View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3047_low_8 (Length: 487)

Name: NF3047_low_8
Description: NF3047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3047_low_8
NF3047_low_8
[»] chr1 (46 HSPs)
chr1 (240-472)||(3872729-3872960)
chr1 (13-240)||(3873067-3873299)
chr1 (387-472)||(25543340-25543425)
chr1 (387-466)||(6133725-6133804)
chr1 (393-472)||(28218143-28218222)
chr1 (388-470)||(13114767-13114849)
chr1 (387-472)||(2225226-2225309)
chr1 (384-470)||(41917992-41918078)
chr1 (387-472)||(26980357-26980442)
chr1 (387-470)||(11135739-11135822)
chr1 (387-470)||(19101698-19101781)
chr1 (387-470)||(22540368-22540451)
chr1 (387-470)||(32848680-32848763)
chr1 (388-470)||(18157039-18157121)
chr1 (410-472)||(32211879-32211941)
chr1 (387-452)||(39039470-39039535)
chr1 (387-470)||(11430441-11430524)
chr1 (387-470)||(14094098-14094181)
chr1 (387-470)||(15523210-15523293)
chr1 (387-470)||(15531204-15531287)
chr1 (382-472)||(41958080-41958168)
chr1 (388-470)||(31074717-31074799)
chr1 (384-472)||(743416-743504)
chr1 (406-470)||(14341018-14341082)
chr1 (388-468)||(41095708-41095788)
chr1 (387-470)||(44739118-44739201)
chr1 (401-472)||(49730878-49730949)
chr1 (415-470)||(50773208-50773263)
chr1 (410-472)||(29673498-29673560)
chr1 (388-472)||(1093168-1093250)
chr1 (390-470)||(4578674-4578752)
chr1 (417-470)||(24911493-24911546)
chr1 (377-470)||(43851132-43851225)
chr1 (13-69)||(3884316-3884372)
chr1 (383-460)||(8741330-8741409)
chr1 (333-364)||(3884179-3884210)
chr1 (387-470)||(5602657-5602739)
chr1 (387-470)||(9165302-9165385)
chr1 (398-469)||(11987637-11987708)
chr1 (387-453)||(13388334-13388400)
chr1 (387-472)||(46335094-46335182)
chr1 (388-472)||(10659863-10659948)
chr1 (387-440)||(11430570-11430623)
chr1 (387-463)||(931374-931450)
chr1 (389-453)||(11135856-11135920)
chr1 (392-448)||(28274791-28274847)
[»] chr2 (40 HSPs)
chr2 (383-471)||(45554563-45554651)
chr2 (388-473)||(9470082-9470167)
chr2 (387-472)||(26767856-26767941)
chr2 (387-470)||(28898134-28898217)
chr2 (388-462)||(3804585-3804659)
chr2 (387-472)||(12989191-12989276)
chr2 (388-472)||(6980215-6980299)
chr2 (387-470)||(42182889-42182972)
chr2 (381-455)||(11539417-11539491)
chr2 (388-466)||(16719531-16719609)
chr2 (398-460)||(25666700-25666762)
chr2 (387-464)||(18511312-18511389)
chr2 (388-472)||(44274236-44274319)
chr2 (401-460)||(19639107-19639166)
chr2 (401-460)||(19837700-19837759)
chr2 (387-470)||(41546125-41546207)
chr2 (388-470)||(1107039-1107121)
chr2 (380-470)||(4964770-4964860)
chr2 (388-473)||(4602961-4603046)
chr2 (380-453)||(28898027-28898100)
chr2 (406-470)||(33747017-33747080)
chr2 (389-472)||(2122797-2122880)
chr2 (398-472)||(2476547-2476619)
chr2 (398-461)||(30718432-30718495)
chr2 (388-470)||(37228499-37228582)
chr2 (387-470)||(41805873-41805956)
chr2 (382-466)||(15508909-15508993)
chr2 (398-470)||(36471935-36472007)
chr2 (392-472)||(37652340-37652420)
chr2 (410-470)||(42579754-42579814)
chr2 (387-470)||(1110198-1110281)
chr2 (387-453)||(37719834-37719900)
chr2 (387-472)||(12098962-12099047)
chr2 (393-453)||(1110315-1110375)
chr2 (406-470)||(8009532-8009596)
chr2 (406-470)||(10339785-10339849)
chr2 (400-472)||(10981531-10981603)
chr2 (393-453)||(11729717-11729777)
chr2 (402-470)||(32701485-32701553)
chr2 (406-470)||(43400152-43400216)
[»] chr6 (24 HSPs)
chr6 (388-473)||(34905337-34905422)
chr6 (387-472)||(445818-445903)
chr6 (398-472)||(31116219-31116293)
chr6 (390-470)||(35128820-35128900)
chr6 (398-472)||(5106309-5106383)
chr6 (384-470)||(10133255-10133341)
chr6 (393-473)||(2675901-2675981)
chr6 (387-451)||(8441953-8442017)
chr6 (387-451)||(8450757-8450821)
chr6 (387-470)||(19090312-19090395)
chr6 (388-472)||(32122796-32122880)
chr6 (411-470)||(4595766-4595825)
chr6 (387-470)||(6531395-6531478)
chr6 (387-470)||(10060859-10060942)
chr6 (387-470)||(21987292-21987375)
chr6 (406-472)||(2931580-2931646)
chr6 (410-472)||(12327300-12327362)
chr6 (387-472)||(12753855-12753940)
chr6 (411-451)||(17226645-17226685)
chr6 (387-470)||(12690252-12690335)
chr6 (387-453)||(19090212-19090278)
chr6 (435-472)||(16852068-16852105)
chr6 (391-472)||(31443963-31444044)
chr6 (406-466)||(3030521-3030581)
[»] chr8 (33 HSPs)
chr8 (374-472)||(28413964-28414062)
chr8 (383-472)||(8903848-8903937)
chr8 (388-472)||(32072098-32072182)
chr8 (387-472)||(34861282-34861365)
chr8 (387-472)||(1977268-1977353)
chr8 (387-472)||(5979880-5979965)
chr8 (387-472)||(35151824-35151909)
chr8 (406-472)||(9952852-9952918)
chr8 (410-472)||(17499328-17499390)
chr8 (398-472)||(24056020-24056094)
chr8 (398-472)||(41727441-41727515)
chr8 (387-472)||(16983394-16983479)
chr8 (413-470)||(35689506-35689563)
chr8 (387-470)||(7599519-7599602)
chr8 (387-470)||(23685131-23685214)
chr8 (418-472)||(35797426-35797480)
chr8 (387-472)||(8914771-8914856)
chr8 (398-472)||(31301126-31301200)
chr8 (389-470)||(1205829-1205910)
chr8 (387-472)||(1423746-1423831)
chr8 (387-459)||(36629659-36629731)
chr8 (391-453)||(12212126-12212188)
chr8 (391-453)||(12456554-12456616)
chr8 (406-448)||(20545951-20545993)
chr8 (417-466)||(6387591-6387640)
chr8 (385-466)||(11962782-11962863)
chr8 (379-472)||(14236330-14236423)
chr8 (409-466)||(28211987-28212044)
chr8 (400-472)||(3099737-3099809)
chr8 (398-466)||(13407425-13407493)
chr8 (409-453)||(13856509-13856553)
chr8 (406-470)||(27799303-27799367)
chr8 (397-469)||(32022941-32023013)
[»] chr7 (46 HSPs)
chr7 (387-472)||(22189939-22190024)
chr7 (388-472)||(11824072-11824156)
chr7 (384-466)||(14795128-14795210)
chr7 (384-466)||(15242120-15242202)
chr7 (388-470)||(17749695-17749777)
chr7 (382-472)||(33008099-33008189)
chr7 (403-472)||(7775016-7775085)
chr7 (406-472)||(12271005-12271071)
chr7 (388-470)||(24539220-24539302)
chr7 (384-465)||(19422936-19423017)
chr7 (387-472)||(31502559-31502644)
chr7 (387-470)||(17354624-17354707)
chr7 (398-472)||(8073383-8073457)
chr7 (402-470)||(9111431-9111499)
chr7 (384-472)||(32212964-32213052)
chr7 (387-470)||(22786151-22786234)
chr7 (382-472)||(12263531-12263621)
chr7 (406-472)||(44511031-44511097)
chr7 (381-472)||(6442159-6442250)
chr7 (387-472)||(32205079-32205161)
chr7 (398-472)||(10934060-10934134)
chr7 (388-470)||(13919781-13919863)
chr7 (387-456)||(19840882-19840951)
chr7 (387-472)||(27888282-27888367)
chr7 (387-470)||(26703537-26703618)
chr7 (417-472)||(11692209-11692264)
chr7 (398-472)||(27949284-27949358)
chr7 (413-470)||(45909481-45909539)
chr7 (388-453)||(27320226-27320291)
chr7 (387-472)||(9648922-9649009)
chr7 (405-453)||(10619408-10619456)
chr7 (414-470)||(14759670-14759726)
chr7 (418-470)||(19494436-19494488)
chr7 (385-457)||(36845631-36845703)
chr7 (388-472)||(39254084-39254168)
chr7 (387-470)||(25428576-25428659)
chr7 (387-453)||(13919897-13919963)
chr7 (375-449)||(14759764-14759838)
chr7 (418-472)||(17813870-17813923)
chr7 (384-470)||(23434693-23434779)
chr7 (430-472)||(28713059-28713101)
chr7 (401-461)||(31874047-31874105)
chr7 (425-470)||(46994460-46994505)
chr7 (422-470)||(19840982-19841030)
chr7 (388-472)||(25092756-25092840)
chr7 (406-470)||(32055595-32055659)
[»] chr3 (40 HSPs)
chr3 (387-468)||(28529253-28529334)
chr3 (387-472)||(5452155-5452240)
chr3 (387-472)||(37776798-37776883)
chr3 (387-472)||(20493540-20493625)
chr3 (381-470)||(46450061-46450148)
chr3 (387-470)||(14236019-14236102)
chr3 (387-472)||(46160949-46161032)
chr3 (387-472)||(24734705-24734790)
chr3 (387-472)||(41451990-41452075)
chr3 (413-470)||(46237143-46237200)
chr3 (398-466)||(8825080-8825148)
chr3 (406-466)||(26310547-26310607)
chr3 (389-470)||(27243047-27243128)
chr3 (387-470)||(20791296-20791379)
chr3 (387-470)||(37600227-37600310)
chr3 (413-470)||(43657093-43657150)
chr3 (389-470)||(50661619-50661700)
chr3 (413-470)||(54140990-54141047)
chr3 (382-470)||(10769822-10769910)
chr3 (388-472)||(40715957-40716041)
chr3 (411-453)||(3313985-3314027)
chr3 (388-466)||(13809083-13809160)
chr3 (387-472)||(29389108-29389193)
chr3 (387-472)||(48351436-48351521)
chr3 (387-464)||(52124059-52124136)
chr3 (417-472)||(138793-138848)
chr3 (411-462)||(7419283-7419334)
chr3 (387-470)||(46575948-46576031)
chr3 (435-473)||(19345094-19345132)
chr3 (390-452)||(52951475-52951537)
chr3 (387-453)||(54140890-54140956)
chr3 (387-444)||(18722579-18722636)
chr3 (384-453)||(38928003-38928072)
chr3 (413-453)||(10769748-10769788)
chr3 (428-472)||(18427245-18427289)
chr3 (413-453)||(24748933-24748973)
chr3 (376-472)||(29755489-29755585)
chr3 (411-459)||(35094132-35094180)
chr3 (379-450)||(41387555-41387624)
chr3 (378-466)||(49720103-49720191)
[»] chr4 (50 HSPs)
chr4 (387-470)||(47237838-47237921)
chr4 (387-465)||(40991691-40991769)
chr4 (382-472)||(49077244-49077334)
chr4 (388-464)||(8108957-8109033)
chr4 (397-472)||(722167-722242)
chr4 (382-468)||(43771121-43771207)
chr4 (387-472)||(33653584-33653669)
chr4 (392-461)||(20454545-20454614)
chr4 (387-472)||(39471157-39471242)
chr4 (387-463)||(50571864-50571940)
chr4 (389-455)||(40812039-40812105)
chr4 (387-472)||(34129495-34129580)
chr4 (420-472)||(29699522-29699574)
chr4 (406-470)||(33996032-33996096)
chr4 (412-470)||(21776942-21777000)
chr4 (388-466)||(43958152-43958230)
chr4 (398-472)||(49242181-49242255)
chr4 (398-472)||(50164406-50164480)
chr4 (388-472)||(10169740-10169822)
chr4 (387-470)||(20225438-20225519)
chr4 (400-472)||(47009202-47009274)
chr4 (397-472)||(754675-754750)
chr4 (401-472)||(22592318-22592389)
chr4 (388-470)||(27654478-27654560)
chr4 (413-470)||(2187910-2187967)
chr4 (413-470)||(42862518-42862575)
chr4 (387-472)||(13519947-13520034)
chr4 (388-472)||(24834579-24834663)
chr4 (429-468)||(18421928-18421967)
chr4 (392-470)||(25719210-25719286)
chr4 (437-472)||(45311043-45311078)
chr4 (387-470)||(49682888-49682971)
chr4 (423-470)||(51206079-51206126)
chr4 (387-453)||(37315677-37315743)
chr4 (388-466)||(39016664-39016742)
chr4 (406-472)||(50481640-50481706)
chr4 (387-453)||(51206160-51206226)
chr4 (393-470)||(2088762-2088839)
chr4 (417-470)||(13069971-13070023)
chr4 (413-470)||(16178610-16178666)
chr4 (428-473)||(24938509-24938554)
chr4 (413-470)||(30867029-30867086)
chr4 (388-453)||(39016780-39016845)
chr4 (425-470)||(48608118-48608163)
chr4 (393-473)||(1559811-1559891)
chr4 (388-470)||(37315564-37315643)
chr4 (406-450)||(40615247-40615291)
chr4 (387-459)||(42862418-42862490)
chr4 (384-460)||(46287438-46287514)
chr4 (406-470)||(51904713-51904777)
[»] chr5 (29 HSPs)
chr5 (387-472)||(28490817-28490902)
chr5 (382-470)||(42224688-42224776)
chr5 (387-472)||(10142071-10142154)
chr5 (400-466)||(17537203-17537269)
chr5 (404-472)||(41330488-41330556)
chr5 (402-469)||(5465764-5465831)
chr5 (387-470)||(30325971-30326054)
chr5 (387-470)||(40971550-40971633)
chr5 (387-469)||(32309480-32309562)
chr5 (398-472)||(37455360-37455434)
chr5 (387-472)||(34368360-34368445)
chr5 (428-472)||(5413832-5413876)
chr5 (410-470)||(32050330-32050390)
chr5 (431-470)||(24915099-24915138)
chr5 (410-473)||(28434910-28434973)
chr5 (412-458)||(8912622-8912668)
chr5 (412-470)||(27592549-27592607)
chr5 (413-470)||(6263909-6263966)
chr5 (384-472)||(28090324-28090410)
chr5 (414-470)||(17568799-17568855)
chr5 (431-470)||(24990930-24990969)
chr5 (388-470)||(8912511-8912593)
chr5 (375-449)||(17568687-17568761)
chr5 (417-470)||(10253179-10253232)
chr5 (387-472)||(28611873-28611958)
chr5 (387-464)||(32050413-32050490)
chr5 (387-472)||(39246608-39246693)
chr5 (417-453)||(13456192-13456228)
chr5 (428-472)||(43405434-43405478)
[»] scaffold0838 (1 HSPs)
scaffold0838 (406-472)||(2241-2307)
[»] scaffold0832 (1 HSPs)
scaffold0832 (406-472)||(2272-2338)
[»] scaffold0543 (1 HSPs)
scaffold0543 (410-472)||(9687-9749)
[»] scaffold0492 (1 HSPs)
scaffold0492 (410-472)||(11233-11295)
[»] scaffold0005 (1 HSPs)
scaffold0005 (388-467)||(296837-296916)
[»] scaffold0194 (1 HSPs)
scaffold0194 (416-470)||(8512-8566)
[»] scaffold0099 (1 HSPs)
scaffold0099 (432-470)||(27358-27396)
[»] scaffold0018 (1 HSPs)
scaffold0018 (422-472)||(27847-27897)
[»] scaffold0016 (1 HSPs)
scaffold0016 (388-440)||(204707-204759)


Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 240 - 472
Target Start/End: Complemental strand, 3872960 - 3872729
Alignment:
Q  240 acattcaaaatatgtgtggagataaagaccggagcaagaaccaagtcttcattaaaaaccaaaagtgagaaagtagtagcacataaaatagtgtactgca 339  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3872960 acattcaaaatatgtgtggagataaagactggagcaagaaccaagtcttcattaaaaaccaaaactgagaaagtagtagcacataaaatagtgtactgca 3872861  T
Q  340 aaaagaaccaaatttggctaaaagaaatgagagaaatattttttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttat 439  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| |||    
T  3872860 aaaagaaccaaatttggctaaaagaaatgagagaaatattttttgaagaatgctagcaacactcacttttcaacactctctctagcactcactcttctat 3872761  T
Q  440 tagatgaaatcaatatatgtcccaccactttgt 472  Q
    || || ||||||||||||||| |||||||||||    
T  3872760 taaat-aaatcaatatatgtcacaccactttgt 3872729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 3873299 - 3873067
Alignment:
Q  13 ataaacttcatattttcttggtagaaatatttgcaaaatctattaagagcagttatc-----aaatcgcaattgaaccaaaatcattttaatgtattact 107  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||     ||||||||||||||||||||||||||||||||||||||    
T  3873299 ataaacttcatattttcttggtagaaatatttgtaaaatctatttagagcaattatcttttcaaatcgcaattgaaccaaaatcattttaatgtattact 3873200  T
Q  108 tttcttgtttaacctttatagatctaatatcagacttcacctttcagtcattcttttgatatttaatatcgtacacacatatgacattacatttgtaaac 207  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3873199 tttcttgtttaacatttatagatctaatatcagacttcatctttcaatcattcttttgatatttaatatcgtacacacatatgacattacatttgtaaac 3873100  T
Q  208 actaaagttgaactaattagaaccacacctaca 240  Q
    ||||| |||||||||||||||||||| ||||||    
T  3873099 actaaggttgaactaattagaaccactcctaca 3873067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 25543340 - 25543425
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| |||| ||||||||||||| || | ||||||||||| |||||||||||||||||||||||||||||||    
T  25543340 gaatgctagcaacactcacttttaaacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccactttgt 25543425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 6133804 - 6133725
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    |||||||||| ||||||| ||||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  6133804 gaatgctagcaacactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaatatatgtcccacca 6133725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 393 - 472
Target Start/End: Complemental strand, 28218222 - 28218143
Alignment:
Q  393 tagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  28218222 tagcaacactcatttttcaaccctctctttagcattcactcttttattggatgaaatcaatgtatgtctcaccactttgt 28218143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 13114849 - 13114767
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||||||||||  ||||  |||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  13114849 aatgctagcgacactctcttttggacactctctctaacactcactcttttattagataaaatcaatatatgtcccaccacttt 13114767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 2225226 - 2225309
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||  ||||||| |||||||||||||||  ||||  |||||||||||| |||||||||||| ||||||||||||||||||    
T  2225226 gaatgctagtaacactcaattttcaacactctct--agcacccactcttttattggatgaaatcaatgtatgtcccaccactttgt 2225309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 470
Target Start/End: Original strand, 41917992 - 41918078
Alignment:
Q  384 gaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||||||| ||||||  |||| | ||| |||||||||| ||||||||||||| | |||||||||| ||||||||||||||||    
T  41917992 gaagaatgctagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccacttt 41918078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 26980442 - 26980357
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||| | ||||||| ||||||||||||||||||  | ||||||| ||||| |||||||||||| |||||||||||| |||||    
T  26980442 gaatgctaacaacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgt 26980357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 11135739 - 11135822
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||||||  |||| | |||||||||||||| ||||| ||||||| | |||||||||| ||||||||||||||||    
T  11135739 gaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgtatgtcccaccacttt 11135822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 19101781 - 19101698
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||| ||| ||||  ||||||||| ||||| ||||| ||||||| |||||||||||| ||||||||||||||||    
T  19101781 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccacttt 19101698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 22540368 - 22540451
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||| ||| ||||  ||||||||| ||||| ||||| ||||||| |||||||||||| ||||||||||||||||    
T  22540368 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccacttt 22540451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 32848763 - 32848680
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| | ||||||  |||| |||||||||||||||| ||||||||||||| | |||||||| | ||||||||||||||||    
T  32848763 gaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccacttt 32848680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 18157039 - 18157121
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| |||||||  |||||||||||||||||| ||  |||| ||||||| |||||||| ||| ||||||||||||||||    
T  18157039 aatgctagggacactctcttttcaacactctctctaacacccacttttttattggatgaaattaatgtatgtcccaccacttt 18157121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 410 - 472
Target Start/End: Complemental strand, 32211941 - 32211879
Alignment:
Q  410 caacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||||| |||| |||||||||||||||||||||||||| ||||||| || |||||||    
T  32211941 caacactctctccagcactcactcttttattagatgaaatcaatgtatgtccaactactttgt 32211879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 452
Target Start/End: Complemental strand, 39039535 - 39039470
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaa 452  Q
    |||||||||| ||||||| ||||||||||||| | ||||| ||||||||||||| |||||||||||    
T  39039535 gaatgctagcaacactcacttttcaacactctttttagcactcactcttttattggatgaaatcaa 39039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 11430441 - 11430524
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| | ||||||  |||| | |||||| ||||||| ||||||||||||| | |||||||||| ||||||||||||||||    
T  11430441 gaatgctaacaacactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccacttt 11430524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 14094181 - 14094098
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||||| |   |||| ||||||||||| |||| ||||| ||||||| | |||||||||| ||||||||||||||||    
T  14094181 gaatgctagcgacattatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatgtcccaccacttt 14094098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 15523210 - 15523293
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| | ||| ||| ||||  ||||||||| ||||| ||||| ||||||| |||||||||||| ||||||||||||||||    
T  15523210 gaatgctatcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccacttt 15523293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 15531204 - 15531287
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| | ||| ||| ||||  ||||||||| ||||| ||||| ||||||| |||||||||||| ||||||||||||||||    
T  15531204 gaatgctatcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccacttt 15531287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 472
Target Start/End: Original strand, 41958080 - 41958168
Alignment:
Q  382 ttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| |||||||||  ||||||| ||||||||||||||   |||| |||||| |||||| |||||||||||| |||||||||||| |||||    
T  41958080 ttgaggaatgctagtaacactcacttttcaacactctca--agcactcactcatttattggatgaaatcaatgtatgtcccaccattttgt 41958168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 31074717 - 31074799
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||| | |||||||| ||| ||||||||| ||| |||| ||||||||||| ||||||||||||| |||||| | ||||||    
T  31074717 aatgctatcaacactcatgtttgaacactctccctaacatttactcttttatttgatgaaatcaatacatgtcctaacacttt 31074799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 472
Target Start/End: Original strand, 743416 - 743504
Alignment:
Q  384 gaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||| |||| |||||||||||| |||||||||| ||  ||||| |  |||||| |||||||||||| ||||| ||| ||||||||    
T  743416 gaagaatgttagccacactcattttttaacactctctttaaaattcaattgtttattggatgaaatcaatgtatgttccatcactttgt 743504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 470
Target Start/End: Complemental strand, 14341082 - 14341018
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||||||||| || ||| | ||||||| |||||||  ||||||||||||||||||||    
T  14341082 ttttcaacactctctctaacactcatttttttattggatgaaactaatatatgtcccaccacttt 14341018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 41095788 - 41095708
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccact 468  Q
    ||||||||| ||||||  |||| | |||||||||||||| |||||| |||||| | |||||||||| ||||||||| ||||    
T  41095788 aatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccatcact 41095708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 44739118 - 44739201
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||| |||| ||||||  |||| |||||||||||||||| |||||||||| ||   |||||| ||| ||||||||||||||||    
T  44739118 gaatgttagcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccaccacttt 44739201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 472
Target Start/End: Original strand, 49730878 - 49730949
Alignment:
Q  401 ctcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||| ||||||||||||| || || ||||||||||||||||| |||  |||||||||| ||| |||||||    
T  49730878 ctcattcttcaacactctctataacactcactcttttattagattaaactaatatatgtcacactactttgt 49730949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 415 - 470
Target Start/End: Complemental strand, 50773263 - 50773208
Alignment:
Q  415 ctctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||| || ||||||||||||| ||| |||||||||||||| ||||||||||    
T  50773263 ctctctctaacactcactcttttattggataaaatcaatatatgttccaccacttt 50773208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 472
Target Start/End: Original strand, 29673498 - 29673560
Alignment:
Q  410 caacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||||||| || ||| | ||||||| ||| ||||||||||||||||||||| |||||    
T  29673498 caacactctctctaacactcattattttattggataaaatcaatatatgtcccaccattttgt 29673560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 472
Target Start/End: Complemental strand, 1093250 - 1093168
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||| ||||| ||||||  ||||||| |  ||||  ||||| ||||||||||||||||||| ||||| ||||||||||||    
T  1093250 aatgctagcaacacttatttttgcacactcttt--agcacgcactcgtttattagatgaaatcaatgtatgttccaccactttgt 1093168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 470
Target Start/End: Complemental strand, 4578752 - 4578674
Alignment:
Q  390 tgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||| ||||||  |||||||||||||||  | || ||||||||||||| | |||||||||| || |||||||||||||    
T  4578752 tgctagcaacactctcttttcaacactctct--aacactcactcttttattgggtgaaatcaatgtaggtcccaccacttt 4578674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 24911493 - 24911546
Alignment:
Q  417 ctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||| ||||||||| ||||||||| || ||||||||||||||||    
T  24911493 ctctctagcactcattcttttattcgatgaaatccatgtatgtcccaccacttt 24911546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 470
Target Start/End: Complemental strand, 43851225 - 43851132
Alignment:
Q  377 attttttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||| ||||| |||| ||||||  |||| | | | |||||||| | |||||| |||||| | |||||||||| ||||||||||||||||    
T  43851225 attttttgaggaatgttagcaacactctcttttaagcgcactctctagtactcactcatttattgggtgaaatcaatgtatgtcccaccacttt 43851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 3884372 - 3884316
Alignment:
Q  13 ataaacttcatattttcttggtagaaatatttgcaaaatctattaagagcagttatc 69  Q
    |||||||| |||||||| ||||||||||||| || ||||||||||||| || |||||    
T  3884372 ataaacttgatattttcatggtagaaatattagctaaatctattaagaacaattatc 3884316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 460
Target Start/End: Complemental strand, 8741409 - 8741330
Alignment:
Q  383 tgaagaatgctagcgacactcatttttcaacactctctct--agcattcactcttttattagatgaaatcaatatatgtc 460  Q
    |||||||||||||| ||||||| ||||||| |||||||||  ||   ||||| ||||||| |||||||||||| ||||||    
T  8741409 tgaagaatgctagcaacactcacttttcaaaactctctctttagtggtcacttttttattggatgaaatcaatgtatgtc 8741330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 364
Target Start/End: Complemental strand, 3884210 - 3884179
Alignment:
Q  333 tactgcaaaaagaaccaaatttggctaaaaga 364  Q
    ||||||||||||||||||||||||||||||||    
T  3884210 tactgcaaaaagaaccaaatttggctaaaaga 3884179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 5602739 - 5602657
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||| ||| ||||||| ||||| || ||| |||||| || | ||||| ||||| |||||||| ||||||||||||||||||||    
T  5602739 gaatgttagggacactctttttt-aatactttctctaacacttactctcttattggatgaaattaatatatgtcccaccacttt 5602657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 9165302 - 9165385
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| | ||||||  |||| | |||||| ||| ||| ||||||||||||| | |||||||||| ||||||| ||||||||    
T  9165302 gaatgctatccacactctcttttgaccactctatcttgcactcactcttttattgggtgaaatcaatgtatgtcctaccacttt 9165385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 469
Target Start/End: Original strand, 11987637 - 11987708
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactt 469  Q
    ||||||| |||||||||||||||| | |||| | || |||||| |||||||| ||| ||||| |||||||||    
T  11987637 acactcacttttcaacactctctccaacatttattcatttattggatgaaattaatgtatgttccaccactt 11987708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 453
Target Start/End: Original strand, 13388334 - 13388400
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||||||||| ||||||  |||| || |||||||||| || ||||| ||||||| ||||||||||||    
T  13388334 gaatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaat 13388400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 46335094 - 46335182
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactctt---ttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| |  |||| |||| |||||||| ||||||| ||||||||   ||||| |||||||||||| ||| ||| ||||||||||    
T  46335094 gaatgctagcaaacctcacttttgaacactctttctagcactcactcttcttttattggatgaaatcaatctatatcctaccactttgt 46335182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 472
Target Start/End: Complemental strand, 10659948 - 10659863
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactctttt-attagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| |||| ||||||| ||||||| |||||||||| || ||||| |||| ||  ||||||||||||  |||||| ||||||||||    
T  10659948 aatgttagcaacactcacttttcaatactctctctaacactcactttttttatgggatgaaatcaatggatgtccgaccactttgt 10659863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 11430623 - 11430570
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttatt 440  Q
    |||||||||| ||||||  |||| | |||||||||||||| |||||||||||||    
T  11430623 gaatgctagcaacactctcttttgagcactctctctagcactcactcttttatt 11430570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 931374 - 931450
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtccca 463  Q
    |||||||||| ||||||| |||||||| || ||||||  | |||||||||||||  ||| || |||| |||||||||    
T  931374 gaatgctagcaacactcacttttcaactctatctctaatactcactcttttattgaatggaagcaatgtatgtccca 931450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 453
Target Start/End: Complemental strand, 11135920 - 11135856
Alignment:
Q  389 atgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||||||| ||||||  |||| |  ||||||||||||| ||||||||||||| | ||||||||||    
T  11135920 atgctagcaacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaat 11135856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 28274791 - 28274847
Alignment:
Q  392 ctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaa 448  Q
    |||| |||||||  |||||||||||||||||| || ||||||| ||||| |||||||    
T  28274791 ctagggacactctcttttcaacactctctctaacactcactctcttattggatgaaa 28274847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 9e-31; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 383 - 471
Target Start/End: Original strand, 45554563 - 45554651
Alignment:
Q  383 tgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttg 471  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||    
T  45554563 tgaagaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactttg 45554651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 388 - 473
Target Start/End: Original strand, 9470082 - 9470167
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgtt 473  Q
    ||||||||| | |||||||||||||| ||||||||| || ||||||||||||| |||||||||||| |||||||||||||||||||    
T  9470082 aatgctagcaatactcatttttcaacgctctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtt 9470167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 26767941 - 26767856
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| ||||||||| ||||||||||| | ||||||||| | |||||||||||| ||||||||||||||||||    
T  26767941 gaatgctagcaacactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgtatgtcccaccactttgt 26767856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 28898217 - 28898134
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| |||||| ||||| | |||||||||||||| ||||||||||||| | |||||||||| ||||||||||||||||    
T  28898217 gaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccacttt 28898134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 3804585 - 3804659
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtccc 462  Q
    ||||||||| ||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||    
T  3804585 aatgctagctacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatgtccc 3804659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 12989191 - 12989276
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| ||||||||||||||| |  || ||||||||| ||| |||||||||||| ||||||||||||||||||    
T  12989191 gaatgctagcaacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgt 12989276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 388 - 472
Target Start/End: Complemental strand, 6980299 - 6980215
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||| ||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||  ||||| | ||||||||||    
T  6980299 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgt 6980215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 42182889 - 42182972
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||||||  |||| | |||||||||||||| ||||||||||||| | |||||||||| ||||||||||||||||    
T  42182889 gaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccacttt 42182972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 381 - 455
Target Start/End: Original strand, 11539417 - 11539491
Alignment:
Q  381 tttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatat 455  Q
    ||||| |||||||| | |||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||||    
T  11539417 tttgaggaatgctaacaacactcatttttgaacactctttctagcactcactcttttattggatgaaatcaatat 11539491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 16719609 - 16719531
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    ||||||||| ||||||| ||||||||||| ||| |||||   |||||||||||||||||||||||| ||| ||||||||    
T  16719609 aatgctagcaacactcacttttcaacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccacca 16719531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 460
Target Start/End: Complemental strand, 25666762 - 25666700
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtc 460  Q
    |||||||||||||||||||||||| | |||||||||||||||  |||||||||||| ||||||    
T  25666762 acactcatttttcaacactctctcaaacattcactcttttatcggatgaaatcaatgtatgtc 25666700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 464
Target Start/End: Complemental strand, 18511389 - 18511312
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccac 464  Q
    |||||||||| ||||||| |||| ||||||||| ||| || ||||||||||||| ||| |||||||| ||||||||||    
T  18511389 gaatgctagcaacactcactttttaacactctcactatcactcactcttttattggataaaatcaatgtatgtcccac 18511312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 388 - 472
Target Start/End: Original strand, 44274236 - 44274319
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||| ||||||| |||  | ||||||||||| |||||||||||| ||| ||| |||||||| ||||||||||||||||||    
T  44274236 aatgctagcaacactcactttg-agcactctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgt 44274319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 460
Target Start/End: Original strand, 19639107 - 19639166
Alignment:
Q  401 ctcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtc 460  Q
    |||| |||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  19639107 ctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtc 19639166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 460
Target Start/End: Original strand, 19837700 - 19837759
Alignment:
Q  401 ctcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtc 460  Q
    |||| |||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  19837700 ctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtc 19837759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 41546207 - 41546125
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||||  |||||  |||||||||||||||| | |||||||||| ||||| |||| |||||||||||||||| |||||||    
T  41546207 gaatgctagcatcactctcttttcaacactctctcaaacattcactctcttattggatg-aatcaatatatgtcccgccacttt 41546125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 1107039 - 1107121
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| |||| ||||||  |||| | ||||||||||||||  |||||||||||| | |||||||||| ||||||||||||||||    
T  1107039 aatgttagcaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccacttt 1107121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 470
Target Start/End: Complemental strand, 4964860 - 4964770
Alignment:
Q  380 ttttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||| |||||||||| ||| ||  |||| |  ||||||||||||| ||||| ||||||| | |||||||||| ||||||||||||||||    
T  4964860 ttttgaggaatgctagcaacattctcttttgagtactctctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccacttt 4964770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 473
Target Start/End: Complemental strand, 4603046 - 4602961
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgtt 473  Q
    |||| |||| ||||||| |||||||| ||| || | | | ||||||||||||| |||||||||||||||||| ||| |||||||||    
T  4603046 aatgttagcaacactcacttttcaacgctccctttggtactcactcttttattggatgaaatcaatatatgttccatcactttgtt 4602961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 28898027 - 28898100
Alignment:
Q  380 ttttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    ||||||||||||||||| ||||||  |||| |  ||||||| ||||| ||||||||||||| ||||||||||||    
T  28898027 ttttgaagaatgctagcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaat 28898100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 470
Target Start/End: Complemental strand, 33747080 - 33747017
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| |||||||||| |||   ||||||||||||| |||||||||||||||||||||||||||||    
T  33747080 ttttgaacactctctttagacctcactcttttatt-gatgaaatcaatatatgtcccaccacttt 33747017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 472
Target Start/End: Original strand, 2122797 - 2122880
Alignment:
Q  389 atgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||| ||||||| ||||||| ||| |||||| || ||||||||| ||  |||||||||||| |||||  |||||||||||    
T  2122797 atgctagcaacactcacttttcaatactttctctatcaatcactctttcataggatgaaatcaatgtatgtatcaccactttgt 2122880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 2476547 - 2476619
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| ||||||||| |||||  |||| | ||||||||||||||| |||||||| |||||||||| |||||||    
T  2476547 acactcacttttcaacattctct--agcacttactcttttattagataaaatcaatgtatgtcccactactttgt 2476619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 461
Target Start/End: Complemental strand, 30718495 - 30718432
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcc 461  Q
    ||||||| |||| |||| ||||||||| | ||||||||||||| ||||||||| ||||||||||    
T  30718495 acactcaattttaaacattctctctagtactcactcttttattggatgaaatcgatatatgtcc 30718432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 37228499 - 37228582
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatg-aaatcaatatatgtcccaccacttt 470  Q
    ||||||||| ||||||  |||| | |||||||||||||| ||||||||||||| | || |||| ||| ||||||||||||||||    
T  37228499 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaaattaatgtatgtcccaccacttt 37228582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 41805956 - 41805873
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||||||  ||||  ||||| ||| || || ||||||||||||| ||| |||||||| ||||||||||||||||    
T  41805956 gaatgctagcaacactctattttggacactttctttaacactcactcttttattggataaaatcaatgtatgtcccaccacttt 41805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 15508909 - 15508993
Alignment:
Q  382 ttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    |||| ||||| |||| ||||||  |||| |||||||| |||| || |||||||||||||   |||||||||| ||||||||||||    
T  15508909 ttgaggaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccacca 15508993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 470
Target Start/End: Complemental strand, 36472007 - 36471935
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||| |||||||||||||||||  || ||| ||| ||||| |||||||||||  |||||| |||||||||    
T  36472007 acactcacttttcaacactctctctgacactcaatctcttattggatgaaatcaaagtatgtctcaccacttt 36471935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 472
Target Start/End: Complemental strand, 37652420 - 37652340
Alignment:
Q  392 ctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||| |||||||  |||||||||| | | ||||| | ||| |||||||||||||||||||| ||||| ||||| ||||||    
T  37652420 ctagcaacactcacatttcaacactttttttagcacttacttttttattagatgaaatcaatgtatgttccacccctttgt 37652340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 470
Target Start/End: Complemental strand, 42579814 - 42579754
Alignment:
Q  410 caacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||| | || ||||||||||||| |||||||||||||||| || || ||||||    
T  42579814 caacactctctcaaacactcactcttttattggatgaaatcaatatatatctcatcacttt 42579754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 1110198 - 1110281
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||||||  |||  | || |||||||| || |||||||||||||   |||||||||| ||||||||||||||||    
T  1110198 gaatgctagcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatcaatgtatgtcccaccacttt 1110281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 453
Target Start/End: Original strand, 37719834 - 37719900
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||||||||| ||| ||  |||| | |||||| ||||||| ||||||||||||| ||||||||||||    
T  37719834 gaatgctagcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaat 37719900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 12099047 - 12098962
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||| |||| ||||||  ||||||||  ||||| |||||||| || ||||||| |||||||||||  |||||| | |||||||||    
T  12099047 gaatgttagcaacactctcttttcaactttctctttagcattcgctattttatttgatgaaatcaaagtatgtctcgccactttgt 12098962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 453
Target Start/End: Complemental strand, 1110375 - 1110315
Alignment:
Q  393 tagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||| |||||| ||||| | |||||| |||| |||||||||||||||| | ||||||||||    
T  1110375 tagcaacactcttttttgagcactctttctaacattcactcttttattgggtgaaatcaat 1110315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 470
Target Start/End: Original strand, 8009532 - 8009596
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| |||||||| |||| || ||||| |||| || ||||||||||| ||||||| |||||||||    
T  8009532 ttttgaacactctttctaacactcacttttttgttggatgaaatcaacatatgtctcaccacttt 8009596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 470
Target Start/End: Original strand, 10339785 - 10339849
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| |||||||||||||||| ||||| ||||||| |   ||||||||  |||||||||||||||    
T  10339785 ttttgaacactctctctagcactcactattttattggggaaaatcaatgaatgtcccaccacttt 10339849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 472
Target Start/End: Original strand, 10981531 - 10981603
Alignment:
Q  400 actcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||| |||| ||||||||||||| || ||||| || ||||  ||||||  ||| ||||||||||||||||||    
T  10981531 actcacttttgaacactctctctaacactcacttttctattgaatgaaaaaaatgtatgtcccaccactttgt 10981603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 453
Target Start/End: Complemental strand, 11729777 - 11729717
Alignment:
Q  393 tagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||| ||||||| ||||||||||||| |||| |||| | |||||||||  |||||||||||    
T  11729777 tagcaacactcacttttcaacactctttctaacatttattcttttattgaatgaaatcaat 11729717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 470
Target Start/End: Original strand, 32701485 - 32701553
Alignment:
Q  402 tcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||||||||| | | |||||   ||||||||||| ||| |||||||| ||| ||||||||||||    
T  32701485 tcatttttcaacactttttttagcaactactcttttattggataaaatcaatgtatatcccaccacttt 32701553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 470
Target Start/End: Original strand, 43400152 - 43400216
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||||||||| || ||||| | ||||| |||||||  | | ||||||||||||||||    
T  43400152 ttttcaacactctctctaacactcactttcttattggatgaaactagtgtatgtcccaccacttt 43400216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 6e-29; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 388 - 473
Target Start/End: Original strand, 34905337 - 34905422
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgtt 473  Q
    ||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||||||||| |||||||||||||||||||    
T  34905337 aatgctagcaacactcatttttcaacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtt 34905422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 445818 - 445903
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| | ||||||||||||||||| ||||||||| ||||| ||||||| |||||||||||| |||||| |||||||||||    
T  445818 gaatgctagcaatactcatttttcaacactatctctagcactcacttttttattggatgaaatcaatgtatgtcacaccactttgt 445903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 472
Target Start/End: Complemental strand, 31116293 - 31116219
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| |||| ||||||||||||| ||||||||||| |||| |||||||||||| |||||||||| |||||||    
T  31116293 acactcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgt 31116219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 470
Target Start/End: Complemental strand, 35128900 - 35128820
Alignment:
Q  390 tgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||| ||||||  |||| |||||||||||||||| ||||||||||||| | | |||||||| ||||||||||||||||    
T  35128900 tgctagcaacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccaccacttt 35128820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 5106309 - 5106383
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| ||||||||||| |||||| || ||||| ||||||| ||| |||||||| ||||||||||||||||||    
T  5106309 acactcacttttcaacactttctctaacactcacttttttattggataaaatcaatgtatgtcccaccactttgt 5106383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 470
Target Start/End: Complemental strand, 10133341 - 10133255
Alignment:
Q  384 gaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| |||  ||||||| |||||||||||||||||| || |||||| |||||| |||||||| | | ||||||||||||||||    
T  10133341 gaagaatggtagaaacactcacttttcaacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccacttt 10133255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 473
Target Start/End: Original strand, 2675901 - 2675981
Alignment:
Q  393 tagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgtt 473  Q
    |||| ||||||||||||||||| | | | || ||||||||||||||||  ||||| ||||| |||||||||||||||||||    
T  2675901 tagcaacactcatttttcaacattttttttaacattcactcttttattgaatgaattcaatgtatgtcccaccactttgtt 2675981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 8442017 - 8441953
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatca 451  Q
    ||||||||||  ||||||||||||||||||||||||| || |||||| |||||| ||||||||||    
T  8442017 gaatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaatca 8441953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 8450821 - 8450757
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatca 451  Q
    ||||||||||  ||||||||||||||||||||||||| || |||||| |||||| ||||||||||    
T  8450821 gaatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaatca 8450757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 19090395 - 19090312
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| | ||||||  |||| | ||||||||||||||  |||||||||||| | |||||||||| ||||||||||||||||    
T  19090395 gaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccacttt 19090312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 472
Target Start/End: Original strand, 32122796 - 32122880
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| | ||||||  ||||||||||||| || | || |||||  |||||| ||||||||||||||||||||||||| |||||    
T  32122796 aatgctaacaacactctcttttcaacactctttccaccactcacttatttattggatgaaatcaatatatgtcccaccattttgt 32122880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 470
Target Start/End: Original strand, 4595766 - 4595825
Alignment:
Q  411 aacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||||||| |||||||||||||   |||||||||| |||||| |||||||||    
T  4595766 aacactctctctagcactcactcttttattgagtgaaatcaatgtatgtctcaccacttt 4595825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 6531478 - 6531395
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||||||  |||| |  |||||||| |||| ||||||||||||| | |||||||||| |||||||||| |||||    
T  6531478 gaatgctagcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaatgtatgtcccactacttt 6531395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 10060859 - 10060942
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||||||  |||| |||||||| | || || ||||||||||||||  |||||||||| |||||||| |||||||    
T  10060859 gaatgctagcaacactctcttttgaacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccacttt 10060942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 21987292 - 21987375
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| | ||| ||| ||||  ||||||||| ||||| ||||| ||||||| |||||||||||| ||| ||||||||||||    
T  21987292 gaatgctaacaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatatcccaccacttt 21987375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 472
Target Start/End: Original strand, 2931580 - 2931646
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||||||||||| ||||| ||  |||||| |||||||||||| ||||||| |||| |||||    
T  2931580 ttttcaacactctctctatcattcgcttatttatttgatgaaatcaatgtatgtcctaccattttgt 2931646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 472
Target Start/End: Complemental strand, 12327362 - 12327300
Alignment:
Q  410 caacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||||||||| ||||||||||||| |||  ||||||| ||||||| |||| |||||    
T  12327362 caacactctctctagcagtcactcttttattggatagaatcaatgtatgtcctaccattttgt 12327300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 12753940 - 12753855
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| |||| |||||||| | ||||| ||||||||| ||| ||| ||||  ||  |||||||||||||||||    
T  12753940 gaatgctagcaacactcacttttgaacactctttatagcaatcactctttcattggataaaatacatgcatgtcccaccactttgt 12753855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 451
Target Start/End: Complemental strand, 17226685 - 17226645
Alignment:
Q  411 aacactctctctagcattcactcttttattagatgaaatca 451  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  17226685 aacactctctttagcattcactcttttattggatgaaatca 17226645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 12690252 - 12690335
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||| |||||||  |||| ||||||||||||| || |  |||||||||| |||||||| |||  ||||| |||||||||    
T  12690252 gaatgctagggacactctattttaaacactctctctaacacttgctcttttattggatgaaattaatgcatgtctcaccacttt 12690335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 453
Target Start/End: Original strand, 19090212 - 19090278
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||||||||| ||||||  |||| | |||||||||||||| ||||||||||||| | |||| |||||    
T  19090212 gaatgctagcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaat 19090278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 472
Target Start/End: Complemental strand, 16852105 - 16852068
Alignment:
Q  435 tttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  16852105 tttattagatgaaataaatgtatgtcccaccactttgt 16852068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 472
Target Start/End: Original strand, 31443963 - 31444044
Alignment:
Q  391 gctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||| ||| | ||||||||||||||| | || || ||| ||||||||| |||||||| ||| ||||| |||||| |||||    
T  31443963 gctagcaacaataatttttcaacactctttttaacactcattcttttattggatgaaattaatttatgttccaccattttgt 31444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 466
Target Start/End: Original strand, 3030521 - 3030581
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    ||||||||||||||||||  ||||||||| ||||| |||||||  | | ||||||||||||    
T  3030521 ttttcaacactctctctaatattcactctgttattggatgaaactattgtatgtcccacca 3030581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 374 - 472
Target Start/End: Complemental strand, 28414062 - 28413964
Alignment:
Q  374 aatattttttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||| ||||||||||| | ||||||| ||||||||||||||||||||  ||||| ||||||| |||||||||||| ||||||||||||||||||    
T  28414062 aatatttttcgaagaatgctaacaacactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgtatgtcccaccactttgt 28413964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 472
Target Start/End: Original strand, 8903848 - 8903937
Alignment:
Q  383 tgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||| |||| ||||||||||||||||||||||||||| | |||||  |||||| |||||||||||| ||||||||||||||||||    
T  8903848 tgaagaatgttagcaacactcatttttcaacactctctctagtactcacttgtttatttgatgaaatcaatgtatgtcccaccactttgt 8903937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 388 - 472
Target Start/End: Original strand, 32072098 - 32072182
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||| ||| ||| ||||||||||||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||    
T  32072098 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgt 32072182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 34861365 - 34861282
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||  | |||| |||||||||||||||  |||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  34861365 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgtatgtcccaccactttgt 34861282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 1977353 - 1977268
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| | ||||| |||| |||||||||||||||| |||||||| | || |||||||||||| ||||||| ||||||||||    
T  1977353 gaatgctagcaatactcactttttaacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgt 1977268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 5979880 - 5979965
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||| | ||||||||||||||||||| |  ||||||| |||| ||||| |||||| ||||||||||||||||||    
T  5979880 gaatgctagcaacacttacttttcaacactctctctagtagacactcttctattggatgagatcaatgtatgtcccaccactttgt 5979965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 35151909 - 35151824
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| ||||| ||||||| |||| |||||||| | ||||||| ||||||||||| |||||||||||| |||||||||||| |||||    
T  35151909 gaatactagcaacactcactttttaacactctttttagcatttactcttttattggatgaaatcaatgtatgtcccaccattttgt 35151824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 406 - 472
Target Start/End: Complemental strand, 9952918 - 9952852
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||||||||||||| ||| | ||||||| ||||||||||||  |||||||||||||||||    
T  9952918 ttttcaacactctctctagcactcatttttttattggatgaaatcaatgcatgtcccaccactttgt 9952852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 410 - 472
Target Start/End: Complemental strand, 17499390 - 17499328
Alignment:
Q  410 caacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||| |||||    
T  17499390 caacactctctctagcactctatcttttattggatgaaatcaatatatgtcccaccattttgt 17499328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 472
Target Start/End: Complemental strand, 24056094 - 24056020
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| |||||||| |||||| ||||| || ||||||||| ||||||||| ||| ||||||||||||||||||    
T  24056094 acactcacttttcaacgctctctttagcactcgctcttttatcagatgaaattaatgtatgtcccaccactttgt 24056020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 41727441 - 41727515
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| |||| |||||||||| ||||| |||||||||| |||||| |||||||| ||||||||||| ||||||    
T  41727441 acactcacttttgaacactctctttagcaatcactcttttgttagataaaatcaatgtatgtcccaccgctttgt 41727515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 16983394 - 16983479
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| ||||||||||||| ||||||| |||||  |||||| ||| |||||| | ||||||||| ||||||||    
T  16983394 gaatgctagcaacactcacttttcaacactctatctagcactcactgatttattggataaaatcattttatgtcccatcactttgt 16983479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 35689506 - 35689563
Alignment:
Q  413 cactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||||| ||||| ||||||| |||||||||||| ||||||||||||||||    
T  35689506 cactctctctagcactcacttttttattggatgaaatcaatgtatgtcccaccacttt 35689563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 7599602 - 7599519
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||| |||| |||||| ||||| ||||||||||||||||   ||||||||||| |||||||||||| ||| ||||| ||||||    
T  7599602 gaatgttagcaacactcttttttgaacactctctctagcacctactcttttattggatgaaatcaatgtatatcccagcacttt 7599519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 23685131 - 23685214
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||| ||| ||||  |||||||||  |||| ||||| ||||||| |||||||||||| ||||||||||||||||    
T  23685131 gaatgctagcaacattcacttttgcacactctcttaagcactcactattttattggatgaaatcaatgtatgtcccaccacttt 23685214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 418 - 472
Target Start/End: Original strand, 35797426 - 35797480
Alignment:
Q  418 tctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||    
T  35797426 tctctagcattcactcttttattggataaaatcaatgtatgttccaccactttgt 35797480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 8914771 - 8914856
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| |||| | | ||||||||| || ||||||||| ||| ||| ||| |||| ||||||||||||||||||    
T  8914771 gaatgctagcaacactcacttttgagcgctctctctaacactcactctttcattggataaaaccaatgtatgtcccaccactttgt 8914856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 31301126 - 31301200
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| |||| |||||| | ||  ||| ||||||||||||| |||||||||||| ||||| ||||||||||||    
T  31301126 acactcacttttgaacactatttccggcactcactcttttattggatgaaatcaatgtatgttccaccactttgt 31301200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 470
Target Start/End: Original strand, 1205829 - 1205910
Alignment:
Q  389 atgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| ||||||  |||| | |||||||| ||||| ||||||||||||||| | |||| ||| |||||| |||||||||    
T  1205829 atgctagcaacactctcttttgagcactctctttagcactcactcttttattaggtaaaattaatgtatgtctcaccacttt 1205910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 1423746 - 1423831
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcatt--cactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| ||||| ||||||| ||||||||||||| |  || |||  |||||||||||||||| |||||||| ||||||| ||||||||||    
T  1423746 gaatactagcaacactcacttttcaacactcttt--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgt 1423831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 459
Target Start/End: Original strand, 36629659 - 36629731
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgt 459  Q
    |||||||| | | |||||||||| |||||| ||| ||||| | |||||||||||||||||||| ||| |||||    
T  36629659 gaatgctaacaatactcatttttgaacactatctttagcacttactcttttattagatgaaataaatgtatgt 36629731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 12212126 - 12212188
Alignment:
Q  391 gctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||||| ||||||  ||||||||| |||||||| ||||||||||||| || | ||||||||||    
T  12212126 gctagcaacactctcttttcaacattctctctaacattcactcttttcttgggtgaaatcaat 12212188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 12456554 - 12456616
Alignment:
Q  391 gctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||||| ||||||  ||||||||| |||||||| ||||||||||||| || | ||||||||||    
T  12456554 gctagcaacactctcttttcaacattctctctaacattcactcttttcttgggtgaaatcaat 12456616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 448
Target Start/End: Original strand, 20545951 - 20545993
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaa 448  Q
    |||||||||||||||||| |||||||||| |||||| ||||||    
T  20545951 ttttcaacactctctctaacattcactctcttattaaatgaaa 20545993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 466
Target Start/End: Original strand, 6387591 - 6387640
Alignment:
Q  417 ctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    ||||||| || ||||||||||||| ||| |||||||| ||||||||||||    
T  6387591 ctctctaacactcactcttttattggataaaatcaatgtatgtcccacca 6387640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 11962863 - 11962782
Alignment:
Q  385 aagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    ||||| |||||||||||||| |||||||||| |||| ||  | |||||||||||||  || |||||||  ||| ||||||||    
T  11962863 aagaacgctagcgacactcacttttcaacacgctctttaatactcactcttttattgaataaaatcaaagtatatcccacca 11962782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 472
Target Start/End: Original strand, 14236330 - 14236423
Alignment:
Q  379 tttttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| ||||| || | ||||||  ||||||||||| | |||| || ||| | ||||||| || ||||| || |||||||||||||||||||    
T  14236330 tttttgaggaatgttaacaacactctcttttcaacactttttctaccactcatttttttattggaagaaattaaaatatgtcccaccactttgt 14236423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 466
Target Start/End: Complemental strand, 28212044 - 28211987
Alignment:
Q  409 tcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    ||||| |||||||||||| |||||  |||||| | ||||||||||||||||| |||||    
T  28212044 tcaacgctctctctagcactcacttatttattgggtgaaatcaatatatgtctcacca 28211987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 3099809 - 3099737
Alignment:
Q  400 actcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| |||||| ||||  | | ||| |||||||||||||| ||||||| ||||| |||||| |||||    
T  3099809 actcatttttgaacactatctcccgtactcattcttttattagatggaatcaatgtatgttccaccattttgt 3099737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 13407493 - 13407425
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    |||||| |||||  |||||||||||| || | ||| ||||||| ||| |||||||| ||||||||||||    
T  13407493 acactcttttttggacactctctctaacactaacttttttattggataaaatcaatgtatgtcccacca 13407425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 13856553 - 13856509
Alignment:
Q  409 tcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    ||||||||||||||| ||  |||||||||||| ||||||||||||    
T  13856553 tcaacactctctctaacacccactcttttattggatgaaatcaat 13856509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 470
Target Start/End: Complemental strand, 27799367 - 27799303
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||| | |||||| |  ||||||||||||| |||||||  ||| ||||||||||||||||    
T  27799367 ttttcaacaatttctctaacgatcactcttttatttgatgaaactaatgtatgtcccaccacttt 27799303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 32023013 - 32022941
Alignment:
Q  397 gacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactt 469  Q
    ||||||||||||| |||||||||| || |||||| |||||||||  || |||| ||| |||| | ||||||||    
T  32023013 gacactcatttttaaacactctctttaacattcaatcttttattgaataaaattaatgtatgcctcaccactt 32022941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 22189939 - 22190024
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||    
T  22189939 gaatgctagaaacactcatttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgt 22190024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 388 - 472
Target Start/End: Original strand, 11824072 - 11824156
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| |||| |||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||    
T  11824072 aatgttagcaacactcatttttcaacgctctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccattttgt 11824156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 14795128 - 14795210
Alignment:
Q  384 gaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    ||||||||||||| ||||||| |||||||||||||||||| || ||||| ||||||| |||||||||||| ||||||||||||    
T  14795128 gaagaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccacca 14795210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 15242120 - 15242202
Alignment:
Q  384 gaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    ||||||||||||| ||||||| |||||||||||||||||| || ||||| ||||||| |||||||||||| ||||||||||||    
T  15242120 gaagaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccacca 15242202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 17749695 - 17749777
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||||||| |||||  |||||||||||| || ||||||||||||| ||| |||||||||||||||||||||||||    
T  17749695 aatgctagcgacactcttttttggacactctctctaacactcactcttttattggataaaatcaatatatgtcccaccacttt 17749777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 382 - 472
Target Start/End: Original strand, 33008099 - 33008189
Alignment:
Q  382 ttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| |||||||||| ||||||| |||| |||||| ||||||||| ||||||||||||| |||||||||| | ||||||||||||||||||    
T  33008099 ttgaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccaccactttgt 33008189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 403 - 472
Target Start/End: Original strand, 7775016 - 7775085
Alignment:
Q  403 catttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  7775016 catttttcaacactctctatagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgt 7775085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 406 - 472
Target Start/End: Original strand, 12271005 - 12271071
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||    
T  12271005 ttttcaacactctctatagcatccactcttttatcagatgaaatcaatgtatgtcccaccactttgt 12271071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 24539302 - 24539220
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||||||||||  ||||  |||||||||||| || ||||||||||||| ||| |||||||||||||||||||||||||    
T  24539302 aatgctagcgacactctcttttggacactctctctaacactcactcttttattggataaaatcaatatatgtcccaccacttt 24539220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 19423017 - 19422936
Alignment:
Q  384 gaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacc 465  Q
    |||||||| |||| ||||||| |||||||||||||||||| || ||||||||| ||| |||||||||||| |||||||||||    
T  19423017 gaagaatgttagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatgtatgtcccacc 19422936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 31502644 - 31502559
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| ||||||||| |||||||| || ||||||||||||| |||||||||||  |||||||||||| |||||    
T  31502644 gaatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgt 31502559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 17354707 - 17354624
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| |||||| ||||| | ||||||||||| || ||| ||||||||| |||||||||||| ||||||||||||||||    
T  17354707 gaatgctagcaacactcttttttgagcactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccacttt 17354624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 472
Target Start/End: Complemental strand, 8073457 - 8073383
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||||||||| |||  |||||| ||||||||||||  |||||||||||| ||||||||||||||||||    
T  8073457 acactcatttttcaacattcttcctagcactcactcttttatcggatgaaatcaatgtatgtcccaccactttgt 8073383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 9111499 - 9111431
Alignment:
Q  402 tcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| |||||||| | |||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  9111499 tcattttttaacactctatttagcattcactcttttattagatgaaatcaatctatatcctaccacttt 9111431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 384 - 472
Target Start/End: Complemental strand, 32213052 - 32212964
Alignment:
Q  384 gaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||||  ||||||| |||| |||||||||||||||| ||  ||||||||| |||||||||||| |||||| ||| |||||||    
T  32213052 gaagaatgctagtaacactcactttttaacactctctctagcactctatcttttattggatgaaatcaatgtatgtctcactactttgt 32212964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 22786151 - 22786234
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||||||  |||| | |||||||||||||| ||||| ||||||||| |||||||||| |||||| |||||||||    
T  22786151 gaatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgtatgtctcaccacttt 22786234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 472
Target Start/End: Complemental strand, 12263621 - 12263531
Alignment:
Q  382 ttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| ||| |||||| ||||| | |||||||||||||||||| ||| |||||||||||  |||| ||||||| ||||||||| ||||||||    
T  12263621 ttgaggaacgctagcaacacttacttttcaacactctctctatcatccactcttttatcggatggaatcaatgtatgtcccatcactttgt 12263531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 406 - 472
Target Start/End: Complemental strand, 44511097 - 44511031
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||| |||||| || ||||||||    
T  44511097 ttttcaacactctctctagcactcacttttttattggatgaaatcaatgtatgtctcatcactttgt 44511031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 472
Target Start/End: Original strand, 6442159 - 6442250
Alignment:
Q  381 tttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||| ||||| || | |||||||||||||||||||||||||| || ||| || ||||||  ||||||||||| ||||| |||||| |||||    
T  6442159 tttgaggaatgttaacaacactcatttttcaacactctctctatcactcagtcatttattgtatgaaatcaatgtatgttccaccattttgt 6442250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 32205079 - 32205161
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| |||| |||||||||||||    ||||||||||||| |||||||||||| ||||||| |||| |||||    
T  32205079 gaatgctagcaacactcacttttgaacactctctctac---tcactcttttattggatgaaatcaatgtatgtcctaccattttgt 32205161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 398 - 472
Target Start/End: Complemental strand, 10934134 - 10934060
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||| ||| |||||||||||||  ||||| ||||||||| ||| |||| |||||||||| |||||||||||    
T  10934134 acactcatgttttaacactctctctattattcattcttttattggataaaattaatatatgtctcaccactttgt 10934060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 13919781 - 13919863
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||| ||||||  |||| | |||||||||||||| || ||| |||||| | |||||||||| ||||||||||||||||    
T  13919781 aatgctagcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccaccacttt 13919863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 456
Target Start/End: Original strand, 19840882 - 19840951
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatata 456  Q
    |||||||||| ||||||  |||| | |||||||||||||| ||||||||||||| | |||||||||||||    
T  19840882 gaatgctagcaacactctattttgagcactctctctagcactcactcttttattgggtgaaatcaatata 19840951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 27888282 - 27888367
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| |||| | ||||||||||| || |||| || | ||| ||| |||||||| ||||||||||||||||||    
T  27888282 gaatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgt 27888367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 26703618 - 26703537
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||||||  |||| | || ||||||||||| ||||||||||||| | |||||||||| |||||| |||||||||    
T  26703618 gaatgctagcaacactc--ttttgagcattctctctagcactcactcttttattgggtgaaatcaatgtatgtctcaccacttt 26703537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 11692209 - 11692264
Alignment:
Q  417 ctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||  ||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  11692209 ctctctaatattcactcttttattggatgaaatcaatgtatgtcctaccactttgt 11692264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 27949284 - 27949358
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| |||| ||||||||||||| || |||||||| |||| |||||||||||  ||||||| |||| |||||    
T  27949284 acactcactttttaacactctctctaacactcactcttgtattggatgaaatcaagttatgtcctaccattttgt 27949358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 45909481 - 45909539
Alignment:
Q  413 cactctctctagcattcactctttt-attagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||| ||||||||||||||||| ||| | |||||||||| ||||||||||||||||    
T  45909481 cactctccctagcattcactctttttattgggtgaaatcaatgtatgtcccaccacttt 45909539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 453
Target Start/End: Original strand, 27320226 - 27320291
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    ||||||||| ||| |||||||||||||||||||| | || |||||||||||||  || ||||||||    
T  27320226 aatgctagcaacattcatttttcaacactctctccaacactcactcttttattgaataaaatcaat 27320291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 9648922 - 9649009
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagat--gaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||||| |||||||||| || ||||||| ||||| ||||| ||| ||| |||   |||||||| ||||| ||||||||||||    
T  9648922 gaatgctagcgatactcatttttaaatactctctgtagcactcactatttaattggataaaaaatcaatgtatgttccaccactttgt 9649009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 10619408 - 10619456
Alignment:
Q  405 tttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    ||||| |||| ||||||||||||| ||||||||||||| ||||||||||    
T  10619408 ttttttaacattctctctagcatttactcttttattaggtgaaatcaat 10619456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 14759670 - 14759726
Alignment:
Q  414 actctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||| |||||| |||||||||||||   |||||||||| ||||||||||||||||    
T  14759670 actctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccacttt 14759726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 19494488 - 19494436
Alignment:
Q  418 tctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||| | ||||||||||||| | |||||||||| ||||||||||||||||    
T  19494488 tctctagtactcactcttttattgggtgaaatcaatgtatgtcccaccacttt 19494436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 457
Target Start/End: Complemental strand, 36845703 - 36845631
Alignment:
Q  385 aagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatat 457  Q
    ||||||| |||| ||| ||||||||||||||| ||| || |  |||||||||||||  |||||||||||||||    
T  36845703 aagaatgttagcaacattcatttttcaacactttctttatcgctcactcttttattgaatgaaatcaatatat 36845631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 472
Target Start/End: Original strand, 39254084 - 39254168
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||| ||| ||| ||||||||| ||||| ||||| |||||||||||||  || |||| ||| |||||  |||||||||||    
T  39254084 aatgctagcaacattcacttttcaacattctctatagcactcactcttttattgaataaaattaatgtatgtttcaccactttgt 39254168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 25428659 - 25428576
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||||||  |||| | |||||| | ||| | |||||||||||||   |||||||||| ||||||||||||||||    
T  25428659 gaatgctagcaacactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaatgtatgtcccaccacttt 25428576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 453
Target Start/End: Complemental strand, 13919963 - 13919897
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||||||||| ||||||  |||| | |||||||||||||| |||||| |||||| | ||||||||||    
T  13919963 gaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaat 13919897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 14759838 - 14759764
Alignment:
Q  375 atattttttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaat 449  Q
    |||||||| || |||||||||| ||||||  |||| | ||||||| ||||||  |||||||||||| ||||||||    
T  14759838 atatttttcgaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaat 14759764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 418 - 472
Target Start/End: Complemental strand, 17813923 - 17813870
Alignment:
Q  418 tctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||| |||||||||||||| | ||||||||| |||| |||||||||||||    
T  17813923 tctctagcactcactcttttattaaaagaaatcaatgtatg-cccaccactttgt 17813870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 470
Target Start/End: Original strand, 23434693 - 23434779
Alignment:
Q  384 gaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||| ||||||| ||||||||||||||||  | || ||| ||| ||||| ||| ||| |||| ||||  ||||||||||    
T  23434693 gaagaatgctagggacactcctttttcaacactctcttcaacactcattctcttattggataaaaccaatgtatgatccaccacttt 23434779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 430 - 472
Target Start/End: Original strand, 28713059 - 28713101
Alignment:
Q  430 actcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||||  |||||||||||||||||| |||||||||||    
T  28713059 actcttttattgaatgaaatcaatatatgtctcaccactttgt 28713101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 461
Target Start/End: Original strand, 31874047 - 31874105
Alignment:
Q  401 ctcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcc 461  Q
    ||||||||| ||||||||||  |||| ||||| ||||||| |||||||||||| |||||||    
T  31874047 ctcattttttaacactctct--agcactcacttttttattggatgaaatcaatgtatgtcc 31874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 470
Target Start/End: Complemental strand, 46994505 - 46994460
Alignment:
Q  425 cattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||| | |||||||||||||||||||| |||| |||||||||||    
T  46994505 cattcatttttttattagatgaaatcaatgtatgacccaccacttt 46994460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 470
Target Start/End: Complemental strand, 19841030 - 19840982
Alignment:
Q  422 tagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||||||||||||| | |||||||||| ||||||  ||||||||    
T  19841030 tagcattcactcttttattggttgaaatcaatgtatgtcttaccacttt 19840982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 472
Target Start/End: Complemental strand, 25092840 - 25092756
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| | ||||||| |||||||||||||||   |||  |||||||| ||| |||| ||||||| ||||||| || |||||||    
T  25092840 aatgctaacaacactcacttttcaacactctcttccgcacccactctttcatttgatgcaatcaatgtatgtcctactactttgt 25092756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 470
Target Start/End: Original strand, 32055595 - 32055659
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| |||||| |||||| || | |||| |||||| |||||||||| | ||||||||||||||||    
T  32055595 ttttgaacactatctctaacactaactcatttattggatgaaatcattttatgtcccaccacttt 32055659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 28529253 - 28529334
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccact 468  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  28529253 gaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccact 28529334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 5452240 - 5452155
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| ||||||||||||||| || |||||||||||||||| |||||||||||| ||| ||||||||||||||    
T  5452240 gaatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgt 5452155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 37776883 - 37776798
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  37776883 gaatgctagcaacactcacttttcaacactttctccagcactcactcttttattagatgaaatcaatgtatgtcctaccactttgt 37776798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 20493625 - 20493540
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| |||||||||||||||||| || |||||| |||||| |||||||||||| ||||||| ||||||||||    
T  20493625 gaatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgt 20493540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 381 - 470
Target Start/End: Original strand, 46450061 - 46450148
Alignment:
Q  381 tttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||| |||||||||| ||||||| |||| ||||||||||  |||| |||||||||||||||||| ||||||| ||||||||||||||||    
T  46450061 tttgaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattagatggaatcaatgtatgtcccaccacttt 46450148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 14236019 - 14236102
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| | ||||| ||||||  ||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  14236019 gaatgctaccaacacttatttttgcacactctctttagcactcactattttattggatgaaatcaatatatgtcccaccacttt 14236102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 46160949 - 46161032
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| |||| ||||||||||  |||| ||||||||||||| ||||||||||||| |||||| ||||||||||    
T  46160949 gaatgctagcaacactcacttttgaacactctct--agcactcactcttttattggatgaaatcaatacatgtccgaccactttgt 46161032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 24734705 - 24734790
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| ||||| ||||||| ||||||||||  ||||||| | ||||||||||||| |||||||||||  ||||||||||||||||||    
T  24734705 gaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgt 24734790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 41452075 - 41451990
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| ||||| ||||||| ||||||||||  ||||||| | ||||||||||||| |||||||||||  ||||||||||||||||||    
T  41452075 gaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgt 41451990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 46237200 - 46237143
Alignment:
Q  413 cactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  46237200 cactctctctagcaatcactcttttattggatgaaatcaatgtatgtcccaccacttt 46237143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 8825148 - 8825080
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    ||||||| ||||||||  ||||||||| | |||| ||||||||||||||||||||||||||||||||||    
T  8825148 acactcacttttcaaccatctctctagtactcacccttttattagatgaaatcaatatatgtcccacca 8825080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 466
Target Start/End: Complemental strand, 26310607 - 26310547
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||| ||||||||||||    
T  26310607 ttttcaacactctctctagcacttactcttttattggatgaaatcaatgtatgtcccacca 26310547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 470
Target Start/End: Original strand, 27243047 - 27243128
Alignment:
Q  389 atgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| ||||||  |||| ||||||||||||| || ||||||||||||| ||| ||||||||  |||||||||||||||    
T  27243047 atgctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccacttt 27243128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 20791296 - 20791379
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||  ||| ||||  ||||||||| ||||| ||||| ||||||| |||||||||||| ||||||||||||||||    
T  20791296 gaatgctagcaacgttcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccacttt 20791379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 37600310 - 37600227
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| | ||||||  |||| | ||||||||||||||  |||||||||||| | |||||||||| ||||||||||||||||    
T  37600310 gaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccacttt 37600227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 43657150 - 43657093
Alignment:
Q  413 cactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| ||||||||| ||||| ||||||| |||||||||||| ||||||||||||||||    
T  43657150 cactttctctagcactcactattttatttgatgaaatcaatgtatgtcccaccacttt 43657093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 470
Target Start/End: Complemental strand, 50661700 - 50661619
Alignment:
Q  389 atgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| ||| ||||||  |||| ||||||||||||| || | ||||||||||||||| ||||||||  |||||||||||||||    
T  50661700 atgcaagcaacactctcttttaaacactctctctaacacttactcttttattagataaaatcaatgcatgtcccaccacttt 50661619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 54141047 - 54140990
Alignment:
Q  413 cactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||||| |||||| |||||| | |||||||||| ||||||||||||||||    
T  54141047 cactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccaccacttt 54140990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 470
Target Start/End: Complemental strand, 10769910 - 10769822
Alignment:
Q  382 ttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| |||||||||| ||||||  |||| | ||||||||||| ||   ||||||||||| | |||||||||| ||||||||||||||||    
T  10769910 ttgaggaatgctagcaacactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaatgtatgtcccaccacttt 10769822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 472
Target Start/End: Complemental strand, 40716041 - 40715957
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| |||| ||||||| ||||||||||||||||||||| ||||||||||||  | |||||| ||| |||| | || ||||||||    
T  40716041 aatgttagcaacactcacttttcaacactctctctagcactcactcttttatatggtgaaattaatgtatgactcatcactttgt 40715957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 3313985 - 3314027
Alignment:
Q  411 aacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||||||||| ||||||||||| ||||||||||||||||||||    
T  3313985 aacactctctttagcattcactattttattagatgaaatcaat 3314027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 13809083 - 13809160
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    ||||||||| ||||||  ||||  |||||||||||| | |||||||||||||| ||| |||||||| ||||||||||||    
T  13809083 aatgctagcaacactctcttttacacactctctctaac-ttcactcttttattggataaaatcaatgtatgtcccacca 13809160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 29389193 - 29389108
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| |||| | ||||| || || || ||||||||| |||  || |||||||| ||||||||||||||||||    
T  29389193 gaatgctagcaacactcacttttgagcactcactttaacactcactctttcattgaataaaatcaatgtatgtcccaccactttgt 29389108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 48351436 - 48351521
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||| | ||||||| |||| |||||||||| ||  |  |||||||||||| ||| ||||||||||||||| ||| |||||||    
T  48351436 gaatgctaacaacactcagtttttaacactctctttaagacacactcttttattggataaaatcaatatatgtctcactactttgt 48351521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 464
Target Start/End: Complemental strand, 52124136 - 52124059
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccac 464  Q
    |||||||||| ||||||| |||| ||| |||||||||||| |||||  ||| || |||||||| ||| ||||||||||    
T  52124136 gaatgctagcaacactcactttttaacgctctctctagcactcacttatttgttggatgaaattaatgtatgtcccac 52124059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 138793 - 138848
Alignment:
Q  417 ctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| |||||||||||||  ||||||||||| |||||| ||||| |||||    
T  138793 ctctctagcactcactcttttattgaatgaaatcaatgtatgtctcaccattttgt 138848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 462
Target Start/End: Complemental strand, 7419334 - 7419283
Alignment:
Q  411 aacactctctctagcattcactcttttattagatgaaatcaatatatgtccc 462  Q
    |||||||| | ||||| ||||||||||||||||| |||| ||||||||||||    
T  7419334 aacactctatgtagcactcactcttttattagataaaataaatatatgtccc 7419283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 470
Target Start/End: Original strand, 46575948 - 46576031
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| | ||||||  | |||||||||||||| | || ||||||| ||||| | ||||| |||| ||||||||||||||||    
T  46575948 gaatgctatcaacactctctcttcaacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccacttt 46576031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 435 - 473
Target Start/End: Complemental strand, 19345132 - 19345094
Alignment:
Q  435 tttattagatgaaatcaatatatgtcccaccactttgtt 473  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  19345132 tttattggatgaaatcaatgtatgtcccaccactttgtt 19345094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 452
Target Start/End: Complemental strand, 52951537 - 52951475
Alignment:
Q  390 tgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaa 452  Q
    ||||||| ||||||  |||| |||||||||||||||| ||||||| | ||| |||||||||||    
T  52951537 tgctagcaacactctctttttaacactctctctagcactcactctctcattggatgaaatcaa 52951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 453
Target Start/End: Original strand, 54140890 - 54140956
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||||||||| ||||||  |||| | |||| ||||||||| |||||| |||||| ||||||||||||    
T  54140890 gaatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaat 54140956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 18722636 - 18722579
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagat 444  Q
    |||||||| | ||||||| ||||| ||||||||||||||| |||||  ||||||||||    
T  18722636 gaatgctaacaacactcacttttctacactctctctagcactcacttatttattagat 18722579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 453
Target Start/End: Original strand, 38928003 - 38928072
Alignment:
Q  384 gaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    ||||||||||||| ||||||  |||| | |||| |||||| || ||||||||||||| | ||||||||||    
T  38928003 gaagaatgctagcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaat 38928072  T

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Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 453
Target Start/End: Original strand, 10769748 - 10769788
Alignment:
Q  413 cactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  10769748 cactctctctagcacttactcttttatttgatgaaatcaat 10769788  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 472
Target Start/End: Complemental strand, 18427289 - 18427245
Alignment:
Q  428 tcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||| |||||| |||||||||||| |||||||||||| |||||    
T  18427289 tcactcatttattggatgaaatcaatgtatgtcccaccattttgt 18427245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 453
Target Start/End: Original strand, 24748933 - 24748973
Alignment:
Q  413 cactctctctagcattcactcttttattagatgaaatcaat 453  Q
    ||||||||||| || ||||||||||||| ||||||||||||    
T  24748933 cactctctctaacactcactcttttattggatgaaatcaat 24748973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 472
Target Start/End: Original strand, 29755489 - 29755585
Alignment:
Q  376 tattttttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| ||||| |||||||||| ||||||| ||||||||| ||||| || ||  |||||||||||   ||  |||||||||||||  ||| |||||||    
T  29755489 tattatttgaggaatgctagcaacactcacttttcaacattctctttaacacccactcttttatcgaatagaatcaatatatgtttcactactttgt 29755585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 459
Target Start/End: Complemental strand, 35094180 - 35094132
Alignment:
Q  411 aacactctctctagcattcactcttttattagatgaaatcaatatatgt 459  Q
    ||||||||||||||||||  ||||||||||  ||||||| |||||||||    
T  35094180 aacactctctctagcatttgctcttttattgaatgaaattaatatatgt 35094132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 450
Target Start/End: Original strand, 41387555 - 41387624
Alignment:
Q  379 tttttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatc 450  Q
    |||| ||| ||||||||| ||||||||| |||||||  |||||||||| |||||| |||||| ||| |||||    
T  41387555 ttttagaaaaatgctagcaacactcattattcaaca--ctctctagcactcactcatttattggattaaatc 41387624  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 49720191 - 49720103
Alignment:
Q  378 ttttttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    |||||||| ||||||||  |||||||| |||||||||||||||| | || |||||   ||||| ||| |||| ||| ||| ||||||||    
T  49720191 ttttttgaggaatgctaaggacactcacttttcaacactctctcaaacactcacttgcttattggattaaatgaatgtatatcccacca 49720103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 47237921 - 47237838
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| | ||||||  |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47237921 gaatgctatcaacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaatatatgtcccaccacttt 47237838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 465
Target Start/End: Complemental strand, 40991769 - 40991691
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacc 465  Q
    |||||||||| ||||||| |||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||    
T  40991769 gaatgctagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatatatgtcccacc 40991691  T

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Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 382 - 472
Target Start/End: Original strand, 49077244 - 49077334
Alignment:
Q  382 ttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| |||||||||| ||||||| ||||||||| ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||||||||    
T  49077244 ttgaggaatgctagcaacactcagttttcaacattctctttagcactcattcttttattagataaaattaatatatgtcccaccactttgt 49077334  T

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Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 388 - 464
Target Start/End: Original strand, 8108957 - 8109033
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccac 464  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||| ||||||||||    
T  8108957 aatgctagcaacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccac 8109033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 397 - 472
Target Start/End: Original strand, 722167 - 722242
Alignment:
Q  397 gacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||  ||||||||||||||||||    
T  722167 gacactcatctttcaacactctctctagcactcacttttttattggatgaaatcaaagtatgtcccaccactttgt 722242  T

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Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 382 - 468
Target Start/End: Original strand, 43771121 - 43771207
Alignment:
Q  382 ttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccact 468  Q
    |||||||||| |||| ||||||| |||| |||||||||||||  | ||||||||||||| |||||||||||| ||||||||||||||    
T  43771121 ttgaagaatggtagcaacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgtatgtcccaccact 43771207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 33653669 - 33653584
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| ||||||||||||||||||  | |||||| |||||| |||||||||||| |||||||||||| |||||    
T  33653669 gaatgctagcaacactcagttttcaacactctctctattaatcactcatttatttgatgaaatcaatgtatgtcccaccattttgt 33653584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 392 - 461
Target Start/End: Original strand, 20454545 - 20454614
Alignment:
Q  392 ctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcc 461  Q
    ||||| ||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  20454545 ctagcaacacttacttttcaacactctctctagcactcactcttttattagataaaatcaatgtatgtcc 20454614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 39471157 - 39471242
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||| |||| || ||||||| || ||   |||||||||||||||||||||||| ||||||||||||||||||    
T  39471157 gaatgctagcaacactcacttttaaatactctctttaacaccaactcttttattagatgaaatcaatgtatgtcccaccactttgt 39471242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 50571864 - 50571940
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtccca 463  Q
    ||||| |||| ||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||| |||| ||||    
T  50571864 gaatgttagcaacagtcacttttcaacactctctctagcacttactcttttattagatgaaatcaatgtatgcccca 50571940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 455
Target Start/End: Original strand, 40812039 - 40812105
Alignment:
Q  389 atgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatat 455  Q
    |||||||| |||||| ||||| |||||||||||||||| ||||||||||||| | ||||||||||||    
T  40812039 atgctagcaacactcttttttgaacactctctctagcactcactcttttattgggtgaaatcaatat 40812105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 34129580 - 34129495
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||| |||| ||| ||| ||||||| ||||||||||||| |||||||| |||| ||||| |||||| ||| ||||||||||||||    
T  34129580 gaatggtagcaacattcacttttcaaaactctctctagcactcactcttctattggatgagatcaatgtatatcccaccactttgt 34129495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 29699522 - 29699574
Alignment:
Q  420 tctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||    
T  29699522 tctagcactcactcttttattggatgaaatcaatacatgtcccaccactttgt 29699574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 470
Target Start/End: Complemental strand, 33996096 - 33996032
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||||||| ||||||||||||||||| || |||||||| |||||| |||||||||    
T  33996096 ttttcaacacactctctaacattcactcttttattaaatcaaatcaatgtatgtctcaccacttt 33996032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 21777000 - 21776942
Alignment:
Q  412 acactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||| |||||||||||||||| ||| |||||||| ||||||| ||||||||    
T  21777000 acactctctctaacattcactcttttattggataaaatcaatgtatgtcctaccacttt 21776942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 43958152 - 43958230
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    |||| |||| ||||||| |||| |||| |||||||||||||||||||||||||  ||  ||||||| ||||||||||||    
T  43958152 aatgttagcaacactcagtttttaacattctctctagcattcactcttttattgaatagaatcaatgtatgtcccacca 43958230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 49242181 - 49242255
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| |||| |||||||| |||| || ||||| ||| ||| |||||||||||||||||||||| ||||||||    
T  49242181 acactcacttttgaacactctatctaacagtcactttttaattggatgaaatcaatatatgtcccatcactttgt 49242255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 50164406 - 50164480
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| |||| |||||||||||||||| |||||| |||||| ||| |||||||| ||| |||||||| |||||    
T  50164406 acactcactttttaacactctctctagcactcactcatttattggataaaatcaatgtatctcccaccattttgt 50164480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 472
Target Start/End: Complemental strand, 10169822 - 10169740
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| | ||| ||| |||||||||||||||  |  ||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  10169822 aatgctaacaacattcacttttcaacactctct--aatattcactctattattggatgaaatcaatatatgtcctaccactttgt 10169740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 20225519 - 20225438
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||||||| |||| ||||||||||  |||| ||||||||||||| |||| |||| ||  |||||||||||||||    
T  20225519 gaatgctagcaacactcacttttgaacactctct--agcactcactcttttattggatggaatccatgcatgtcccaccacttt 20225438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 472
Target Start/End: Original strand, 47009202 - 47009274
Alignment:
Q  400 actcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||||||||||| ||||||| ||||||||||||| ||| |||| ||| | |||| |||| ||||||    
T  47009202 actcatttttcaacactctttctagcactcactcttttattggataaaattaatgtttgtctcaccgctttgt 47009274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 472
Target Start/End: Complemental strand, 754750 - 754675
Alignment:
Q  397 gacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||| | ||||||||||| |||||| || ||||| ||||||| |||||| ||||  ||||||||||||||||||    
T  754750 gacacttacttttcaacactttctctaacactcacttttttattggatgaactcaaagtatgtcccaccactttgt 754675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 472
Target Start/End: Original strand, 22592318 - 22592389
Alignment:
Q  401 ctcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| |||| |||| ||||||| ||| ||||||||||||| |||||||| ||| | ||||||||||||||||    
T  22592318 ctcacttttgaacattctctctggcactcactcttttattggatgaaataaatgtttgtcccaccactttgt 22592389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 27654478 - 27654560
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| |||||||  |||||||||||||||||| || ||| ||| ||||| ||| |||  ||| ||||||||||||||||    
T  27654478 aatgctagggacactctcttttcaacactctctctaacactcattctcttattggataaaactaatgtatgtcccaccacttt 27654560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 2187967 - 2187910
Alignment:
Q  413 cactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||||||| ||| |||||||||| | ||||||||||  |||||||||||||||    
T  2187967 cactctctctagctttcgctcttttattgggtgaaatcaatgaatgtcccaccacttt 2187910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 42862575 - 42862518
Alignment:
Q  413 cactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| ||||||||| ||||| ||||||| | |||||||||| ||||||||||||||||    
T  42862575 cactttctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccacttt 42862518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 13519947 - 13520034
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagat--gaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||||| |||||||||| || ||||||| ||||| ||||| ||| ||| |||   |||||||| ||||| ||||||||||||    
T  13519947 gaatgctagcgatactcatttttaaatactctctgtagcactcactatttaattggataaaaaatcaatgtatgttccaccactttgt 13520034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 472
Target Start/End: Original strand, 24834579 - 24834663
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||| ||||||| ||||  |||||||||||| |  ||||  ||||||| |||| ||||||| |||||||||||| |||||    
T  24834579 aatgctagcaacactcactttttgacactctctctaacgctcacatttttattggatggaatcaatgtatgtcccaccattttgt 24834663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 468
Target Start/End: Complemental strand, 18421967 - 18421928
Alignment:
Q  429 cactcttttattagatgaaatcaatatatgtcccaccact 468  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  18421967 cacttttttattagatgaaatcaatgtatgtcccaccact 18421928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 470
Target Start/End: Complemental strand, 25719286 - 25719210
Alignment:
Q  392 ctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||| |||||| |||||  |||||||||| | || ||||||| ||||| | |||||||||| ||||||||||||||||    
T  25719286 ctagcaacactctttttt--acactctctcaaacactcactctcttattggttgaaatcaatgtatgtcccaccacttt 25719210  T

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Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 472
Target Start/End: Complemental strand, 45311078 - 45311043
Alignment:
Q  437 tattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||| |||||||||||||||||||||||||||||||    
T  45311078 tattggatgaaatcaatatatgtcccaccactttgt 45311043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 49682971 - 49682888
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||| |||| |||||  || ||||||||| ||| ||||||||||| ||||||  |||||||||||| ||| || |||||||||    
T  49682971 gaatgttagcaacacttgttattcaacactttctttagcattcacttttttatcggatgaaatcaatgtatatctcaccacttt 49682888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Original strand, 51206079 - 51206126
Alignment:
Q  423 agcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| |||||| ||||||||||||||||||| ||||||||| ||||||    
T  51206079 agcactcactcatttattagatgaaatcaatgtatgtcccatcacttt 51206126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 453
Target Start/End: Complemental strand, 37315743 - 37315677
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||||||||| |||||| ||||| | |||||||  ||||| ||||||||||||| | ||||||||||    
T  37315743 gaatgctagcaacactcttttttgagcactctcattagcactcactcttttattgggtgaaatcaat 37315677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 39016664 - 39016742
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    ||||||||| ||| ||  |||| |||||||||| || || | ||| ||||||| |||||||||||| ||||||||||||    
T  39016664 aatgctagcaacattctcttttaaacactctctataacacttactattttattggatgaaatcaatgtatgtcccacca 39016742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 472
Target Start/End: Complemental strand, 50481706 - 50481640
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||||| | |  || ||||||||||||| |||||||||||  |||||| |||||||||||    
T  50481706 ttttcaacactctttttctcactcactcttttattggatgaaatcaaagtatgtctcaccactttgt 50481640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 453
Target Start/End: Complemental strand, 51206226 - 51206160
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||| ||||| ||||||  |||| | |||||||||||||| ||||||||||||| | ||||||||||    
T  51206226 gaatactagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaat 51206160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 2088839 - 2088762
Alignment:
Q  393 tagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| |||||| ||||| |  |||||||||| || ||||||||| |||   |||||||||| ||||||||||||||||    
T  2088839 tagcaacactcttttttgagtactctctctaacactcactctttaattgagtgaaatcaatgtatgtcccaccacttt 2088762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 13069971 - 13070023
Alignment:
Q  417 ctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||||||||||||| | |||||||||| ||||| ||||||||||    
T  13069971 ctctctagcactcactcttttatt-ggtgaaatcaatgtatgttccaccacttt 13070023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 16178610 - 16178666
Alignment:
Q  413 cactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||||| |||||||||  | || |||||||||| ||||||||||||||||    
T  16178610 cactctctctagcactcactctttattgag-tgaaatcaatgtatgtcccaccacttt 16178666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 473
Target Start/End: Complemental strand, 24938554 - 24938509
Alignment:
Q  428 tcactcttttattagatgaaatcaatatatgtcccaccactttgtt 473  Q
    ||||||||||||| |||| ||||||| |||||||||||| ||||||    
T  24938554 tcactcttttattggatgtaatcaatgtatgtcccaccattttgtt 24938509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 470
Target Start/End: Complemental strand, 30867086 - 30867029
Alignment:
Q  413 cactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| ||||||||| ||||| ||||||| ||| |||| ||| ||||||||||||||||    
T  30867086 cactatctctagcactcacttttttattggattaaattaatgtatgtcccaccacttt 30867029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 453
Target Start/End: Complemental strand, 39016845 - 39016780
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||| |||| ||||||  |||| |||||||||||||||| | ||||||||||||| | ||||||||    
T  39016845 aatgttagcaacactctcttttgaacactctctctagcacttactcttttattaggtaaaatcaat 39016780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 470
Target Start/End: Original strand, 48608118 - 48608163
Alignment:
Q  425 cattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||||||| ||| |||| ||| ||||||||||||||||    
T  48608118 cattcactcttttattggataaaattaatgtatgtcccaccacttt 48608163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 473
Target Start/End: Complemental strand, 1559891 - 1559811
Alignment:
Q  393 tagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgtt 473  Q
    |||| ||||||| ||||  ||||||||| ||||| |||||| ||||||  ||| ||||||  |||||||||||| ||||||    
T  1559891 tagcaacactcacttttgtacactctctttagcactcactcctttattgaatggaatcaacgtatgtcccaccaatttgtt 1559811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 37315564 - 37315643
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||| ||||||  |||| | ||||||||||| || ||||||||||    | |||||||||| ||||||||||||||||    
T  37315564 aatgctagcaacactctcttttgagcactctctctaacactcactcttttg---ggtgaaatcaatgtatgtcccaccacttt 37315643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 450
Target Start/End: Original strand, 40615247 - 40615291
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatc 450  Q
    |||||||||||||||||| |||||||| | ||||| |||||||||    
T  40615247 ttttcaacactctctctaacattcactatcttattggatgaaatc 40615291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 459
Target Start/End: Original strand, 42862418 - 42862490
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgt 459  Q
    |||||||||| ||||||  |||| | |||| | ||||||| ||||||||||||| | |||||||||| |||||    
T  42862418 gaatgctagcaacactctcttttgagcactatatctagcactcactcttttattgggtgaaatcaatttatgt 42862490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 460
Target Start/End: Original strand, 46287438 - 46287514
Alignment:
Q  384 gaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtc 460  Q
    ||||||||||||  ||||||| ||||||| | | | ||||||| | ||| ||||||| |||||||| ||||||||||    
T  46287438 gaagaatgctagtaacactcacttttcaatattttttctagcacttactattttattggatgaaattaatatatgtc 46287514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 470
Target Start/End: Complemental strand, 51904777 - 51904713
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||||||||| |  || ||| ||| |||||||||||||||||| |||| |||| ||||||    
T  51904777 ttttcaacactctctttgtcactcattctcttattagatgaaatcaatgtatgacccatcacttt 51904713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 8e-22; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 28490902 - 28490817
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||||||| ||||||| |||||||||||  ||||||||||||||||||    
T  28490902 gaatgctagcaacagtcacttttcaaaactctctctagcattcacttttttattggatgaaatcaaagtatgtcccaccactttgt 28490817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 382 - 470
Target Start/End: Complemental strand, 42224776 - 42224688
Alignment:
Q  382 ttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||| |||||||||| ||||||  |||| | |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||    
T  42224776 ttgaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccaccacttt 42224688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 10142154 - 10142071
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||||||||||||||||||| |  |||| ||||||||||||| ||| |||||||| ||||||||||||||||||    
T  10142154 gaatgctagcaacactcatttttcaacactctat--agcactcactcttttattggataaaatcaatgtatgtcccaccactttgt 10142071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 17537269 - 17537203
Alignment:
Q  400 actcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccacca 466  Q
    ||||| |||||||||||||||||| || ||||||||||||| ||| |||||||| ||||||||||||    
T  17537269 actcacttttcaacactctctctatcactcactcttttatttgatcaaatcaatgtatgtcccacca 17537203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 404 - 472
Target Start/End: Complemental strand, 41330556 - 41330488
Alignment:
Q  404 atttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||| |||||||| | |||||| ||||||||||||||||||||| ||| ||||||||| ||||||||    
T  41330556 atttttgaacactctttgtagcatccactcttttattagatgaaattaatgtatgtcccatcactttgt 41330488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 5465831 - 5465764
Alignment:
Q  402 tcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactt 469  Q
    |||||||| |||||||||| ||||||| | |||||||||||||||||| ||||||||| ||| |||||    
T  5465831 tcatttttgaacactctctttagcatttattcttttattagatgaaattaatatatgttccaacactt 5465764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 30326054 - 30325971
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| ||| ||| ||||  ||||||||| ||||| ||||| ||||||| |||||||||||| |||||| |||||||||    
T  30326054 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccacttt 30325971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 40971633 - 40971550
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||| | ||||||  |||| | |||||||||||||| |||||||||||||   |||||||||| ||||||||||||||||    
T  40971633 gaatgctaacaacactctcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgtatgtcccaccacttt 40971550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 387 - 469
Target Start/End: Original strand, 32309480 - 32309562
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactt 469  Q
    ||||||||| |||||||  ||||||||| ||||||||||| ||||||| ||||| ||| |||| ||| ||||||| |||||||    
T  32309480 gaatgctagagacactctcttttcaacattctctctagcactcactctcttattggataaaattaatgtatgtccgaccactt 32309562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 37455360 - 37455434
Alignment:
Q  398 acactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||||| ||||||||||||||||  ||||| |||||| ||| |||||||| ||||| |||||| |||||    
T  37455360 acactcattttttaacactctctctagcacacactcatttattcgataaaatcaatgtatgttccaccattttgt 37455434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 34368360 - 34368445
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||||| |||||| |||||| |||||| || ||||||||| ||| ||| ||| |||| ||||| ||||||||||||    
T  34368360 gaatgctagcaacacttatttttgaacactttctctaacactcactctttcattggataaaaccaatgtatgttccaccactttgt 34368445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 472
Target Start/End: Complemental strand, 5413876 - 5413832
Alignment:
Q  428 tcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  5413876 tcactcttttattggatgaaatcaatgtatgtcccaccactttgt 5413832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 470
Target Start/End: Original strand, 32050330 - 32050390
Alignment:
Q  410 caacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||||||||||||||| ||||||||| | |||||| |||||||||| || ||||||    
T  32050330 caacactctctctagcattcattcttttattgggtgaaattaatatatgtctcatcacttt 32050390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 431 - 470
Target Start/End: Original strand, 24915099 - 24915138
Alignment:
Q  431 ctcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  24915099 ctcttttattaggtgaaatcaatatatgtcccaccacttt 24915138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 473
Target Start/End: Complemental strand, 28434973 - 28434910
Alignment:
Q  410 caacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgtt 473  Q
    |||||||||||||| || | | ||||||||| ||| ||||||||||||||||||||||| ||||    
T  28434973 caacactctctctaacactaattcttttattggataaaatcaatatatgtcccaccactgtgtt 28434910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 458
Target Start/End: Complemental strand, 8912668 - 8912622
Alignment:
Q  412 acactctctctagcattcactcttttattagatgaaatcaatatatg 458  Q
    |||||||||||| || ||||||||||||||| |||||||||||||||    
T  8912668 acactctctctatcactcactcttttattaggtgaaatcaatatatg 8912622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 27592607 - 27592549
Alignment:
Q  412 acactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||| ||||| ||||| ||||||| |||||||||||| |||||| |||||||||    
T  27592607 acactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccacttt 27592549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 6263909 - 6263966
Alignment:
Q  413 cactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||||| || |||||| |||||| | | |||||||||||||||||||||||||    
T  6263909 cactctctctatcactcactcctttattgggtaaaatcaatatatgtcccaccacttt 6263966  T

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Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 472
Target Start/End: Complemental strand, 28090410 - 28090324
Alignment:
Q  384 gaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||| |||| ||||| |||||||||||||  ||||| || | ||| || ||||| |||||||||||  |||||||||||||||||    
T  28090410 gaagaatgttagcaacacttatttttcaacact--ctctatcacttactattatattatatgaaatcaattcatgtcccaccactttgt 28090324  T

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Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 17568855 - 17568799
Alignment:
Q  414 actctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||| |||||| |||||||||||||   |||||||||| ||||||||||||||||    
T  17568855 actctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccacttt 17568799  T

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Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 470
Target Start/End: Original strand, 24990930 - 24990969
Alignment:
Q  431 ctcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  24990930 ctcttttattgggtgaaatcaatatatgtcccaccacttt 24990969  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 8912511 - 8912593
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||| || |||  |||| |||||| | ||||||| ||||||||||||| | | |||| |||||||||||| |||||||    
T  8912511 aatgctagcaacgctctcttttaaacactttttctagcactcactcttttatttggtaaaattaatatatgtccctccacttt 8912593  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 449
Target Start/End: Original strand, 17568687 - 17568761
Alignment:
Q  375 atattttttgaagaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaat 449  Q
    |||||||| || |||||||||| ||||||  |||| | ||||||| ||||||  |||||||||||| ||||||||    
T  17568687 atatttttcgaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaat 17568761  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 10253232 - 10253179
Alignment:
Q  417 ctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||| || |||||||| |||| |||||||| ||| ||||||||||||||||    
T  10253232 ctctctaacactcactcttctattggatgaaattaatgtatgtcccaccacttt 10253179  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 28611958 - 28611873
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||| | ||||||| |||| | ||||||||||| |||||||||||| ||| |||  || || | ||||||||| ||||||||    
T  28611958 gaatgctaacaacactcacttttgagcactctctctaacattcactctttcattggatataaccagtgtatgtcccatcactttgt 28611873  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 464
Target Start/End: Complemental strand, 32050490 - 32050413
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccac 464  Q
    |||||||||| ||||||  |||| | || ||||||||||| ||||| ||||||| | |||||||||| ||||| ||||    
T  32050490 gaatgctagcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgtatgttccac 32050413  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 39246608 - 39246693
Alignment:
Q  387 gaatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||| ||| ||| |||| | ||  ||||||| || ||||| | ||||| ||| |||||||| ||||||||||||||||||    
T  39246608 gaatgctagcaacaatcacttttgagcatcctctctaacaatcactttcttattggataaaatcaatgtatgtcccaccactttgt 39246693  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 453
Target Start/End: Original strand, 13456192 - 13456228
Alignment:
Q  417 ctctctagcattcactcttttattagatgaaatcaat 453  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  13456192 ctctctagcactcactcttttattaggtgaaatcaat 13456228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 472
Target Start/End: Original strand, 43405434 - 43405478
Alignment:
Q  428 tcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||||||  ||||||||||| |||||| |||||||||||    
T  43405434 tcactcttttattgaatgaaatcaatgtatgtctcaccactttgt 43405478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 406 - 472
Target Start/End: Original strand, 2241 - 2307
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| | ||||||||||| |||||||||||| ||||||||||||| |||||| ||| |||||||    
T  2241 ttttcaatattctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgt 2307  T

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Target: scaffold0832 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 406 - 472
Target Start/End: Original strand, 2272 - 2338
Alignment:
Q  406 ttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||||| | ||||||||||| |||||||||||| ||||||||||||| |||||| ||| |||||||    
T  2272 ttttcaatattctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgt 2338  T

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Target: scaffold0543 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 472
Target Start/End: Original strand, 9687 - 9749
Alignment:
Q  410 caacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||||||| || ||||| ||||||| |||||||||||| ||| |||||||| |||||    
T  9687 caacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgt 9749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 472
Target Start/End: Original strand, 11233 - 11295
Alignment:
Q  410 caacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    |||||||||||||| || ||||| ||||||| |||||||||||| ||| |||||||| |||||    
T  11233 caacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgt 11295  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 467
Target Start/End: Original strand, 296837 - 296916
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttattagatgaaatcaatatatgtcccaccac 467  Q
    |||||||| ||||||   |||||||||||||||||| || ||||||| ||||| |||||||  | | |||||||||||||    
T  296837 aatgctagggacactttcttttcaacactctctctaacactcactctcttattggatgaaactagtgtatgtcccaccac 296916  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 8566 - 8512
Alignment:
Q  416 tctctctagcattcactcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||| || |||| ||||||||||  ||||||||||||||||||| |||||||||    
T  8566 tctctttaacatttactcttttatgggatgaaatcaatatatgtctcaccacttt 8512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 432 - 470
Target Start/End: Original strand, 27358 - 27396
Alignment:
Q  432 tcttttattagatgaaatcaatatatgtcccaccacttt 470  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  27358 tcttttattgggtgaaatcaatatatgtcccaccacttt 27396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 422 - 472
Target Start/End: Original strand, 27847 - 27897
Alignment:
Q  422 tagcattcactcttttattagatgaaatcaatatatgtcccaccactttgt 472  Q
    ||||| |||| |||||||| |||| ||||||| ||||||||||||||||||    
T  27847 tagcactcacgcttttattggatggaatcaatgtatgtcccaccactttgt 27897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 204707 - 204759
Alignment:
Q  388 aatgctagcgacactcatttttcaacactctctctagcattcactcttttatt 440  Q
    ||||||||| |||||| ||||| |||| ||||||||| | |||||||||||||    
T  204707 aatgctagcaacactcttttttgaacattctctctagtactcactcttttatt 204759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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