View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3044_low_7 (Length: 290)
Name: NF3044_low_7
Description: NF3044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3044_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 25 - 274
Target Start/End: Original strand, 15130281 - 15130530
Alignment:
| Q |
25 |
ctttccttgctataatagtatgtcttcatatttgtgtttgacctagggtttgtacccgatcgcaatttttaattaaactcaaacgctgcccatttgaatt |
124 |
Q |
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| T |
15130281 |
ctttccttgctataatagtatgtgttcatatttgtgtttgacctagggtttgtacccgatcgcaatttttaattaaactcaaacgctgcccatttgaatt |
15130380 |
T |
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| Q |
125 |
gaattcatgagaactgtagaaaggaacaagtatgattttcatacatgcatacatgcaagcaaacctgttgacagtatttcatctgctgagcacaaatagt |
224 |
Q |
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| T |
15130381 |
gaattcatgagaactgtagaaaggaacaagtatgattttcatatatgcatacatgcaagcaaacctgctgacagtatttcatctgctgagcacaaatagt |
15130480 |
T |
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| Q |
225 |
tgtattttagtgtataaatattctgattagctcacgtacagagcatataa |
274 |
Q |
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| T |
15130481 |
tgtattttagtgtataaatattctgattagctcacgtacaaagcatataa |
15130530 |
T |
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