View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3047_low_16 (Length: 374)
Name: NF3047_low_16
Description: NF3047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3047_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 18 - 361
Target Start/End: Complemental strand, 6352266 - 6351924
Alignment:
| Q |
18 |
cattcatctccttatactttaggcgttacgtcaaataataattctgtcatttgtaataaaatgcaacatatgattctactttggtatcaagtaaatccat |
117 |
Q |
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| T |
6352266 |
cattcatctccttatactttaggcgttacgtcaaataataattctgtcatttgtaataaaatgcaaactatgattctactttggtatcaagtaaatccat |
6352167 |
T |
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| Q |
118 |
ttggtatgctagctaggccatgctaatggtcaatttgtcaaaaatgtaatttccatctgtaatataccaattgctagtaaagaactttatggtttttgta |
217 |
Q |
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| T |
6352166 |
ttggtatgctagctaggccatgctaatggtcaatt-gtcaaaaatgtaatttccatctgtaatataccaattgctagtaaagaactttatggtttttgta |
6352068 |
T |
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| Q |
218 |
attcttgctgtgttggtaaatcacatcgattacatactccactttccattactattcattctaaattatttgaagtaattcacacaaaattacggagccc |
317 |
Q |
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| T |
6352067 |
attcttgctgtgttggtaaatcacatcgattacatactccactttccattactattcattctaaattatttgaagtaattcacacaaaattacggagccc |
6351968 |
T |
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| Q |
318 |
tactcctgagccatcacattttagctacacctttgtatattctt |
361 |
Q |
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| T |
6351967 |
tactcctgagccatcacattttagttacacctttgtatattctt |
6351924 |
T |
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