View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3044_high_6 (Length: 402)

Name: NF3044_high_6
Description: NF3044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3044_high_6
NF3044_high_6
[»] chr2 (53 HSPs)
chr2 (166-394)||(5582912-5583130)
chr2 (1-156)||(27665052-27665209)
chr2 (1-156)||(16126567-16126724)
chr2 (1-156)||(19228438-19228595)
chr2 (1-155)||(14377438-14377594)
chr2 (1-156)||(12016679-12016836)
chr2 (4-117)||(4821330-4821443)
chr2 (1-156)||(16919162-16919319)
chr2 (4-156)||(22705467-22705621)
chr2 (8-156)||(13351226-13351377)
chr2 (1-157)||(16123290-16123448)
chr2 (1-140)||(8770894-8771032)
chr2 (4-137)||(2060053-2060187)
chr2 (3-156)||(15411632-15411788)
chr2 (19-156)||(39904074-39904213)
chr2 (3-156)||(26229864-26230018)
chr2 (284-379)||(5573652-5573747)
chr2 (4-118)||(15231883-15231998)
chr2 (1-140)||(41492141-41492279)
chr2 (1-133)||(9747354-9747487)
chr2 (38-156)||(10690795-10690915)
chr2 (10-118)||(37471757-37471866)
chr2 (1-143)||(45062225-45062368)
chr2 (1-112)||(9450315-9450427)
chr2 (1-156)||(12919358-12919517)
chr2 (1-112)||(20566025-20566137)
chr2 (1-144)||(7757794-7757937)
chr2 (71-156)||(12438727-12438813)
chr2 (1-156)||(5583566-5583723)
chr2 (335-394)||(5593404-5593463)
chr2 (324-379)||(12051652-12051707)
chr2 (312-379)||(12064524-12064591)
chr2 (1-156)||(23932577-23932735)
chr2 (55-144)||(22162139-22162228)
chr2 (1-79)||(29157837-29157915)
chr2 (1-117)||(24729585-24729702)
chr2 (3-99)||(35729188-35729285)
chr2 (84-144)||(25998094-25998154)
chr2 (312-379)||(12059072-12059139)
chr2 (84-156)||(43388858-43388932)
chr2 (3-88)||(43941864-43941949)
chr2 (3-79)||(3286587-3286663)
chr2 (1-37)||(6109523-6109559)
chr2 (5-144)||(34213961-34214103)
chr2 (1-108)||(38248428-38248536)
chr2 (1-36)||(8065258-8065293)
chr2 (1-36)||(26003354-26003389)
chr2 (293-378)||(5587184-5587269)
chr2 (1-34)||(5853471-5853504)
chr2 (1-34)||(16493540-16493573)
chr2 (82-143)||(27865905-27865965)
chr2 (3-79)||(3951342-3951418)
chr2 (3-79)||(8847879-8847955)
[»] chr7 (51 HSPs)
chr7 (1-156)||(19889353-19889510)
chr7 (1-156)||(5909290-5909447)
chr7 (1-156)||(39757118-39757275)
chr7 (1-156)||(9331974-9332131)
chr7 (1-144)||(23982763-23982907)
chr7 (1-156)||(7170015-7170172)
chr7 (1-156)||(3561886-3562043)
chr7 (1-156)||(36548468-36548625)
chr7 (1-144)||(12085939-12086082)
chr7 (7-133)||(384444-384570)
chr7 (27-156)||(47120228-47120359)
chr7 (1-121)||(18102238-18102359)
chr7 (1-88)||(41331464-41331551)
chr7 (1-144)||(24462963-24463106)
chr7 (1-144)||(25709407-25709551)
chr7 (1-67)||(24250602-24250668)
chr7 (71-156)||(24250326-24250413)
chr7 (1-156)||(47457469-47457627)
chr7 (16-154)||(39869137-39869276)
chr7 (1-101)||(5833424-5833525)
chr7 (1-112)||(7040260-7040371)
chr7 (1-69)||(22334029-22334097)
chr7 (1-156)||(33343001-33343158)
chr7 (1-69)||(8595000-8595067)
chr7 (40-156)||(19868126-19868245)
chr7 (1-144)||(46290037-46290180)
chr7 (1-156)||(42750301-42750453)
chr7 (1-99)||(8170593-8170691)
chr7 (1-156)||(34270278-34270431)
chr7 (1-121)||(7899494-7899615)
chr7 (1-144)||(8091320-8091464)
chr7 (1-61)||(4969883-4969943)
chr7 (1-61)||(26300681-26300741)
chr7 (9-119)||(12624688-12624798)
chr7 (84-156)||(12650833-12650907)
chr7 (1-144)||(3530122-3530265)
chr7 (1-61)||(26037203-26037263)
chr7 (1-61)||(29398142-29398202)
chr7 (3-79)||(38798080-38798156)
chr7 (3-79)||(38798218-38798294)
chr7 (3-79)||(42593404-42593480)
chr7 (1-61)||(45501569-45501629)
chr7 (3-79)||(45645459-45645535)
chr7 (1-36)||(820549-820584)
chr7 (1-156)||(32117827-32117984)
chr7 (1-48)||(33072104-33072151)
chr7 (1-59)||(26050469-26050527)
chr7 (1-59)||(26059828-26059886)
chr7 (3-88)||(28061333-28061418)
chr7 (66-117)||(24699188-24699240)
chr7 (10-109)||(47707901-47708001)
[»] chr3 (45 HSPs)
chr3 (1-156)||(11610927-11611084)
chr3 (1-156)||(20938069-20938227)
chr3 (1-144)||(13495320-13495464)
chr3 (1-156)||(3863342-3863499)
chr3 (5-143)||(16875037-16875175)
chr3 (13-144)||(50364217-50364348)
chr3 (1-117)||(29686374-29686490)
chr3 (1-144)||(40497074-40497217)
chr3 (1-144)||(38389473-38389617)
chr3 (31-156)||(54621256-54621383)
chr3 (1-117)||(24978700-24978816)
chr3 (1-144)||(32553393-32553536)
chr3 (58-156)||(51339249-51339349)
chr3 (1-57)||(11611090-11611146)
chr3 (1-156)||(46492351-46492509)
chr3 (1-83)||(23523034-23523116)
chr3 (1-118)||(36426417-36426535)
chr3 (1-69)||(41151735-41151803)
chr3 (1-156)||(2571281-2571438)
chr3 (1-156)||(51618062-51618217)
chr3 (12-134)||(38786343-38786464)
chr3 (1-143)||(37055374-37055517)
chr3 (1-156)||(10307779-10307936)
chr3 (1-156)||(23638057-23638215)
chr3 (1-111)||(23803054-23803165)
chr3 (1-78)||(39364878-39364955)
chr3 (10-49)||(36812380-36812419)
chr3 (84-156)||(46845532-46845606)
chr3 (1-121)||(1569198-1569319)
chr3 (1-61)||(8165756-8165816)
chr3 (3-79)||(29932362-29932438)
chr3 (3-79)||(29981516-29981592)
chr3 (1-112)||(35414817-35414929)
chr3 (1-57)||(50204517-50204573)
chr3 (84-156)||(24569329-24569403)
chr3 (80-139)||(30214098-30214156)
chr3 (1-144)||(31318665-31318811)
chr3 (84-156)||(37444159-37444232)
chr3 (1-36)||(40930186-40930221)
chr3 (3-49)||(49396502-49396548)
chr3 (1-34)||(33474481-33474514)
chr3 (4-61)||(51401550-51401607)
chr3 (31-118)||(23320122-23320210)
chr3 (55-102)||(26486439-26486487)
chr3 (1-61)||(42180162-42180222)
[»] chr1 (50 HSPs)
chr1 (1-156)||(39150335-39150492)
chr1 (1-156)||(17919466-17919623)
chr1 (1-156)||(313762-313919)
chr1 (1-117)||(6569993-6570109)
chr1 (4-133)||(39930812-39930941)
chr1 (1-121)||(30288872-30288992)
chr1 (1-156)||(6754484-6754641)
chr1 (1-156)||(44918037-44918194)
chr1 (1-144)||(30363003-30363147)
chr1 (1-156)||(41624842-41624999)
chr1 (5-156)||(8062217-8062370)
chr1 (1-144)||(30171905-30172049)
chr1 (1-144)||(30187446-30187590)
chr1 (12-121)||(52833491-52833600)
chr1 (25-156)||(32716195-32716328)
chr1 (1-144)||(34801994-34802137)
chr1 (1-144)||(36490805-36490949)
chr1 (1-78)||(10896446-10896523)
chr1 (15-146)||(21854139-21854271)
chr1 (1-144)||(22167361-22167505)
chr1 (12-117)||(31100952-31101058)
chr1 (10-75)||(44007547-44007612)
chr1 (1-112)||(6307561-6307672)
chr1 (1-117)||(9516634-9516751)
chr1 (1-154)||(23576422-23576577)
chr1 (4-88)||(3096292-3096376)
chr1 (1-144)||(23591724-23591868)
chr1 (1-156)||(1502728-1502885)
chr1 (1-88)||(12947562-12947649)
chr1 (18-88)||(21391924-21391994)
chr1 (92-156)||(51382384-51382450)
chr1 (1-117)||(13241810-13241927)
chr1 (1-62)||(25465267-25465328)
chr1 (1-117)||(35438768-35438885)
chr1 (7-95)||(5057077-5057166)
chr1 (1-61)||(6180296-6180356)
chr1 (3-79)||(42589264-42589340)
chr1 (3-79)||(44013017-44013093)
chr1 (1-36)||(5875223-5875258)
chr1 (1-88)||(33673743-33673830)
chr1 (1-36)||(35512860-35512895)
chr1 (1-118)||(32543058-32543176)
chr1 (13-102)||(52337834-52337924)
chr1 (65-133)||(6520749-6520817)
chr1 (3-79)||(4249298-4249374)
chr1 (3-79)||(4249622-4249698)
chr1 (3-79)||(4249946-4250022)
chr1 (3-79)||(9661988-9662064)
chr1 (1-61)||(13321986-13322046)
chr1 (25-144)||(39627603-39627723)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-156)||(52787-52944)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-156)||(145690-145847)
[»] chr8 (58 HSPs)
chr8 (1-156)||(10129116-10129273)
chr8 (1-156)||(7140467-7140624)
chr8 (1-156)||(13327949-13328106)
chr8 (19-156)||(9743874-9744013)
chr8 (1-156)||(35678283-35678440)
chr8 (1-156)||(39701811-39701968)
chr8 (1-130)||(18567424-18567553)
chr8 (1-138)||(39024865-39025002)
chr8 (7-156)||(40210835-40210986)
chr8 (11-144)||(8140594-8140727)
chr8 (1-156)||(26682080-26682238)
chr8 (1-156)||(14816134-14816291)
chr8 (1-156)||(14829449-14829606)
chr8 (1-156)||(19343844-19344002)
chr8 (1-156)||(9801681-9801838)
chr8 (20-156)||(38527833-38527975)
chr8 (1-144)||(4080402-4080545)
chr8 (1-144)||(4084551-4084694)
chr8 (1-144)||(4102858-4103001)
chr8 (9-89)||(45519578-45519658)
chr8 (1-144)||(8284576-8284721)
chr8 (1-117)||(1203655-1203771)
chr8 (1-143)||(44091346-44091488)
chr8 (1-144)||(31812139-31812283)
chr8 (1-131)||(26834600-26834731)
chr8 (1-100)||(14961671-14961771)
chr8 (1-156)||(2161400-2161557)
chr8 (1-144)||(12189596-12189740)
chr8 (1-144)||(12434024-12434168)
chr8 (1-118)||(7393253-7393370)
chr8 (10-75)||(31451420-31451485)
chr8 (1-156)||(3306063-3306220)
chr8 (1-144)||(12132009-12132153)
chr8 (1-144)||(20514659-20514803)
chr8 (1-143)||(6818044-6818187)
chr8 (40-144)||(34249703-34249809)
chr8 (1-61)||(28014866-28014926)
chr8 (1-144)||(43717560-43717704)
chr8 (1-60)||(26363998-26364057)
chr8 (1-68)||(29642706-29642773)
chr8 (1-48)||(36967078-36967125)
chr8 (1-52)||(45518071-45518122)
chr8 (1-79)||(15198908-15198986)
chr8 (12-82)||(35740948-35741018)
chr8 (4-117)||(38047949-38048062)
chr8 (12-57)||(34405085-34405130)
chr8 (3-79)||(10543639-10543715)
chr8 (1-41)||(13496717-13496757)
chr8 (1-61)||(27874689-27874749)
chr8 (63-156)||(39703466-39703561)
chr8 (71-143)||(45516316-45516387)
chr8 (1-36)||(22838360-22838395)
chr8 (1-36)||(38212952-38212987)
chr8 (8-61)||(297205-297258)
chr8 (86-156)||(35745982-35746054)
chr8 (1-34)||(40225995-40226028)
chr8 (1-61)||(9580117-9580177)
chr8 (3-79)||(16586732-16586808)
[»] chr5 (32 HSPs)
chr5 (1-156)||(2795536-2795693)
chr5 (1-143)||(4047440-4047582)
chr5 (15-144)||(9184234-9184363)
chr5 (11-156)||(30328345-30328492)
chr5 (1-156)||(8103588-8103745)
chr5 (4-156)||(12642004-12642158)
chr5 (6-144)||(28629905-28630043)
chr5 (1-156)||(11636744-11636901)
chr5 (1-144)||(34578038-34578181)
chr5 (1-121)||(41350252-41350372)
chr5 (1-156)||(11375972-11376130)
chr5 (1-156)||(15190885-15191043)
chr5 (1-118)||(31365958-31366075)
chr5 (1-133)||(16174630-16174762)
chr5 (1-97)||(14466502-14466598)
chr5 (15-146)||(24329657-24329789)
chr5 (1-156)||(30839794-30839951)
chr5 (1-156)||(36597592-36597749)
chr5 (1-52)||(30893748-30893799)
chr5 (1-78)||(32019992-32020069)
chr5 (66-144)||(5958196-5958275)
chr5 (1-143)||(6863584-6863726)
chr5 (70-143)||(29538755-29538828)
chr5 (1-117)||(31567499-31567616)
chr5 (1-61)||(3398330-3398390)
chr5 (1-116)||(15240958-15241074)
chr5 (14-144)||(10664986-10665116)
chr5 (3-79)||(12332429-12332505)
chr5 (3-79)||(31613159-31613235)
chr5 (3-79)||(31705021-31705097)
chr5 (1-77)||(35151313-35151389)
chr5 (3-79)||(40454153-40454229)
[»] chr4 (51 HSPs)
chr4 (1-155)||(7349702-7349858)
chr4 (1-156)||(29190824-29190981)
chr4 (1-139)||(41415565-41415703)
chr4 (1-154)||(10813502-10813658)
chr4 (1-156)||(23553582-23553740)
chr4 (1-154)||(35999955-36000103)
chr4 (1-144)||(47326900-47327044)
chr4 (1-144)||(47341696-47341840)
chr4 (1-144)||(16667392-16667536)
chr4 (1-101)||(23051390-23051490)
chr4 (5-143)||(53961350-53961488)
chr4 (1-130)||(4329635-4329764)
chr4 (1-138)||(48910810-48910947)
chr4 (1-144)||(54495645-54495789)
chr4 (4-133)||(10389279-10389408)
chr4 (1-131)||(27362430-27362561)
chr4 (5-144)||(8736823-8736962)
chr4 (1-69)||(49228756-49228824)
chr4 (5-156)||(2096883-2097037)
chr4 (1-144)||(17409850-17409994)
chr4 (1-140)||(34941308-34941448)
chr4 (1-112)||(51691399-51691511)
chr4 (1-156)||(49181084-49181242)
chr4 (28-121)||(39539513-39539607)
chr4 (1-155)||(39876844-39877000)
chr4 (1-144)||(25843317-25843464)
chr4 (71-156)||(49228369-49228456)
chr4 (1-156)||(9759150-9759307)
chr4 (1-156)||(50352315-50352472)
chr4 (1-61)||(18882275-18882335)
chr4 (4-135)||(23438191-23438322)
chr4 (1-61)||(24684947-24685007)
chr4 (19-134)||(39216057-39216173)
chr4 (1-111)||(52391357-52391468)
chr4 (1-118)||(36971326-36971444)
chr4 (4-61)||(19450911-19450968)
chr4 (1-116)||(51070406-51070520)
chr4 (3-79)||(32459422-32459498)
chr4 (4-156)||(40049571-40049725)
chr4 (3-79)||(49250345-49250421)
chr4 (1-79)||(42479900-42479978)
chr4 (84-134)||(46803574-46803624)
chr4 (1-34)||(4779444-4779477)
chr4 (51-143)||(13009813-13009906)
chr4 (84-121)||(16069299-16069336)
chr4 (4-61)||(19468304-19468361)
chr4 (84-121)||(27298940-27298977)
chr4 (1-53)||(40682550-40682601)
chr4 (3-79)||(41887579-41887655)
chr4 (84-144)||(49332359-49332419)
chr4 (71-103)||(55517469-55517501)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-156)||(13098-13255)
[»] chr6 (34 HSPs)
chr6 (1-144)||(31069590-31069733)
chr6 (25-156)||(5362925-5363058)
chr6 (1-144)||(2830689-2830832)
chr6 (1-144)||(31169771-31169915)
chr6 (1-144)||(10887055-10887199)
chr6 (24-144)||(22974604-22974724)
chr6 (24-144)||(23813677-23813797)
chr6 (3-133)||(1017788-1017919)
chr6 (1-107)||(17596404-17596511)
chr6 (1-117)||(31568163-31568279)
chr6 (1-144)||(6016882-6017026)
chr6 (1-144)||(18332696-18332840)
chr6 (1-62)||(3853052-3853113)
chr6 (1-156)||(8977474-8977632)
chr6 (1-156)||(14228134-14228291)
chr6 (1-156)||(28943777-28943934)
chr6 (4-79)||(31503834-31503909)
chr6 (1-117)||(17141328-17141445)
chr6 (82-156)||(26602520-26602596)
chr6 (1-156)||(29863310-29863468)
chr6 (71-144)||(3850578-3850651)
chr6 (1-61)||(34692464-34692524)
chr6 (1-156)||(17552595-17552752)
chr6 (1-99)||(23936384-23936483)
chr6 (19-52)||(26602478-26602511)
chr6 (1-144)||(30591171-30591315)
chr6 (4-156)||(33017737-33017891)
chr6 (3-79)||(34733711-34733787)
chr6 (1-36)||(20979107-20979142)
chr6 (40-110)||(34300422-34300493)
chr6 (1-39)||(32614952-32614990)
chr6 (36-69)||(32615281-32615314)
chr6 (1-61)||(3261188-3261248)
chr6 (73-117)||(32615540-32615584)
[»] scaffold0727 (1 HSPs)
scaffold0727 (1-156)||(5703-5861)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-144)||(3421-3565)
[»] scaffold0111 (1 HSPs)
scaffold0111 (1-144)||(37122-37266)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-121)||(182093-182212)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-143)||(8422-8564)
[»] scaffold0009 (2 HSPs)
scaffold0009 (4-140)||(191326-191461)
scaffold0009 (1-153)||(43479-43634)
[»] scaffold0073 (1 HSPs)
scaffold0073 (1-112)||(16543-16654)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-144)||(94026-94170)
[»] scaffold0192 (1 HSPs)
scaffold0192 (4-63)||(13574-13633)
[»] scaffold0149 (1 HSPs)
scaffold0149 (4-118)||(22516-22631)
[»] scaffold0503 (1 HSPs)
scaffold0503 (1-118)||(9095-9213)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-36)||(1451-1486)


Alignment Details
Target: chr2 (Bit Score: 177; Significance: 3e-95; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 166 - 394
Target Start/End: Complemental strand, 5583130 - 5582912
Alignment:
Q  166 ttgaagaaattagcttttatagttttatagcattagtatatatatatgtttagttaataatgtaacttgccaaaaacccatctttcttaaactcaaactc 265  Q
    |||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5583130 ttgaagaaattagcttttatagttttatagcattagtatatat----gtttagttaataatgtaacttgccaaaaacccatctttcttaaactcaaactc 5583035  T
Q  266 aaactcagcatcaatatcttgttcttggttggttccttaattattatctggatttattagcttcattagattttcttcttagagatggattctataataa 365  Q
    |      ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5583034 a------gcatcgatatcttgttcttggttggttccttaattattatctggatttattagcttcattagattttcttcttagagatggattctataataa 5582941  T
Q  366 agacatggttggtgttccctattcatctc 394  Q
    |||||||||||||||| ||||||| ||||    
T  5582940 agacatggttggtgtttcctattcttctc 5582912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 27665052 - 27665209
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  27665052 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaataaataattg 27665151  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||||||| |||  |||||||||||||||||||  ||||||||||||||    
T  27665152 ttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcaca 27665209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16126567 - 16126724
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  16126567 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagcttttaatcaataattg 16126666  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||||||||||||  |||||||||| ||||||||  ||||||||||||||    
T  16126667 ttggttttcaatgaaaaattactacttttagttaccttaacatgtgcaatattgcaca 16126724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 19228595 - 19228438
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| ||||||||    
T  19228595 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaataattg 19228496  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  19228495 ttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 19228438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 14377594 - 14377438
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |||||| |||||||||    
T  14377594 atcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaacttttaacaaataattg 14377495  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcac 155  Q
    |||||||||||| |||| |||  |||||||||||||||||||  |||||||||||||    
T  14377494 ttggttttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcac 14377438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 12016836 - 12016679
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  12016836 atcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattg 12016737  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||| |||| |||  |||||||||| ||||||||  ||||||||||||||    
T  12016736 ttggttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcaca 12016679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 4821443 - 4821330
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  4821443 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgatttgaaacttgtgttttttatattaaatatgtagcttttaataaataattgttg 4821344  T
Q  104 gttttcaatgaaaa 117  Q
    ||||||||||||||    
T  4821343 gttttcaatgaaaa 4821330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16919162 - 16919319
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  ||||||| ||||||||    
T  16919162 atcatgtgcaaatttgcacatattaacaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaacttttaatcaataattg 16919261  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||  |||| |||  |||||||||| ||||||||  ||||||||||||||    
T  16919262 ttggttttcaacaaaaagttactacttttagttaccttaacatgtgcaatattgcaca 16919319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 22705621 - 22705467
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttg 103  Q
    ||||||||||||||||||  |||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||  ||| ||| |||||||||||    
T  22705621 atgtgcaaatttgcacattttaagaagtttaaagtagtaattttaacttgaaacttgtgttttttatattaaatatgtaactttaaattaataattgttg 22705522  T
Q  104 gttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  22705521 gttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 22705467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 13351226 - 13351377
Alignment:
Q  8 gcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttt 107  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||  ||||||| ||||||||||| |||    
T  13351226 gcaaatttgcacatgttaagaagtttaaagtagtaactttgacttagaacttgtgttttttatatttaatatgtaacttttaattaataattgttgattt 13351325  T
Q  108 tcaatgaaaaattatc-acttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||| || | |||||||||| ||||||||  ||||||||||||||    
T  13351326 tcaataaaaaaataactacttttagttaccttaacatgtgcaatattgcaca 13351377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16123448 - 16123290
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||| ||||||||||||   |||||| || |||||    
T  16123448 atcatgtgcaaatttgcacatgataagaagtttaaattagtaattttgattaggaacttgtgttttttatattaaatatgtaacatttaatcaacaattg 16123349  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcacag 157  Q
    || |||||||||||||| |||   ||||||||| ||||||||  |||||||||||||||    
T  16123348 tttgttttcaatgaaaagttacttcttttagttaccttaacatgtgcaatattgcacag 16123290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 8770894 - 8771032
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||| || || ||||||||| ||||||||||||  ||||||||||||||||    
T  8770894 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaatttttgttttttatattaaatatgtaacttttaataaataattg 8770993  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaa 140  Q
    |||||||| | |||||| |||  || ||||||||||||||    
T  8770994 ttggtttttattgaaaagttactac-tttagttgccttaa 8771032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 2060053 - 2060187
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgtt 102  Q
    |||||||||||| |||||| |||||| ||||||||||||||||| |||||||| |||||| ||||| ||||||||||||| | |||||||||||||||||    
T  2060053 atgtgcaaatttacacatgttaagaaatttaaagtagtaactttaacttggaatttgtgtcttttatattaaatatgtagctctttaataaataattgtt 2060152  T
Q  103 ggttttcaatgaaaaattatcacttttagttgcct 137  Q
    | |||| |||||||| |||| ||||||||||||||    
T  2060153 gatttttaatgaaaagttattacttttagttgcct 2060187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 15411632 - 15411788
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgt 101  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||   ||||| ||||||||||||| |||||||||||| |||||    
T  15411632 catgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagctttttaataaattattgt 15411731  T
Q  102 tggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    || |||||||| ||||||||  |||||||||| | ||||||  ||||||||||||||    
T  15411732 tgtttttcaataaaaaattactacttttagttactttaacatgtgcaatattgcaca 15411788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 39904074 - 39904213
Alignment:
Q  19 catgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaa 118  Q
    |||| |||||||||||||||||||| ||| ||||||||||| ||||||||| |||||| |||||| ||||||| ||||||||||| |||||||||||||     
T  39904074 catgttaagaagtttaaagtagtaaatttaacttggaacttatgttttttatattaaacatgtagcttttaatcaataattgttgattttcaatgaaaag 39904173  T
Q  119 ttatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||  |||||||||| ||||||||  ||||||||||||||    
T  39904174 ttactacttttagttaccttaacatgtgcaatattgcaca 39904213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 26229864 - 26230018
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgtt 102  Q
    ||||||||||||||  || | ||||||||||||| |||||||||||||||  || || | ||||||| ||||||||||||  ||||||| ||||||||||    
T  26229864 catgtgcaaatttgtccaggttaagaagtttaaaatagtaactttgacttaaaatttatattttttatattaaatatgtaacttttaatcaataattgtt 26229963  T
Q  103 ggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||| ||| ||||||||  |||||||||| ||||||||  ||||||||||||||    
T  26229964 ggtttt-aataaaaaattactacttttagttaccttaacatgtgcaatattgcaca 26230018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 284 - 379
Target Start/End: Complemental strand, 5573747 - 5573652
Alignment:
Q  284 ttgttcttggttggttccttaattattatctggatttattagcttcattagattttcttcttagagatggattctataataaagacatggttggtg 379  Q
    |||||||||||||||||||||||||| |||||||||   ||||||||||||| |||||||||||||||||| |||||||| || ||||||||||||    
T  5573747 ttgttcttggttggttccttaattatcatctggattctgtagcttcattagactttcttcttagagatggaatctataatcaaaacatggttggtg 5573652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 15231998 - 15231883
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgtt 102  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||||  ||| | ||||||||||| | |||||||||||||| | ||    
T  15231998 atgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttaaaacttgtgcatttcatattaaatatgtaactttttaataaataagtttt 15231899  T
Q  103 ggttttcaatgaaaaa 118  Q
    | |||||||| |||||    
T  15231898 gtttttcaataaaaaa 15231883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 41492141 - 41492279
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||| ||||| ||||||||  ||||  |||||||||| ||||||| | |||||||||    
T  41492141 atcatgtataaatttgcacatgataagaagtttaaagtaataactttaacttgaaacttgtgcattttttattaaatatgaagtttttta-aaataattg 41492239  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaa 140  Q
    ||  |||||||| | ||| ||| ||||||| || ||||||    
T  41492240 ttctttttcaataataaaatattacttttaatttccttaa 41492279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 9747487 - 9747354
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    ||||||||||||||| |||||| ||||||||||||| |||||| |||| ||||||||||||   ||||| ||||||||||||| ||||| | ||||| ||    
T  9747487 atcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatatgtagcttttttacaaatagtt 9747388  T
Q  100 gttggttttcaatgaaaaattatcacttttagtt 133  Q
    |||| |||||||| || | |||  ||||||||||    
T  9747387 gttgtttttcaataaatagttactacttttagtt 9747354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 156
Target Start/End: Complemental strand, 10690915 - 10690795
Alignment:
Q  38 tagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgcct 137  Q
    |||||| ||| | ||| ||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||  | ||||||||  ||    
T  10690915 tagtaattttaatttgaaacttatgttttttatattaaatatgtagcttttaatcaataattgttggtttttaatgaaaaattactaattttagttaact 10690816  T
Q  138 taaca--tgcaatattgcaca 156  Q
    |||||  ||||||||||||||    
T  10690815 taacatgtgcaatattgcaca 10690795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 37471757 - 37471866
Alignment:
Q  10 aaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggtttt 108  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||| |||||||   ||||| ||||||||||||| |||||||||||| |||||||  |||    
T  37471757 aaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagttttttaataaattattgttgtcttt 37471856  T
Q  109 caatgaaaaa 118  Q
    |||| |||||    
T  37471857 caataaaaaa 37471866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 45062368 - 45062225
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||  ||||||||| ||| ||||||||||   ||||||||||||  ||||| |||||| |||| | ||||||||||||||||    
T  45062368 atcatgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgcattttatattaaacatgtaactttttaataaataatt 45062269  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
     ||| |||| ||| |||| ||| |||||||| |||  |||||||    
T  45062268 tttgttttttaataaaaagttaccacttttaattgttttaacat 45062225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 9450427 - 9450315
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||| |||||||| |||||| ||||||||||||  ||||  |||||| |||||| ||||  ||||||||| | | ||||||||||||||||    
T  9450427 atcatgtgcaaatctgcacatgttaagaaatttaaagtagtatgtttgtattggaatttgtgtattttctattaaatatataattttttaataaataatt 9450328  T
Q  100 gttggttttcaat 112  Q
    |||| ||||||||    
T  9450327 gttgtttttcaat 9450315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 12919358 - 12919517
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    ||||||||||||||| |||||| ||| || |||||| ||||||||||  |||| |||||||   ||||| ||||||||||||| |||||||||||| |||    
T  12919358 atcatgtgcaaatttacacatgttaaaaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaatatgtagttttttaataaattatt 12919457  T
Q  100 gttggttttcaat-gaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    | |  ||||||||  ||||||||  ||||||| |||| ||||||  ||||||||||||||    
T  12919458 gctacttttcaataaaaaaattaatacttttaattgctttaacatgtgcaatattgcaca 12919517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 20566025 - 20566137
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagt-ttttaataaataatt 99  Q
    ||||||||||||||| |||||| |||||||||||||||| ||  ||||  ||||||||||||| ||||  ||||||||  || | |||||||||||||||    
T  20566025 atcatgtgcaaatttacacatgttaagaagtttaaagtattatgtttgtattggaacttgtgtattttttattaaatagataatattttaataaataatt 20566124  T
Q  100 gttggttttcaat 112  Q
    |||| ||||||||    
T  20566125 gttgtttttcaat 20566137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 7757794 - 7757937
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||||| |||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  7757794 atcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataatt 7757893  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||||||||| ||| |||| || | |||||||||| ||||||||||    
T  7757894 gttggtttt-aataaaaacttgttacttttagttaccttaacatg 7757937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 12438727 - 12438813
Alignment:
Q  71 attaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 156  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||| |||| | ||||||||| || |||  |||||||||||||||    
T  12438727 attaaatatatagtttttaataaataattgttggtttt-aatgaaaagttattatttttagttgtctgaacatatgcaatattgcaca 12438813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 5583566 - 5583723
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||| ||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  5583566 atcatgcgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataatt 5583665  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  5583666 gttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 5583723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 394
Target Start/End: Complemental strand, 5593463 - 5593404
Alignment:
Q  335 attttcttcttagagatggattctataataaagacatggttggtgttccctattcatctc 394  Q
    |||||||||||||||||||| ||||| |||||| ||||||||||||| ||||||| ||||    
T  5593463 attttcttcttagagatggaatctatgataaagccatggttggtgtttcctattcttctc 5593404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 12051652 - 12051707
Alignment:
Q  324 agcttcattagattttcttcttagagatggattctataataaagacatggttggtg 379  Q
    ||||||||||||||||||||||||||| ||| ||||| || |||||||||||||||    
T  12051652 agcttcattagattttcttcttagagacggaatctatgatcaagacatggttggtg 12051707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 12064524 - 12064591
Alignment:
Q  312 tctggatttattagcttcattagattttcttcttagagatggattctataataaagacatggttggtg 379  Q
    |||||||| | ||||||||||| |||||||||||||||| ||| ||||| || |||||||||||||||    
T  12064524 tctggattcactagcttcattatattttcttcttagagacggaatctatgatcaagacatggttggtg 12064591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 23932735 - 23932577
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataatt 99  Q
    |||||||||||||||||| ||  ||||||||||||| ||||||  |||  | ||||||||||  ||||| ||||| |||   | ||||||||||||||||    
T  23932735 atcatgtgcaaatttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaataaataatt 23932636  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||  ||||||||| ||| |||  | |||||||| | ||||||  ||||||||||||||    
T  23932635 gttctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcaca 23932577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 22162139 - 22162228
Alignment:
Q  55 aacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||||||||  ||||| ||||| ||||||| |||||||||| ||||||||||||| |||| |||| |||  |||||||||||||||||||||    
T  22162139 aacttgtgcattttatattaactatgtagatttttaataattaattgttggttt-caataaaaagttactacttttagttgccttaacatg 22162228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29157837 - 29157915
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||||| |||||| ||| || |||||||||||  ||||||||||| | ||||  |||||||||    
T  29157837 atcatgtgcaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgtattaaatat 29157915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24729585 - 24729702
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  |||||| |||| | ||||  ||||| ||  | | ||||||||||||||||    
T  24729585 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaattacataactttttaataaataatt 24729684  T
Q  100 gttggttttcaatgaaaa 117  Q
     ||  |||||||| ||||    
T  24729685 atttattttcaataaaaa 24729702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 35729285 - 35729188
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||| |||||||||||||| | ||||||||||||||| || |||   ||||||||||||| ||||| | ||||||| | | ||||||||||||||||    
T  35729285 catgtacaaatttgcacatgttgagaagtttaaagtagcaaatttatattggaacttgtgtattttatagtaaatatataaatttttaataaataatt 35729188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 25998094 - 25998154
Alignment:
Q  84 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||||||||||||||||||| |||||||| |||| || |||||||||||| | ||||||||    
T  25998094 tttttaataaataattgttgtttttcaataaaaagttttcacttttagttactttaacatg 25998154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 12059072 - 12059139
Alignment:
Q  312 tctggatttattagcttcattagattttcttcttagagatggattctataataaagacatggttggtg 379  Q
    |||||||| | ||| ||||||| |||||||||||||||| ||| ||||| || |||||||||||||||    
T  12059072 tctggattcactagtttcattatattttcttcttagagacggaatctatgatcaagacatggttggtg 12059139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 43388858 - 43388932
Alignment:
Q  84 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||||||||||| |||||||| |||||||   |||||||||||| |||| |  ||||||||||||||    
T  43388858 tttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcaca 43388932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 43941864 - 43941949
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 88  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| ||||||||| || |||||    
T  43941864 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatatatttttt 43941949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 3286663 - 3286587
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  3286663 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 3286587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6109559 - 6109523
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaag 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  6109559 atcatgtgcaaatttgcacatgttaagaagtttaaag 6109523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 34213961 - 34214103
Alignment:
Q  5 tgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag---tttttaataaataattgt 101  Q
    |||||||||||||||||| |||||| |||||| |||||| |||   ||||||||||    ||||  |||||| || ||    ||||||  ||||||||||    
T  34213961 tgtgcaaatttgcacatgttaagaaatttaaaatagtaatttttcattggaacttgaacattttttattaaaaatatataactttttataaaataattgt 34214060  T
Q  102 tggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||||||||||| |||| |||  | |||||||||| ||||||||    
T  34214061 tggttttcaataaaaacttactatttttagttgctttaacatg 34214103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38248428 - 38248536
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||| |||   ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  38248428 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttacattggaacttgaacattttgtattaaatatataattttttgttaaataatt 38248527  T
Q  100 gttggtttt 108  Q
    |||||||||    
T  38248528 gttggtttt 38248536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 8065293 - 8065258
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaa 36  Q
    |||||||||||||||||||||| |||||||||||||    
T  8065293 atcatgtgcaaatttgcacatgttaagaagtttaaa 8065258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 26003354 - 26003389
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaa 36  Q
    |||||||||||||||||||||| |||||||||||||    
T  26003354 atcatgtgcaaatttgcacatgttaagaagtttaaa 26003389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 5587269 - 5587184
Alignment:
Q  293 gttggttccttaattattatctggatttattagcttcattagattttcttcttagagatggattctataataaagacatggttggt 378  Q
    ||||||||||||| ||||  |||||||   ||||||||||||||| ||| |||| | ||||| | |||||| |||| |||||||||    
T  5587269 gttggttccttaaatatttcctggattagctagcttcattagattgtctgcttaaatatggaatttataatcaagaaatggttggt 5587184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 5853471 - 5853504
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagttta 34  Q
    |||||||||||||||||||||| |||||||||||    
T  5853471 atcatgtgcaaatttgcacatgttaagaagttta 5853504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16493540 - 16493573
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagttta 34  Q
    |||||||||||||||||||||| |||||||||||    
T  16493540 atcatgtgcaaatttgcacatgttaagaagttta 16493573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 27865905 - 27865965
Alignment:
Q  82 agtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
    |||||||||||| | ||||||| |||||||| ||||||||| |||||||||| | |||||||    
T  27865905 agtttttaataattgattgttgtttttcaat-aaaaattattacttttagtttctttaacat 27865965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 3951418 - 3951342
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||| ||||||||| ||||| |||||||||    
T  3951418 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaatat 3951342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 8847955 - 8847879
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||| ||||||||| ||||| |||||||||    
T  8847955 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaatat 8847879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 4e-63; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 19889510 - 19889353
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  19889510 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaataaataattg 19889411  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||||||| |||  |||||||||||||||||||  ||||||||||||||    
T  19889410 ttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcaca 19889353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 5909290 - 5909447
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  5909290 atcatgtgtaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtagcttttaataaataattg 5909389  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||||||| |||   ||||||||||||||||||  ||||||||||||||    
T  5909390 ttggttttcaatgaaaagttactgcttttagttgccttaacatgtgcaatattgcaca 5909447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 39757118 - 39757275
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| ||||| || |||||||||||| ||||||||||||| ||||||| ||||||||    
T  39757118 atcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaacttgaaatttgtgttttttatattaaatatgtagcttttaatcaataattg 39757217  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||| |||||||||||||||||  |||||||||| ||||||||  ||||||||||||||    
T  39757218 ttgattttcaatgaaaaattactacttttagttaccttaacatgtgcaatattgcaca 39757275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 9332131 - 9331974
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||   |||||| ||||||||    
T  9332131 atcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaacatttaatcaataattg 9332032  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||| ||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  9332031 ttgattttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 9331974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 23982763 - 23982907
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| | |||||||||||| |||||    
T  23982763 atcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatttaagtttttaataattaatt 23982862  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||||||||| |||||||| |||  |||||||||||||||||||||    
T  23982863 gttggttttgaatgaaaagttactacttttagttgccttaacatg 23982907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 7170172 - 7170015
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||| |||||||||| |||||    
T  7170172 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaatt 7170073  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| |||  | |||||||||||||||||  ||||||||||||||    
T  7170072 gttgg-tttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcaca 7170015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 3561886 - 3562043
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||| ||||||| |||||||     
T  3561886 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttatattaaatatgtagcttttaatcaataatta 3561985  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||| ||||||||||||| |||   ||||||||| ||||||||  ||||||||||||||    
T  3561986 ttgattttcaatgaaaagttactgcttttagttaccttaacatgtgcaatattgcaca 3562043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 36548468 - 36548625
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||  || |||| ||||||| |||||||||||| | |||||| ||||||||    
T  36548468 atcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttaaaatttgtattttttatattaaatatgtaatatttaatcaataattg 36548567  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||| ||||||||  |||||||||| ||||||||  ||||||||||||||    
T  36548568 ttggttttcaataaaaaattactacttttagttcccttaacatgtgcaatattgcaca 36548625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 12085939 - 12086082
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||||||||||||||||| ||||||||||||||  ||||| ||||||||| ||||||||||||||| ||||||||| ||  ||||||||||||||||    
T  12085939 atcatgtgcaaatttgcacataataagaagtttaaataagtaattttgacttgaaacttgtgttttttatattaaatatttaacttttaataaataattg 12086038  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||| ||||||| ||||| |||  |||||||||||||||||||||    
T  12086039 ttgattttcaacgaaaagttactacttttagttgccttaacatg 12086082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 384444 - 384570
Alignment:
Q  7 tgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggtt 106  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||||| ||    
T  384444 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgttttttttatattaaatatgtagcttttaatcaataattgttgatt 384543  T
Q  107 ttcaatgaaaaattatcacttttagtt 133  Q
    ||||||||||| |||  ||||||||||    
T  384544 ttcaatgaaaagttactacttttagtt 384570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 47120228 - 47120359
Alignment:
Q  27 gaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcact 126  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||   |||||| |||||||||||||||||||||||||||||  |||    
T  47120228 gaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatttaatcaataattgttggttttcaatgaaaaattactact 47120327  T
Q  127 tttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||| || |||||  ||||||||||||||    
T  47120328 tttagttaccataacatgtgcaatattgcaca 47120359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 18102238 - 18102359
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtg-ttttttaaattaaatatgtagtttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||| ||||||| ||||||||||||   |||||| |||||||    
T  18102238 atcatgtgcaaatttgcacatgttaagaagtttaaattaataactttgacttgaaacttgtgtttttttatattaaatatgtaacatttaatcaataatt 18102337  T
Q  100 gttggttttcaatgaaaaatta 121  Q
    |||| |||||||||||||||||    
T  18102338 gttgattttcaatgaaaaatta 18102359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41331464 - 41331551
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 88  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||    
T  41331464 atcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttt 41331551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 24462963 - 24463106
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt-aataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||| || ||||||||||||  |  ||||   ||||| |||||||||||||||||| |||||||| ||    
T  24462963 atcatgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaatatgtagttttttaataaatactt 24463062  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||| |||||||| | ||||||  |||||||||||||||||||||    
T  24463063 gttg-ttttcaataagaaattactacttttagttgccttaacatg 24463106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 25709407 - 25709551
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||||||   ||| | |||||||| |||| |||||||||||| |||    
T  25709407 atcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaataggtagctttttaataaattatt 25709506  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||| || ||||| ||||||||  |||||||||||  ||||||||    
T  25709507 gttgtttatcaataaaaaattactacttttagttgatttaacatg 25709551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24250668 - 24250602
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttt 67  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24250668 atcatgtggaaatttgaacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttt 24250602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 24250413 - 24250326
Alignment:
Q  71 attaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  24250413 attaaatatgtagcttttaataaataattgttggttttcaatgaaaagttaatacttttagtttccttaacatgtgcaatattgcaca 24250326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 47457469 - 47457627
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||||||||| || ||  ||||| |||| || ||||| |||| |||||||||||    
T  47457469 atcatgtgcaaatttgcacatgttaaaaaatttaaagtagtaactttgacttggaatttatgcattttatattatatgtgtagcttttaaataaataatt 47457568  T
Q  100 gttggttttcaat-gaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||  ||||||||  ||||||||  |||||||||||  ||||||  ||||||||||||||    
T  47457569 gtt-attttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcaca 47457627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 39869276 - 39869137
Alignment:
Q  16 gcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaatga 114  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||||  ||| | ||||||||||||  |||||||||| ||||||||||||||||||||    
T  39869276 gcacatgataagaagtgtaaagtagtaa-tttgacttgaaacttgtgcattt-atattaaatatgtaaatttttaataattaattgttggttttcaatga 39869179  T
Q  115 aaaattatcacttttagttgccttaaca--tgcaatattgca 154  Q
    ||| |||  | |||||||| | ||||||  ||||||||||||    
T  39869178 aaagttactatttttagtttctttaacatgtgcaatattgca 39869137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 5833525 - 5833424
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||| | ||| |||||||||  || || ||||||||||||| ||||||||||||| ||    
T  5833525 atcatgtgcaaatttgcacatgttaaaaagtttaaagcagtaacttcgtcttagaacttgtgcattctatattaaatatgtagctttttaataaatagtt 5833426  T
Q  100 gt 101  Q
    ||    
T  5833425 gt 5833424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 7040260 - 7040371
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaa-atatgtagtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||||||||||||| ||  ||||| ||||||||||||| ||||  ||||| ||||  | ||||||||||||||||    
T  7040260 atcatgtgcaaatttgcacatgttaagaagtttaaagtactatgtttgatttggaacttgtgtattttctattaatatat-aaatttttaataaataatt 7040358  T
Q  100 gttggttttcaat 112  Q
    |||| ||| ||||    
T  7040359 gttgttttccaat 7040371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22334029 - 22334097
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttta 69  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||  ||||||||||    
T  22334029 atcatgtgcaaatttgtacatgttaagaagtttaaagtagtaactttgacttgaaacacgtgtttttta 22334097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 33343158 - 33343001
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  33343158 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaatatataactttttgttaaataatt 33343059  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  33343058 gttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 33343001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8595067 - 8595000
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttta 69  Q
    ||||||||||||||| |||||| ||||||||||||| |||| ||||| |||||||||||||||||||||    
T  8595067 atcatgtgcaaatttacacatgttaagaagtttaaa-tagtgactttaacttggaacttgtgtttttta 8595000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 156
Target Start/End: Complemental strand, 19868245 - 19868126
Alignment:
Q  40 gtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgcctt 138  Q
    |||| |||| |||| ||||||||| ||||| ||||||||| ||  ||||| ||||||||||| || ||||||||||||| |||  ||||||||||| |||    
T  19868245 gtaagtttgtcttgaaacttgtgtattttatattaaatatataactttttgataaataattggtgtttttcaatgaaaatttactacttttagttgtctt 19868146  T
Q  139 aaca--tgcaatattgcaca 156  Q
    ||||  ||||||||||||||    
T  19868145 aacatgtgcaatattgcaca 19868126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 46290180 - 46290037
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  46290180 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataatt 46290081  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||||| ||||||| |||| ||   |||||||||| ||||||||||    
T  46290080 gttgg-tttcaataaaaacttgctacttttagttaccttaacatg 46290037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 42750453 - 42750301
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||| |||||||||||| ||| ||||||||||||||||||| |||||||||     || ||  ||||| ||||||  ||| | ||||||||||||||||    
T  42750453 atcatatgcaaatttgcatatgttaagaagtttaaagtagtagctttgactt-----ttttgcattttatattaaaattgtaactttttaataaataatt 42750359  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 156  Q
     || ||||||||| |||| |||| | |||||||||| |||||  |||||||||||||||    
T  42750358 att-gttttcaataaaaagttattatttttagttgctttaacatatgcaatattgcaca 42750301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 8170691 - 8170593
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataatt 99  Q
    ||||||| ||||||| |||||| ||| |||||||||||||||||||| ||||  ||||| | ||||||| ||||||||| ||  ||||||| |||||||    
T  8170691 atcatgtacaaatttacacatgttaaaaagtttaaagtagtaactttaacttaaaacttttattttttatattaaatatataacttttaatcaataatt 8170593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 34270431 - 34270278
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  34270431 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataatt 34270332  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| ||    ||||||||| ||||||||  ||||||||||||||    
T  34270331 gttgg-tttcaataaaaactt----cttttagttaccttaacatgtgcaatattgcaca 34270278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 7899494 - 7899615
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| ||| || |||||| | |||| |||| |||  ||||||| | ||||| ||||||||| | |  ||||||||||| |||    
T  7899494 atcatgtgcaaatttgcacatgttaaaaaatttaaaatggtaagtttgtcttataacttgtatattttatattaaatatataacattttaataaattatt 7899593  T
Q  100 gttggttttcaatgaaaaatta 121  Q
    | || |||||||||||||||||    
T  7899594 ggtgtttttcaatgaaaaatta 7899615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 8091320 - 8091464
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||||  ||| ||||| |   ||||   |||||||| | | ||||||||||||||||    
T  8091320 atcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttgcattgtaacttttacattttgtgttaaatatataactttttaataaataatt 8091419  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||| |||||||| |||| ||   |||||||||||| || |||||    
T  8091420 attgattttcaataaaaatttgctacttttagttgctttgacatg 8091464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4969943 - 4969883
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  4969943 atcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 4969883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26300741 - 26300681
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    ||||||| |||||||||||||| ||| ||||||||| |||||||||||| ||| |||||||    
T  26300741 atcatgtacaaatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgt 26300681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 12624798 - 12624688
Alignment:
Q  9 caaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataattgttggttt 107  Q
    |||||||||||||| |||||| |||||| | |||| |||| |||  ||||||||| ||||| |||||||||  | |||||||||||||||||| |  |||    
T  12624798 caaatttgcacatgttaagaaatttaaaatggtaagtttgtctta-aacttgtgtattttatattaaatatacaagtttttaataaataattgatatttt 12624700  T
Q  108 tcaatgaaaaat 119  Q
    ||||| ||||||    
T  12624699 tcaataaaaaat 12624688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 12650907 - 12650833
Alignment:
Q  84 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 156  Q
    ||||||||||||||||| | |||||||||||||| |||  | ||||||||| |||||||||  ||||||||||||    
T  12650907 tttttaataaataattggtagttttcaatgaaaagttactatttttagttggcttaacatgtacaatattgcaca 12650833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 3530122 - 3530265
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttt-taataaataatt 99  Q
    ||||||||||||||| |||||  ||||| ||||| | |||||| |||   ||| || |||||  ||||| || |||||| || |||| ||||||||||||    
T  3530122 atcatgtgcaaatttacacatattaagacgtttagaatagtaagtttttattgaaatttgtgcattttatatcaaatatataattttttaataaataatt 3530221  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||| ||||||||| ||||||||| | | ||| |||| ||||||||    
T  3530222 gtt-gttttcaataaaaaattattattcttaattgctttaacatg 3530265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26037263 - 26037203
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||||||||||||| ||| ||||||||||||| ||| || ||||  |||||||||||    
T  26037263 atcatgtgcaaatttgcagatgttaagaagtttaaaatagaaattttgtattggaacttgt 26037203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29398142 - 29398202
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    ||||||| |||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  29398142 atcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 29398202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 38798080 - 38798156
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  38798080 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 38798156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 38798218 - 38798294
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  38798218 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 38798294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 42593404 - 42593480
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  42593404 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 42593480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45501629 - 45501569
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||||||||||||||||  ||||||||||||| ||| || ||||  |||||||||||    
T  45501629 atcatgtgcaaatttgcacatcttaagaagtttaaaatagaaattttgtattggaacttgt 45501569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 45645535 - 45645459
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  45645535 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 45645459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 820549 - 820584
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaa 36  Q
    |||||||||||||||||||||| |||||||||||||    
T  820549 atcatgtgcaaatttgcacatgttaagaagtttaaa 820584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 32117984 - 32117827
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||||| | || |||  |||| ||||||| | || || ||||||||  | | |||||||| |||||||    
T  32117984 atcatgtgcaaatttgcacatgttaagaaatttaaagtggcaagtttatcttgaaacttgtatattctatattaaatagataactttttaat-aataatt 32117886  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    | || ||| ||||| ||| ||   || ||||||| ||||||||  ||||||||||||||    
T  32117885 ggtgttttccaatgcaaagttgctacatttagtttccttaacatgtgcaatattgcaca 32117827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33072151 - 33072104
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 48  Q
    |||||||||||||||| ||||| |||||| |||||| |||||||||||    
T  33072151 atcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttg 33072104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26050469 - 26050527
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaactt 59  Q
    |||||||||||||||||||||| |||||| |||||| | |||| |||| |||| |||||    
T  26050469 atcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttgtcttgtaactt 26050527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26059828 - 26059886
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaactt 59  Q
    |||||||||||||||||||||| |||||| |||||| | |||| |||| |||| |||||    
T  26059828 atcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttgtcttgtaactt 26059886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 28061333 - 28061418
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 88  Q
    |||||||||||||||||||| |||  |   ||||||||||| |||   ||||||||||||| ||||| ||||||||| || |||||    
T  28061333 catgtgcaaatttgcacatgttaaagatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatatatttttt 28061418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 24699240 - 24699188
Alignment:
Q  66 tttaaattaaatatgtagtttt-taataaataattgttggttttcaatgaaaa 117  Q
    |||| ||||||||||||  ||| |||||||||||||||| |||||||||||||    
T  24699240 tttatattaaatatgtaactttataataaataattgttgtttttcaatgaaaa 24699188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 47707901 - 47708001
Alignment:
Q  10 aaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgttggtttt 108  Q
    |||||| || ||| ||||||||||||| |||||| ||||| ||| ||||| |   ||||  ||||||||| | | |||||||||||||||||||| ||||    
T  47707901 aaattttcatatgttaagaagtttaaaatagtaattttgaattgaaacttatacattttgtattaaatatataactttttaataaataattgttgttttt 47708000  T
Q  109 c 109  Q
    |    
T  47708001 c 47708001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 4e-63; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11611084 - 11610927
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  11611084 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaataaataattg 11610985  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||||||| |||  |||||||||||||||||||  ||||||||||||||    
T  11610984 ttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcaca 11610927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 20938227 - 20938069
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtt-ttttaaattaaatatgtagtttttaataaataatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||| |||||||    
T  20938227 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttttatattaaatatgtaatttttaatcaataatt 20938128  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||| ||||||||| |||| |||| |||||||||| ||||||||  ||||||||||||||    
T  20938127 gttagttttcaataaaaagttattacttttagttaccttaacatgtgcaatattgcaca 20938069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 13495464 - 13495320
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataatt 99  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||| |||||||||||||||||    
T  13495464 atcatgtgaaaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatatgtaggtttttaataaataatt 13495365  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||| |||||||| ||||||||  |||||||||| ||||||||||    
T  13495364 gttgattttcaataaaaaattactacttttagttaccttaacatg 13495320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 3863499 - 3863342
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  3863499 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttagcttggaacttgtgttttttatattaaatatgtagcttttaatcaataattg 3863400  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
     || ||||||||||||| |||  || ||||||| ||||||||  ||||||||||||||    
T  3863399 ctgattttcaatgaaaagttactacctttagttaccttaacatgtgcaatattgcaca 3863342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 16875037 - 16875175
Alignment:
Q  5 tgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttgg 104  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||| || |||||||||    
T  16875037 tgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagcttttaatcaacaattgttgg 16875136  T
Q  105 ttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
    |||||||| ||||||||  |||||||||| |||||||||    
T  16875137 ttttcaataaaaaattactacttttagttaccttaacat 16875175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 50364348 - 50364217
Alignment:
Q  13 tttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaat 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||||    
T  50364348 tttgcacatgctaagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaatcaataattgttggttttcaat 50364249  T
Q  113 gaaaaattatcacttttagttgccttaacatg 144  Q
     | || |||  |||||||||| |||| |||||    
T  50364248 tataagttactacttttagttacctttacatg 50364217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 29686490 - 29686374
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| |||| ||| ||||||||||||||||    
T  29686490 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgttttttatattacatatatagcttttaataaataattg 29686391  T
Q  101 ttggttttcaatgaaaa 117  Q
    ||| | |||| ||||||    
T  29686390 ttgatattcagtgaaaa 29686374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 40497217 - 40497074
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||  ||||| ||||| ||||||| |||||||||| |||||    
T  40497217 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgcattttatattaactatgtagatttttaataattaatt 40497118  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||| | ||||||| |||| |||  |||||||||||||||||||||    
T  40497117 gtt-gatttcaataaaaagttactacttttagttgccttaacatg 40497074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 38389617 - 38389473
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |    
T  38389617 atcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagt 38389518  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||| |||||||| ||||||||  |||||||| |  |||||||||    
T  38389517 tttgtttttcaataaaaaattactacttttagatatcttaacatg 38389473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 54621256 - 54621383
Alignment:
Q  31 tttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcactttta 130  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||||||   |||||| |||||||||||||||| ||||||||||||  |||||||    
T  54621256 tttaaattagtaactttgacttggaagttgtgttttttatattaaatatgtaacatttaatcaataattgttggtttttaatgaaaaattactactttta 54621355  T
Q  131 gttgccttaac--atgcaatattgcaca 156  Q
     || |||||||  |||||||||||||||    
T  54621356 attaccttaacatatgcaatattgcaca 54621383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24978816 - 24978700
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||| ||| |||||||||| ||| |||||||||||||| || |||||||| ||||||||||||||||||| |||||||| |||||||| |||||||     
T  24978816 atcatgtacaagtttgcacatgttaacaagtttaaagtagttacgttgacttgaaacttgtgttttttaaatttaatatgtaatttttaatcaataatta 24978717  T
Q  101 ttggttttcaatgaaaa 117  Q
    |||||| ||||| ||||    
T  24978716 ttggttctcaataaaaa 24978700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 32553536 - 32553393
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||| |||||| |||||| ||||||||||||| || ||||||| | ||| ||||||||||||||| |||||||||||| | |||||  |||||||     
T  32553536 atcatgtgtaaatttacacatgttaagaagtttaaattaataactttaatttgaaacttgtgttttttatattaaatatgtaatatttaactaataatta 32553437  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||| ||||||||||||| |||  ||||||| || ||||||||||    
T  32553436 ttgattttcaatgaaaagttactacttttaattaccttaacatg 32553393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 58 - 156
Target Start/End: Original strand, 51339249 - 51339349
Alignment:
Q  58 ttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcac 155  Q
    |||||||||||| |||||||| |||| ||||||| |||||||||||||||||||||||||||||  | |||||||| ||||||||  |||||||||||||    
T  51339249 ttgtgttttttatattaaatacgtagcttttaatcaataattgttggttttcaatgaaaaattactatttttagttaccttaacatgtgcaatattgcac 51339348  T
Q  156 a 156  Q
    |    
T  51339349 a 51339349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11611146 - 11611090
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaac 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11611146 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaac 11611090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 46492351 - 46492509
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttt-ttaataaataatt 99  Q
    ||||||||||||||| |||| | |||||| ||||||||||||||||||  ||| |||||||   ||||  ||||||||| ||  |  |||||||||||||    
T  46492351 atcatgtgcaaattttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaatatataactcgttaataaataatt 46492450  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||| |||||||| |||| ||| ||||||||||||| ||||||  ||||||||||||||    
T  46492451 gttgtttttcaataaaaacttaccacttttagttgctttaacatgtgcaatattgcaca 46492509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23523116 - 23523034
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag 83  Q
    |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||  ||| | |||||||||||||    
T  23523116 atcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtag 23523034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 36426417 - 36426535
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||| |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |    
T  36426417 atcatgtgtaaatttacacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagt 36426516  T
Q  100 gttggttttcaatgaaaaa 118  Q
     ||| ||||| || |||||    
T  36426517 tttgtttttcgataaaaaa 36426535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41151803 - 41151735
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttta 69  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||| |||||||    
T  41151803 atcatgtgcaaatttacacatgataagaagtttaaagtagtaatttgaacttggaacttgtatttttta 41151735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 2571438 - 2571281
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  2571438 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataatt 2571339  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  2571338 gttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 2571281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 51618217 - 51618062
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||| || | |||||||||  |||||||||||   ||||  ||||||||| ||  ||||||||||||||||    
T  51618217 atcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaatatata--ttttaataaataattg 51618120  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||| |||||| | |||| ||    ||||||||||  ||||||  ||||||||||||||    
T  51618119 ttgtttttcagtaaaaacttgctgcttttagttgttttaacatgtgcaatattgcaca 51618062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 38786343 - 38786464
Alignment:
Q  12 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaa 111  Q
    ||||||||||| ||||||||||||| |||||| ||||| ||| || |||||  ||||| | ||||| |||| |||||||||||||||||||  |||||||    
T  38786343 atttgcacatgttaagaagtttaaaatagtaattttgatttgaaatttgtggattttatactaaatgtgtattttttaataaataattgtt-attttcaa 38786441  T
Q  112 tgaaaaattatcacttttagttg 134  Q
    | ||||||||  | |||||||||    
T  38786442 taaaaaattactatttttagttg 38786464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 37055374 - 37055517
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataatt 99  Q
    |||||||| ||||||||||||  ||||||||||||| ||||||  |||  | ||||||||||||||||| ||||| |||   | ||||||||||||||||    
T  37055374 atcatgtgaaaatttgcacatattaagaagtttaaaatagtaaagttgtatcggaacttgtgttttttatattaactataaaactttttaataaataatt 37055473  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
    |||  ||||||||| ||| |||  | |||||||| | |||||||    
T  37055474 gttctttttcaatgtaaagttactatttttagttcctttaacat 37055517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 10307936 - 10307779
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||| ||||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  10307936 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttgaacattttgtattaaatatataactttttgttaaataatt 10307837  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| ||   |||||||||| ||||| ||  ||||||||||||||    
T  10307836 gttgg-tttcaataaaaatttgctacttttagttaccttatcatgtgcaatattgcaca 10307779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 23638057 - 23638215
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataatt 99  Q
    |||||| ||||||||||||||| |||||| |||||| | |||| || | |||| ||||||||| ||||| |||||||||   | |||||| |||||||||    
T  23638057 atcatgagcaaatttgcacatgttaagaaatttaaaatggtaagttagtcttgaaacttgtgtattttatattaaatatacaactttttattaaataatt 23638156  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 156  Q
    | || ||||||||  ||| |||  ||||| ||||  |||||||||  ||||||||||||    
T  23638157 gatgtttttcaatagaaagttactactttaagttaacttaacatgcacaatattgcaca 23638215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 23803054 - 23803165
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataatt 99  Q
    ||||| |||||||||||||||| ||||||||||||| ||| || ||||  ||||||||||| | ||| | |||||||||   | |||| |||||||||||    
T  23803054 atcatatgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtatatttcatattaaatataaaacttttgaataaataatt 23803153  T
Q  100 gttggttttcaa 111  Q
    |||| |||||||    
T  23803154 gttgtttttcaa 23803165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39364878 - 39364955
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaata 78  Q
    ||||| |||||||||||||||| ||| |||||| || ||||||||||| |||| ||||||||  ||||| ||||||||    
T  39364878 atcatttgcaaatttgcacatgttaacaagttttaaatagtaactttgtcttgtaacttgtgcattttatattaaata 39364955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 36812419 - 36812380
Alignment:
Q  10 aaatttgcacatgataagaagtttaaagtagtaactttga 49  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  36812419 aaatttgcacatgttaagaagtttaaagtagtaactttga 36812380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 46845532 - 46845606
Alignment:
Q  84 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||||||||||| |||||||| |||||||   |||||||||||| |||| |  ||||||||||||||    
T  46845532 tttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcaca 46845606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 1569198 - 1569319
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||  ||||| | ||||| ||||||||||||| || ||||||||  |||||||||||   ||||| |||| |||||| | ||| |||||||| |||    
T  1569198 atcatgtataaattcgtacatgttaagaagtttaaaataataactttgtattggaacttgttcattttatattagatatgtaactttctaataaattatt 1569297  T
Q  100 gttggttttcaatgaaaaatta 121  Q
    |||| |||| ||| ||||||||    
T  1569298 gttgttttttaataaaaaatta 1569319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8165816 - 8165756
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||||||||||||||||| ||||||||||||| ||  || ||||  |||||||||||    
T  8165816 atcatgtgcaaatttgcacatgttaagaagtttaaaatataaattttgtattggaacttgt 8165756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 29932362 - 29932438
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  29932362 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 29932438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 29981516 - 29981592
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  29981516 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 29981592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 35414817 - 35414929
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||||| |||||| ||||||||| ||| ||||||||||   |||||| |||| | ||||  ||| ||||| | | |||| || ||||||||    
T  35414817 atcatgtgcaaatttacacatgttaagaagttcaaaatagtaactttatattggaagttgtatattttgtatttaatatataacttttgaacaaataatt 35414916  T
Q  100 gttggttttcaat 112  Q
    |||| ||||||||    
T  35414917 gttgtttttcaat 35414929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 50204573 - 50204517
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaac 57  Q
    |||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||    
T  50204573 atcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaac 50204517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 24569329 - 24569403
Alignment:
Q  84 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 156  Q
    ||||||||||||||||| || |||||||| |||| |||| | || |||||| |||||||||  ||||||||||||    
T  24569329 tttttaataaataattgatgtttttcaataaaaagttattatttgtagttgtcttaacatgtccaatattgcaca 24569403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 30214098 - 30214156
Alignment:
Q  80 gtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgcctta 139  Q
    |||| ||||||||||||||||||| ||||||||||||| ||| |  ||||||||||||||    
T  30214098 gtagcttttaataaataattgttgattttcaatgaaaagtta-ctattttagttgcctta 30214156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 31318811 - 31318665
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagt-ttttaataa--ataa 97  Q
    |||||||| ||||||||||||| ||||||||||||  ||| || ||||  |||||||||||   ||| | |||||||||  | | ||| |||||  ||||    
T  31318811 atcatgtgaaaatttgcacatgttaagaagtttaagatagaaattttgcattggaacttgtacatttaatattaaatataaaatctttgaataaatataa 31318712  T
Q  98 ttgttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||||| |||||||  |||||||| |||| |||||||  ||||||||    
T  31318711 ttgttgtttttcaagaaaaaattaccactattagttgttttaacatg 31318665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 37444232 - 37444159
Alignment:
Q  84 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||| ||||||||| ||| |||| |||| |||  |||||||||||||||||||  ||||||||||||||    
T  37444232 tttttaataattaattgttgattt-caataaaaagttactacttttagttgccttaacatgtgcaatattgcaca 37444159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 40930221 - 40930186
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaa 36  Q
    |||||||||||||||||||||| |||||||||||||    
T  40930221 atcatgtgcaaatttgcacatgttaagaagtttaaa 40930186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 49396548 - 49396502
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttga 49  Q
    |||||||||||||| ||||  |||||||||||||||||||| |||||    
T  49396548 catgtgcaaatttgtacatattaagaagtttaaagtagtaaatttga 49396502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 33474481 - 33474514
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagttta 34  Q
    |||||||||||||||||||||| |||||||||||    
T  33474481 atcatgtgcaaatttgcacatgttaagaagttta 33474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 51401607 - 51401550
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||| |||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  51401607 atgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 51401550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 23320210 - 23320122
Alignment:
Q  31 tttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaatgaaaaa 118  Q
    |||||| | |||| |||| |||| |||| |||| ||||| ||||||||| ||  ||||||||||||||||| || |||||||| |||||    
T  23320210 tttaaaatggtaaatttgtcttgaaactcgtgtattttatattaaatatatatctttttaataaataattgatgtttttcaataaaaaa 23320122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 26486439 - 26486487
Alignment:
Q  55 aacttgtgttttttaaattaaatatgtagtttt-taataaataattgtt 102  Q
    ||||||||| ||||| ||||||||| ||||||| |||||||||||||||    
T  26486439 aacttgtgtattttatattaaatatatagttttttaataaataattgtt 26486487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42180222 - 42180162
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||| ||||||||||||| ||||||||||||| ||  || ||||  |||||||||||    
T  42180222 atcatgtgtaaatttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgt 42180162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 39150335 - 39150492
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||    
T  39150335 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaacttttaataaataattg 39150434  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||||||| |||  |||||||||||||||||||  ||||||||||||||    
T  39150435 ttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcaca 39150492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 17919623 - 17919466
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||    
T  17919623 atcatgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaacttttaataaataattg 17919524  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 156  Q
    ||||||||||||||||| |||  |||||||||||||||||||||  ||||||||||||    
T  17919523 ttggttttcaatgaaaagttactacttttagttgccttaacatgtacaatattgcaca 17919466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 313919 - 313762
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  313919 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattg 313820  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||| ||||||||  |||||||||| ||||||||  ||||||||||||||    
T  313819 ttggttttcaatcaaaaattactacttttagttaccttaacatgtgcaatattgcaca 313762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 6569993 - 6570109
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  6569993 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattg 6570092  T
Q  101 ttggttttcaatgaaaa 117  Q
    |||||||||||||||||    
T  6570093 ttggttttcaatgaaaa 6570109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 39930812 - 39930941
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| |||| |||||||||||||||||||||||| ||     
T  39930812 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttgaaacttgtattttttatattatatatgtagtttttaataaataattattt 39930911  T
Q  104 gttttcaatgaaaaattatcacttttagtt 133  Q
    ||||||||||||||||||  ||||||||||    
T  39930912 gttttcaatgaaaaattactacttttagtt 39930941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 30288872 - 30288992
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||||||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  30288872 atcatgtgcaaatttacacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattg 30288971  T
Q  101 ttggttttcaatgaaaaatta 121  Q
    |||||||||||||||||||||    
T  30288972 ttggttttcaatgaaaaatta 30288992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 6754641 - 6754484
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||| |||||||||| |||||    
T  6754641 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaatt 6754542  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| |||  | |||||||||||||||||  ||||||||||||||    
T  6754541 gttgg-tttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcaca 6754484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 44918194 - 44918037
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||||||||||| |||||| |||||| ||||||||||||||||| | ||||||||| ||||||||| ||||||||||||| ||||||| ||||||||    
T  44918194 atcatgtgcaaatttacacatgttaagaaatttaaagtagtaactttaatttggaacttatgttttttatattaaatatgtagcttttaatcaataattg 44918095  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||| |||||||| |||| |||  |||||||||| ||||||||  ||||||||||||||    
T  44918094 ttgattttcaataaaaatttactacttttagttaccttaacatgtgcaatattgcaca 44918037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 30363003 - 30363147
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataatt 99  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||  ||||| |||||||||||| ||||||||||| |||||    
T  30363003 atcatgtgcaaatttgcacatgataacaaatttaaaatagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttttaataattaatt 30363102  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||||||||||||| |||| |||  | ||||||| |||||||||||    
T  30363103 gttggttttcaataaaaagttactatttttagtagccttaacatg 30363147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 41624999 - 41624842
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||| |||||||||| |||||    
T  41624999 atcatgtgcaaatttgcatatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaatt 41624900  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| |||  | |||||||||| ||||||  ||||||||||||||    
T  41624899 gttgg-tttcaataaaaagttactatttttagttgctttaacatgtgcaatattgcaca 41624842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 8062370 - 8062217
Alignment:
Q  5 tgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttgg 104  Q
    |||||||||||||||||| ||| |||||||||||||||||||| | ||| || || ||||||||| ||||||||| ||||||||||| |||||||||||     
T  8062370 tgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaatttgaaatttatgttttttatattaaatatatagtttttaatcaataattgttga 8062271  T
Q  105 ttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 156  Q
    ||||||||||||| |||  |||||||||| ||||||||||  ||||||||||||    
T  8062270 ttttcaatgaaaagttactacttttagttaccttaacatgttcaatattgcaca 8062217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 30172049 - 30171905
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |    
T  30172049 atcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagt 30171950  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||| |||||||| ||||||||  |||||||| || |||||||||    
T  30171949 tttgtttttcaataaaaaattactacttttagatgtcttaacatg 30171905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 30187590 - 30187446
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |    
T  30187590 atcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagt 30187491  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||| |||||||| ||||||||  |||||||| || |||||||||    
T  30187490 tttgtttttcaataaaaaattactacttttagatgtcttaacatg 30187446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 52833491 - 52833600
Alignment:
Q  12 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaa 111  Q
    ||||||||||||||||||||||||| |||||| ||||||||| || ||||| |||||| | ||||||||||| |||||||||||||||||| ||||||||    
T  52833491 atttgcacatgataagaagtttaaaatagtaattttgacttgaaatttgtgatttttataataaatatgtagcttttaataaataattgtttgttttcaa 52833590  T
Q  112 tgaaaaatta 121  Q
    ||||||||||    
T  52833591 tgaaaaatta 52833600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 32716195 - 32716328
Alignment:
Q  25 aagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatca 124  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||   |||||| |||||||||| |||||||| ||||| |||       
T  32716195 aagaagtttaaagtagtaattttgattaggaacttgtgttttttatattaaatatgtaacatttaatcaataattgtttgttttcaacgaaaagttactt 32716294  T
Q  125 cttttagttgccttaaca--tgcaatattgcaca 156  Q
    | ||||||| ||||||||  ||||||||||||||    
T  32716295 catttagttaccttaacatgtgcaatattgcaca 32716328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 34802137 - 34801994
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||| | |||| |||| | |||||||||||  ||| | ||||||||||||| |||||||||||||| |    
T  34802137 atcatgtgcaaatttgcacatgttaagaagtttaaaatggtaattttgtc-tggaacttgtgcatttcatattaaatatgtagttttttaataaataagt 34802039  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||| |||||||| ||||||||  |||||||| |  |||||||||    
T  34802038 tttgtttttcaataaaaaattactacttttagatatcttaacatg 34801994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 36490949 - 36490805
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||||||  |||||||||||   ||||  ||| ||||| | | ||||||||||||||||    
T  36490949 atcatgagcaaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaatatataactttttaataaataatt 36490850  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||| |||||||| |||| |||  ||||||| |||| ||||||||    
T  36490849 gttgtttttcaataaaaacttactacttttaattgctttaacatg 36490805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10896523 - 10896446
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaata 78  Q
    |||||||| ||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  10896523 atcatgtgtaaaattgcacatgttaagaagtttaaagtagtaactttaactttgaacttgtgttttttatattaaata 10896446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 21854139 - 21854271
Alignment:
Q  15 tgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataattgttggttttcaatg 113  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||||   ||||| |||||||| |||  |||| ||||||||| ||||| ||||||||     
T  21854139 tgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtacattttatattaaataggtatcttttaaataaataaatgttgtttttcaatt 21854238  T
Q  114 aaaaattatcacttttagttgccttaacatgca 146  Q
    ||||||||  |||||||| |  |||||||||||    
T  21854239 aaaaattactacttttagatatcttaacatgca 21854271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 22167505 - 22167361
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt-aataaataatt 99  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||   ||| | |||||||||  | ||||| |||||||||||    
T  22167505 atcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatataaattttttgaataaataatt 22167406  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||| |||||||  |||| |||  ||| |||||||  ||||||||    
T  22167405 gttgtttttcaagaaaaagttactactattagttgttttaacatg 22167361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 31100952 - 31101058
Alignment:
Q  12 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttca 110  Q
    ||||||||||  |||||| |||||||| |||||||||||||  ||||||||  ||||| ||||||||||| | |||||||||||||| ||||| ||||||    
T  31100952 atttgcacatattaagaaatttaaagtggtaactttgacttaaaacttgtgcattttatattaaatatgttgctttttaataaataagtgttgtttttca 31101051  T
Q  111 atgaaaa 117  Q
    |||||||    
T  31101052 atgaaaa 31101058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 44007547 - 44007612
Alignment:
Q  10 aaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaa 75  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  44007547 aaatttgcacatgttaagaagtttaaagtagcaactttaacttggaacttgtgttttttatattaa 44007612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 6307672 - 6307561
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaa-atatgtagtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||||||||||||| ||  ||||| ||||||||||||| ||||  ||||| ||||  | ||||||||||||||||    
T  6307672 atcatgtgcaaatttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtgtattttctattaatatat-aaatttttaataaataatt 6307574  T
Q  100 gttggttttcaat 112  Q
    |||| ||| ||||    
T  6307573 gttgttttccaat 6307561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9516751 - 9516634
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||| ||||||||||||| |||||| |||||| | |||| |||  |||  ||||||||| ||||| ||||||||| | | ||||||||||||||||    
T  9516751 atcatgtgtaaatttgcacatgttaagaaatttaaaatggtaagtttctcttataacttgtgtattttatattaaatatataactttttaataaataatt 9516652  T
Q  100 gttggttttcaatgaaaa 117  Q
    | || |||||||||||||    
T  9516651 ggtgtttttcaatgaaaa 9516634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 23576422 - 23576577
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  ||| ||||||    ||||  ||||||||| | | |||||  |||||||||    
T  23576422 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtattaaatatataactttttgttaaataatt 23576521  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgca 154  Q
    ||||| ||||||| |||| || | |||||||||| ||||||||  ||||||||||||    
T  23576522 gttgg-tttcaataaaaacttgttacttttagttaccttaacatgtgcaatattgca 23576577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 3096376 - 3096292
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 88  Q
    ||||||||||||||||||||||| || ||||||||| ||| ||| ||||  ||||| ||||||||| ||||||||||||| ||||    
T  3096376 atgtgcaaatttgcacatgataaaaaatttaaagtaataattttaacttaaaacttatgttttttatattaaatatgtagatttt 3096292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 23591868 - 23591724
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| ||| || ||  |||||||  |||||||||||   ||||  ||||||||| ||  ||||||||||||||||    
T  23591868 atcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaatatataactttttaataaataatt 23591769  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||| |||||||| |||| |||  | |||||||||| ||||||||    
T  23591768 attgattttcaataaaaacttactaattttagttgctttaacatg 23591724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 1502728 - 1502885
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  |||||| |||    ||||  ||||||||| | | |||||  |||||||||    
T  1502728 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatatataactttttgttaaataatt 1502827  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||| ||||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  1502828 gtt-gttttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcaca 1502885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12947562 - 12947649
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 88  Q
    ||||||||| ||||| || ||| ||||||||||||| |||||||||||||||  ||||||||  ||||| |||||||| |||||||||    
T  12947562 atcatgtgcgaatttacatatggtaagaagtttaaattagtaactttgacttaaaacttgtgcattttatattaaataggtagttttt 12947649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 21391924 - 21391994
Alignment:
Q  18 acatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 88  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||||| ||||| || |||||| ||||||||    
T  21391924 acatgttaagaagtttaaagtagtaactttggcttagaacttgtgtattttatataaaatatttagttttt 21391994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 51382450 - 51382384
Alignment:
Q  92 aaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||||||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  51382450 aaataattgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 51382384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13241927 - 13241810
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||| ||||||||||||| |||||| |||||| | |||| |||| | || ||||||||| ||| | ||||||||| | | ||||||||||||||||    
T  13241927 atcatgtgaaaatttgcacatgttaagaaatttaaaatggtaagtttgtcgtgtaacttgtgtatttcatattaaatatataattttttaataaataatt 13241828  T
Q  100 gttggttttcaatgaaaa 117  Q
      || ||||||| |||||    
T  13241827 tgtgtttttcaacgaaaa 13241810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25465328 - 25465267
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtg 62  Q
    |||||||||||||||||||||| ||||||||| ||| |||||| ||||  ||||||||||||    
T  25465328 atcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattggaacttgtg 25465267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35438885 - 35438768
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| | |||| |||  |||  || |||||| ||||| ||||||||| | | ||||||||||| ||||    
T  35438885 atcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttatcttataatttgtgtattttatattaaatatataactttttaataaacaatt 35438786  T
Q  100 gttggttttcaatgaaaa 117  Q
    | || |||||||| ||||    
T  35438785 ggtgtttttcaattaaaa 35438768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 5057166 - 5057077
Alignment:
Q  7 tgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaat 95  Q
    |||||||||||| ||| | | ||||||||||| |||||||||||||| |||||||   ||||| ||||||||| ||  ||||||||||||    
T  5057166 tgcaaatttgcaaatgttcaaaagtttaaagtggtaactttgacttgaaacttgtacattttatattaaatatatatctttttaataaat 5057077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6180356 - 6180296
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||||||||||||||||| ||||||||||||| ||| || |||   |||||||||||    
T  6180356 atcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgt 6180296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 42589340 - 42589264
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  42589340 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 42589264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 44013093 - 44013017
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  44013093 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 44013017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 5875223 - 5875258
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaa 36  Q
    |||||||||||||||||||||| |||||||||||||    
T  5875223 atcatgtgcaaatttgcacatgttaagaagtttaaa 5875258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33673743 - 33673830
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt 88  Q
    ||||||| ||||||| |||| | ||||||||||||| || | |||||  ||| |||||||||  ||||| |||||| |||||||||||    
T  33673743 atcatgttcaaatttacacacgctaagaagtttaaaataattactttttcttagaacttgtgcattttatattaaacatgtagttttt 33673830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 35512895 - 35512860
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaa 36  Q
    |||||||||||||||||||||| |||||||||||||    
T  35512895 atcatgtgcaaatttgcacatgttaagaagtttaaa 35512860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 32543058 - 32543176
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataatt 99  Q
    ||||| |||||||||||||||| ||||||||| ||  |||||| ||||  || ||| |||||  | ||| |||||||||  |  ||||||||||||||||    
T  32543058 atcatatgcaaatttgcacatgttaagaagttcaagttagtaagtttgtattagaatttgtgcgtattatattaaatatactgttttttaataaataatt 32543157  T
Q  100 gttggttttcaatgaaaaa 118  Q
    ||||  ||||||| |||||    
T  32543158 gttgtctttcaataaaaaa 32543176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 52337924 - 52337834
Alignment:
Q  13 tttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgtt 102  Q
    |||| ||||| ||||||||||||| |||||| | ||  ||| ||||| ||| ||||| ||||||||| | | |||||||||||||||||||    
T  52337924 tttgaacatgttaagaagtttaaaatagtaaatatgcattgcaacttatgtattttatattaaatatataaatttttaataaataattgtt 52337834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 6520817 - 6520749
Alignment:
Q  65 ttttaaattaaatatgtagttttt-aataaataattgttggttttcaatgaaaaattatcacttttagtt 133  Q
    ||||||||||||||| || ||||| ||||||||||||||| ||||||| ||||| || | ||||||||||    
T  6520817 ttttaaattaaatatttaattttttaataaataattgttgtttttcaa-gaaaagttgttacttttagtt 6520749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 4249374 - 4249298
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||| ||||||| ||| |||||||||||  ||| |||   ||| ||||||||| ||||| |||||||||    
T  4249374 catgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatat 4249298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 4249698 - 4249622
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||| ||||||| ||| |||||||||||  ||| |||   ||| ||||||||| ||||| |||||||||    
T  4249698 catgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatat 4249622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 4250022 - 4249946
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||| ||||||| ||| |||||||||||  ||| |||   ||| ||||||||| ||||| |||||||||    
T  4250022 catgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatat 4249946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 9662064 - 9661988
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| || || |||||||||    
T  9662064 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattctacattaaatat 9661988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13322046 - 13321986
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||||||||||||| ||| ||||||||||||| ||| || ||||  |||||| ||||    
T  13322046 atcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtattggaatttgt 13321986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 39627603 - 39627723
Alignment:
Q  25 aagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgttggttttcaatgaaaaattatc 123  Q
    |||||||| ||| |||||| ||||  ||| ||||||||  ||||| ||||||||||| | |||| ||||| | ||||||| |||||||| |||| ||       
T  39627603 aagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataagtgattgttgtttttcaattaaaagttgct 39627702  T
Q  124 acttttagttgccttaacatg 144  Q
    | |||||||| ||||||||||    
T  39627703 atttttagtttccttaacatg 39627723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 52787 - 52944
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| ||||||||    
T  52787 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaataattg 52886  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  52887 ttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 52944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 145847 - 145690
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| ||||||||    
T  145847 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaataattg 145748  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  145747 ttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 145690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 2e-53; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 10129273 - 10129116
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  10129273 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattg 10129174  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||||||||||||  | |||||||| ||||||||  ||||||||||||||    
T  10129173 ttggttttcaatgaaaaattactaattttagttaccttaacatgtgcaatattgcaca 10129116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 7140467 - 7140624
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  7140467 atcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagtttttaatcaataattg 7140566  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||| |||| |||  |||||||||| ||||||||  ||||||||||||||    
T  7140567 ttggttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcaca 7140624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 13327949 - 13328106
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||   |||||| ||||||||    
T  13327949 atcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaacatttaatcaataattg 13328048  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 156  Q
    ||||||||||||||||| |||  |||||||||| |||||||  |||||||||||||||    
T  13328049 ttggttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcaca 13328106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 9744013 - 9743874
Alignment:
Q  19 catgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  |||||||||||||||||||||||||||| |||||    
T  9744013 catgataagaagtttaaagtagtaactttgacttggaacttatgttttttatattaaatatgtaacttttaataaataattgttggttttcaataaaaaa 9743914  T
Q  119 ttatcacttttagttgccttaacatg--caatattgcaca 156  Q
    |||  ||||||||||| |||||||||  ||||||||||||    
T  9743913 ttactacttttagttgtcttaacatgcacaatattgcaca 9743874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 35678283 - 35678440
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||| ||||||||||| | |||||||||| |||||    
T  35678283 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtg-tatttatattaaatatgtaaatttttaataattaatt 35678381  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||||||||| |||  |||||||||| | ||||||  ||||||||||||||    
T  35678382 gttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcaca 35678440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 39701811 - 39701968
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||| || |||||||||||| ||||||||||||  ||||||| | ||||||    
T  39701811 atcatgtgcaaatttgcacatgttaacaagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtaacttttaattagtaattg 39701910  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||| ||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  39701911 ttggttttcaacgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 39701968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 18567424 - 18567553
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||   |||||| ||||||||    
T  18567424 atcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacatgtgttttttatattaaatatgtaacatttaatcaataattg 18567523  T
Q  101 ttggttttcaatgaaaaattatcactttta 130  Q
    ||||||||||||||||| ||| ||||||||    
T  18567524 ttggttttcaatgaaaagttaccactttta 18567553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 39024865 - 39025002
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||| ||||| ||||||| |||||||||| |||||    
T  39024865 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgcattttatattaactatgtagatttttaataattaatt 39024964  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgcctt 138  Q
    ||||| ||||||| |||| |||| |||||||||||||||    
T  39024965 gttgg-tttcaataaaaagttattacttttagttgcctt 39025002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 156
Target Start/End: Original strand, 40210835 - 40210986
Alignment:
Q  7 tgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggtt 106  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||   |||||| ||||||||||||||    
T  40210835 tgcaaatttgcacatgttaagacgtttaaattagtaactttgactttgaatttgtgttttttatattaaatatgtaacatttaatcaataattgttggtt 40210934  T
Q  107 ttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 156  Q
    ||||||||||| |||  |||||||||| |||||||  |||||||||||||||    
T  40210935 ttcaatgaaaagttaatacttttagttaccttaacatatgcaatattgcaca 40210986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 8140727 - 8140594
Alignment:
Q  11 aatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttca 110  Q
    |||||||||||| ||||||| |||||||| ||| ||||||||  || || ||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  8140727 aatttgcacatgttaagaagattaaagtaataattttgacttaaaatttatgttttttatattaaatatgtagcttttaataaataattgttggttttca 8140628  T
Q  111 atgaaaaattatcacttttagttgccttaacatg 144  Q
    ||||||||| |  |||||||||||||||||||||    
T  8140627 atgaaaaatcactacttttagttgccttaacatg 8140594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 26682238 - 26682080
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||  ||||| ||||||| ||||| ||||||||||||||||    
T  26682238 atcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatgtgtagctttttaataaataatt 26682139  T
Q  100 gttggttttcaat-gaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||| |||||||||  ||||||||  |||||||||||  ||||||  ||||||||||||||    
T  26682138 gtt-gttttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcaca 26682080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 14816134 - 14816291
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| | |||| ||||||||||| | |||||||||| |||||    
T  14816134 atcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtg-tatttatattaaatatgtaaatttttaataattaatt 14816232  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||| |||| |||  |||||||||| | ||||||  ||||||||||||||    
T  14816233 gttggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcaca 14816291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 14829606 - 14829449
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| | |||| ||||||||||| | |||||||||| |||||    
T  14829606 atcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtg-tatttatattaaatatgtaaatttttaataattaatt 14829508  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||| |||| |||  |||||||||| | ||||||  ||||||||||||||    
T  14829507 gttggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcaca 14829449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 19343844 - 19344002
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaa-attaaatatgtagtttttaataaataatt 99  Q
    |||||||||||||||||||||| ||| | |||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||  ||||| | |||||||    
T  19343844 atcatgtgcaaatttgcacatgttaacacgtttaaagtagtaattttgacttgaaacttgtattttttaatattaaatatgtaacttttactcaataatt 19343943  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||||||||| |||  |||||| ||| ||||||||  ||||||||||||||    
T  19343944 gttggttttcaatgaaaagttactacttttggttaccttaacatgtgcaatattgcaca 19344002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 9801838 - 9801681
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||| ||  ||||||| ||||||||    
T  9801838 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttgaaacttatgtttgttatattaaatatataacttttaatcaataattg 9801739  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 156  Q
    ||| ||||||||||||| |||  ||||||| || | |||| |||  ||||||||||||    
T  9801738 ttgattttcaatgaaaagttactacttttaattactttaatatgtacaatattgcaca 9801681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 38527975 - 38527833
Alignment:
Q  20 atgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataa----ataattgttggttttcaatgaa 115  Q
    |||||||||||||||||||| ||| ||||| |||||| |||||||||||| ||||||||||||| |||||||||    ||||| ||||||||||||||||    
T  38527975 atgataagaagtttaaagtaataattttgatttggaatttgtgttttttatattaaatatgtagcttttaataaataaataatcgttggttttcaatgaa 38527876  T
Q  116 aaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    || |||| |||||||||||||||||||  ||||||||||||||    
T  38527875 aagttattacttttagttgccttaacatgtgcaatattgcaca 38527833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 4080402 - 4080545
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||   |||| ||||||||||| | |||||| ||| |||||    
T  4080402 atcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaatt 4080500  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||| |||||||||||||| |||  ||||||| || ||||||||||    
T  4080501 gttagttttcaatgaaaagttactacttttactttccttaacatg 4080545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 4084551 - 4084694
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||   |||| ||||||||||| | |||||| ||| |||||    
T  4084551 atcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttatg-catttatattaaatatgtaaatttttagtaattaatt 4084649  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||| |||||||||||||| |||  ||||||| || ||||||||||    
T  4084650 gttagttttcaatgaaaagttactacttttactttccttaacatg 4084694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 4102858 - 4103001
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||   |||| ||||||||||| | |||||| ||| |||||    
T  4102858 atcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttttg-catttatattaaatatgtaaatttttagtaattaatt 4102956  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||| |||||||||||||| |||  ||||||| || ||||||||||    
T  4102957 gttagttttcaatgaaaagttactacttttactttccttaacatg 4103001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 45519578 - 45519658
Alignment:
Q  9 caaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttta 89  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  45519578 caaatttgcacatgataagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagctttta 45519658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 8284576 - 8284721
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag--tttttaataaataat 98  Q
    |||||||||||||||| ||||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| |||||||| || |  |||||||||||||||    
T  8284576 atcatgtgcaaatttgtacatgttaagaagtttaaattagcaacttcgacttggaacttgtgtattttatattaaataggtggtctttttaataaataat 8284675  T
Q  99 tgttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||||  |||| ||| |||| |||  |||||||||||| ||||||||    
T  8284676 tgttcttttttaataaaaagttactacttttagttgctttaacatg 8284721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1203771 - 1203655
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |   ||||||||||||||| ||||||||||||    ||||| |||||||     
T  1203771 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaattttgattaaaaacttgtgttttttatattaaatatgtaacagttaattaataatta 1203672  T
Q  101 ttggttttcaatgaaaa 117  Q
    || ||||||||||||||    
T  1203671 tttgttttcaatgaaaa 1203655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 44091488 - 44091346
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||| ||||||||| ||| |||||| ||||||||||||||||||| || |||||||||  ||||| ||||||| ||||| ||||||||||||||||    
T  44091488 atcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaataatt 44091389  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
    ||| ||||||||| ||||||||  |||||| ||||  |||||||    
T  44091388 gtt-gttttcaataaaaaattaatacttttcgttgttttaacat 44091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 31812283 - 31812139
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||  ||||||||||||| | |||| ||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |    
T  31812283 atcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagt 31812184  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||  |||||||| ||||||||  |||||||| |  |||||||||    
T  31812183 tttatttttcaataaaaaattactacttttagatatcttaacatg 31812139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 26834731 - 26834600
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||| ||  |||||| |||||| | |||| ||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |    
T  26834731 atcatgtgcaaatttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagt 26834632  T
Q  100 gttggttttcaatgaaaaattatcacttttag 131  Q
     ||| |||||||| ||||||||  ||||||||    
T  26834631 tttgtttttcaataaaaaattactacttttag 26834600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 14961671 - 14961771
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||| |||||| ||||  ||||||||||||  ||||||||||||||| | | |||||||||||| |||    
T  14961671 atcatgtgcaaatttgcacatgctaagaagtttaaaatagtaattttgtattggaacttgtgcattttaaattaaatatttaactttttaataaatgatt 14961770  T
Q  100 g 100  Q
    |    
T  14961771 g 14961771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 2161557 - 2161400
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    |||| |||||||||| | | |||||  |||||||||    
T  2161557 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgaattaaatatataactttttgttaaataatt 2161458  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  2161457 gttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 2161400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 12189596 - 12189740
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt-aataaataatt 99  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||   |||||||||||   ||| | |||||||||  | ||||| |||||||||||    
T  12189596 atcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatataaattttttgaataaataatt 12189695  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||| |||||||  |||| |||  ||| |||||||  ||||||||    
T  12189696 gttgtttttcaagaaaaagttaatactcttagttgttttaacatg 12189740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 12434024 - 12434168
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt-aataaataatt 99  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||   |||||||||||   ||| | |||||||||  | ||||| |||||||||||    
T  12434024 atcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatataaattttttgaataaataatt 12434123  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||| |||||||  |||| |||  ||| |||||||  ||||||||    
T  12434124 gttgtttttcaagaaaaagttaatactcttagttgttttaacatg 12434168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 7393253 - 7393370
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||| |||||||||||| ||| || |||||| |||||| |||| |||| ||||||||| ||||| ||||||||| | | ||||||||||||||||    
T  7393253 atcatgtgcgaatttgcacatgttaaaaaatttaaaatagtaa-tttgtcttgtaacttgtgtattttatattaaatatataactttttaataaataatt 7393351  T
Q  100 gttggttttcaatgaaaaa 118  Q
    | || ||||||| ||||||    
T  7393352 ggtgtttttcaacgaaaaa 7393370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 31451485 - 31451420
Alignment:
Q  10 aaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaa 75  Q
    |||||||||| || |||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  31451485 aaatttgcacgtgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaa 31451420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 3306063 - 3306220
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  ||| ||||||    ||||  || |||||| | | |||||  |||||||||    
T  3306063 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtatcaaatatataactttttgttaaataatt 3306162  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| |||  |||||||||| ||||||||  ||||||||||||||    
T  3306163 gttgg-tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcaca 3306220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 12132153 - 12132009
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||| |||||| ||||||||| |||||| ||||||||||||| ||||  ||||||||||    ||||| ||||||||| | | ||||||||||||| ||    
T  12132153 atcatctgcaaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatatataactttttaataaatactt 12132054  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    || | |||||||| |||| ||   |||||||||| | ||||||||    
T  12132053 gtggtttttcaataaaaagttgctacttttagtttctttaacatg 12132009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 20514803 - 20514659
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||| ||||||||| | |||||| |||||| | |||| |||| ||||||||||||   ||||| ||||||||| | | ||||||||||||||||    
T  20514803 atcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatatataactttttaataaataatt 20514704  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    | |  |||||||| | ||||||  ||||| |||||| ||| ||||    
T  20514703 ggtatttttcaataagaaattactactttaagttgctttaccatg 20514659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 6818187 - 6818044
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataatt 99  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||  |||  | ||||||||||  ||||| ||||| |||   | ||||||||||||||||    
T  6818187 atcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaataaataatt 6818088  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
    |||  ||||||||| ||| |||  | |||||||| | |||||||    
T  6818087 gttctttttcaatgtaaagttactatttttagttcctttaacat 6818044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 34249809 - 34249703
Alignment:
Q  40 gtaactttgacttggaacttgtgttttttaaattaaatatgtag--tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgcct 137  Q
    |||| |||| |||||||||||||| ||||| ||||||||| ||   ||||||||||||||||  || |||||||||||||||||  |||||||| || ||    
T  34249809 gtaagtttgtcttggaacttgtgtattttatattaaatatttaacttttttaataaataattagtgtttttcaatgaaaaattaatacttttagctgtct 34249710  T
Q  138 taacatg 144  Q
    || ||||    
T  34249709 tatcatg 34249703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28014866 - 28014926
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  28014866 atcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 28014926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 43717560 - 43717704
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataatt 99  Q
    ||||||||||||||| |||||| |||||| || |||  ||||| ||||| | ||||||||||  |||   ||||||||||||   |||||||| ||| ||    
T  43717560 atcatgtgcaaatttacacatgttaagaatttcaaaaaagtaagtttgaatgggaacttgtgcatttagtattaaatatgtatcattttaatagatactt 43717659  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||| ||||| || |||| |  |||||||||||||| ||||||||    
T  43717660 gttgtttttccataaaaagtgttcacttttagttgctttaacatg 43717704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26363998 - 26364057
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttg 60  Q
    ||||||||||||||||| |||| |||||| |||||| |||||||||||  ||||||||||    
T  26363998 atcatgtgcaaatttgcgcatgttaagaaatttaaaatagtaactttgcattggaacttg 26364057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29642773 - 29642706
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttt 68  Q
    |||||||||||||||||| |||||||| | |||||| | |||| |||| |||| ||||||||||||||    
T  29642773 atcatgtgcaaatttgcatatgataaggaatttaaaatggtaagtttgtcttgaaacttgtgtttttt 29642706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36967078 - 36967125
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttg 48  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  36967078 atcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttg 36967125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45518122 - 45518071
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgactt 52  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||| ||||    
T  45518122 atcatgtgcaaatttgtacataataagaagtttaaactagtaactttaactt 45518071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 15198908 - 15198986
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||||| ||| || ||| || |||||||||||  ||| ||||||| | |||| ||||||||||    
T  15198908 atcatgtgcaaatttgcacatgttaaaaaattttaaatagtaactttgcattgtaacttgtatattttgaattaaatat 15198986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 35740948 - 35741018
Alignment:
Q  12 atttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta 82  Q
    ||||||||||||||| || ||||| ||||||| |||||||   || |||||||||||| ||||||||||||    
T  35740948 atttgcacatgataaaaattttaatgtagtaattttgactaaaaatttgtgttttttatattaaatatgta 35741018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 38047949 - 38048062
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataattgtt 102  Q
    ||||||||||||||||||| |||| | |||||| | ||||||||| ||||||| |||||| |||||  ||||||||  |  ||||||||||||||||| |    
T  38047949 atgtgcaaatttgcacatgttaagtaatttaaa-tggtaactttgtcttggaatttgtgtattttatcttaaatatacatttttttaataaataattggt 38048047  T
Q  103 ggttttcaatgaaaa 117  Q
    | || | ||||||||    
T  38048048 gtttgtgaatgaaaa 38048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 34405085 - 34405130
Alignment:
Q  12 atttgcacatgataagaagtttaaagtagtaactttgacttggaac 57  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||||    
T  34405085 atttgcacatgttaagaagtttaaagtaataactttaacttggaac 34405130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 10543639 - 10543715
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  10543639 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 10543715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13496717 - 13496757
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagt 41  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  13496717 atcatgtgcaaatttgcacatgttaagaagtttaaaatagt 13496757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27874689 - 27874749
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||||||||||||||||| ||||||||||||| ||  || ||||  |||||||||||    
T  27874689 atcatgtgcaaatttgcacatgttaagaagtttaaaatacaaattttgtattggaacttgt 27874749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 39703561 - 39703466
Alignment:
Q  63 ttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||| ||||||||||||  ||||||    |||||||||||||| || ||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  39703561 ttttttatattaaatatgtaacttttaacccgtaattgttggtttttaacgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 39703466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 45516387 - 45516316
Alignment:
Q  71 attaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
    ||||||||||||| |||||||||||||||||| | ||||||| |||| |||  ||||||||||  ||||||||    
T  45516387 attaaatatgtagcttttaataaataattgttag-tttcaataaaaagttactacttttagttatcttaacat 45516316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 22838395 - 22838360
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaa 36  Q
    |||||||||||||||||||||| |||||||||||||    
T  22838395 atcatgtgcaaatttgcacatgttaagaagtttaaa 22838360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 38212952 - 38212987
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaa 36  Q
    |||||||||||||||||||||| |||||||||||||    
T  38212952 atcatgtgcaaatttgcacatgttaagaagtttaaa 38212987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 297258 - 297205
Alignment:
Q  8 gcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    ||||||||||||||| ||||||||||||| || ||||||||  ||| |||||||    
T  297258 gcaaatttgcacatgttaagaagtttaaaataataactttgtattgaaacttgt 297205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 35745982 - 35746054
Alignment:
Q  86 tttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||| |||||||||| |||||||||||||| ||||  ||||||||| | ||||||  | ||||||||||||    
T  35745982 tttaattaataattgtttgttttcaatgaaaagttatttcttttagttactttaacaatttcaatattgcaca 35746054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 40225995 - 40226028
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagttta 34  Q
    |||||||||||||||||||||| |||||||||||    
T  40225995 atcatgtgcaaatttgcacatgttaagaagttta 40226028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9580117 - 9580177
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    ||||||||||||||| |||||| ||||||||||||| ||| || ||||  ||| |||||||    
T  9580117 atcatgtgcaaatttacacatgttaagaagtttaaaatagaaattttgtattgaaacttgt 9580177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 16586732 - 16586808
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| || || |||||||||    
T  16586732 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattgtacattaaatat 16586808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 2e-53; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 2795693 - 2795536
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| ||||||||    
T  2795693 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaataattg 2795594  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||||||| |||  |||||||||| ||||||||  ||||||||||||||    
T  2795593 ttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcaca 2795536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 4047582 - 4047440
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| || |||||    
T  4047582 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaacaattg 4047483  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
    ||||||||||||||||| |||  |||||||||| |||||||||    
T  4047482 ttggttttcaatgaaaagttactacttttagttaccttaacat 4047440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 9184363 - 9184234
Alignment:
Q  15 tgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatga 114  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||    
T  9184363 tgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagtttttaatcaataattattggttttcaatga 9184264  T
Q  115 aaaattatcacttttagttgccttaacatg 144  Q
    ||| |||  |||||||||| ||||||||||    
T  9184263 aaagttactacttttagttaccttaacatg 9184234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 30328345 - 30328492
Alignment:
Q  11 aatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttca 110  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| |    
T  30328345 aatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgttggttttta 30328444  T
Q  111 atgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||| |  ||||||||||  |||||||  ||||||||||||||    
T  30328445 atgaaaaatgactacttttagttatcttaacatgtgcaatattgcaca 30328492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 8103588 - 8103745
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||| |||||||||| |||||    
T  8103588 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaatt 8103687  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| |||  | |||||||||||||||||  ||||||||||||||    
T  8103688 gttgg-tttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcaca 8103745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 12642004 - 12642158
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttg 103  Q
    ||||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||||||||||| ||||||||||||   |||||   ||||||||||    
T  12642004 atgtgcaaatttgcacatgttaagaagtttaaattaataactttgatttggaacttgtgttttttatattaaatatgtaacatttaaacgataattgttg 12642103  T
Q  104 gttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgcaca 156  Q
    ||||||||||||||||||  |||||||||||||||||||||  ||||||||||||    
T  12642104 gttttcaatgaaaaattactacttttagttgccttaacatgtacaatattgcaca 12642158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 6 - 144
Target Start/End: Complemental strand, 28630043 - 28629905
Alignment:
Q  6 gtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggt 105  Q
    |||||||||||||||||||||||||||||||||| || |||| |||||  |||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  28630043 gtgcaaatttgcacatgataagaagtttaaagtaatatctttaacttgagacttgtgttttttatattaaatatgtaacttttaataaataattgttggt 28629944  T
Q  106 tttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||||||||||| |||| | |||||||||| ||||||||    
T  28629943 tttcaatgaaaagttattatttttagttgctttaacatg 28629905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11636901 - 11636744
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||| ||||||||||| | |||||||||| |||||    
T  11636901 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttaataattaatt 11636803  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||||||||| |||  |||||||||| | ||||||  ||||||||||||||    
T  11636802 gttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcaca 11636744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 34578181 - 34578038
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||| ||||  ||||||| ||||||| ||||||||||||| ||||||| || |||||    
T  34578181 atcatgtgcaaatttgcacatgttaaaaagtttaaaatagtaactttaacttaaaacttgtattttttatattaaatatgtagcttttaatcaacaattg 34578082  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||| |||||||||||||||||| |||||||||| ||||||||||    
T  34578081 ttgattttcaatgaaaaattattacttttagttaccttaacatg 34578038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 41350372 - 41350252
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||  ||||||||||||||||    
T  41350372 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttggaacttgtgctttttatattaaatatgtaacttttaataaataattg 41350273  T
Q  101 ttggttttcaatgaaaaatta 121  Q
    ||| |||||| || |||||||    
T  41350272 ttgattttcagtgcaaaatta 41350252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11376130 - 11375972
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaactt-gtgttttttaaattaaatatgtagtttttaataaataatt 99  Q
    |||||||| ||||||  ||||||||| |||||||||||||||||||||||||| || || |||||||||| ||||||||||||| |||||||||||||||    
T  11376130 atcatgtgtaaatttatacatgataaaaagtttaaagtagtaactttgacttgaaattttgtgttttttatattaaatatgtagcttttaataaataatt 11376031  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
     ||| ||||||||||||| |||  |||||||||||| ||||||  ||||||||||||||    
T  11376030 attgattttcaatgaaaagttactacttttagttgctttaacatgtgcaatattgcaca 11375972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 15191043 - 15190885
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtt-ttttaaattaaatatgtagtttttaataaataatt 99  Q
    |||||||  ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||  ||||||| |||||||    
T  15191043 atcatgtataaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaacttgtgtttttttatattaaatatgtaacttttaatcaataatt 15190944  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 156  Q
    ||| ||||||||||||||||||  ||||||| || |||||||  |||||||||||||||    
T  15190943 gtttgttttcaatgaaaaattactacttttacttaccttaacatatgcaatattgcaca 15190885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 31365958 - 31366075
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||   |||||| ||||||||    
T  31365958 atcatgtgcaaatttgtacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatttaatcaataattg 31366057  T
Q  101 ttggttttcaatgaaaaa 118  Q
    |||||||||||| |||||    
T  31366058 ttggttttcaataaaaaa 31366075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 16174630 - 16174762
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||||   |||| ||||||||||| |||||||||||| |||||    
T  16174630 atcatttgcaaatttgcacatcataagaaatttaaagtagtaactttgaattgaaacttgtg-catttatattaaatatgtaagtttttaataattaatt 16174728  T
Q  100 gttggttttcaatgaaaaattatcacttttagtt 133  Q
    |||||||||||||||||| |||  ||||||||||    
T  16174729 gttggttttcaatgaaaagttactacttttagtt 16174762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 14466502 - 14466598
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataa 97  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||| |||||    
T  14466502 atcatgtgcaaatttagacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagcttttaatcaataa 14466598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 24329657 - 24329789
Alignment:
Q  15 tgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataattgttggttttcaatg 113  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||||   ||||| |||||||| |||  |||| ||||||||| ||||| ||||||||     
T  24329657 tgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtacattttatattaaataggtatcttttaaataaataaatgttgtttttcaatt 24329756  T
Q  114 aaaaattatcacttttagttgccttaacatgca 146  Q
    ||||||||  |||||||| |  |||||||||||    
T  24329757 aaaaattactacttttagatatcttaacatgca 24329789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 30839951 - 30839794
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  30839951 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataatt 30839852  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  30839851 gttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 30839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 36597749 - 36597592
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  36597749 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataatt 36597650  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  36597649 gttgg-tttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcaca 36597592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30893799 - 30893748
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgactt 52  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  30893799 atcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgactt 30893748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32019992 - 32020069
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaata 78  Q
    |||||||||||||||||||||| |||||| |||||| | |||| |||| |||||||||||||| || || ||||||||    
T  32019992 atcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattctatattaaata 32020069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 5958196 - 5958275
Alignment:
Q  66 tttaaattaaatatgtag-tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||| ||||||||||||  |||||||||| ||||||||| |||||||||||||||||  |||||||||| | ||||||||    
T  5958196 tttatattaaatatgtaaatttttaataattaattgttgattttcaatgaaaaattactacttttagtttctttaacatg 5958275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 6863726 - 6863584
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| ||| || |||||| ||||||||||   ||||||||||    ||||  ||||||||| | | |||||| |||||||||    
T  6863726 atcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttatattggaacttgaacattttgtattaaatatataactttttattaaataatt 6863627  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
    ||||| ||||||| |||| ||   |||||||||| |||||||||    
T  6863626 gttgg-tttcaataaaaacttgctacttttagttaccttaacat 6863584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 29538828 - 29538755
Alignment:
Q  70 aattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
    |||||||||| ||| |||||||||||||||||||||||| |||||||| |||   |||||| |||| |||||||    
T  29538828 aattaaatatatagcttttaataaataattgttggtttttaatgaaaagttacttcttttaattgcattaacat 29538755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31567499 - 31567616
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    ||||| |||||||||||||||| ||| || |||||| | |||| |||| |||| || ||||   ||||| ||||||||||||| |||||||| |||||||    
T  31567499 atcatatgcaaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaatatgtagttttttaatgaataatt 31567598  T
Q  100 gttggttttcaatgaaaa 117  Q
     ||| |||||||| ||||    
T  31567599 attgtttttcaataaaaa 31567616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3398390 - 3398330
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  3398390 atcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 3398330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15240958 - 15241074
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttt-taataaataatt 99  Q
    |||||||||||||||| ||||| ||| ||||| ||| || ||| ||||  ||| || |||||  | ||| ||||||||| || |||| ||||||||||||    
T  15240958 atcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaatttgtgcatgttatattaaatatataattttttaataaataatt 15241057  T
Q  100 gttggttttcaatgaaa 116  Q
    |||| ||||||||||||    
T  15241058 gttgtttttcaatgaaa 15241074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 10664986 - 10665116
Alignment:
Q  14 ttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaat 112  Q
    ||||||||  |||||| |||||| | |||| |||| |||||||||||||| ||  | ||||||| | ||  ||||||||||||||||  |  ||||||||    
T  10664986 ttgcacatcttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattgcatattaaatttataactttttaataaataattaata-ttttcaat 10665084  T
Q  113 gaaaaattatcacttttagttgccttaacatg 144  Q
    ||||| |||| |||||||||| ||||||||||    
T  10665085 gaaaagttattacttttagttaccttaacatg 10665116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 12332505 - 12332429
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  12332505 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 12332429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 31613159 - 31613235
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  31613159 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 31613235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 31705097 - 31705021
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  31705097 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 31705021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35151389 - 35151313
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaat 77  Q
    |||||||||||||||||| ||| ||| ||||||||| |||||| |||   ||| ||||||||  |||||||||||||    
T  35151389 atcatgtgcaaatttgcatatgttaaaaagtttaaaatagtaaatttacattgtaacttgtgcattttaaattaaat 35151313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 40454229 - 40454153
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  40454229 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 40454153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 6e-53; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 7349858 - 7349702
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||  |||||| |||||||||    
T  7349858 atcatgtgtaaatttgtacatgataagaagtttaaagtagtaactttgacttaaaacttgtgttttttatattaaatatgtaacttttaacaaataattg 7349759  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcac 155  Q
    ||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||    
T  7349758 ttggttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcac 7349702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 29190824 - 29190981
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| | |||||||||| |   |||||| ||||||||    
T  29190824 atcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacttgtgtttttaatattaaatatgcaacatttaatcaataattg 29190923  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 156  Q
    |||||||||||||||||||||  |||||||||| |||||||  |||||||||||||||    
T  29190924 ttggttttcaatgaaaaattactacttttagttaccttaacatatgcaatattgcaca 29190981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 41415565 - 41415703
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||    
T  41415565 atcatgtgcaaatttgcacatgataataagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtagcttttaataaataattg 41415664  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgcctta 139  Q
    ||| |||||||| |||| |||  ||||||||||||||||    
T  41415665 ttgattttcaattaaaagttactacttttagttgcctta 41415703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 10813502 - 10813658
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaatt-aaatatgtagtttttaataaataatt 99  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||||||||||  || |||||||||||||||| |||||||||  |||||| ||||||||    
T  10813502 atcatgtgcagatttgcatatgataataagtttaaagtagtaactttgacttaaaatttgtgttttttaaattaaaatatgtaacttttaacaaataatt 10813601  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgca 154  Q
    ||||||||||||| |||| |||| ||||||||||||||||||  |||||||||||||    
T  10813602 gttggttttcaataaaaagttattacttttagttgccttaacatatgcaatattgca 10813658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 23553740 - 23553582
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||| ||||  || |||| ||||||| ||||||||||||||||||||| ||||||||    
T  23553740 atcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgtagtttttaatcaataattg 23553641  T
Q  101 ttggttttcaat-gaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||  ||||||||  | |||||||| ||||||||  ||||||||||||||    
T  23553640 ttggttttcaataaaaaaattactatttttagttaccttaacatgtgcaatattgcaca 23553582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 35999955 - 36000103
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||       ||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  35999955 atcatgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt-------aacttgtgttttttatattaaatatgtagcttttaatcaataattg 36000047  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaacatg--caatattgca 154  Q
    |||||||||||| |||| |||  |||||||||| ||||||||||  ||||||||||    
T  36000048 ttggttttcaataaaaagttactacttttagttaccttaacatgtacaatattgca 36000103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 47326900 - 47327044
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||  ||| | ||||||||||||| |||||||||||||| |    
T  47326900 atcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagttttttaataaataagt 47326999  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||| |||||||||||||||||  |||||||| || |||||||||    
T  47327000 tttgtttttcaatgaaaaattactacttttagatgtcttaacatg 47327044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 47341696 - 47341840
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||  ||| | ||||||||||||| |||||||||||||| |    
T  47341696 atcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagttttttaataaataagt 47341795  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||| |||||||||||||||||  |||||||| || |||||||||    
T  47341796 tttgtttttcaatgaaaaattactacttttagatgtcttaacatg 47341840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 16667392 - 16667536
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||| |  ||| ||| ||||| ||||||||| ||||| ||||||||||||| |||||||||||||| |    
T  16667392 atcatgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaatatgtagctttttaataaataagt 16667491  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||| |||||||||||||||||  |||||||| || |||||||||    
T  16667492 gttgtttttcaatgaaaaattactacttttagatgtcttaacatg 16667536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23051390 - 23051490
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || |||||||||  ||||||||||||||||    
T  23051390 atcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgttttttatataaaatatgtaacttttaataaataattg 23051489  T
Q  101 t 101  Q
    |    
T  23051490 t 23051490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 53961488 - 53961350
Alignment:
Q  5 tgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttgg 104  Q
    |||||||||||||||||| ||||||||||||| |||||| ||||||||| || |||||||||||| ||||||||||||   |||||  |||||||||||     
T  53961488 tgtgcaaatttgcacatgttaagaagtttaaattagtaattttgacttgaaatttgtgttttttatattaaatatgtaacatttaaacaataattgttga 53961389  T
Q  105 ttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
    |||||||||||||||||  |||||||||| | |||||||    
T  53961388 ttttcaatgaaaaattactacttttagttactttaacat 53961350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 4329764 - 4329635
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||||||| || || ||||||||| ||||||||||||  ||||||| |||||| |    
T  4329764 atcatgtgcaaatttgcatatgttaaaaagtttaaagtagtaactttgacttgaaatttatgttttttatattaaatatgtaacttttaatcaataatcg 4329665  T
Q  101 ttggttttcaatgaaaaattatcactttta 130  Q
    |||||||||||| ||||||||  |||||||    
T  4329664 ttggttttcaattaaaaattactactttta 4329635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 48910810 - 48910947
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||||| ||| |||| ||||||||||||  |||||||||||| ||||||| ||||||||    
T  48910810 atcatatgcaaatttgcatatgttaagaagtttaaagtagtaactttaactaggaatttgtgttttttatgttaaatatgtagcttttaatcaataattg 48910909  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgcctt 138  Q
    ||  |||||||| ||||||||  |||||||||| ||||    
T  48910910 ttaattttcaataaaaaattactacttttagttacctt 48910947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 54495645 - 54495789
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||  ||| | ||||||||||||| |||||||||||||| |    
T  54495645 atcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagt 54495744  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||| |||||||  ||||||||  |||||||| |  |||||||||    
T  54495745 tttgtttttcaaaaaaaaattactacttttagatatcttaacatg 54495789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 10389279 - 10389408
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttg 103  Q
    ||||| ||||||||||||| ||| || ||| ||||||||| |||||||| |||||||||||||||| || |||||||||  ||||||| |||||||||||    
T  10389279 atgtgtaaatttgcacatgttaaaaaatttcaagtagtaattttgacttagaacttgtgttttttatatgaaatatgtaacttttaatcaataattgttg 10389378  T
Q  104 gttttcaatgaaaaattatcacttttagtt 133  Q
    ||||||||| |||| |||  ||||||||||    
T  10389379 gttttcaattaaaagttaatacttttagtt 10389408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 27362561 - 27362430
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| |||||  ||| | ||||||||||||| ||||| |||||||| |    
T  27362561 atcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaatatgtagctttttgataaataagt 27362462  T
Q  100 gttggttttcaatgaaaaattatcacttttag 131  Q
     ||| |||||||| ||||||||  ||||||||    
T  27362461 tttgtttttcaataaaaaattactacttttag 27362430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 8736823 - 8736962
Alignment:
Q  5 tgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgttg 103  Q
    |||| ||||||||||||| |||||| |||||||| |||||||||||||||||| ||||  ||| | ||||||||||| | |||||||||||||| | |||    
T  8736823 tgtgtaaatttgcacatgttaagaaatttaaagtggtaactttgacttggaac-tgtgcatttcatattaaatatgtaactttttaataaataagttttg 8736921  T
Q  104 gttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     |||||||| ||||||||  |||||||| || |||||||||    
T  8736922 tttttcaataaaaaattactacttttagatgtcttaacatg 8736962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 49228824 - 49228756
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttta 69  Q
    ||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||    
T  49228824 atcatgtgcaaatttgcacgtgttaagaagtttaaattagtaactttgacttggaacttgtgtttttta 49228756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 2097037 - 2096883
Alignment:
Q  5 tgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttg 103  Q
    |||| ||||||||||||| ||||||||| ||| | |||| ||||  ||||||||||||  ||||| ||||||||| ||  ||||||||||||||||||||    
T  2097037 tgtgaaaatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatatataactttttaataaataattgttg 2096938  T
Q  104 gttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 156  Q
     |||||||| |||| || |||||||||||||  |||||   ||||||||||||||    
T  2096937 tttttcaataaaaagttgtcacttttagttgatttaacttgtgcaatattgcaca 2096883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 17409994 - 17409850
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttttt-aataaataatt 99  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||   ||| | |||||||||  | ||||| |||||||||||    
T  17409994 atcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatataaattttttgaataaataatt 17409895  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||| |||||||  |||| |||  ||| |||||||  ||||||||    
T  17409894 gttgtttttcaagaaaaagttactactattagttgttttaacatg 17409850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 34941448 - 34941308
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||| |||||||||||||||||||||||||| |||||| ||||  |||||||||||   ||||  ||| ||||| | | ||||||||||||| ||    
T  34941448 atcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaacttgtacattttgtatttaatatataactttttaataaatagtt 34941349  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaa 140  Q
    |||| |||||||| |||| || | |||||||||| ||||||    
T  34941348 gttgtttttcaataaaaagttgttacttttagttaccttaa 34941308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 51691511 - 51691399
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||| ||||||||||||| |||||| ||| || |||||||||||  ||||||||||| | |||| |||||||||| ||| ||||||||||||||||    
T  51691511 atcatgtgtaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaatatatagctttttaataaataatt 51691412  T
Q  100 gttggttttcaat 112  Q
     || |||||||||    
T  51691411 attagttttcaat 51691399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 49181242 - 49181084
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||||||||| || ||||||||| ||| |||||| ||||  ||| ||||||||  ||||| ||||||||||| | |||| ||||||| |||    
T  49181242 atcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataaatgatt 49181143  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||| |||||||| |||  ||   |||||||||| ||||||||  ||||||||||||||    
T  49181142 gttgtttttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcaca 49181084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 39539607 - 39539513
Alignment:
Q  28 aagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaatgaaaaatta 121  Q
    ||||||||| | |||||| ||||||| ||||||||  ||| | ||||||||||||| |||||||||||||| ||||| |||||||||||||||||    
T  39539607 aagtttaaaatggtaactatgacttgaaacttgtgaatttcatattaaatatgtagctttttaataaataagtgttgtttttcaatgaaaaatta 39539513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 39877000 - 39876844
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||| ||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  || |||||| | | |||||  |||||||||    
T  39877000 atcatgtgtaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtatcaaatatataactttttgttaaataatt 39876901  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcac 155  Q
    ||||| ||||||| |||| |||  |||||||||| ||||||||  |||||||||||||    
T  39876900 gttgg-tttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcac 39876844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 25843464 - 25843317
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaac--ttgtgttttttaaattaaatatgta--gtttttaataaata 96  Q
    |||| ||||||||||| | ||| ||| ||||||||||||||||||||| ||| ||||  |||||  ||||| ||||||||| ||   ||||||| ||||     
T  25843464 atcacgtgcaaatttgtagatgttaaaaagtttaaagtagtaactttgtcttagaacttttgtgcattttatattaaatatataagctttttaacaaatg 25843365  T
Q  97 attgttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     |||||| |||||||| |||| |||  |||||||||||| ||||||||    
T  25843364 gttgttgtttttcaataaaaagttactacttttagttgctttaacatg 25843317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 49228456 - 49228369
Alignment:
Q  71 attaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 156  Q
    ||||||||||||   |||||| || |||||||||||||||||||||| |||  |||||||||| |||||||  |||||||||||||||    
T  49228456 attaaatatgtaacatttaatcaacaattgttggttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcaca 49228369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 9759150 - 9759307
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||| |||||||||||||| |||||| |||||| |||||||||||  |||||| |||    ||||  ||||||||| | | |||||  |||||||||    
T  9759150 atcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaagttgaacattttgtattaaatatataactttttgttaaataatt 9759249  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  9759250 gttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 9759307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 50352472 - 50352315
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||| |||||||||||||||| |||||| |||||| |||||| ||||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  50352472 atcatatgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttgaacattttgtattaaatatataactttttgttaaataatt 50352373  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  50352372 gttgg-tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 50352315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18882275 - 18882335
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  18882275 atcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 18882335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 23438322 - 23438191
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgtt 102  Q
    ||||||||||||||||||| | |||| |||||| |||||||||||  ||| |||||||   ||||| | ||||||||| |  ||||||||||| ||||||    
T  23438322 atgtgcaaatttgcacatgttgagaattttaaaatagtaactttgttttgaaacttgttcattttata-taaatatgttgccttttaataaattattgtt 23438224  T
Q  103 ggttttcaatgaaaaattatcacttttagttgc 135  Q
    | |||||||| |||| |||  || |||||||||    
T  23438223 gtttttcaataaaaagttactacatttagttgc 23438191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24685007 - 24684947
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  24685007 atcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgt 24684947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 39216173 - 39216057
Alignment:
Q  19 catgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagttt-ttaataaataattgttggttttcaatgaaaa 117  Q
    |||| ||||||||||||| || ||  |||| || | ||||||||  ||||| |||||||||||||||| | |||||||| |||||| |||| ||| ||||    
T  39216173 catgttaagaagtttaaaataatagttttgtctcgaaacttgtgcattttatattaaatatgtagtttgtcaataaatagttgttgttttttaataaaaa 39216074  T
Q  118 attatcacttttagttg 134  Q
     ||| ||||||||||||    
T  39216073 cttaccacttttagttg 39216057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 52391468 - 52391357
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataatt 99  Q
    |||||||| ||||||||||||| ||||||||||||| ||| || ||||  |||||||||||   ||| | |||||||||   | |||| |||||||||||    
T  52391468 atcatgtgtaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataatt 52391369  T
Q  100 gttggttttcaa 111  Q
    |||| |||||||    
T  52391368 gttgtttttcaa 52391357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36971444 - 36971326
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||| |||||||||| | |||| |||||| |||||| ||||||||||  |||| |||||||   ||||| |||||||||||||  ||| |||||||  ||    
T  36971444 atcaagtgcaaatttacgcatgttaagaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaatatgtagcctttaaataaattttt 36971345  T
Q  100 gttggttttcaatgaaaaa 118  Q
    |||| |||||||| |||||    
T  36971344 gttgtttttcaataaaaaa 36971326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 19450911 - 19450968
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    ||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  19450911 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 19450968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 51070406 - 51070520
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||| |||||||||| |  |||||| |||||| | |||| ||||  ||| ||||||||| ||||| ||||||||| ||  |||||||||||| |||    
T  51070406 atcatgtgaaaatttgcacgt--taagaaatttaaaatggtaagtttgttttgtaacttgtgtattttatattaaatatataactttttaataaatgatt 51070503  T
Q  100 gttggttttcaatgaaa 116  Q
    | || ||||||||||||    
T  51070504 ggtgtttttcaatgaaa 51070520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 32459498 - 32459422
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  32459498 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 32459422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 40049725 - 40049571
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgtt 102  Q
    ||||||||||||||||||| |||||| |||||| |||||| ||||  |||||||||     ||||  ||||||||| | | |||||  ||||||||||||    
T  40049725 atgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactttaacattttttattaaatatataattttttgttaaataattgtt 40049626  T
Q  103 ggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    || |||| || |||| |||  |||||||||| | ||||||  ||||||||||||||    
T  40049625 gg-tttctataaaaacttactacttttagttactttaacatgtgcaatattgcaca 40049571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 49250345 - 49250421
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||| ||| |||||| |||||||||| || |||   ||| ||||||||| ||||| |||||||||    
T  49250345 catgtgcaaatttgcatatgttaagaaatttaaagtagcaagtttatattgaaacttgtgtattttacattaaatat 49250421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 42479900 - 42479978
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||||| |||||| |||||  |  ||| |||| |||||||||||||  ||||| || ||||||    
T  42479900 atcatgtgcaaatttgcacatgttaagaaatttaatatgataaatttgtcttggaacttgtgcattttatatcaaatat 42479978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 46803624 - 46803574
Alignment:
Q  84 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttg 134  Q
    |||||||||||||||| ||| |||||||| ||||| | |||||||||||||    
T  46803624 tttttaataaataatttttgtttttcaataaaaaaatttcacttttagttg 46803574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4779444 - 4779477
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagttta 34  Q
    |||||||||||||||||||||| |||||||||||    
T  4779444 atcatgtgcaaatttgcacatgttaagaagttta 4779477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 143
Target Start/End: Original strand, 13009813 - 13009906
Alignment:
Q  51 ttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
    ||||||||||| | ||||  ||||||||| ||| |||||| ||||||||| || ||||||||| |||| |||  |||||||||||  |||||||    
T  13009813 ttggaacttgtatattttgtattaaatatatagctttttagtaaataattattagttttcaataaaaacttaatacttttagttgttttaacat 13009906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 16069299 - 16069336
Alignment:
Q  84 tttttaataaataattgttggttttcaatgaaaaatta 121  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  16069299 tttttaataaataattgttgtttttcaataaaaaatta 16069336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 19468361 - 19468304
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    ||||||||||||||||||| ||||||||||||| ||| || ||||  ||| |||||||    
T  19468361 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgt 19468304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Complemental strand, 27298977 - 27298940
Alignment:
Q  84 tttttaataaataattgttggttttcaatgaaaaatta 121  Q
    ||||||||||||||||| || |||||||||||||||||    
T  27298977 tttttaataaataattggtgtttttcaatgaaaaatta 27298940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40682601 - 40682550
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttg 53  Q
    ||||||||||| |||||||||| |||||| |||||| ||||||||||| ||||    
T  40682601 atcatgtgcaa-tttgcacatgttaagaaatttaaaatagtaactttgtcttg 40682550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 41887579 - 41887655
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||| ||||||||| ||||| |||||||||    
T  41887579 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaatat 41887655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 49332419 - 49332359
Alignment:
Q  84 tttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||||||||||||||||  |  ||||||||||||| |||| ||||||| || ||||||||||    
T  49332419 tttttaataaataattaatatttttcaatgaaaagttattacttttaattaccttaacatg 49332359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 55517469 - 55517501
Alignment:
Q  71 attaaatatgtagtttttaataaataattgttg 103  Q
    |||||||||||| ||||||||||||||||||||    
T  55517469 attaaatatgtattttttaataaataattgttg 55517501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 99; Significance: 9e-49; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 13255 - 13098
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| | |||||| |||||||||||| ||||||||||||| ||||||| || |||||    
T  13255 atcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaatttggaatttgtgttttttatattaaatatgtagcttttaatcaacaattg 13156  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaac--atgcaatattgcaca 156  Q
    |||||||||||||||||||||  |||||||||| |||||||  |||||||||||||||    
T  13155 ttggttttcaatgaaaaattactacttttagttaccttaacatatgcaatattgcaca 13098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 31069590 - 31069733
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||   |||||| ||||||||    
T  31069590 atcatgtgcaaatttacacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatttaatcaataattg 31069689  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||||||||||| |||| |||  |||||||||| ||||||||||    
T  31069690 ttggttttcaataaaaacttactacttttagttaccttaacatg 31069733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 5362925 - 5363058
Alignment:
Q  25 aagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatca 124  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| || |||||||||||||||||||||| |||  |    
T  5362925 aagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaacaattgttggttttcaatgaaaagttacta 5363024  T
Q  125 cttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||| ||||||||  ||||||||||||||    
T  5363025 cttttagttaccttaacatgtgcaatattgcaca 5363058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 2830689 - 2830832
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    ||||||| |||||||||||||| ||||||||||||| || ||||||| | || ||| |||||||||||| ||||||||||||| ||||||| ||||||||    
T  2830689 atcatgtacaaatttgcacatgttaagaagtttaaaataataactttaatttagaatttgtgttttttatattaaatatgtagcttttaatcaataattg 2830788  T
Q  101 ttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||||||||||||||||| |||  |||||||||| ||||||||||    
T  2830789 ttggttttcaatgaaaagttactacttttagttaccttaacatg 2830832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 31169771 - 31169915
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgta-gtttttaataaataatt 99  Q
    |||||||| ||||||||||||| ||| || ||||||||||||||||||||||||||||||||  ||||| |||||||||||| ||||||||||| |||||    
T  31169771 atcatgtgtaaatttgcacatgttaacaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttttaataattaatt 31169870  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||||||||||| |||||||||  | ||||||| |||||||||||    
T  31169871 attggttttcaaagaaaaattactatttttagtagccttaacatg 31169915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 10887199 - 10887055
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||| ||||| ||||||||||||| |||||||||||||| |    
T  10887199 atcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaatatgtagctttttaataaataagt 10887100  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||| |||||||| ||||||||  |||||||| |  |||||||||    
T  10887099 tttgtttttcaataaaaaattactacttttagatatcttaacatg 10887055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 22974604 - 22974724
Alignment:
Q  24 taagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatc 123  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||| ||||||||||||| |||      
T  22974604 taagaagtttaaaatagtaactttaacttggaacttgtgttttttatattaaatatgtaacttttaatcaataattgttgattttcaatgaaaagttact 22974703  T
Q  124 acttttagttgccttaacatg 144  Q
    |||||||||| ||||||||||    
T  22974704 acttttagttaccttaacatg 22974724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 23813797 - 23813677
Alignment:
Q  24 taagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatc 123  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||| ||||||||||||| |||      
T  23813797 taagaagtttaaaatagtaactttaacttggaacttgtgttttttatattaaatatgtaacttttaatcaataattgttgattttcaatgaaaagttact 23813698  T
Q  124 acttttagttgccttaacatg 144  Q
    |||||||||| ||||||||||    
T  23813697 acttttagttaccttaacatg 23813677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 1017788 - 1017919
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgt 101  Q
    |||||| |||||| |||||| |||||||||||||||||||||||||||||| || |||||  ||||| ||||||||||| | ||||||||||||||||||    
T  1017788 catgtgtaaatttacacatgttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaatatgtaaatttttaataaataattgt 1017887  T
Q  102 tggttttcaatgaaaaattatcacttttagtt 133  Q
    |||||||||| ||||| |||  ||||||||||    
T  1017888 tggttttcaacgaaaagttactacttttagtt 1017919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 17596511 - 17596404
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||| ||||| ||||||| |||||||||| |||||    
T  17596511 atcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgatttggaacttgtgcattttatattaactatgtagatttttaataattaatt 17596412  T
Q  100 gttggttt 107  Q
    ||||||||    
T  17596411 gttggttt 17596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 31568279 - 31568163
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||| |||| |||||| ||||    
T  31568279 atcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttgatttgaaacttgtgttttttataataaatatgtagcttttgaataaa-aatt 31568181  T
Q  100 gttggttttcaatgaaaa 117  Q
    |||| |||||||| ||||    
T  31568180 gttgattttcaataaaaa 31568163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 6017026 - 6016882
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||  ||| | ||||||||| | | ||||||| |||||| |    
T  6017026 atcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatataactttttaaaaaataagt 6016927  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    |||| ||||||||||||| |||  |||||||| || |||| ||||    
T  6016926 gttgtttttcaatgaaaagttactacttttagatgtcttaccatg 6016882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 18332696 - 18332840
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    ||||||||||||||| |||||| |||||||||||||||  ||| ||||||||||||||| ||  ||| | ||||||||| ||| |||||||||||||| |    
T  18332696 atcatgtgcaaattttcacatgttaagaagtttaaagtgataattttgacttggaacttatgcatttcatattaaatatatagctttttaataaataagt 18332795  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||| |||||||| ||||||||  |||||||| |  |||||||||    
T  18332796 tttgtttttcaataaaaaattactacttttagatatcttaacatg 18332840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3853113 - 3853052
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtg 62  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  3853113 atcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaagttgtg 3853052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 8977474 - 8977632
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||| |||||||||| || ||||||||| ||| |||||| ||||  ||| ||||||||  ||||| ||||||||||| | |||| ||||||| |||    
T  8977474 atcatgtgtaaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataaatgatt 8977573  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||| |||||||| |||  ||   |||||||||| ||||||||  ||||||||||||||    
T  8977574 gttgtttttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcaca 8977632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 14228134 - 14228291
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  14228134 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataatt 14228233  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| ||   ||||||| || ||||||||  ||||||||||||||    
T  14228234 gttgg-tttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcaca 14228291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 28943777 - 28943934
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  28943777 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataatt 28943876  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| ||||||| |||| ||   ||||||| || ||||||||  ||||||||||||||    
T  28943877 gttgg-tttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcaca 28943934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 31503909 - 31503834
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    ||||||||||||||||||| |||||| ||||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  31503909 atgtgcaaatttgcacatgttaagaaatttaaagtagtaagtttatattggaacttgtgtattttatattaaatat 31503834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17141445 - 17141328
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||| ||| ||||| ||||||  |||||| |||| ||| |||||||    ||||| ||||||||||||| |||||||||||| |||    
T  17141445 atcatgtgcaaatttgcatatgttaagatgtttaagatagtaattttgtcttagaacttgctcattttatattaaatatgtagctttttaataaattatt 17141346  T
Q  100 gttggttttcaatgaaaa 117  Q
    |||| |||| ||| ||||    
T  17141345 gttgttttttaataaaaa 17141328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 26602520 - 26602596
Alignment:
Q  82 agtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||||||||| |||||||||||||||| ||||||||||  |||||||||| |||||| |  ||||||||||||||    
T  26602520 agtttttaataattaattgttggttttcagtgaaaaattactacttttagtttccttaatatgtgcaatattgcaca 26602596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 29863310 - 29863468
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat-gtagtttttaataaataatt 99  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  |||  | ||||||| ||  ||||| ||||| |||   | ||||||||||||||||    
T  29863310 atcatgtgcaaatttgcacatgttaagaagtttaaaatagtaaaattgtgtcggaacttttgcattttatattaactataaaactttttaataaataatt 29863409  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
     ||  ||||||||| ||| |||  | |||||||| | ||||||  ||||||||||||||    
T  29863410 attctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcaca 29863468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 3850651 - 3850578
Alignment:
Q  71 attaaatatgtagtttttaataaataattgttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||||||||||||  ||||||| ||||||| ||| ||||||||||||| ||   |||||||||||||||||||||    
T  3850651 attaaatatgtaacttttaatgaataattattgattttcaatgaaaagttgctacttttagttgccttaacatg 3850578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34692524 - 34692464
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    |||||||||||||||||||||| ||||||||||||| ||| || ||||  |||||||||||    
T  34692524 atcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgt 34692464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 17552595 - 17552752
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||| |||||| |||||| | ||  ||||||||||    ||||  ||||||||| | | |||||  |||||||||    
T  17552595 atcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaacttgaacattttgtattaaatatataattttttgttaaataatt 17552694  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||| |||| || |||| ||   |||||||||| ||||||||  ||||||||||||||    
T  17552695 gttgg-tttcgataaaaacttgctacttttagttaccttaacatgtgcaatattgcaca 17552752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23936384 - 23936483
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||||||||||||||||| ||| ||||||||  ||||||||||   |||||||||||   ||||| ||||||||  | | ||||||||||||||||    
T  23936384 atcatgtgcaaatttgcacatgttaacaagtttaacatagtaactttcttttggaacttgtacattttatattaaatacataactttttaataaataatt 23936483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 26602478 - 26602511
Alignment:
Q  19 catgataagaagtttaaagtagtaactttgactt 52  Q
    ||||||||||||||||||||||||||||||||||    
T  26602478 catgataagaagtttaaagtagtaactttgactt 26602511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 30591171 - 30591315
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    ||||||||||||||| |||||| |||||||||| || | |||| ||||  ||| ||||||| | ||||  ||||||| | | | ||||| ||||||||||    
T  30591171 atcatgtgcaaatttacacatgttaagaagttttaaatggtaattttgcattgtaacttgtatattttgtattaaatgtataactttttgataaataatt 30591270  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
    ||   |||||||| |||| |||  || ||||||||| ||||||||    
T  30591271 gtattttttcaataaaaacttactacatttagttgcgttaacatg 30591315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 33017891 - 33017737
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataattgtt 102  Q
    ||||||||||||||||||| ||| || |||||| |||||||||||  | ||||||||    ||||  ||||||||| | | |||||  ||||||||||||    
T  33017891 atgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatatataactttttgttaaataattgtt 33017792  T
Q  103 ggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    |||||| ||| |||| ||   | |||||||| ||||||||  ||||||||||||||    
T  33017791 ggtttt-aataaaaacttgctaattttagttaccttaacatgtgcaatattgcaca 33017737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 34733711 - 34733787
Alignment:
Q  3 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatat 79  Q
    |||||||||||||||||||| |||| |   ||||||||||| |||   ||||||||||||| ||||| |||||||||    
T  34733711 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 34733787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 20979142 - 20979107
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaa 36  Q
    |||||||||||||||||||||| |||||||||||||    
T  20979142 atcatgtgcaaatttgcacatgttaagaagtttaaa 20979107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 34300493 - 34300422
Alignment:
Q  40 gtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgttggttttca 110  Q
    |||||||||| ||| ||  ||||||||||| ||||||||||||| |||| ||||||||||| ||| ||||||    
T  34300493 gtaactttgatttgaaatatgtgttttttatattaaatatgtagcttttaaataaataattattgattttca 34300422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32614952 - 32614990
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagta 39  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  32614952 atcatgtacaaatttgcacatgttaagaagtttaaagta 32614990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 69
Target Start/End: Original strand, 32615281 - 32615314
Alignment:
Q  36 agtagtaactttgacttggaacttgtgtttttta 69  Q
    |||||||||||||| |||||||||||||||||||    
T  32615281 agtagtaactttgatttggaacttgtgtttttta 32615314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3261248 - 3261188
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgt 61  Q
    ||||||||||||||| |||||| ||| ||||||||| ||| |||||||  || ||||||||    
T  3261248 atcatgtgcaaatttacacatgttaaaaagtttaaaatagaaactttgcattagaacttgt 3261188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 32615540 - 32615584
Alignment:
Q  73 taaatatgtagtttttaataaataattgttggttttcaatgaaaa 117  Q
    ||||||||||| ||||||| |||||||| || |||||||||||||    
T  32615540 taaatatgtagcttttaatcaataattgatgattttcaatgaaaa 32615584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 5861 - 5703
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||| ||||  || |||| ||||||| ||||||||||||||||||||| ||||||||    
T  5861 atcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgtagtttttaatcaataattg 5762  T
Q  101 ttggttttcaat-gaaaaattatcacttttagttgccttaaca--tgcaatattgcaca 156  Q
    ||||||||||||  ||||||||  | |||||||| ||||||||  ||||||||||||||    
T  5761 ttggttttcaataaaaaaattactatttttagttaccttaacatgtgcaatattgcaca 5703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 3421 - 3565
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||| ||||||||||||  |||||||||||||||||| ||||| | ||||||||| ||||||||| ||||||||||||  ||||||| ||||||||    
T  3421 atcatgtgtaaatttgcacatattaagaagtttaaagtagttactttaaattggaacttatgttttttatattaaatatgtaacttttaatcaataattg 3520  T
Q  101 ttggttttcaatgaaaaa-ttatcacttttagttgccttaacatg 144  Q
    |||||||| ||||||||| |||  |||||||||| | ||||||||    
T  3521 ttggtttttaatgaaaaagttactacttttagttacattaacatg 3565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 37122 - 37266
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||  ||| | ||||||||||||| |||||||||||||| |    
T  37122 atcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagt 37221  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     ||| |||||||| ||||||||  |||||||| |  |||||||||    
T  37222 tttgtttttcaataaaaaattactacttttagatatcttaacatg 37266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 182212 - 182093
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattg 100  Q
    |||||||| ||||||| ||||| ||||||||||||||||||| | |||| ||| ||||||||||||||| ||||||||||||  ||||||||||||||||    
T  182212 atcatgtgtaaatttgtacatgttaagaagtttaaagtagta-cgttgatttgaaacttgtgttttttatattaaatatgtaacttttaataaataattg 182114  T
Q  101 ttggttttcaatgaaaaatta 121  Q
    || ||||||||| ||||||||    
T  182113 tttgttttcaataaaaaatta 182093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 8422 - 8564
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataatt 99  Q
    |||||||| ||||||||| ||| |||||| ||||||||||||||||||| || |||||||||  ||||| ||||||| ||||| ||||||||||||||||    
T  8422 atcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaataatt 8521  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacat 143  Q
    ||| ||||||||| ||||||||  |||||| ||||  |||||||    
T  8522 gtt-gttttcaataaaaaattaatacttttcgttgttttaacat 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 191326 - 191461
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataattgttg 103  Q
    ||||||||||||||||||| |||||| |||||| |   || |||| ||||||| |||||| ||||| ||||||||| || ||||||||||||||| |       
T  191326 atgtgcaaatttgcacatgttaagaaatttaaaatgacaaatttgtcttggaa-ttgtgtattttatattaaatatataatttttaataaataatcggat 191424  T
Q  104 gttttcaatgaaaaattatcacttttagttgccttaa 140  Q
    |||||||||||||||||| |||||||||||| |||||    
T  191425 gttttcaatgaaaaattaccacttttagttggcttaa 191461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 43634 - 43479
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagttt--aaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttttaataaataat 98  Q
    |||||||||||||||| | ||| ||||||||||  |||| | ||||||| ||||  ||||| | ||||||| ||||||||| ||  ||||||| ||||||    
T  43634 atcatgtgcaaatttgaatatgttaagaagtttttaaagcaataactttaacttaaaacttatattttttatattaaatatataacttttaattaataat 43535  T
Q  99 tgttggttttcaatgaaaaattatcacttttagttgccttaaca--tgcaatattgc 153  Q
    ||||| |||||||||||||||||  ||||||| || ||||||||  |||||||||||    
T  43534 tgttgattttcaatgaaaaattactactttta-ttaccttaacacgtgcaatattgc 43479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 16543 - 16654
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaa-atatgtagtttttaataaataatt 99  Q
    |||||||||||||||||||||| |||||||||||||||| ||  ||||| ||||||||||||| ||||  ||||| ||||  | ||||||||||||||||    
T  16543 atcatgtgcaaatttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtgtattttctattaatatat-aaatttttaataaataatt 16641  T
Q  100 gttggttttcaat 112  Q
    |||| ||| ||||    
T  16642 gttgttttccaat 16654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 94026 - 94170
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtagtttt-taataaataatt 99  Q
    |||||||||||||||||| ||| |||||||||| || || |||||||   ||||||||| |   ||||  ||||||||| ||||||| ||||||||||||    
T  94026 atcatgtgcaaatttgcatatgttaagaagttttaaatactaactttacattggaacttatacattttgtattaaatatatagttttttaataaataatt 94125  T
Q  100 gttggttttcaatgaaaaattatcacttttagttgccttaacatg 144  Q
     || ||||||||| |||| |||  |||||||||||  ||||||||    
T  94126 attagttttcaataaaaacttactacttttagttgatttaacatg 94170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 13574 - 13633
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgt 63  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||  ||| |||||||||    
T  13574 atgtgcaaatttgcacatgttaagaagtttaaattagtaagtttgcattgaaacttgtgt 13633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 22631 - 22516
Alignment:
Q  4 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgtag-tttttaataaataattgtt 102  Q
    |||| |||||||||||||| |||||| |||||| |  ||| |||| ||| |||||| ||| || ||  |||||||| ||| ||||||||||||||||| |    
T  22631 atgtacaaatttgcacatgttaagaaatttaaaatgttaattttgtcttagaacttttgtattctatgttaaatatatagctttttaataaataattgat 22532  T
Q  103 ggttttcaatgaaaaa 118  Q
    | |||||||| |||||    
T  22531 gtttttcaataaaaaa 22516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9095 - 9213
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttaaattaaatatgt-agtttttaataaataatt 99  Q
    |||||||| |||||| | |||||||||||||| ||| |||||| |||   ||||||| ||||| ||||| ||||||| | | |||||||||||| | |||    
T  9095 atcatgtgaaaatttacccatgataagaagttcaaaatagtaagtttattttggaacatgtgtattttacattaaatgtataagtttttaataattgatt 9194  T
Q  100 gttggttttcaatgaaaaa 118  Q
    |||| || ||||| |||||    
T  9195 gttgtttatcaataaaaaa 9213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 1451 - 1486
Alignment:
Q  1 atcatgtgcaaatttgcacatgataagaagtttaaa 36  Q
    |||||||||||||||||||||| |||||||||||||    
T  1451 atcatgtgcaaatttgcacatgttaagaagtttaaa 1486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University