gattttttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaaaaatcgtat 18864258  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttta 399  Q
    |||||||||||||||| || || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||    
T  18864257 ttttcagattttgagagaa-ggagcacgtgatttttcagattttaagaagaaatatcatgtgcctccttctctcaaaatctgaaaaataccattttttta 18864159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 104 - 386
Target Start/End: Complemental strand, 42419079 - 42418797
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctc-atagttctaaacgagcgattttgtcccctaaagtttttcccatttct 202  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||||||| | |||||| |||||||||||||||| |||||| |||||| ||| |||||    
T  42419079 ttaattgcacttttcccc-ctatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctatagttttccccctttct 42418981  T
Q  203 gattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtattt 301  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||| | |||||||||||||||| |||||              ||| |||||    
T  42418980 gattttatggtccccatgacatttagtgctggtttttttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaaataaaaaaatgttattt 42418881  T
Q  302 ttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaa 386  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  42418880 ttcagattttgagagaa-ggggcacgtgatttttcagattttaagaagaaatatcacgtgcctcattctctcaaaatctgaaaaa 42418797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 10533034 - 10533166
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  10533034 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10533133  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  10533134 ctgattttatggtccccatgacatttagtgctg 10533166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 37888833 - 37888965
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  37888833 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 37888932  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  37888933 ctgattttatggtccccatgacatttagtgctg 37888965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 37889313 - 37889181
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| ||||||  || |||    
T  37889313 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccttt 37889214  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  37889213 ctgattttatggtccccatgacatttagtgctg 37889181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 37972450 - 37972318
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  37972450 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 37972351  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    | |||||||||||||||||||||||||||||||    
T  37972350 cagattttatggtccccatgacatttagtgctg 37972318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 104 - 233
Target Start/End: Original strand, 18863970 - 18864099
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| ||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 18864069  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||||||||||||||||    
T  18864070 attttatggtccccatgacatttagtgctg 18864099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 17156967 - 17157099
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||| ||||||||||| |||||| |||||| ||| |||    
T  17156967 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 17157066  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  17157067 ctgattttatggtccccatgacatttagtgctg 17157099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 20419378 - 20419246
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  20419378 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 20419279  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||| |||||||||||||||    
T  20419278 ctgattttatggtccccgtgacatttagtgctg 20419246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 3205147 - 3205018
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| | ||||| |||||||||||||||| |||||| |||||| ||| |||    
T  3205147 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttcccccttt 3205048  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||||||||||||||||||||    
T  3205047 ctgattttatggtccccatgacatttagtg 3205018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 9035347 - 9035217
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttt-tcccatt 199  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| |||| ||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccctt 9035248  T
Q  200 tctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||||||  |||||||||||||    
T  9035247 tctgattttatggtccagatgacatttagtg 9035217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 293 - 390
Target Start/End: Complemental strand, 13741857 - 13741760
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaatacc 390  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  13741857 atggtatttttcagattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacc 13741760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 13744286 - 13744155
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  13744286 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 13744188  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
     |||||||||||||||||||| |||||||||||    
T  13744187 ttgattttatggtccccatgatatttagtgctg 13744155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 29292922 - 29293054
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||| | ||| |||  ||||||||||||||| |||||| |||||| ||| |||    
T  29292922 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctatagttttcccccttt 29293021  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| |||||||||||||||||||    
T  29293022 ctgattttatggttcccatgacatttagtgctg 29293054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 38826967 - 38826835
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||| ||||||| || ||||| |||||| |||||| ||| |||    
T  38826967 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctatagttttcccccttt 38826868  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||| |||||||||||||||||||||    
T  38826867 ctgattttatgatccccatgacatttagtgctg 38826835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 9034867 - 9035000
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctc-atagttctaaacgagcgattttgtcccctaaagtttttcccatt 199  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||| |||||| | |||||| |||||||||||||||| |||||| |||||| ||| ||    
T  9034867 ggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctatagttttccccctt 9034966  T
Q  200 tctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||| |||||    
T  9034967 tctgattttatggtccccatgacatttaatgctg 9035000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 48359320 - 48359450
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||  |||||| || ||| ||| |||    
T  48359320 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatag-tttcccccttt 48359417  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  48359418 ctgattttatggtccccatgacatttagtgctg 48359450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 3204669 - 3204799
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||| |||||  |||||||||||||||||| |||||||||| ||||||| ||||||||| |||||| |||||| |||||| ||  |||    
T  3204669 ggcttaattgcactttccccct--atagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctcttt 3204766  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||||||||||||| |||||    
T  3204767 ctgattttatggtccccatgacatttattgctg 3204799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 13741557 - 13741688
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||||||| ||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||  |||    
T  13741557 ggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccacttt 13741656  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||| |||||||||||| |||||||||||||||    
T  13741657 ctga-tttatggtccccgtgacatttagtgctg 13741688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 29293400 - 29293268
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||||||  ||| |||  ||||||||||||||| |||||| |||||| ||| |||    
T  29293400 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctatagttttcccccttt 29293301  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| ||||||||||||| |||||    
T  29293300 ctgattttatggttcccatgacatttactgctg 29293268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 42418591 - 42418723
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||| ||||||||||| ||||||||||| |||||||| |||||| | |  |||||| |||||||||||||||| |||||| |||||| ||| |||    
T  42418591 ggcttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctatagttttcccccttt 42418690  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    || ||||||||||||||||||||||||||||||    
T  42418691 ctaattttatggtccccatgacatttagtgctg 42418723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 22740641 - 22740514
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||  ||||| || ||||||| ||| ||    
T  22740641 ttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatag-ttttcccctttatg 22740544  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    ||| ||||||||||||||||||||||||||    
T  22740543 attctatggtccccatgacatttagtgctg 22740514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 101 - 229
Target Start/End: Complemental strand, 36527852 - 36527724
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||||||   ||||||||||||||| ||| |||||||| | ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  36527852 ggcttaattgcatttttccctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccccttt 36527753  T
Q  201 ctgattttatggtccccatgacatttagt 229  Q
    |||||||||||||| ||||||||||||||    
T  36527752 ctgattttatggtctccatgacatttagt 36527724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 105 - 221
Target Start/End: Complemental strand, 48359707 - 48359592
Alignment:
Q  105 taattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctga 204  Q
    ||||||||||||| ||| ||||||||| |||||||||| |||||||||| |||||||  ||||||||||||||| |||||| |||||| ||| |||||||    
T  48359707 taattgcactttttccc-ctatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctatagttttccccctttctga 48359609  T
Q  205 ttttatggtccccatga 221  Q
    ||||||||| |||||||    
T  48359608 ttttatggttcccatga 48359592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 104 - 226
Target Start/End: Original strand, 36527387 - 36527508
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||| ||| |||||||||| ||||||||| |||||||||| ||||||| ||||||| | |||||  ||| || |||||||||| ||||||    
T  36527387 ttaattgcactttttccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcaatttttccccttatagtttttcccctttctg 36527485  T
Q  204 attttatggtccccatgacattt 226  Q
    ||||||| |||||||||||||||    
T  36527486 attttatagtccccatgacattt 36527508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 44599489 - 44599566
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  44599489 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 44599566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 44600189 - 44600112
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  44600189 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 44600112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 16199031 - 16198971
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagtt 161  Q
    ||||||||||||||||| |||  ||||||||||||||||||| |||||||||| |||||||    
T  16199031 ggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagtt 16198971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 401
Target Start/End: Complemental strand, 22740446 - 22740339
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| |||||||| |||||||||||||||| | |||||||||||    
T  22740446 atggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcacgtg-ctccttctctcaaaatgtgaaaaataccat 22740348  T
Q  393 gtttttatt 401  Q
     ||||||||    
T  22740347 ttttttatt 22740339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 5757462 - 5757423
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5757462 tgtacactagatctgatggttgtgaagtgtttatgcacgg 5757423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 13741760 - 13741863
Alignment:
Q  295 ggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgt 394  Q
    ||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| |||||||| | |||||||||||||||| ||||||||||| |    
T  13741760 ggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcacgtgcccccttctctcaaaatctgaaaaataccattt 13741859  T
Q  395 tttt 398  Q
    ||||    
T  13741860 tttt 13741863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 179
Target Start/End: Complemental strand, 46816365 - 46816287
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgt 179  Q
    ||||||||||||||||| ||| ||||  ||| |||||| ||| |||||||||| |||| || |||||||||||||||||    
T  46816365 ggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttgt 46816287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 13863313 - 13863390
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||| ||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  13863313 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 13863390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 13864010 - 13863934
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| | |||||||| |||| || ||||||||||||||||    
T  13864010 ggcttaattgcacttttcacccctatcttttgccaattgtgcga-tttgcaccccatatttttaaacgagcgattttg 13863934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 3687710 - 3687658
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  3687710 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 3687658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 9412379 - 9412327
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  9412379 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 9412327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 30428948 - 30428909
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  30428948 tgtacactagatctgatggttgtgaaatgtttatgcacgg 30428909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 46024102 - 46024063
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  46024102 tgtacactatatctgatggttgtgaagtgtttatgcacgg 46024063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 401
Target Start/End: Complemental strand, 9035105 - 9035059
Alignment:
Q  355 tcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  9035105 tcacgtgcctccttctctcaaaatctgaaaaataccatttttttatt 9035059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 399
Target Start/End: Complemental strand, 37972250 - 37972145
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| | |||||||| ||||   ||  ||    ||| |||||||| |||||||||||||||||| |||||||||||    
T  37972250 atggtatttttcagattttgagagaaggagacacgtgatatttcttcttaaaatctaaaaaatcacgtg-ctccttctctcaaaatctgaaaaataccat 37972152  T
Q  393 gttttta 399  Q
     ||||||    
T  37972151 tttttta 37972145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 398
Target Start/End: Original strand, 18864115 - 18864270
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatttttcagattttgagataagggggcacgtgatttttcagatt 341  Q
    ||||||||||||| ||||||||||||||| |||||||              ||||||||||||||||||||||| |||| ||||| |||| ||||   ||    
T  18864115 atcaattaatgtgtgtcacgtgtgtaatttcatttttttaaaaataaaaaaatggtatttttcagattttgagagaaggaggcacatgatatttcttctt 18864214  T
Q  342 ttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
      ||   |||| |||||||| |||||||||||||||||| |||||||| || |||||    
T  18864215 aaaatctgaaaaatcacgtg-ctccttctctcaaaatctgaaaaatacgattttttt 18864270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 37889076 - 37889121
Alignment:
Q  355 tcacgtgtctccttctctcaaaatctaaaaaataccatgtttttat 400  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||    
T  37889076 tcacgtgcctccttctctcaaaatctgaaaaataccatttttttat 37889121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 46573490 - 46573523
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttat 34  Q
    ||||||||||||||||||||||||||||||||||    
T  46573490 tgtacactagatctgatggttgtgaagtgtttat 46573523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48691067 - 48691030
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcac 38  Q
    |||||||||||||||||||||||||||||| |||||||    
T  48691067 tgtacactagatctgatggttgtgaagtgtctatgcac 48691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 13772955 - 13772903
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  13772955 ggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcacc 13772903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 401
Target Start/End: Complemental strand, 20419178 - 20419071
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| ||||| || ||| |||||||||||||| |||||||| ||    
T  20419178 atggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcacatg-ctctttctctcaaaatctgaaaaatacaat 20419080  T
Q  393 gtttttatt 401  Q
     ||||||||    
T  20419079 ttttttatt 20419071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 38826817 - 38826781
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  38826817 atcaattaatgtgtgtcacgtgtgtaattccattttt 38826781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15974926 - 15974965
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  15974926 tgtacactaaatatgatggttgtgaagtgtttatgcacgg 15974965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28396797 - 28396758
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  28396797 tgtacactagatctgatgattgtgaaatgtttatgcacgg 28396758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 33798006 - 33797967
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  33798006 tgtatactagatctgatggttgtgaaatgtttatgcacgg 33797967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 48690970 - 48690931
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  48690970 tgtacactagatttgatggttgtgaactgtttatgcacgg 48690931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 27335625 - 27335655
Alignment:
Q  7 ctagatctgatggttgtgaagtgtttatgca 37  Q
    |||||||||||||||||||||||||||||||    
T  27335625 ctagatctgatggttgtgaagtgtttatgca 27335655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 36527619 - 36527577
Alignment:
Q  356 cacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    |||||| |||||||||||||||||| ||||||||||| |||||    
T  36527619 cacgtgcctccttctctcaaaatctgaaaaataccattttttt 36527577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 8643820 - 8643743
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    ||||||||||||||||||  | ||||  ||| |||||||||| |||||||||| |||  |  ||||||||||||||||    
T  8643820 ggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttg 8643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 9035068 - 9035105
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtga 330  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  9035068 atggtatttttcagattttgagagaaggaggcacgtga 9035105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 12279818 - 12279781
Alignment:
Q  3 tacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  12279818 tacactagatctaatggttgtgaagtctttatgcacgg 12279781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 18925062 - 18925115
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacct 154  Q
    ||||||||||||||||||  | ||||  ||||| ||||||||||||||||||||    
T  18925062 ggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacct 18925115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 37889113 - 37889076
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtga 330  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  37889113 atggtatttttcagattttgagagaaggaggcacgtga 37889076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 3204815 - 3204851
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  3204815 atcaattaatgtgtgccacgtgtgtaattccattttt 3204851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 9035197 - 9035161
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  9035197 atcaattaatgtgtgccacgtgtgtaattccattttt 9035161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 18925373 - 18925324
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||  |||||||| ||||| |||||||| ||||||||||    
T  18925373 gcttaattgcactttt--cctctatattttgctaattgtgcgattttgcacc 18925324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 23686421 - 23686472
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||| ||||||||||||    
T  23686421 ggcttaattgcacttttcccc-ctatcttttgctaattgtacaattttgcacc 23686472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 36527531 - 36527567
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  36527531 atcaattaatgtgtgccacgtgtgtaattccattttt 36527567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 36527583 - 36527619
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtg 329  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  36527583 atggtatttttcagattttgagagaaggaggcacgtg 36527619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 42418740 - 42418776
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  42418740 atcaattaatgtgtgccacgtgtgtaattccattttt 42418776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44141241 - 44141277
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  44141241 tgtacactaaatcagatggttgtgaagtgtttatgca 44141277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 48359466 - 48359502
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  48359466 atcaattaatgtgtgccacgtgtgtaattccattttt 48359502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 98)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 101 - 389
Target Start/End: Original strand, 6703460 - 6703746
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||  ||||||||| |||||||||| |||||||||||||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  6703460 ggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcccctttt 6703559  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||| | |||||||||||||||||||||              ||||||||    
T  6703560 ctgattttatggtccccatgacatttagtgctgg--tttttatcaattaatgtgtgccacgtgtgtaattccatttttttaaaaataaaaaaatggtatt 6703657  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaatac 389  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||    
T  6703658 tttcagattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcacatacctccttctctcaaaatctgaaaaatac 6703746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 101 - 398
Target Start/End: Original strand, 28633720 - 28634016
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||||||  ||||||||||||||||| | |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  28633720 ggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 28633819  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||| ||||||||||||||||||||       ||||||||||||| | |||||||||||||||||||||              || |||||    
T  28633820 ctgattttatggttcccatgacatttagtgctggtttttttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaataaaaaa-atagtatt 28633918  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||||||||| |||||    
T  28633919 ttttagattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcacacgcctccttctctcaaaatctgaaaaataccattttttt 28634016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 104 - 398
Target Start/End: Original strand, 46823846 - 46824138
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||  ||||||| |||||||||||||||| |||||| |||||| ||| ||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctg 46823945  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtattttt 303  Q
    |||||||||| |||||||||||||||| | |       ||||||||||||| | |||||||||||||||||||||              |||||||||||    
T  46823946 attttatggtacccatgacatttagtg-ttgattttttatcaattaatgtgtgccacgtgtgtaattccatttttttaaaaataaaaaaatggtattttt 46824044  T
Q  304 cagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| || |||||    
T  46824045 -agattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacaattttttt 46824138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 101 - 398
Target Start/End: Complemental strand, 48105170 - 48104872
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  48105170 ggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 48105071  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtat 299  Q
    ||||||||||||||||||||| ||||||||||||       ||||||||||| | | |||||||||||||||| |||||              || ||||    
T  48105070 ctgattttatggtccccatgatatttagtgctggtttttttatcaattaatgcgtgccacgtgtgtaattccatttttttaaaaaataaaaaaatcgtat 48104971  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| |||| |||||    
T  48104970 tttttagattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcacgcgcctccttctctcaaaatctgaaaaatgccattttttt 48104872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 101 - 401
Target Start/End: Complemental strand, 27172595 - 27172302
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| || || |||||||||||||| |||||||| | ||| ||| |||||||||||||||| |||||| |||||| ||| |||    
T  27172595 ggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttg-cccctatagttttcccccttt 27172497  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||  | |||||||||||||||||||                ||||||||    
T  27172496 ctgattttatggtccccatgacatttagtgctggtttttttatcaattaatgtctgccacgtgtgtaattccattt------aaaaaaaaaaatggtatt 27172403  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttat 400  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||    
T  27172402 tttcagattttgagagaagggggcacgtgatttttcagatttttagaagaaatatcacgtccctccttctctcaaaatctgaaaaataccatttttttat 27172303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 102 - 399
Target Start/End: Complemental strand, 13918920 - 13918621
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttc 201  Q
    |||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||| |||||| |||  ||     
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccctatagttttccccccttt 13918821  T
Q  202 tgattttatggtccccatgacatttagtgctg-gnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtat 299  Q
    ||||||||||||||||||||||||||||||||         ||||||||||||| |||||||||||||||||| |||||              |||||||    
T  13918820 tgattttatggtccccatgacatttagtgctgtttttttttatcaattaatgtgtgtcacgtgtgtaattccattttttaaaaaataaaaaaaatggtat 13918721  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttta 399  Q
    |||| ||||||||||| || ||||||| ||||||||||||||||||||||||||||||| ||  ||||| ||||||||||| ||||||||||| ||||||    
T  13918720 tttttagattttgagagaaaggggcacatgatttttcagattttaagaagaaatatcacatgcttccttttctcaaaatctgaaaaataccattttttta 13918621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 101 - 401
Target Start/End: Complemental strand, 26815173 - 26814876
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| | |||| ||| |||    
T  26815173 ggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttcccccttt 26815074  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtat 299  Q
    ||||||||||||||||||||| |||||||||  |       ||||||||||||| | |||||||||||||||| |||||              |||||||    
T  26815073 ctgattttatggtccccatgatatttagtgc--gtttttttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaaaaatggtat 26814976  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttta 399  Q
    |||||||||||||||| || ||  | |||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||| ||||||    
T  26814975 ttttcagattttgagagaa-ggaacgcgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatc-cgaaaataccattttttta 26814878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 101 - 398
Target Start/End: Complemental strand, 21687520 - 21687220
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||| |||||||||||| ||||| |||||||||||||| |||||| ||||||||||| |||||||||||||||  || ||  |||||| ||| |||    
T  21687520 ggcttaatagcacttttcccc-ctataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttttccctctgtagttttcccccttt 21687422  T
Q  201 ctgattttatggtccccatgacatttagtgctg--------gnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnng 292  Q
    |||||||||||||||||||||||||||||||||        |       ||||||||||||| | |||||||||   |||||||||                  
T  21687421 ctgattttatggtccccatgacatttagtgctgatgtgtctgtttttttatcaattaatgtgtgccacgtgtgt---tccatttttttaaaaatataaaa 21687325  T
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  21687324 atggtatttttcagattttgagagaatggggcacgtgatttt-cagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccat 21687226  T
Q  393 gttttt 398  Q
     |||||    
T  21687225 tttttt 21687220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 101 - 278
Target Start/End: Complemental strand, 32163097 - 32162920
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| ||| || |||||| ||| |||    
T  32163097 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccttatagttttcccccttt 32162998  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||   |||||||||||||||||||||    
T  32162997 ctgattttatggtccccatgacatttagtgctgatttttttatcaattaatgtgttccacgtgtgtaattccattttt 32162920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 4692487 - 4692355
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||  | |||| |||||||||| |||    
T  4692487 ggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttacctcctatagtttttccccttt 4692388  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  4692387 ctgattttatggtccccatgacatttagtgctg 4692355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 278
Target Start/End: Original strand, 26814694 - 26814870
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||| | |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  26814694 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 26814793  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||||||||||||||||||||| |        ||||||||||||| | |||||||||||||||||||||    
T  26814794 ctgattttatggtccccatgacatttagtgc-gttttttttatcaattaatgtgtgccacgtgtgtaattccattttt 26814870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 104 - 233
Target Start/End: Original strand, 48104681 - 48104810
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| ||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 48104780  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||||||||||||||||    
T  48104781 attttatggtccccatgacatttagtgctg 48104810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 50430132 - 50430003
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| ||||||  || ||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctg 50430033  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||||||||||||||||    
T  50430032 attttatggtccccatgacatttagtgctg 50430003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 9347126 - 9347258
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  9347126 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9347225  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||| |||||||||||| ||||    
T  9347226 ctgattttatggtccgcatgacatttagcgctg 9347258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 20480168 - 20480299
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  20480168 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 20480266  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  20480267 ctgattttatggtccccatgacatttagtgctg 20480299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 21687025 - 21687157
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||||||| |||||||||||||||| |||||| |||||| | | |||    
T  21687025 ggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctccttt 21687124  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  21687125 ctgattttatggtccccatgacatttagtgctg 21687157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 46824332 - 46824200
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  46824332 ggcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 46824233  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
     ||||||||||||||||||||||||||||||||    
T  46824232 ttgattttatggtccccatgacatttagtgctg 46824200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 49317752 - 49317883
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||| |||||||||||||||  |||||| |||||| ||| |||    
T  49317752 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctatagttttcccccttt 49317850  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  49317851 ctgattttatggtccccatgacatttagtgctg 49317883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 101 - 398
Target Start/End: Complemental strand, 20480665 - 20480373
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||  |||||| ||||||||||||||   |||||| ||| |||||| |||    
T  20480665 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgatttc--cccctatagtgtttccccttt 20480569  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtat 299  Q
    ||||||||||||||||||||||||||| |||| |       ||  ||||||||| | ||||||||| |||| | |||||              ||| |||    
T  20480568 ctgattttatggtccccatgacatttaatgct-gattttttatgcattaatgtgtgccacgtgtgtgattctatttttttaaaaataaaaaaaatgatat 20480470  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||| |||||||||||| || || ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| ||| |||||    
T  20480469 tttgcagattttgagagaa-ggagcacgtgatttttcagattttaa-aagaaatatcacgtgcctccttctctcaaaatctgaaaaatatcattttttt 20480373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 163 - 401
Target Start/End: Original strand, 44223746 - 44223983
Alignment:
Q  163 taaacgagcgattttgtcccctaaagtttttcccatttctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgt 262  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||||||||| | |||||||||||||||||       ||||||||||| | | || ||    
T  44223746 taaacgagcgattttgccccctatagtttttcccctttctgattttatggtctc-atgacatttagtgctggtttttt-atcaattaatgcgtgccatgt 44223843  T
Q  263 gtgtaattccatttttnnnnnnnnnnnnnga-tggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtg 361  Q
    |||||||| |||||||              | | |||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||    
T  44223844 gtgtaatttcatttttaaaaaaaataaaaaaatagtatttttcagattttgagagaagggggcacatgatttttcatattttaagaagaaatatcacgtg 44223943  T
Q  362 tctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
     |||||||||||||||||| ||||||||||| ||||||||    
T  44223944 cctccttctctcaaaatctgaaaaataccatttttttatt 44223983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 9347604 - 9347476
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  9347604 ggcttaattgcactttccccc-ctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9347506  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||| ||||||||||||||||    
T  9347505 ctgattttatggttcccatgacatttagtg 9347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 28634208 - 28634079
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| ||||||| |||||||| |||||| |||||| ||| ||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctttctg 28634109  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||||||||||||||||    
T  28634108 attttatggtccccatgacatttagtgctg 28634079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 42611665 - 42611536
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||||||||||| || |||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||| |||||| |||||||||| ||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctatagtttttcccctttctg 42611566  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||| |||||||||||||    
T  42611565 attttatggtccccataacatttagtgctg 42611536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 999578 - 999447
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  999578 ggcttaattgcacttttcccc-ctatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctatagttttcccccttt 999480  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  999479 ctgattttatggtccccatgacatttagtgctg 999447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 6703948 - 6703816
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | | || |||||| ||| |||    
T  6703948 ggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgcctcatatagttttcccccttt 6703849  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||| |||||||||||||||||    
T  6703848 ctgattttatggtcctcatgacatttagtgctg 6703816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 50615674 - 50615543
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||| ||||||||||| |||||| |||||| ||| |||    
T  50615674 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 50615576  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  50615575 ctgattttatggtccccatgacatttagtgctg 50615543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 50623502 - 50623371
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||| ||||||||||| |||||| |||||| ||| |||    
T  50623502 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 50623404  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  50623403 ctgattttatggtccccatgacatttagtgctg 50623371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 101 - 398
Target Start/End: Original strand, 27172116 - 27172416
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  27172116 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 27172214  T
Q  201 ctgattttatggtccccatgacatttagtgctg----gnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatgg 296  Q
    ||||||||||| | |||||||||||||||| ||            ||||||||||||| | ||||||||||||| |||||||              ||||    
T  27172215 ctgattttatgcttcccatgacatttagtgttgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatttcatttttttaaaaataaaaaaatgg 27172314  T
Q  297 tatttttcagattttgagataagggggcacgtgatttttcagattttaagaa---gaaatatcacgtgtctccttctctcaaaatctaaaaaataccatg 393  Q
    ||||||||||||||||||| |||| || ||||||| ||||   || ||| ||   |||| |||||||| | |||||||||||||||| |||||||||||     
T  27172315 tatttttcagattttgagagaaggagggacgtgatatttc---ttctaaaaatctgaaaaatcacgtgcccccttctctcaaaatctgaaaaataccatt 27172411  T
Q  394 ttttt 398  Q
    |||||    
T  27172412 ttttt 27172416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 42611188 - 42611314
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | |||| |||||| ||| ||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgcctcctatagttttccccctttctg 42611287  T
Q  204 attttatggtccccatgacatttagtg 230  Q
    |||||||||| ||||||||||||||||    
T  42611288 attttatggttcccatgacatttagtg 42611314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 103 - 233
Target Start/End: Complemental strand, 50526524 - 50526394
Alignment:
Q  103 cttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttct 202  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 50526425  T
Q  203 gattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| ||||||||||| |||||    
T  50526424 gattttatggtccacatgacatttaatgctg 50526394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 13918446 - 13918575
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||  |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  13918446 ggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 13918545  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    |||||||||||||| | |||||||||||||    
T  13918546 ctgattttatggtcactatgacatttagtg 13918575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 49318219 - 49318088
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||||||| | |||||||  ||||||||||||||| |||||| |||||| ||| |||    
T  49318219 ggcttaattgcactttccccc-ctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttcccccttt 49318121  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| |||||||||||||||||||    
T  49318120 ctgattttatggttcccatgacatttagtgctg 49318088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 20371040 - 20371169
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||||||||| ||||||| |||||||||||||||| |||||  || ||||||| |||    
T  20371040 ggcttaattgcactttccccct--atagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctgtag-ttttccccttt 20371136  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||| ||||||||||||||||    
T  20371137 ctgattttatggtccctatgacatttagtgctg 20371169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 20371406 - 20371274
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctc-atagttctaaacgagcgattttgtcccctaaagtttttcccatt 199  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||||| ||||||||| |||||| |||||| |||||  ||| ||    
T  20371406 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctt 20371308  T
Q  200 tctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||| |||||    
T  20371307 tctgattttatggtccccatgacatttaatgctg 20371274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 50429656 - 50429787
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||| ||||||||||| |||| ||||| |||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||   | |||    
T  50429656 ggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcatccttt 50429755  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| |||||||||||||||||||    
T  50429756 ctgattttatggt-cccatgacatttagtgctg 50429787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 50949615 - 50949487
Alignment:
Q  105 taattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctga 204  Q
    |||||||||||| |||| |||||||||| ||||||||| |||||||| ||||| |||  ||||||||||||||| |||||| |||||||||| |||||||    
T  50949615 taattgcactttccccccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccctatagtttttcccctttctga 50949516  T
Q  205 ttttatggtccccatgacatttagtgctg 233  Q
    ||||||||| | |||||||||||||||||    
T  50949515 ttttatggttctcatgacatttagtgctg 50949487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 44911025 - 44911154
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||| |||| ||||| |||||||||||||| |||||||||| ||| |||  ||||||||||||||| |||||| |||||| ||| |||    
T  44911025 ggcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 44911124  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||| ||||||| ||||||||    
T  44911125 ctgattttatggttcccatgatatttagtg 44911154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 999115 - 999239
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||||| |||||||||| ||||||||| |||||||| | ||||||| |||||||||||||||| |||||| || ||||| | ||||||    
T  999115 ttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatag-ttttctcctttctg 999212  T
Q  204 attttatggtccccatgacatttagtg 230  Q
    ||||||||||| |||||||||||||||    
T  999213 attttatggtctccatgacatttagtg 999239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 104 - 401
Target Start/End: Complemental strand, 44224169 - 44223866
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||||||||| ||||  | |||||| |||||||||  |||||||| | ||||||| ||||||||||||||||||||||| |||||| ||| ||||||    
T  44224169 ttaattgcactttgcccca-tgtagtttaccaattgtgtgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttacccctttctg 44224071  T
Q  204 attttatggtccccatgacatttagtgctg-------gnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatgg 296  Q
    ||||||||||||  ||||||||||||||||               ||||||||||||| ||||||||||||||| |||||||              ||||    
T  44224070 attttatggtccttatgacatttagtgctgatatgtctgttttttatcaattaatgtgtgtcacgtgtgtaatttcattttttaaaaaataaaaaaatgg 44223971  T
Q  297 tatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttt 396  Q
    ||||||||||||||||||| |||| |||||||||| ||||   ||  || | |||| |||| ||| | |||||||||||||||| |||||||| || |||    
T  44223970 tatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatatgaaaaatcatgtgcccccttctctcaaaatctgaaaaatactattttt 44223871  T
Q  397 ttatt 401  Q
    |||||    
T  44223870 ttatt 44223866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 47498301 - 47498431
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||||||| | ||||||| ||||| |||||||||| || ||| ||||||  || |||    
T  47498301 ggcttaattgcactttccccct--atagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttgccctctatagttttctcccttt 47498398  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
     ||||||||||||| ||||||||||||||||||    
T  47498399 ttgattttatggtctccatgacatttagtgctg 47498431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 49318496 - 49318367
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||||||| |||||||||  ||||||||| |||||||| | ||||||| ||||||||||||||| ||||||| ||||||  || |||    
T  49318496 ggcttaattgcatttttcccc-ctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgattttatcccctatagtttt--cccttt 49318400  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| |||||||||||||||||||    
T  49318399 ctgattttatggttcccatgacatttagtgctg 49318367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 32162734 - 32162855
Alignment:
Q  106 aattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctgat 205  Q
    |||||||||||| |   ||||||||||||||||||||||||||||||| ||||||| |||||||||       ||||||| |||||||||| ||||||||    
T  32162734 aattgcactttttcttcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagca------tcccctatagtttttcccctttctgat 32162827  T
Q  206 tttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||| |||||    
T  32162828 tttatggtccccatgacatttaatgctg 32162855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 44911488 - 44911359
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||||| |||| ||| |||||||||||||||||||| ||||||||||  || |||  ||||||||||||||| |||||| |||||| | | ||||||    
T  44911488 ttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 44911389  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    |||||||||| | ||||||||||| |||||    
T  44911388 attttatggttctcatgacatttaatgctg 44911359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 4692022 - 4692152
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||| | |||||||||||||| |||||| | |||||||| |  ||||||  |||||||| |||||| |||||| |||||  ||| |||    
T  4692022 ggcttaattgcacttt-ctcctctatagtttgctaattgtacgattttgcatcctatagtttaaaacgagccattttgccccctatagtttccccc-ttt 4692119  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| |||||||||||||||||||    
T  4692120 ctgattttatggttcccatgacatttagtgctg 4692152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 19008804 - 19008692
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |||||||||| |||||||  ||||| || |||||| |||||| | |||| ||| |||    
T  19008804 ggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctataattttcccccttt 19008705  T
Q  201 ctgattttatggt 213  Q
    ||||||| |||||    
T  19008704 ctgatttgatggt 19008692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 101 - 217
Target Start/End: Complemental strand, 39692054 - 39691938
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| ||||| |||| ||||||||| |||||||||| |||  || |||||| | |||||||  |||||   |||| ||| |||    
T  39692054 ggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctatctttttcccccttt 39691955  T
Q  201 ctgattttatggtcccc 217  Q
    |||||||||||||||||    
T  39691954 ctgattttatggtcccc 39691938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 49284409 - 49284486
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  49284409 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 49284486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 50949164 - 50949237
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgatttt 177  Q
    ||||||| |||||||||  ||||||| |||||||||||| |||||||||||||| |||  ||||||||||||||    
T  50949164 ttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgatttt 50949237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 18056859 - 18056820
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18056859 tgtacactagatctgatggttgtgaagtgtttatgcacgg 18056820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 179683 - 179646
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcac 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  179683 tgtacactagatctgatggttgtgaagtgtttatgcac 179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 401
Target Start/End: Complemental strand, 46824129 - 46824025
Alignment:
Q  296 gtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtt 395  Q
    |||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| |||||||| | |||||||||||||||| ||||||||||| ||    
T  46824129 gtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcacgtgcccccttctctcaaaatct-aaaaataccatttt 46824031  T
Q  396 tttatt 401  Q
    ||||||    
T  46824030 tttatt 46824025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 50615240 - 50615289
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgc 150  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  50615240 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 50623068 - 50623117
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgc 150  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  50623068 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 8109047 - 8108995
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  8109047 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 8108995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23320075 - 23320111
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  23320075 tgtacactagatctgatggttgtgaagtgtttatgca 23320111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 401
Target Start/End: Complemental strand, 28634010 - 28633902
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| |||  ||||| ||||   ||  ||   |||| |||||||| | ||||||||||||||||||||||||| ||    
T  28634010 atggtatttttcagattttgagagaaggaggcgtgtgatatttcttcttaaaatctgaaaaatcacgtgcccccttctctcaaaatctaaaaaatactat 28633911  T
Q  393 gtttttatt 401  Q
     ||||||||    
T  28633910 ttttttatt 28633902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37639417 - 37639381
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  37639417 tgtacactagatctgatggttgtgaagtgtttatgca 37639381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 47955306 - 47955358
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  47955306 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 47955358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 401
Target Start/End: Original strand, 48104878 - 48104986
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    |||| |||||||||||||||||| |||| ||| |||||| ||||   ||  ||   |||| |||||||| | ||||||||||||||||||||||||| ||    
T  48104878 atggcatttttcagattttgagagaaggaggcgcgtgatatttcttcttaaaatctgaaaaatcacgtgcccccttctctcaaaatctaaaaaatacgat 48104977  T
Q  393 gtttttatt 401  Q
     ||||||||    
T  48104978 ttttttatt 48104986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 6002237 - 6002314
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||| ||||||||  |||||||||| |||  || ||||||||||||||||    
T  6002237 ggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttg 6002314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 401
Target Start/End: Complemental strand, 6703746 - 6703641
Alignment:
Q  296 gtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtt 395  Q
    |||||||||||||||||||| |||| || | ||||| ||||   ||  ||   |||| |||||||| | |||||||||||||||| ||||||||||| ||    
T  6703746 gtatttttcagattttgagagaaggaggtatgtgatatttcttcttaaaatctgaaaaatcacgtgcccccttctctcaaaatctgaaaaataccatttt 6703647  T
Q  396 tttatt 401  Q
    ||||||    
T  6703646 tttatt 6703641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 401
Target Start/End: Original strand, 9347369 - 9347414
Alignment:
Q  356 cacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  9347369 cacgtgcctccttctctcaaaatctgaaaaataccatttttttatt 9347414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 19007735 - 19007783
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgc 150  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  19007735 ggcttaattgcactttccccc-ctatagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 32162904 - 32162867
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtga 330  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  32162904 atggtatttttcagattttgagagaagggggcacgtga 32162867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8402301 - 8402337
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  8402301 tgtacactagatctgatggttatgaagtgtttatgca 8402337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 401
Target Start/End: Original strand, 21687226 - 21687333
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| |||||||| | | |||||||||||||| |||||||||||    
T  21687226 atggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaa-atcacgtgccccattctctcaaaatctgaaaaataccat 21687324  T
Q  393 gtttttatt 401  Q
     ||| ||||    
T  21687325 ttttatatt 21687333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35198171 - 35198207
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35198171 tgtacactagatctgatggctgtgaagtgtttatgca 35198207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 48190771 - 48190823
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||||||||||||| || ||||  |||||||||||||| ||||||||||    
T  48190771 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 48190823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 50949289 - 50949325
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  50949289 atcaattaatgtgtgtcacgtgtgtaattccattttt 50949325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 16115926 - 16115887
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  16115926 tgtacattagatttgatggttgtgaagtgtttatgcacgg 16115887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 22149750 - 22149699
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctc 155  Q
    |||||||||||||||||| ||||  ||||| |||||||| ||||||||||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacctc 22149699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 22348114 - 22348079
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgc 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  22348114 tgtacactagatatgatggttgtgaagtgtttatgc 22348079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 47498547 - 47498497
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||||||||||||||| |||||||||| |||||||||  |||||||||    
T  47498547 gcttaattgcacttttcccc-ctatagtttgtcaattgtgcggttttgcacc 47498497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 50429897 - 50429940
Alignment:
Q  355 tcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||    
T  50429897 tcacgtgcctccttctctcaaaatctgaaaaataccattttttt 50429940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 233
Target Start/End: Original strand, 50615294 - 50615329
Alignment:
Q  198 tttctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||| |||||    
T  50615294 tttctgattttatggtccccatgacatttaatgctg 50615329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 233
Target Start/End: Original strand, 50623122 - 50623157
Alignment:
Q  198 tttctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||| |||||    
T  50623122 tttctgattttatggtccccatgacatttaatgctg 50623157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 50949379 - 50949336
Alignment:
Q  355 tcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||    
T  50949379 tcacgtgcctccttctctcaaaatctgaaaaataccattttttt 50949336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 17518653 - 17518604
Alignment:
Q  103 cttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  17518653 cttaattgcacttttcccc-ctatcttttgccaattgtgcgattttgcacc 17518604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 30802471 - 30802437
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatg 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  30802471 tgtacactagatctgatggttgtgaaatgtttatg 30802437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 1176839 - 1176888
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||||||||| ||| ||||  |||| ||||||||||||||||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcacc 1176888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 40
Target Start/End: Complemental strand, 11421660 - 11421631
Alignment:
Q  11 atctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||    
T  11421660 atctgatggttgtgaagtgtttatgcacgg 11421631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 40
Target Start/End: Complemental strand, 34369726 - 34369697
Alignment:
Q  11 atctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||    
T  34369726 atctgatggttgtgaagtgtttatgcacgg 34369697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 42611425 - 42611380
Alignment:
Q  356 cacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||||| |||||||||||| ||||| ||||||||||| ||||||||    
T  42611425 cacgtgcctccttctctcagaatctgaaaaataccatttttttatt 42611380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 50429934 - 50429897
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtga 330  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  50429934 atggtatttttcagattttgagagaaggaggcacgtga 50429897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 50949342 - 50949379
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtga 330  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  50949342 atggtatttttcagattttgagagaaggaggcacgtga 50949379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 999258 - 999294
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  999258 atcaattaatgtgtgccacgtgtgtaattccattttt 999294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 999429 - 999393
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  999429 atcaattaatgtgtgccacgtgtgtaattccattttt 999393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 4692168 - 4692204
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  4692168 atcaattaatgtgtgccacgtgtgtaattccattttt 4692204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 9347275 - 9347311
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  9347275 atcaattaatgtgtgccacgtgtgtaattccattttt 9347311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 9347405 - 9347369
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtg 329  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  9347405 atggtatttttcagattttgagagaaggaggcacgtg 9347369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 13589712 - 13589661
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  13589712 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacc 13589661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 21687174 - 21687210
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  21687174 atcaattaatgtgtgccacgtgtgtaattccattttt 21687210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 39690794 - 39690846
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||| |||||||||| ||| ||||| || ||||||||||| ||||||||||    
T  39690794 ggcttagttgcactttttccccctatatttggccaattgtgcgattttgcacc 39690846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 48191409 - 48191357
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||||||||||||| || ||||  ||||||||| |||| ||||||||||    
T  48191409 ggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcacc 48191357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 50429986 - 50429950
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  50429986 atcaattaatgtgtgccacgtgtgtaattccattttt 50429950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 50615527 - 50615491
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  50615527 atcaattaatgtgtgccacgtgtgtaattccattttt 50615491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 50623355 - 50623319
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  50623355 atcaattaatgtgtgccacgtgtgtaattccattttt 50623319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 50949471 - 50949435
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  50949471 atcaattaatgtgtgccacgtgtgtaattccattttt 50949435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 101 - 398
Target Start/End: Complemental strand, 37397199 - 37396906
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||| || ||||||| ||||||||||| |||| |||||| || ||| ||| |||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctatagatttcccccttt 37397100  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||| | |||||||||||||||||||||              ||||||||    
T  37397099 ctgattttatggtccccatgacatttagtgctgg-ttttttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaaaatggtatt 37397001  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||||| |||||    
T  37397000 tttcagattttgagagaaggaggcacgtgatttttcagattttaagaagaaatatcacgtg---cctcctctcaaaatctaaaaaataccattttttt 37396906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 104 - 398
Target Start/End: Complemental strand, 33727156 - 33726861
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||| |||||||| ||| |||||||||| |||||||| ||||||||| |||||||| |||||||||||||||| |||||| |||||| ||| ||||||    
T  33727156 ttaattacacttttctcctttatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctatagttttccccctttctg 33727057  T
Q  204 attttatggtccccatgacatttagtgctgg-nnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatttt 302  Q
    |||||||||||||||||||||||||||||||        ||||||||||||| | |||||||||||||||||||||              || |||||||    
T  33727056 attttatggtccccatgacatttagtgctggttttttttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaaaatagtatttt 33726957  T
Q  303 tcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||| |||||    
T  33726956 tcagattttgagagaagggggcacgtgatttttcagattttaaaaagaaatatcacgcgcctccttctctcaaaatctgaaaaataccattttttt 33726861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 104 - 401
Target Start/End: Complemental strand, 15444698 - 15444401
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||| ||| ||||| ||| |||||||||| |||||||||| ||||||| ||||||||||||||| ||||||| |||||| ||  ||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctg 15444599  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtattttt 303  Q
    |||||||||||||||||||||||||||||||       |||||||||| || | ||||||||| |||| ||||||              || ||||||||    
T  15444598 attttatggtccccatgacatttagtgctggtttttttatcaattaatatgtgccacgtgtgtgattctattttttaaaaaataaaaaaatagtattttt 15444499  T
Q  304 cagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||| ||||||||||| ||||||||    
T  15444498 cagattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcactcgcatccttctctcaaaatctgaaaaataccatttttttatt 15444401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 101 - 398
Target Start/End: Original strand, 6198658 - 6198953
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||| ||  ||| || | |||||||||| ||||||||||  |||||| |||||||||||||||| |||||| |||||| |||||||    
T  6198658 ggcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccattt 6198757  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||| | |||||||||||||||| ||||              || |||||    
T  6198758 ctgattttatggtccccatgacatttagtgctggtttttttatcaattaatgtgtgccacgtgtgtaattcca-ttttaaaaaaaataaaaaatagtatt 6198856  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||||||||||| || || |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  6198857 tttcagattttgagagaa-ggagcacatgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttt 6198953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 101 - 392
Target Start/End: Original strand, 41662521 - 41662819
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||  || |||    
T  41662521 ggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttctcccttt 41662620  T
Q  201 ctgattttatggtccccatgacatttagtgctg--------gnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnng 292  Q
    || |||||||||| |||||||||||||||||||        |       ||||||||||||| | |||||||||||||||||||||                  
T  41662621 ctaattttatggttcccatgacatttagtgctgatgtgtttgtttttttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaa- 41662719  T
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||    
T  41662720 atggtatttttcagattttaagagaatggggcacgtgatttttcagattttaagaagaaatatcacatgcctccttctctcaaaatctgaaaaataccat 41662819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 101 - 362
Target Start/End: Original strand, 17431287 - 17431545
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||||||  ||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  17431287 ggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctatagttttcccccttt 17431386  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||||||||||||||||       ||||||   |||| | |||||||||||||||||||||              |  |||||    
T  17431387 ctgattttatggtccccatgacatttagtgctggtttttttatcaat---tgtgtgccacgtgtgtaattccatttttaaaaaaaataaaaaaatgtatt 17431483  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgt 362  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  17431484 tttcagattttgagagaagggggcacatgatttttcagattttaagaagaaatatcacgtgt 17431545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 104 - 399
Target Start/End: Complemental strand, 25439176 - 25438893
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||| ||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| || ||| |||||  ||| ||| ||    
T  25439176 ttaattgcactttttccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagtttccccctttt-tg 25439079  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtattttt 303  Q
    ||||||||||||||||||||||||||| | |       ||||||||||||| |  |||||||||| |||||||||              |||||||||||    
T  25439078 attttatggtccccatgacatttagtgttagtttttttatcaattaatgtgtgctacgtgtgtaaatccatttttaaaa----------atggtattttt 25438989  T
Q  304 cagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttta 399  Q
     ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  25438988 tagattttgagagaaaggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctgaaaaatacaattttttta 25438893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 101 - 401
Target Start/End: Original strand, 16169174 - 16169471
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||  |||||| ||||||  || |||    
T  16169174 ggcttaattgcacttttcatc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctcccttt 16169272  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||| | ||||||||| ||||||       ||||||||||||| | ||| |||||||||||||||||              ||| ||||    
T  16169273 ctgattttatggtcctcgtgacatttaatgctggtttttttatcaattaatgtgtgccacatgtgtaattccatttttaaaaaaataaaaa-atgatatt 16169371  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttat 400  Q
    ||||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||  || |||||||    
T  16169372 tttcagattttgagagaa-tgagcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatccgaaaaatataatttttttat 16169470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 104 - 398
Target Start/End: Original strand, 34498125 - 34498416
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||| ||| |||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||  ||||| || ||| ||| ||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccctatag-tttccccctttctg 34498223  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtatttt 302  Q
    ||||||||||||||||||||||||||||||        ||||||||||||| | |||||||||||||||| |||||              ||||||||||    
T  34498224 attttatggtccccatgacatttagtgctg--atttttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaaataaaaaaatggtatttt 34498321  T
Q  303 tcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||||||||| || || ||||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||| || |||||    
T  34498322 tcagattttgagagaa-ggagcacgtggtttttcagattttaagaagaaatatcacgtgcctcgttctctaaaaatctgaaaaatacaattttttt 34498416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 24473822 - 24473690
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||  | |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| |||    
T  24473822 ggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttcccccttt 24473723  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  24473722 ctgattttatggtccccatgacatttagtgctg 24473690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 37396708 - 37396840
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  37396708 ggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 37396807  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  37396808 ctgattttatggtccccatgacatttagtgctg 37396840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 6199150 - 6199018
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||  | |||||||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  6199150 ggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccccttt 6199051  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||| |||||||||||||||||||||    
T  6199050 ctgattttatgatccccatgacatttagtgctg 6199018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 16169661 - 16169529
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||| | |||||||||  ||||||||||| |||||| || |||||| |||||||||||||||| |||||| |||||||||| |||    
T  16169661 ggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttccccttt 16169562  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| |||||||||||||||||||    
T  16169561 ctgattttatggttcccatgacatttagtgctg 16169529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 355
Target Start/End: Complemental strand, 20861692 - 20861436
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||| ||| ||||||| |||||||||||| |||||||||| ||||||| |||||||||||||||| | |||| | |||| ||| |||    
T  20861692 ggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcctcctataattttcccccttt 20861593  T
Q  201 ctgattttatggtccccatgacatttagtgct-ggnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggta 298  Q
    |||||||||||||||||||||||||||||||| |        |||||||| ||||   |||||||||||||||| |||||              ||||||    
T  20861592 ctgattttatggtccccatgacatttagtgctagttttttttatcaattattgtgtaccacgtgtgtaattccattttttaaaaaataaaaaaaatggta 20861493  T
Q  299 tttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatat 355  Q
    ||||| | ||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  20861492 ttttttaaattttgagagaaaggggcacatgatttttcagattttaagaagaaatat 20861436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 9623502 - 9623634
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| | | |||||||||||||||||||| |||||||||| ||||||| ||||||||| |||||| |||||| |||||| ||  |||    
T  9623502 ggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttcccttttt 9623601  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||| |||||||||||||||    
T  9623602 ctgattttatggtccccttgacatttagtgctg 9623634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 34498609 - 34498477
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||| ||||||| ||||| || |||| || |||||| | |||| ||| |||    
T  34498609 ggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctatatttttcccccttt 34498510  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  34498509 ctgattttatggtccccatgacatttagtgctg 34498477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 24473343 - 24473472
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||| |||||||||||||||||||  |||||||||| |||| || |||| ||||||||||| |||||| |||||  ||| |||    
T  24473343 ggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctatagtttccccccttt 24473442  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||||||||||||||||||||    
T  24473443 ctgattttatggtccccatgacatttagtg 24473472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 103 - 233
Target Start/End: Original strand, 15444213 - 15444343
Alignment:
Q  103 cttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttct 202  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| ||   ||||||| ||||||||||||||||  ||||| |||||| ||| ||| |    
T  15444213 cttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgattttgctccctatagttttccccctttat 15444312  T
Q  203 gattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||| ||||||||||||||||||    
T  15444313 gattttatggtctccatgacatttagtgctg 15444343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 293 - 401
Target Start/End: Complemental strand, 9623800 - 9623692
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| || ||| ||| |||||||||  |||||||| ||    
T  9623800 atggtatttttcagattttgagagaagggggcacatgatttttcagattttaagaagaaatatcacatgcctcattcactcaaaatcagaaaaatacaat 9623701  T
Q  393 gtttttatt 401  Q
     ||||||||    
T  9623700 ttttttatt 9623692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 101 - 207
Target Start/End: Original strand, 2856526 - 2856632
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||| | |||||| | |||||||||||||||||||| |||||||||| |||||||  |||||  ||||||| ||||||| |||||| ||| |||    
T  2856526 ggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgttcgattttatcccctatagttttcccccttt 2856625  T
Q  201 ctgattt 207  Q
    |||||||    
T  2856626 ctgattt 2856632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 25438794 - 25438852
Alignment:
Q  103 cttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagtt 161  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagtt 25438852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 13026635 - 13026712
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| ||||||||||||||  || ||||||||||||||||    
T  13026635 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttg 13026712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 33726734 - 33726797
Alignment:
Q  170 gcgattttgtcccctaaagtttttcccatttctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||| | |||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  33726734 gcgattttgcctcctatagttttccccctttctgattttatggtccccatgacatttagtgctg 33726797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 9823415 - 9823338
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  9823415 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 9823338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 13936723 - 13936799
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    ||||||||||||||||||||| ||||  ||| |||||||||| |||||||||| |||| || ||||||||||||||||    
T  13936723 ggcttaattgcacttttcccc-ctatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttg 13936799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 39724102 - 39724025
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  39724102 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 39724025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4836691 - 4836730
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4836691 tgtacactagatctgatggttgtgaagtgtttatgcacgg 4836730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4842136 - 4842175
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4842136 tgtacactagatctgatggttgtgaagtgtttatgcacgg 4842175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8550579 - 8550540
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8550579 tgtacactagatctgatggttgtgaagtgtttatgcacgg 8550540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32987435 - 32987474
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32987435 tgtacactagatctgatggttgtgaagtgtttatgcacgg 32987474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 12281124 - 12281178
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctc 155  Q
    ||||||||||||||||||||| ||||  |||||||||||||| ||||||||||||    
T  12281124 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctc 12281178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 13027332 - 13027258
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    ||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 13027258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 401
Target Start/End: Original strand, 33726867 - 33726975
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| ||| |||||| ||||   ||  ||   |||| |||||||| | |||||||||||||||| |||||||| ||    
T  33726867 atggtatttttcagattttgagagaaggaggcgcgtgatatttctttttaaaatctgaaaaatcacgtgcccccttctctcaaaatctgaaaaatactat 33726966  T
Q  393 gtttttatt 401  Q
     ||||||||    
T  33726967 ttttttatt 33726975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 37396965 - 37397017
Alignment:
Q  349 gaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||| |||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  37396965 gaaaaatcacgtgcctccttctctcaaaatctgaaaaataccatttttttatt 37397017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 41662457 - 41662405
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 41662405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 7058189 - 7058150
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  7058189 tgtacactagatcggatggttgtgaagtgtttatgcacgg 7058150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15260841 - 15260880
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  15260841 tgtacactagatttgatggttgtgaagtgtttatgcacgg 15260880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39022050 - 39022011
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  39022050 tgtacactagatctgatgattgtgaagtgtttatgcacgg 39022011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 765736 - 765786
Alignment:
Q  103 cttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 765786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 217
Target Start/End: Original strand, 15442765 - 15442879
Alignment:
Q  103 cttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttct 202  Q
    |||||||||| |||||||| ||||| || ||||||||||  |||||||||| |||  || |||||| |||||||||  |||||   |||| ||  ||| |    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttgcaccctatccttttcccgctttgt 15442864  T
Q  203 gattttatggtcccc 217  Q
    |||||||||||||||    
T  15442865 gattttatggtcccc 15442879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 9822748 - 9822825
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||  ||||||||| |||||||||| |||  || ||||||||||||||||    
T  9822748 ggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 9822825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 13937443 - 13937366
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    ||||||||||||||||||||| ||||  |||| ||||||||| | |||||||| |||  || |||||||| |||||||    
T  13937443 ggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttg 13937366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 22851390 - 22851467
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||| ||||||||| |||||||||| |||  || ||||| ||||||||||    
T  22851390 ggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttg 22851467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 3463999 - 3463947
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| || |||||||    
T  3463999 ggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcacc 3463947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 6198947 - 6198852
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaatac 389  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| |||| ||| |||||||||||||||||| ||||||||    
T  6198947 atggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcatgtg-ctccttctctcaaaatctgaaaaatac 6198852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7614143 - 7614107
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    |||||| ||||||||||||||||||||||||||||||    
T  7614143 tgtacattagatctgatggttgtgaagtgtttatgca 7614107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 15156239 - 15156187
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||| ||||||||| ||||||||||    
T  15156239 ggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 15156187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15181866 - 15181830
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    |||||||||||||||||| ||||||||||||||||||    
T  15181866 tgtacactagatctgatgcttgtgaagtgtttatgca 15181830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 16169513 - 16169477
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  16169513 atcaattaatgtgtgtcacgtgtgtaattccattttt 16169477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 37752084 - 37752136
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  37752084 ggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcacc 37752136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1208784 - 1208745
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  1208784 tgtacactagatcttatggttgtaaagtgtttatgcacgg 1208745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 24473584 - 24473627
Alignment:
Q  355 tcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||    
T  24473584 tcacgtgcctccttctctcaaaatctgaaaaataccattttttt 24473627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 33726696 - 33726743
Alignment:
Q  103 cttaattgcacttttcccctctatagtttgccaattgtgcaattttgc 150  Q
    ||||||||||||||| ||| ||||||||| |||||||||| |||||||    
T  33726696 cttaattgcactttttccccctatagtttaccaattgtgcgattttgc 33726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 34498341 - 34498303
Alignment:
Q  363 ctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  34498341 ctccttctctcaaaatctgaaaaataccatttttttatt 34498303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 43162234 - 43162287
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctc 155  Q
    ||||||||||||||||||||| ||||| ||||  |||||||| ||||||||||||    
T  43162234 ggcttaattgcacttttcccc-ctatattttgttaattgtgcgattttgcacctc 43162287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 3307338 - 3307415
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||| ||||| || ||||  |||| ||||||||| |||||||| | |||| || ||||| ||||||||||    
T  3307338 ggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttg 3307415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 24473621 - 24473584
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtga 330  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  24473621 atggtatttttcagattttgagagaaggaggcacgtga 24473584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 15155883 - 15155935
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||  |||||||| ||||||||||    
T  15155883 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 15155935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 401
Target Start/End: Original strand, 15444410 - 15444518
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| ||||  ||  ||||| ||||   ||  ||   |||| |||||||| | |||||||||||||||| |||||||| ||    
T  15444410 atggtatttttcagattttgagagaaggatgcgagtgatatttcttcttaaaatctgaaaaatcacgtgcccccttctctcaaaatctgaaaaatactat 15444509  T
Q  393 gtttttatt 401  Q
     ||||||||    
T  15444510 ttttttatt 15444518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 16928942 - 16928994
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||||||||||| |||| ||||  ||||| |||||||| ||||||||||    
T  16928942 ggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcacc 16928994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 16929296 - 16929244
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||||||||||||| || ||||  ||||| |||||||| ||||||||||    
T  16929296 ggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcacc 16929244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 34498461 - 34498425
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  34498461 atcaattaatgtgtgccacgtgtgtaattccattttt 34498425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 37752470 - 37752418
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||  |||||||| ||||||||||    
T  37752470 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 37752418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 39723415 - 39723479
Alignment:
Q  114 ttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    ||||| |||||||  |||||||||||||| |||||||| | |||  || ||||||||||||||||    
T  39723415 ttttcacctctatcttttgccaattgtgcgattttgcatcccatgtttttaaacgagcgattttg 39723479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 43246230 - 43246178
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||  ||||||||||    
T  43246230 ggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcacc 43246178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 8e-74; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 101 - 401
Target Start/End: Original strand, 22754657 - 22754954
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||| ||||| | |||||||| |||||| |||||||||| |||    
T  22754657 ggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttccccttt 22754755  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||| ||||||||||||       ||||||||||||| |||||||||||||||||||||||              ||| ||||    
T  22754756 ctgattttatggtccccatgatatttagtgctggtttttttatcaattaatgtgtgtcacgtgtgtaattccattttttaaaaaataaaaa-atgatatt 22754854  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttat 400  Q
    ||||||||||||||| || || |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||    
T  22754855 tttcagattttgagagaa-ggagcacgtgattcttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccacttttttat 22754953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 101 - 401
Target Start/End: Complemental strand, 22684411 - 22684114
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||| ||||| | |||||||| |||||| |||||||||| |||    
T  22684411 ggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttttccccttt 22684313  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||| ||||||||||||       ||||||||||||| |||||||||||||||||||||||              ||| ||||    
T  22684312 ctgattttatggtccccatgatatttagtgctggtttttttatcaattaatgtgtgtcacgtgtgtaattccattttttaaaaaataaaaa-atgatatt 22684214  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttat 400  Q
    ||  ||||||||||| || || |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||    
T  22684213 ttggagattttgaga-aaaggagcacgtgattcttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccacttttttat 22684115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 104 - 398
Target Start/End: Original strand, 33973867 - 33974158
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||| | |||||||  |||||||||| || |||||| |||||| || | |||||| || |||||||||||||||||||| |||||||||  |||||     
T  33973867 ttaattgtatttttccctcctatagtttgtcagttgtgcgattttgtactttatagttttacacgagcgattttgtcccctatagtttttcc--tttcta 33973964  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtattttt 303  Q
    ||||||||||||||||||||||||||| |||       ||||||||||||| | |||||||||||||||||||||              || ||||||||    
T  33973965 attttatggtccccatgacatttagtgttggtttttt-atcaattaatgtgcgccacgtgtgtaattccatttttaaaattaaaaaaaaatagtattttt 33974063  T
Q  304 cagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||| ||| |||||    
T  33974064 cagattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcacatgcctccttctctcaaaatctgaaaaatatcattttttt 33974158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 104 - 398
Target Start/End: Original strand, 32733560 - 32733855
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||| |||| |||| |||||||||||||||||||| | | |||||||| | ||||||| ||||||||| |||||| | |||| |||||||||| ||||||    
T  32733560 ttaagtgcattttttccctctatagtttgccaattatacgattttgcatcccatagttttaaacgagcaattttgcctcctatagtttttcccctttctg 32733659  T
Q  204 attttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnnga--tggtattt 301  Q
    |||||||||| |||||||||||||||||||         ||||||||| || | ||||||||||||| |||||||              |  || |||||    
T  32733660 attttatggttcccatgacatttagtgctgattttttt-tcaattaatatgtgccacgtgtgtaatttcattttttaaaaaattaaaaaaaatgatattt 32733758  T
Q  302 ttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  32733759 ttcagattttgagagaagggggcacgtgatttttcagattttaagaagaaatatcacgtgactccttctctcaaaatctgaaaaataccattttttt 32733855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 101 - 361
Target Start/End: Complemental strand, 10087912 - 10087646
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  10087912 ggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10087813  T
Q  201 ctgattttatggtccccatgacatttagtgctg-------gnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnnga 293  Q
    ||||||||||||| | |||||||||||||||||               ||| ||||||||| | |||||||||||||||||||||              |    
T  10087812 ctgattttatggt-ctcatgacatttagtgctgatatgtttgttttttatcgattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaaaa 10087714  T
Q  294 tggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtg 361  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  10087713 tggtatttttcaaattttgagagaagggggcacgtgatttttcaaattttaagaagaaatatcacgtg 10087646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 101 - 385
Target Start/End: Complemental strand, 13177109 - 13176826
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||| |||||||||||||| ||||||| || ||||||||  ||||| |||||||||||| |||||||||||||||| ||| || |||| | ||| |||    
T  13177109 ggcttagttgcacttttcccc-ctatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttgccccttatagttgtcccccttt 13177011  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnnga-tggtat 299  Q
    ||||||||||||||||||||||||||| | |||        ||||||||||||| | ||||||||  |||||||||||              | ||||||    
T  13177010 ctgattttatggtccccatgacatttactactg-attttttatcaattaatgtgtgccacgtgtgcgattccatttttaaaaaataaaaaaaaatggtat 13176912  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaa 385  Q
    |||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||    
T  13176911 ttttcagattttgagagaagggggcatgtgatttttcagatttgaagaagaaatatcgcgtgcctccttctctcaaaatctgaaaa 13176826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 33974353 - 33974221
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  33974353 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 33974254  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||| ||||||||||||||||||    
T  33974253 ctgattttatggtctccatgacatttagtgctg 33974221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 7654602 - 7654470
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||| || |||| |||||| |||||| ||| |||    
T  7654602 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctatagttttcccccttt 7654503  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||||||||    
T  7654502 ctgattttatggtccccatgacatttagtgctg 7654470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 22755142 - 22755012
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttc 201  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| ||||||| |||||||||||||||| |||||| || ||||||| ||||    
T  22755142 gcttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctatag-ttttcccctttc 22755044  T
Q  202 tgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||| ||||||||||||||||||||||    
T  22755043 tgattttattgtccccatgacatttagtgctg 22755012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 32734047 - 32733918
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||| | ||||  || ||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctataattttctccctttctg 32733948  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    |||||||||| ||||||| |||||||||||    
T  32733947 attttatggttcccatgatatttagtgctg 32733918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 29074425 - 29074294
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||| |||| |||| |||||||||||||||||||| |||||||||| |||||||  ||||||||||||||  |||||| ||||||  || |||    
T  29074425 ggcttaattgctctttccccc-ctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgcccttt 29074327  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||| | |||||||||||||||||||    
T  29074326 ctgattttatgattcccatgacatttagtgctg 29074294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 29079189 - 29079058
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||| |||| |||| |||||||||||||||||||| |||||||||| |||||||  ||||||||||||||  |||||| ||||||  || |||    
T  29079189 ggcttaattgctctttccccc-ctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgcccttt 29079091  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||| | |||||||||||||||||||    
T  29079090 ctgattttatgattcccatgacatttagtgctg 29079058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 29106998 - 29106867
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||| |||| |||| |||||||||||||||||||| |||||||||| |||||||  ||||||||||||||  |||||| ||||||  || |||    
T  29106998 ggcttaattgctctttccccc-ctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgcccttt 29106900  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||| | |||||||||||||||||||    
T  29106899 ctgattttatgattcccatgacatttagtgctg 29106867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 2354409 - 2354540
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| |||||||| |||||||||  ||||||| | |||||||| | ||| |||  ||||||||||||||  |||||| |||||| ||| |||    
T  2354409 ggcttaattgcatttttcccc-ctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctatagttttcccccttt 2354507  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| |||||||||||||||||||    
T  2354508 ctgattttatggttcccatgacatttagtgctg 2354540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 2354864 - 2354733
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| ||||||| ||||||||||| ||||||||| |||||||||| ||| |||  |||||||| |||||| |||||| || ||||||| ||     
T  2354864 ggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccctatag-ttttccccttc 2354766  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
     |||||||||||| ||||||||||||| |||||    
T  2354765 atgattttatggttcccatgacatttaatgctg 2354733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 13176641 - 13176751
Alignment:
Q  123 ctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctgattttatggtccccatgac 222  Q
    |||||||||||||||||| | |||||| | | |||  || |||| ||||||||||| |||||| |||||| ||  |||||||||||||||||||| ||||    
T  13176641 ctatagtttgccaattgtacgattttgtatcccatgattttaaatgagcgattttgccccctatagttttcccactttctgattttatggtccccgtgac 13176740  T
Q  223 atttagtgctg 233  Q
    |||||||||||    
T  13176741 atttagtgctg 13176751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 33828990 - 33829067
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  33828990 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 33829067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 33829690 - 33829613
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  33829690 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 33829613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24737681 - 24737720
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24737681 tgtacactagatctgatggttgtgaagtgtttatgcacgg 24737720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 35119310 - 35119271
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35119310 tgtacactagatctgatggttgtgaagtgtttatgcacgg 35119271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18611264 - 18611228
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  18611264 tgtacactagatctgatggttgtgaagtgtttatgca 18611228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29157301 - 29157262
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  29157301 tgtacactagatctgatggttgtaaagtgtttatgcacgg 29157262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33346361 - 33346400
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  33346361 tgtacactagatttgatggttgtgaagtgtttatgcacgg 33346400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 403670 - 403708
Alignment:
Q  123 ctatagtttgccaattgtgcaattttgcacctcatagtt 161  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  403670 ctatagtttgccaattttgcaattttgcacctcatagtt 403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 3403717 - 3403769
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  3403717 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 3403769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 3404043 - 3403991
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  3404043 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 3403991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 13176767 - 13176803
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  13176767 atcaattaatgtgtgtcacgtgtgtaattccattttt 13176803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 397
Target Start/End: Complemental strand, 22754944 - 22754842
Alignment:
Q  294 tggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatg 393  Q
    |||||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||  |||||||| |||||||||||||||||| ||||||| |||     
T  22754944 tggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaagaatcacgtg-ctccttctctcaaaatctgaaaaatatcatt 22754846  T
Q  394 tttt 397  Q
    ||||    
T  22754845 tttt 22754842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 22684124 - 22684166
Alignment:
Q  294 tggtatttttcagattttgagataagggggcacgtgatttttc 336  Q
    |||||||||||||||||||||| |||| |||||||||| ||||    
T  22684124 tggtatttttcagattttgagagaaggaggcacgtgatatttc 22684166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 3825530 - 3825578
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||||||||||||| ||||| ||||| |||||||| ||||||||||    
T  3825530 ttaattgcacttttcccc-ctatattttgctaattgtgcgattttgcacc 3825578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 275
Target Start/End: Complemental strand, 29074278 - 29074245
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccatt 275  Q
    ||||||||||||| ||||||||||||||||||||    
T  29074278 atcaattaatgtgtgtcacgtgtgtaattccatt 29074245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 275
Target Start/End: Complemental strand, 29079042 - 29079009
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccatt 275  Q
    ||||||||||||| ||||||||||||||||||||    
T  29079042 atcaattaatgtgtgtcacgtgtgtaattccatt 29079009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 275
Target Start/End: Complemental strand, 29106851 - 29106818
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccatt 275  Q
    ||||||||||||| ||||||||||||||||||||    
T  29106851 atcaattaatgtgtgtcacgtgtgtaattccatt 29106818  T

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Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34399716 - 34399683
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttat 34  Q
    |||||||||||||||||| |||||||||||||||    
T  34399716 tgtacactagatctgatgattgtgaagtgtttat 34399683  T

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Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 7654454 - 7654418
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  7654454 atcaattaatgtgtgccacgtgtgtaattccattttt 7654418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 10039676 - 10039727
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  10039676 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacc 10039727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 10087671 - 10087723
Alignment:
Q  349 gaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||| |||||||| | |||||||||||||| | ||||||||||| ||||||||    
T  10087671 gaaaaatcacgtgcccccttctctcaaaatttgaaaaataccatttttttatt 10087723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 13579704 - 13579653
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||||||||||||| || |||| |||||| |||||||| ||||||||||    
T  13579704 ggcttaattgcacttttctcc-ctatcgtttgctaattgtgcgattttgcacc 13579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 18241854 - 18241906
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||  |||||||| ||||||||||    
T  18241854 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 18241906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 22754996 - 22754960
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  22754996 atcaattaatgtgtgccacgtgtgtaattccattttt 22754960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 33655168 - 33655117
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||| |||||| |||  ||||| |||||||||||||||||||    
T  33655168 ggcttaattgcacttgtcccct-tatcttttgctaattgtgcaattttgcacc 33655117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 33974204 - 33974168
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  33974204 atcaattaatgtgtgccacgtgtgtaattccattttt 33974168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 1e-72; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 108 - 398
Target Start/End: Original strand, 6324924 - 6325213
Alignment:
Q  108 ttgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctgattt 207  Q
    |||||||||||||| |||||||||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||| |||||| ||  ||||||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttccctctttctgattt 6325023  T
Q  208 tatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatttttcaga 307  Q
    ||||| |||||||||||||||||||||       ||||||||||||  ||| |||||||||||||||||||              ||| |||||||||||    
T  6325024 tatggcccccatgacatttagtgctggtttttttatcaattaatgtatgtcgcgtgtgtaattccatttttaaaaaaaataaaaaatgatatttttcaga 6325123  T
Q  308 ttttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    |||||||| || || ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| |||||    
T  6325124 ttttgagagaa-ggagcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctttcaaaatctgaaaaataccattttttt 6325213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 101 - 401
Target Start/End: Complemental strand, 8851636 - 8851338
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| || ||||||| |||    
T  8851636 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatag-ttttccccttt 8851538  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtat 299  Q
    |||||||||||||||||||||||||||||||| |       ||||||||||||| | |||||||||||||||| |||||              |||||||    
T  8851537 ctgattttatggtccccatgacatttagtgct-gattttttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaaaaatggtat 8851439  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttta 399  Q
    |||||||||||||| | || || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||||    
T  8851438 ttttcagattttgaaagaa-ggagcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatttgaaaaataccattttttta 8851340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 102 - 398
Target Start/End: Complemental strand, 16911321 - 16911023
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttc 201  Q
    |||||||||||||||  ||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| ||||    
T  16911321 gcttaattgcactttcgccc-ctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttc 16911223  T
Q  202 tgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccattttt--nnnnnnnnnnnnngatggta- 298  Q
    ||||||||||||| || ||||||||||||||||       ||||||||||||| | | | |||||||||||||||||                ||| ||     
T  16911222 tgattttatggtctccgtgacatttagtgctggtttttttatcaattaatgtgtgccgcatgtgtaattccattttttaaaaaataaaaaaaaatgatat 16911123  T
Q  299 tttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  16911122 tttttcatattttgagagaagggtgcacgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttt 16911023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 101 - 392
Target Start/End: Complemental strand, 7980056 - 7979769
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| || |||||||||||| |||||||| |||||||||| ||||||| |||||||||||||| | | |||| |||||||||| |||    
T  7980056 ggcttaattgcactttttcc-tctatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccgcctatagtttttccccttt 7979958  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||| |||||||| |||       ||||||||||||| | |||||||||||||| ||||||              | ||||||    
T  7979957 ctgattttatggtccccatgatatttagtgttgg--tttttatcaattaatgtgtgccacgtgtgtaattctattttttaaaaaataaaaaaaaggtatt 7979860  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||    
T  7979859 tttcagattttgagagaa-ggggcacatgatttttcagattttaagaagaaatgtcacgtgtctccttctctcaaaatatgaaaaataccat 7979769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 101 - 398
Target Start/End: Original strand, 17850978 - 17851264
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| | |||||||||||||| |||||| || ||| ||| |||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagtt-ttaacgagcgattttgccccctatagatttcccccttt 17851076  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
     |||||||||||||||||||| ||||||||||||       ||||||||||||| |||||||||||||||| ||||||              ||||||||    
T  17851077 atgattttatggtccccatgatatttagtgctggtttttttatcaattaatgtgtgtcacgtgtgtaattctattttttaaaaaataaaaaaatggtatt 17851176  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
    ||||||||||||||| |||| |||||||||||||||||||||          |||||||||||||||||||||||||||| ||||||||||| |||||    
T  17851177 tttcagattttgagagaaggaggcacgtgatttttcagattt----------tatcacgtgtctccttctctcaaaatctgaaaaataccattttttt 17851264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 101 - 401
Target Start/End: Original strand, 7664248 - 7664545
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| | |||| ||| |||    
T  7664248 ggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttcccccttt 7664347  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattcca-tttttnnnnnnnnnnnnngatggtat 299  Q
    ||||||||||||||||||||| |||||||||  |       ||||||||||||| | |||||||||||||||| |||||              |||||||    
T  7664348 ctgattttatggtccccatgatatttagtgc--gtttttttatcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaaaaatggtat 7664445  T
Q  300 ttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttta 399  Q
    |||||||||||||||| || ||  | |||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||| ||||||    
T  7664446 ttttcagattttgagagaa-ggaacgcgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatc-cgaaaataccattttttta 7664543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 26692871 - 26692742
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| ||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 26692772  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||||||||||||||||    
T  26692771 attttatggtccccatgacatttagtgctg 26692742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 101 - 278
Target Start/End: Complemental strand, 7664727 - 7664551
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||| | |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  7664727 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 7664628  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||||||||||||||||||||| |        ||||||||||||| | |||||||||||||||||||||    
T  7664627 ctgattttatggtccccatgacatttagtgc-gttttttttatcaattaatgtgtgccacgtgtgtaattccattttt 7664551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 8851151 - 8851277
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||| ||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 8851250  T
Q  204 attttatggtccccatgacatttagtg 230  Q
    |||||||||||||||||||||||||||    
T  8851251 attttatggtccccatgacatttagtg 8851277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 103 - 233
Target Start/End: Complemental strand, 6325399 - 6325269
Alignment:
Q  103 cttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttct 202  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||  |||||||||||||||| |||||| |||||| |||||||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctatagttttccccatttct 6325300  T
Q  203 gattttatggtccccatgacatttagtgctg 233  Q
    || ||||||||||| | || |||||||||||    
T  6325299 gactttatggtccctaggatatttagtgctg 6325269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 16910827 - 16910956
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||||||  | ||||||||||||||||| |||||||||| ||||||| |||||||||||||||| || ||| |||||| | | |||    
T  16910827 ggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttcctccttt 16910926  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||||||||||||||||||||    
T  16910927 ctgattttatggtccccatgacatttagtg 16910956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 104 - 233
Target Start/End: Original strand, 26692399 - 26692528
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||  ||||| | |||||||| ||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctataatttttcccctttctg 26692498  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||| |||||||| |||||    
T  26692499 attttatggtccccaagacatttattgctg 26692528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 17851456 - 17851325
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||  | | ||||||||||||||||||| ||||| |||| ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  17851456 ggcttaattgcacttttttcttttatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 17851357  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||| |||||||||||||||||||    
T  17851356 ctgattttatggt-cccatgacatttagtgctg 17851325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 19141898 - 19141771
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||||||||| |||||  |||||||||||||||||| |||||||| | |||||||  ||||||||||||||| |||||| |||||| ||| ||||||    
T  19141898 ttaattgcactttccccct--atagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttctg 19141801  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    |||||||||| |||||||||||||||||||    
T  19141800 attttatggttcccatgacatttagtgctg 19141771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 232
Target Start/End: Original strand, 5793450 - 5793578
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||||||||||||||  | ||||||||||||||||| |||||||| |  |||||| |||||||||||||||| |||||| |||||| ||  ||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctatagttttccctctttctg 5793549  T
Q  204 attttatggtccccatgacatttagtgct 232  Q
    ||||||||||||||||||||||| |||||    
T  5793550 attttatggtccccatgacattttgtgct 5793578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 7979567 - 7979697
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||| |||||||||||||| |  |||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||||| ||  |||    
T  7979567 ggctttattgcacttttccctt--atagtttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctcttt 7979664  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||| |||| ||||||||||||||||    
T  7979665 ctgattttatgatccctatgacatttagtgctg 7979697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 41790966 - 41790837
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| || ||| |||  ||||||||||||||| |||||| |||||| ||  |||    
T  41790966 ggcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctatagttttccctcttt 41790867  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
    ||||||||||||| ||||||| ||||||||    
T  41790866 ctgattttatggttcccatgatatttagtg 41790837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 37720204 - 37720307
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| || ||||||| |||    
T  37720204 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg-cccctatag-ttttccccttt 37720301  T
Q  201 ctgatt 206  Q
    ||||||    
T  37720302 ctgatt 37720307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 104 - 233
Target Start/End: Original strand, 41790494 - 41790622
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    ||||||||| |||||||| |||||||||| ||||||||| |||||||||| ||| |||  ||||||||||||||| |||||| |||||| | | ||||||    
T  41790494 ttaattgcatttttcccc-ctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 41790592  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    |||||||||| | ||||||||||| |||||    
T  41790593 attttatggttctcatgacatttaatgctg 41790622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 5380013 - 5379890
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||| | |||||  ||||| ||||||||| |||||| | |||  ||| |||    
T  5380013 ggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttacccccttt 5379914  T
Q  201 ctgattttatggtccccatgacat 224  Q
    ||||||| ||||||||| ||||||    
T  5379913 ctgatttgatggtccccctgacat 5379890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 5378661 - 5378777
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||||  ||||| ||||||||| |||||| | |||  ||  |||    
T  5378661 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccctcttt 5378760  T
Q  201 ctgattttatggtcccc 217  Q
    ||||||| |||||||||    
T  5378761 ctgatttgatggtcccc 5378777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 104 - 233
Target Start/End: Original strand, 18749729 - 18749856
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctg 203  Q
    |||||||||||||| | | || ||||||| ||||| ||  |||||||||| ||||||| |||||||  ||||||| |||||| |||||||||| ||||||    
T  18749729 ttaattgcacttttactc-ctctagtttgtcaattatgtgattttgcaccccatagttttaaacgaatgattttgccccctatagtttttccc-tttctg 18749826  T
Q  204 attttatggtccccatgacatttagtgctg 233  Q
    ||||||||| |||||| |||||||||||||    
T  18749827 attttatgggccccataacatttagtgctg 18749856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 18750178 - 18750062
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttc 201  Q
    |||||||||||||| ||||| |||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| ||||              ||||    
T  18750178 gcttaattgcacttctcccc-ctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccc--------------tttc 18750094  T
Q  202 tgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||||||||||||||||||    
T  18750093 tgattttatggtccccatgacatttagtgctg 18750062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 19141446 - 19141547
Alignment:
Q  103 cttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttct 202  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||| |||  |||||| |||||| ||| ||| |    
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcgaatttaccccctatagttttccccctttat 19141544  T
Q  203 gat 205  Q
    |||    
T  19141545 gat 19141547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 2638820 - 2638897
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||| ||||| || ||||  |||||||||||||| |||||||||| |||| || ||||||||||||||||    
T  2638820 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttg 2638897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 2639536 - 2639459
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  2639536 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 2639459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 26841587 - 26841664
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  26841587 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 26841664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 38490894 - 38490818
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||| | || ||||||||| |||||||||| |||||||| ||||| ||| ||||||||||||||||    
T  38490894 ggcttaattgcactttcctcc-ctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttg 38490818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 18298101 - 18298140
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18298101 tgtacactagatctgatggttgtgaagtgtttatgcacgg 18298140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 20709849 - 20709810
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20709849 tgtacactagatctgatggttgtgaagtgtttatgcacgg 20709810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14551309 - 14551347
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacg 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14551309 tgtacactagatctgatggttgtgaagtgtttatgcacg 14551347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 26842292 - 26842215
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    ||||||| |||||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 26842215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 401
Target Start/End: Complemental strand, 17851212 - 17851160
Alignment:
Q  349 gaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||| |||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  17851212 gaaaaatcacgtgcctccttctctcaaaatctgaaaaataccatttttttatt 17851160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 18296077 - 18296153
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    ||||||||| ||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 18296153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 20347518 - 20347466
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  20347518 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 20347466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 30190923 - 30190975
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  30190923 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 30190975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 25192967 - 25192928
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  25192967 tgtacactagatctaatggttgtgaagtgtttatgcacgg 25192928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 7591204 - 7591278
Alignment:
Q  104 ttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    ||||||| ||||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 7591278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 401
Target Start/End: Original strand, 26692636 - 26692682
Alignment:
Q  355 tcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||||||||||||||||||||||||| |||||||| || ||||||||    
T  26692636 tcacgtgtctccttctctcaaaatctgaaaaatactatttttttatt 26692682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4281778 - 4281811
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttat 34  Q
    ||||||||||||||||||||||||||||||||||    
T  4281778 tgtacactagatctgatggttgtgaagtgtttat 4281811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 398
Target Start/End: Original strand, 8851296 - 8851451
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatttttcagattttgagataagggggcacgtgatttttcagatt 341  Q
    ||||||||||||| | |||||||||||||||||||||              ||||||||||||| ||||||||| |||| |||||||||| ||||   ||    
T  8851296 atcaattaatgtgtgccacgtgtgtaattccattttttaaaaaataaaaaaatggtatttttcaaattttgagagaaggaggcacgtgatatttcttctt 8851395  T
Q  342 ttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgttttt 398  Q
      ||   |||| |||||||| |||||||| ||||||||| ||||||||||| |||||    
T  8851396 aaaatctgaaaaatcacgtg-ctccttctttcaaaatctgaaaaataccattttttt 8851451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4579808 - 4579844
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    ||||||||||||||||||||||| |||||||||||||    
T  4579808 tgtacactagatctgatggttgtaaagtgtttatgca 4579844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 6171510 - 6171458
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||||||||||||  ||||||||||    
T  6171510 ggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacc 6171458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 6325253 - 6325217
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  6325253 atcaattaatgtgtgtcacgtgtgtaattccattttt 6325217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 11883623 - 11883675
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  11883623 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 11883675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 11883980 - 11883928
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  11883980 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 11883928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 18296747 - 18296695
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||||||||||||| || ||||  |||||||||||||| ||||||||||    
T  18296747 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 18296695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 18750046 - 18750010
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| |||||||||||||||||||||||    
T  18750046 atcaattaatgtgtgtcacgtgtgtaattccattttt 18750010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 24832331 - 24832383
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  24832331 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 24832383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 336
Target Start/End: Original strand, 16911029 - 16911072
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttc 336  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||    
T  16911029 atggtatttttcagattttgagagaaggaggcacgtgatatttc 16911072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 17851310 - 17851274
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  17851310 atcaattaatgtgtgccacgtgtgtaattccattttt 17851274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 19141583 - 19141619
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| | |||||||||||||||||||||    
T  19141583 atcaattaatgtgtgccacgtgtgtaattccattttt 19141619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 20347163 - 20347215
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||| ||||||||||||||||  ||||  |||||||| ||||||||||    
T  20347163 ggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacc 20347215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25995362 - 25995326
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgca 37  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  25995362 tgtacactaaatctgatggttgtgaagtatttatgca 25995326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 26692726 - 26692690
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattttt 278  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  26692726 atcaattaatgtgtgtcacgtgtgtaatttcattttt 26692690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 29230282 - 29230334
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||| ||||||  |||| ||||||||  ||||||||||    
T  29230282 ggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 113; Significance: 4e-57; HSPs: 4)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 101 - 397
Target Start/End: Complemental strand, 816 - 525
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||| |||||||||||||||||||| |||||||||| |||| || |||||||||||||||| |||||| || ||||| |||||    
T  816 ggcttaattgcactttttccc-ctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttg-cccctatag-ttttctcattt 720  T
Q  201 ctgattttatggtccccatgacatttagtgctggnnnnnnnatcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnngatggtatt 300  Q
    ||||||||||||||||||||||||||| |||||        ||  ||||||||| | ||||||||| |||| ||||||              || |||||    
T  719 ctgattttatggtccccatgacatttaatgctgatttttttatgcattaatgtgtgccacgtgtgtgattctattttttaaaaaataaaaa-atagtatt 621  T
Q  301 tttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttt 397  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  620 tttcagattttgagataa-ggagcacgtgatttttcatattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccatttttt 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 330 - 462
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||| | ||||||| |||||||||||||||| |||||| |||||| ||| |||    
T  330 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 429  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||||||||||| |||||||||||||||    
T  430 ctgattttatggtccccgtgacatttagtgctg 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 530 - 625
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaatac 389  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||   ||  || | |||| |||||||| |||||| ||||||||||| ||||||||    
T  530 atggtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatatgaaaaatcacgtg-ctccttatctcaaaatctgaaaaatac 625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 276
Target Start/End: Original strand, 478 - 512
Alignment:
Q  242 atcaattaatgtgagtcacgtgtgtaattccattt 276  Q
    ||||||||||||| |||||||||||||||||||||    
T  478 atcaattaatgtgtgtcacgtgtgtaattccattt 512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 134 - 401
Target Start/End: Original strand, 38284 - 38559
Alignment:
Q  134 caattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccatttctgattttatggtccccatgacatttagtgctg 233  Q
    ||||||||| |||||||| | ||||||| |||| ||||||||||| |||||| |||||| ||  ||||||||||||||||||||||||||||||||||||    
T  38284 caattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctatagttttccctctttctgattttatggtccccatgacatttagtgctg 38383  T
Q  234 gnnnnnnn-------atcaattaatgtgagtcacgtgtgtaattccatttttnnnnnnnnnnnnnga-tggtatttttcagattttgagataagggggca 325  Q
                   ||||||||||||| | |||||||||||||| ||||||              | || ||||||||||||||||||| |||||  ||    
T  38384 atatgtctgttttttatcaattaatgtgtgccacgtgtgtaattcaatttttattttttttaaaaaaatgatatttttcagattttgagagaagggaaca 38483  T
Q  326 cgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtttttatt 401  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| || ||||||||    
T  38484 cgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatactatttttttatt 38559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 38749 - 38617
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    ||||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||  ||||||| |||||||| |||||| |||||| ||| |||    
T  38749 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctatagttttcccccttt 38650  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||| ||| ||||||||||||||||||    
T  38649 ctgattttatagtctccatgacatttagtgctg 38617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 399
Target Start/End: Complemental strand, 38547 - 38444
Alignment:
Q  296 gtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtt 395  Q
    |||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| |||||||||  |||||||||||||||| ||||||| ||| ||    
T  38547 gtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcacgtgttcccttctctcaaaatctgaaaaatatcatttt 38448  T
Q  396 ttta 399  Q
    ||||    
T  38447 ttta 38444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 82; Significance: 1e-38; HSPs: 4)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 19621 - 19753
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||| ||||||||  ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| ||||| |||| |||    
T  19621 ggcttaattgcaattttcccca-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttctccccttt 19719  T
Q  201 ctgattttatggtccccatgacatttagtgctgg 234  Q
    || |||||||||||||||||||||||| ||||||    
T  19720 ctaattttatggtccccatgacatttaatgctgg 19753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 19798 - 19902
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||| | ||||||||| |||| | || ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||    
T  19798 atggtattttttaaattttgagagaaggag-catgtgatttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatactat 19896  T
Q  393 gttttt 398  Q
     |||||    
T  19897 tttttt 19902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 20097 - 19969
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||||||||  ||||||||| ||||||||| ||||||| || ||||||| |||||   |||||||| |||||| || ||| ||| |||    
T  20097 ggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaactgacgattttgccccctatag-tttcccccttt 19999  T
Q  201 ctgattttatggtccccatgacatttagtg 230  Q
     ||||||||||||||| |||||||||||||    
T  19998 ttgattttatggtccctatgacatttagtg 19969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 392
Target Start/End: Complemental strand, 19893 - 19798
Alignment:
Q  296 gtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    |||||||||||||||||||| |||| |||||||||| ||||   ||  ||   |||| ||||| || |||||||||||||||| |||||||||||||    
T  19893 gtatttttcagattttgagagaaggaggcacgtgatatttcttcttaaaatctgaaaaatcacatg-ctccttctctcaaaatttaaaaaataccat 19798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 79; Significance: 8e-37; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 9905 - 10035
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctc-atagttctaaacgagcgattttgtcccctaaagtttttcccatt 199  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||| |||| | |||||| |||||||||||||||| |||||| |||||| ||| ||    
T  9905 ggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctatagttttccccctt 10004  T
Q  200 tctgattttatggtccccatgacatttagtg 230  Q
    |||||||||||||||||||| ||||||||||    
T  10005 tctgattttatggtccccataacatttagtg 10035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 10204 - 10100
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  10204 atggtatttttcagattttgagagaaggag-cacgtgatttttcagatgttaagaagaaatatcacgtgcctccttctctcaaaatctaaaaaatacaat 10106  T
Q  393 gttttt 398  Q
     |||||    
T  10105 tttttt 10100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 10332 - 10273
Alignment:
Q  171 cgattttgtcccctaaagtttttcccatttctgattttatggtccccatgacatttagtg 230  Q
    ||||||||  ||||| |||||| ||| |||||||||||||||||||||| ||||||||||    
T  10332 cgattttgcaccctatagttttccccctttctgattttatggtccccataacatttagtg 10273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 397
Target Start/End: Original strand, 10109 - 10209
Alignment:
Q  296 gtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccatgtt 395  Q
    |||||||| ||||||||||| |||| |||||||||| ||||   ||   |   |||| |||||||| |||||||||||||||||| ||||||||||| ||    
T  10109 gtattttttagattttgagagaaggaggcacgtgatatttcttcttaacatctgaaaaatcacgtg-ctccttctctcaaaatctgaaaaataccatttt 10207  T
Q  396 tt 397  Q
    ||    
T  10208 tt 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 10371 - 10321
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    |||||||| |||||||||||||  |||||||||||||||| | ||||||||||    
T  10371 ggcttaatagcacttttcccct--atagtttgccaattgtccgattttgcacc 10321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 78; Significance: 3e-36; HSPs: 3)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 50075 - 50204
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttgtcccctaaagtttttcccattt 200  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||||||||| ||||||| |||||||||||||||| |||||  || ||||||| |||    
T  50075 ggcttaattgcactttccccct--atagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctgtag-ttttccccttt 50171  T
Q  201 ctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||| ||||||||||||||||    
T  50172 ctgattttatggtccctatgacatttagtgctg 50204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 50369 - 50265
Alignment:
Q  293 atggtatttttcagattttgagataagggggcacgtgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctaaaaaataccat 392  Q
    ||||||||||||||||||||||| |||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  50369 atggtatttttcagattttgagagaaggag-cacatgatttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctgaaaaataccat 50271  T
Q  393 gttttt 398  Q
     |||||    
T  50270 tttttt 50265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 50560 - 50428
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctc-atagttctaaacgagcgattttgtcccctaaagtttttcccatt 199  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||||| ||||||||| |||||| |||||| |||||  ||| ||    
T  50560 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctt 50462  T
Q  200 tctgattttatggtccccatgacatttagtgctg 233  Q
    |||||||||||||||||||||||||||| |||||    
T  50461 tctgattttatggtccccatgacatttaatgctg 50428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 7092 - 7053
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7092 tgtacactagatctgatggttgtgaagtgtttatgcacgg 7053  T

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Target: scaffold0097 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13688 - 13649
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13688 tgtacactagatctgatggttgtgaagtgtttatgcacgg 13649  T

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Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 6152 - 6229
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||||||||| |||||||  ||||| |||||||| ||||| |||| |||| || |||| |||||||||||    
T  6152 ggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccatatttttaaatgagcgattttg 6229  T

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Target: scaffold0328; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 6849 - 6772
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacctcatagttctaaacgagcgattttg 178  Q
    |||||||||||| ||||| || ||||  |||||||||||||| |||||||||| |||  || ||||||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 6772  T

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Target: scaffold0544 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 10668 - 10704
Alignment:
Q  4 acactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||||||||||||||||||||||||||    
T  10668 acactagatctgatggttgtgaagtgtttatgcacgg 10704  T

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Target: scaffold0238 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 25222 - 25261
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  25222 tgtacactaaatctgatggttgtgaagtgtttatgcacgg 25261  T

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Target: scaffold0802 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 1474 - 1422
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||| ||| ||||  |||||||||||||| ||||||||||    
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcacc 1422  T

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Target: scaffold0319 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 6394 - 6446
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  6394 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 6446  T

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Target: scaffold0319; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 6750 - 6699
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  6750 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacc 6699  T

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Target: scaffold0192 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 25423 - 25371
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  25423 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 25371  T

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Target: scaffold0110 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 45860 - 45809
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  45860 ggcttaattgcacttttcccc-ctatcttttgccaattgtgcgattttgcacc 45809  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 17209 - 17158
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||||||    
T  17209 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcaattttgcacc 17158  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 438930 - 438982
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||||||||||||| ||||  ||||| |||||||| ||||||||||    
T  438930 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 438982  T

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Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 183716 - 183670
Alignment:
Q  101 ggcttaattgcacttttcccctctatagtttgccaattgtgcaattt 147  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| ||||    
T  183716 ggcttaattgcacttttcccccctatattttgctaattgtgcgattt 183670  T

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Target: scaffold0194 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27682 - 27643
Alignment:
Q  1 tgtacactagatctgatggttgtgaagtgtttatgcacgg 40  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  27682 tgtacactagatcttatagttgtgaagtgtttatgcacgg 27643  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 72967 - 73018
Alignment:
Q  102 gcttaattgcacttttcccctctatagtttgccaattgtgcaattttgcacc 153  Q
    ||||||||||| ||||||||| |||  ||||| |||||||||||||||||||    
T  72967 gcttaattgcatttttcccctttatcttttgctaattgtgcaattttgcacc 73018  T

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