View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3048R-Insertion-16 (Length: 727)

Name: NF3048R-Insertion-16
Description: NF3048R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3048R-Insertion-16
NF3048R-Insertion-16
[»] chr8 (32 HSPs)
chr8 (12-416)||(36612236-36612640)
chr8 (554-727)||(12571861-12572032)
chr8 (553-727)||(41681131-41681301)
chr8 (554-726)||(19176668-19176837)
chr8 (554-727)||(44831622-44831792)
chr8 (559-727)||(33328161-33328326)
chr8 (554-727)||(11656453-11656624)
chr8 (553-726)||(31133217-31133387)
chr8 (555-727)||(9930034-9930203)
chr8 (555-672)||(13225069-13225185)
chr8 (554-670)||(19176288-19176403)
chr8 (560-727)||(13224645-13224808)
chr8 (556-672)||(41681564-41681679)
chr8 (554-672)||(34540978-34541095)
chr8 (556-726)||(9178014-9178180)
chr8 (559-672)||(9928912-9929024)
chr8 (555-672)||(11656887-11657003)
chr8 (555-672)||(44831246-44831362)
chr8 (557-669)||(31133653-31133764)
chr8 (554-672)||(33742920-33743036)
chr8 (559-672)||(12572281-12572393)
chr8 (554-669)||(4629795-4629909)
chr8 (554-665)||(11336959-11337069)
chr8 (558-670)||(33328572-33328683)
chr8 (559-727)||(4630169-4630328)
chr8 (603-725)||(33743298-33743417)
chr8 (446-543)||(36612658-36612751)
chr8 (555-669)||(8073985-8074097)
chr8 (554-666)||(10918124-10918235)
chr8 (553-589)||(9177664-9177700)
chr8 (555-596)||(10919691-10919732)
chr8 (554-631)||(35427283-35427360)
[»] chr5 (44 HSPs)
chr5 (554-727)||(18183346-18183516)
chr5 (552-727)||(2865132-2865304)
chr5 (556-727)||(5819306-5819474)
chr5 (556-727)||(8647438-8647606)
chr5 (556-727)||(19359136-19359304)
chr5 (553-727)||(8460927-8461098)
chr5 (554-727)||(15708969-15709138)
chr5 (554-721)||(24362219-24362383)
chr5 (554-726)||(15372251-15372420)
chr5 (555-726)||(29455120-29455288)
chr5 (554-727)||(14215620-14215790)
chr5 (553-672)||(19359566-19359684)
chr5 (551-669)||(5818924-5819041)
chr5 (554-669)||(8647871-8647985)
chr5 (554-727)||(164568-164738)
chr5 (552-672)||(18182966-18183085)
chr5 (554-672)||(24331557-24331676)
chr5 (556-672)||(164191-164305)
chr5 (555-669)||(8461364-8461477)
chr5 (554-724)||(14463901-14464067)
chr5 (558-672)||(2864756-2864869)
chr5 (553-724)||(24331940-24332112)
chr5 (558-670)||(15371873-15371983)
chr5 (555-670)||(25000521-25000635)
chr5 (558-672)||(14215243-14215356)
chr5 (555-672)||(29454739-29454855)
chr5 (557-672)||(4222152-4222266)
chr5 (555-727)||(16018588-16018755)
chr5 (562-719)||(24361843-24361997)
chr5 (551-721)||(16018969-16019137)
chr5 (556-672)||(7349447-7349562)
chr5 (562-719)||(24325218-24325372)
chr5 (556-672)||(15709399-15709513)
chr5 (578-726)||(25000112-25000257)
chr5 (556-653)||(4623148-4623245)
chr5 (556-672)||(4219663-4219778)
chr5 (556-672)||(7348559-7348674)
chr5 (557-672)||(6018315-6018428)
chr5 (562-665)||(6019208-6019309)
chr5 (575-672)||(4624655-4624751)
chr5 (554-609)||(15115585-15115640)
chr5 (607-672)||(13814157-13814226)
chr5 (635-672)||(14462683-14462719)
chr5 (555-612)||(41834549-41834606)
[»] scaffold0295 (2 HSPs)
scaffold0295 (554-727)||(4791-4961)
scaffold0295 (558-671)||(5222-5334)
[»] chr4 (56 HSPs)
chr4 (554-727)||(25447613-25447783)
chr4 (554-727)||(12234327-12234497)
chr4 (556-727)||(11153524-11153692)
chr4 (554-727)||(25937668-25937838)
chr4 (554-727)||(22434555-22434723)
chr4 (558-727)||(33109686-33109852)
chr4 (558-727)||(46193782-46193948)
chr4 (554-672)||(23494873-23494990)
chr4 (553-727)||(38962196-38962367)
chr4 (559-727)||(2118673-2118837)
chr4 (553-672)||(15523232-15523350)
chr4 (555-727)||(15523611-15523780)
chr4 (558-726)||(23494445-23494610)
chr4 (556-672)||(25447247-25447362)
chr4 (554-727)||(51020795-51020965)
chr4 (555-727)||(22170314-22170482)
chr4 (555-727)||(48526195-48526363)
chr4 (554-672)||(20470941-20471058)
chr4 (558-724)||(4219559-4219722)
chr4 (552-672)||(51021226-51021344)
chr4 (556-672)||(22434179-22434294)
chr4 (556-672)||(45082854-45082969)
chr4 (556-672)||(46193405-46193520)
chr4 (554-672)||(4219989-4220106)
chr4 (556-672)||(12234759-12234874)
chr4 (552-672)||(33109894-33110013)
chr4 (552-672)||(54995065-54995184)
chr4 (554-726)||(54995446-54995614)
chr4 (558-671)||(18763951-18764063)
chr4 (555-672)||(25938101-25938217)
chr4 (556-668)||(35363034-35363146)
chr4 (559-672)||(48526611-48526723)
chr4 (554-727)||(45082430-45082598)
chr4 (559-670)||(18751602-18751712)
chr4 (558-672)||(2118295-2118408)
chr4 (555-672)||(11153145-11153261)
chr4 (557-672)||(44892578-44892692)
chr4 (557-665)||(20958296-20958403)
chr4 (552-671)||(48713777-48713895)
chr4 (552-663)||(48708291-48708401)
chr4 (575-672)||(43243710-43243806)
chr4 (555-626)||(16318251-16318322)
chr4 (555-653)||(10258335-10258433)
chr4 (553-671)||(48293591-48293708)
chr4 (575-672)||(12503455-12503551)
chr4 (575-672)||(43281221-43281316)
chr4 (556-666)||(48294979-48295088)
chr4 (559-672)||(16690939-16691051)
chr4 (557-666)||(44890518-44890626)
chr4 (624-727)||(12503813-12503913)
chr4 (614-672)||(43242328-43242385)
chr4 (556-669)||(16691505-16691616)
chr4 (563-669)||(20957196-20957301)
chr4 (556-653)||(55189528-55189625)
chr4 (681-727)||(18751979-18752025)
chr4 (555-609)||(55677451-55677505)
[»] chr7 (31 HSPs)
chr7 (551-727)||(19830415-19830588)
chr7 (552-727)||(35289278-35289450)
chr7 (555-727)||(37786766-37786935)
chr7 (556-727)||(19590525-19590693)
chr7 (555-727)||(38858642-38858811)
chr7 (559-727)||(29100228-29100393)
chr7 (552-727)||(4478077-4478249)
chr7 (554-727)||(2659217-2659387)
chr7 (556-727)||(32004991-32005159)
chr7 (554-726)||(34534169-34534338)
chr7 (554-672)||(19590955-19591072)
chr7 (559-723)||(4641443-4641604)
chr7 (552-727)||(23953106-23953277)
chr7 (554-672)||(38859071-38859188)
chr7 (556-672)||(35288903-35289018)
chr7 (554-669)||(2658837-2658951)
chr7 (553-672)||(32004611-32004729)
chr7 (553-672)||(34533788-34533906)
chr7 (554-672)||(37787197-37787314)
chr7 (569-672)||(29099863-29099965)
chr7 (554-672)||(23952728-23952846)
chr7 (555-665)||(19830856-19830965)
chr7 (559-672)||(4641874-4641983)
chr7 (554-672)||(38160949-38161066)
chr7 (551-672)||(28583434-28583554)
chr7 (557-669)||(28584355-28584466)
chr7 (555-620)||(39137014-39137080)
chr7 (551-607)||(5333875-5333931)
chr7 (693-727)||(32427398-32427432)
chr7 (693-727)||(35579264-35579298)
chr7 (556-609)||(26048439-26048492)
[»] chr2 (38 HSPs)
chr2 (551-727)||(11090516-11090689)
chr2 (551-724)||(22374315-22374485)
chr2 (555-727)||(40027139-40027308)
chr2 (554-724)||(239351-239517)
chr2 (554-727)||(1978106-1978276)
chr2 (555-724)||(26538096-26538262)
chr2 (554-727)||(40815722-40815892)
chr2 (556-727)||(43058333-43058501)
chr2 (554-727)||(18451208-18451378)
chr2 (556-727)||(28616613-28616782)
chr2 (555-715)||(7446341-7446497)
chr2 (554-672)||(26538509-26538626)
chr2 (562-727)||(3025472-3025633)
chr2 (559-727)||(14432145-14432310)
chr2 (554-672)||(43058763-43058879)
chr2 (554-672)||(7446776-7446893)
chr2 (554-672)||(20440461-20440578)
chr2 (554-672)||(22374755-22374872)
chr2 (555-672)||(18450829-18450945)
chr2 (559-672)||(40027570-40027682)
chr2 (552-672)||(11090950-11091069)
chr2 (559-727)||(8425737-8425902)
chr2 (555-672)||(20444748-20444864)
chr2 (553-672)||(1978539-1978657)
chr2 (553-672)||(28847125-28847243)
chr2 (557-672)||(35781093-35781207)
chr2 (555-669)||(28617047-28617160)
chr2 (558-672)||(40815347-40815460)
chr2 (557-669)||(239785-239896)
chr2 (556-672)||(35779708-35779823)
chr2 (558-668)||(8972239-8972348)
chr2 (559-672)||(8425358-8425469)
chr2 (556-672)||(3025893-3026006)
chr2 (558-672)||(14432571-14432684)
chr2 (558-672)||(15552484-15552596)
chr2 (558-670)||(15551501-15551612)
chr2 (689-727)||(28143408-28143446)
chr2 (555-609)||(42192736-42192790)
[»] chr1 (41 HSPs)
chr1 (555-727)||(50970655-50970824)
chr1 (556-727)||(29306953-29307121)
chr1 (555-727)||(5540195-5540364)
chr1 (555-727)||(15646572-15646741)
chr1 (556-727)||(8678919-8679086)
chr1 (553-724)||(18984116-18984284)
chr1 (555-727)||(29869619-29869788)
chr1 (558-727)||(33144296-33144462)
chr1 (553-726)||(26859438-26859607)
chr1 (554-727)||(9018971-9019141)
chr1 (559-727)||(5962955-5963120)
chr1 (559-727)||(15173099-15173264)
chr1 (556-727)||(21856420-21856588)
chr1 (551-672)||(8678536-8678656)
chr1 (552-672)||(50970274-50970393)
chr1 (556-727)||(29307318-29307487)
chr1 (551-672)||(5539811-5539931)
chr1 (551-672)||(17433645-17433765)
chr1 (555-672)||(18984549-18984665)
chr1 (556-672)||(29870049-29870164)
chr1 (556-724)||(17433216-17433381)
chr1 (554-672)||(9019393-9019510)
chr1 (557-670)||(4636403-4636515)
chr1 (555-672)||(39154450-39154566)
chr1 (552-672)||(15173524-15173642)
chr1 (556-672)||(26859059-26859174)
chr1 (564-672)||(33143925-33144032)
chr1 (554-672)||(15646190-15646307)
chr1 (558-672)||(21856044-21856157)
chr1 (553-722)||(39154016-39154182)
chr1 (555-672)||(52268289-52268405)
chr1 (557-668)||(5962579-5962689)
chr1 (558-672)||(52269178-52269291)
chr1 (554-642)||(2733416-2733504)
chr1 (564-653)||(47827036-47827125)
chr1 (558-631)||(47826966-47827039)
chr1 (616-727)||(4636033-4636140)
chr1 (556-672)||(17112282-17112396)
chr1 (551-617)||(52235153-52235219)
chr1 (556-636)||(50419726-50419806)
chr1 (556-609)||(10279040-10279093)
[»] chr6 (34 HSPs)
chr6 (553-727)||(18257134-18257305)
chr6 (554-727)||(20741098-20741268)
chr6 (555-727)||(15828018-15828187)
chr6 (556-727)||(10900307-10900475)
chr6 (554-727)||(28472635-28472804)
chr6 (554-727)||(29859824-29859993)
chr6 (556-727)||(11276959-11277127)
chr6 (554-672)||(12935155-12935272)
chr6 (553-727)||(12935534-12935705)
chr6 (557-727)||(31470693-31470860)
chr6 (554-719)||(2319670-2319832)
chr6 (554-727)||(11444985-11445155)
chr6 (554-672)||(11445417-11445534)
chr6 (554-668)||(22219787-22219900)
chr6 (559-727)||(10899942-10900108)
chr6 (556-727)||(1149808-1149977)
chr6 (553-668)||(23075562-23075676)
chr6 (555-672)||(31470314-31470430)
chr6 (555-726)||(23073998-23074155)
chr6 (555-672)||(20741531-20741650)
chr6 (559-672)||(18504922-18505034)
chr6 (556-672)||(18257567-18257682)
chr6 (557-718)||(18505305-18505463)
chr6 (553-644)||(1149462-1149553)
chr6 (559-723)||(2322600-2322760)
chr6 (556-722)||(4811372-4811535)
chr6 (556-666)||(4811692-4811801)
chr6 (557-672)||(15827639-15827755)
chr6 (558-653)||(29033436-29033531)
chr6 (555-727)||(11276589-11276759)
chr6 (558-670)||(29035069-29035180)
chr6 (559-672)||(3835156-3835268)
chr6 (554-672)||(18296143-18296260)
chr6 (556-612)||(22534214-22534270)
[»] chr3 (58 HSPs)
chr3 (551-727)||(31779029-31779202)
chr3 (556-727)||(39555954-39556122)
chr3 (551-727)||(5136975-5137148)
chr3 (556-724)||(32535339-32535508)
chr3 (554-727)||(20840558-20840728)
chr3 (555-727)||(23644461-23644630)
chr3 (551-727)||(25853604-25853777)
chr3 (559-727)||(41046703-41046868)
chr3 (554-727)||(24300933-24301103)
chr3 (555-727)||(27393954-27394123)
chr3 (555-727)||(37726928-37727097)
chr3 (556-727)||(43973441-43973609)
chr3 (554-672)||(43973870-43973987)
chr3 (554-670)||(29801848-29801963)
chr3 (554-714)||(48452987-48453144)
chr3 (554-727)||(30104480-30104649)
chr3 (555-672)||(20840991-20841107)
chr3 (554-727)||(26837733-26837902)
chr3 (556-672)||(37727360-37727475)
chr3 (553-672)||(4275794-4275912)
chr3 (554-672)||(17464489-17464606)
chr3 (555-672)||(27393660-27393776)
chr3 (555-668)||(39555577-39555689)
chr3 (556-672)||(23644895-23645010)
chr3 (560-727)||(22425190-22425354)
chr3 (555-672)||(30098193-30098309)
chr3 (555-672)||(31778652-31778768)
chr3 (559-672)||(32534962-32535074)
chr3 (556-668)||(25853234-25853345)
chr3 (554-672)||(5137411-5137528)
chr3 (559-669)||(26274570-26274679)
chr3 (556-669)||(29801356-29801468)
chr3 (554-672)||(22424812-22424929)
chr3 (555-724)||(17464871-17465038)
chr3 (559-672)||(25612407-25612519)
chr3 (554-727)||(26274944-26275113)
chr3 (556-672)||(50116839-50116954)
chr3 (552-672)||(26837356-26837475)
chr3 (556-672)||(23228438-23228552)
chr3 (557-671)||(51473429-51473542)
chr3 (554-672)||(51474764-51474881)
chr3 (559-672)||(41047129-41047239)
chr3 (559-670)||(24300560-24300669)
chr3 (557-672)||(32697130-32697244)
chr3 (553-632)||(37222040-37222119)
chr3 (572-671)||(18010176-18010274)
chr3 (553-668)||(45965935-45966049)
chr3 (557-671)||(25419145-25419260)
chr3 (558-669)||(25420574-25420684)
chr3 (553-672)||(37220554-37220672)
chr3 (555-587)||(25611497-25611529)
chr3 (552-607)||(40838648-40838703)
chr3 (554-609)||(49720369-49720424)
chr3 (554-609)||(52375824-52375879)
chr3 (554-632)||(49407794-49407872)
chr3 (689-727)||(49407925-49407963)
chr3 (689-727)||(55192247-55192285)
chr3 (681-726)||(29801538-29801583)
[»] scaffold0951 (2 HSPs)
scaffold0951 (553-727)||(1664-1835)
scaffold0951 (554-672)||(2097-2214)
[»] scaffold1223 (2 HSPs)
scaffold1223 (553-727)||(750-920)
scaffold1223 (556-672)||(1171-1286)
[»] scaffold0273 (2 HSPs)
scaffold0273 (554-727)||(4584-4754)
scaffold0273 (595-668)||(4242-4314)
[»] scaffold0019 (1 HSPs)
scaffold0019 (554-727)||(134050-134220)
[»] scaffold0007 (3 HSPs)
scaffold0007 (555-727)||(64301-64470)
scaffold0007 (559-672)||(64735-64847)
scaffold0007 (689-727)||(205746-205784)
[»] scaffold0176 (2 HSPs)
scaffold0176 (555-726)||(18834-19001)
scaffold0176 (556-655)||(19067-19166)
[»] scaffold0027 (2 HSPs)
scaffold0027 (554-727)||(42536-42705)
scaffold0027 (559-665)||(42172-42277)
[»] scaffold0417 (2 HSPs)
scaffold0417 (556-672)||(11053-11168)
scaffold0417 (575-727)||(10640-10789)
[»] scaffold0432 (2 HSPs)
scaffold0432 (559-727)||(10250-10414)
scaffold0432 (559-653)||(9935-10029)
[»] scaffold0113 (1 HSPs)
scaffold0113 (555-671)||(28674-28789)
[»] scaffold1585 (1 HSPs)
scaffold1585 (557-669)||(568-679)
[»] scaffold0057 (2 HSPs)
scaffold0057 (559-672)||(61888-62000)
scaffold0057 (553-630)||(61025-61102)
[»] scaffold0076 (1 HSPs)
scaffold0076 (559-653)||(8457-8551)
[»] scaffold0157 (2 HSPs)
scaffold0157 (575-672)||(16926-17022)
scaffold0157 (624-727)||(16564-16664)
[»] scaffold1696 (1 HSPs)
scaffold1696 (560-672)||(454-564)
[»] scaffold0168 (1 HSPs)
scaffold0168 (605-672)||(7718-7784)


Alignment Details
Target: chr8 (Bit Score: 346; Significance: 0; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 12 - 416
Target Start/End: Original strand, 36612236 - 36612640
Alignment:
Q  12 actaactttgatgccaaggtgtttgtttgctagcagtttcgttctccaccaaagcaaatggtactgtggactctgatgagcctttctcatatgatcttaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36612236 actaactttgatgccaaggtgtttgtttgctagcagtttcgttctccaccaaagcaaatggtactgtg-actctgatgagcctttctcatatgatcttaa 36612334  T
Q  112 tccaaattgtctccaccaacaaaaacattgatgagacaaatctttaacaattatcattgacaccttgaaaaattacaaaacggatcatctgttttccatc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  36612335 tccaaattgtctccaccaacaaaaacattgatgagacaaatctttaacaattatcattgaccccttgaaaaattacaaaacggatcatctcttttgcatc 36612434  T
Q  212 gctctctccttctcc-tacttccaaaatatgtgtataggatcttctctcttgattttcaatctaaaatttagataaagataggttcgaatattggaccga 310  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  36612435 gctctctccttctccctacttccaaaatatgtgtataggatcttctctcttgattttcaatctaaaatttagacaaagatagactcgaatattggaccga 36612534  T
Q  311 ggtagaatgaaagggtcagatataaataactattttgaaatttttattgttttcaatattaaaacaattgtaaattaagtgattgagttcaagtgataaa 410  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  36612535 ggtagaatgagaggatcaaatataaataactattttgaaatttttattgtttttaatattaaaacaattgtaaattaagtgattgagctcaagtgataaa 36612634  T
Q  411 tgagtt 416  Q
    ||||||    
T  36612635 tgagtt 36612640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 12571861 - 12572032
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||    
T  12571861 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatca-tttt 12571959  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  12571960 tgttgcatttttcgtccta-accccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 12572032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 553 - 727
Target Start/End: Original strand, 41681131 - 41681301
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  41681131 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttt 41681229  T
Q  653 ttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||| || |||||    
T  41681230 ttgttgcatttttcgtccta---cccccattttattctccaaaaacgcagagaaatgacagttttaaacataccc 41681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 554 - 726
Target Start/End: Complemental strand, 19176837 - 19176668
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  19176837 taggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 19176739  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
    |||||||||||||||||||        ||||||||||||||||||||||| |||| |||||||||||||||||    
T  19176738 tgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagacaaatgacagttttagacctacc 19176668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 44831792 - 44831622
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||    
T  44831792 taggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcat-ttt 44831694  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||| ||||||        |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  44831693 tgttgcatttttggtccta--ccccccattttattctccaaaaacacagagaaatgacagttttagacctaccc 44831622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 559 - 727
Target Start/End: Original strand, 33328161 - 33328326
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||| |||||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatca-tttttgttg 33328259  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||        ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  33328260 catttttcgtccta--ccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccc 33328326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 11656453 - 11656624
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| || ||||    
T  11656453 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattacca-tttt 11656551  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctcc-aaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||| ||||||||||||||||  |||||||||||||||||    
T  11656552 tgttgcatttttcgtccta--ccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccc 11656624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 553 - 726
Target Start/End: Original strand, 31133217 - 31133387
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||| ||||| ||||| |||    
T  31133217 ataggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatca-ttt 31133315  T
Q  653 ttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
    ||||||||||||||||||||        ||||||||||||||||||| |||||||| |||||||||||||||||    
T  31133316 ttgttgcatttttcgtccta--ccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 31133387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 555 - 727
Target Start/End: Complemental strand, 9930203 - 9930034
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| ||||| |||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatca-ttttt 9930105  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||        |||||||||||||||| ||||||||||| | ||||||||||||||||    
T  9930104 gttgcatttttcgtccta--ccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccc 9930034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 555 - 672
Target Start/End: Complemental strand, 13225185 - 13225069
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 13225087  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||||||||||    
T  13225086 gttgcatttttcgtccta 13225069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 554 - 670
Target Start/End: Original strand, 19176288 - 19176403
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  19176288 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttt 19176386  T
Q  654 tgttgcatttttcgtcc 670  Q
    |||||||||||||||||    
T  19176387 tgttgcatttttcgtcc 19176403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 560 - 727
Target Start/End: Original strand, 13224645 - 13224808
Alignment:
Q  560 taattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgc 659  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||  || ||||||||||| |||||||||     
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggt-ctgcccttttaaaacagaacaaaacaatccttcaattatca-tttttgttga 13224742  T
Q  660 atttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  13224743 atttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 13224808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 41681679 - 41681564
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcat-ttttg 41681581  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  41681580 ttgcatttttcgtccta 41681564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 34541095 - 34540978
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||| |||    
T  34541095 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcat-ttt 34540997  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  34540996 tgttgcatttttcgtccta 34540978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 556 - 726
Target Start/End: Complemental strand, 9178180 - 9178014
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||| ||||| ||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatca-tttttg 9178082  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
    ||||||||||| || ||        ||||||||||| |||||||||||||||| ||| |||||||||||||    
T  9178081 ttgcatttttcatctta---cccccattttattctcaaaaaacgcagagaaatgacaattttagacctacc 9178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 559 - 672
Target Start/End: Original strand, 9928912 - 9929024
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 9929010  T
Q  659 catttttcgtccta 672  Q
    ||||||||||||||    
T  9929011 catttttcgtccta 9929024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 555 - 672
Target Start/End: Complemental strand, 11657003 - 11656887
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||||||| ||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcat-tttt 11656905  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||||||||||    
T  11656904 gttgcatttttcgtccta 11656887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 555 - 672
Target Start/End: Original strand, 44831246 - 44831362
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatca-ttttt 44831344  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||||||||||    
T  44831345 gttgcatttttcgtccta 44831362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 557 - 669
Target Start/End: Complemental strand, 31133764 - 31133653
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | |||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatta-tttttgt 31133666  T
Q  657 tgcatttttcgtc 669  Q
    |||||||||||||    
T  31133665 tgcatttttcgtc 31133653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 554 - 672
Target Start/End: Original strand, 33742920 - 33743036
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||| ||||    
T  33742920 taggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatca-tttt 33743017  T
Q  654 tgttgcatttttcgtccta 672  Q
    || ||||||||||||||||    
T  33743018 tgatgcatttttcgtccta 33743036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 559 - 672
Target Start/End: Complemental strand, 12572393 - 12572281
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcat-ttttgttg 12572295  T
Q  659 catttttcgtccta 672  Q
    ||||||||||||||    
T  12572294 catttttcgtccta 12572281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 554 - 669
Target Start/End: Original strand, 4629795 - 4629909
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    ||||||||||| ||||||| || ||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatca-tttt 4629893  T
Q  654 tgttgcatttttcgtc 669  Q
    | ||||||||||||||    
T  4629894 tattgcatttttcgtc 4629909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 554 - 665
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| || |||||||||||| ||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||| |||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcat-ttt 11336971  T
Q  654 tgttgcattttt 665  Q
    ||||||||||||    
T  11336970 tgttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 558 - 670
Target Start/End: Complemental strand, 33328683 - 33328572
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||| ||||||| |||||||||||| |||||||||||||||| ||| ||| ||||||||||| |||||||||||| |||||||||||| |||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcat-ttttgtt 33328585  T
Q  658 gcatttttcgtcc 670  Q
    |||||||||||||    
T  33328584 gcatttttcgtcc 33328572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 559 - 727
Target Start/End: Complemental strand, 4630328 - 4630169
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||||||||  ||||||||||||| | ||||||| ||||||||       ||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta-------ttgttg 4630236  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||| |||||        ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4630235 catttttcatccta--ccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccc 4630169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 603 - 725
Target Start/End: Complemental strand, 33743417 - 33743298
Alignment:
Q  603 tggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcag 702  Q
    |||| ||||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcat-ttttgttgcatttttcgtccta--ccccccattttattctccaaaaacgcag 33743321  T
Q  703 agaaataacagttttagacctac 725  Q
    |||||||||||||||||||||||    
T  33743320 agaaataacagttttagacctac 33743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 446 - 543
Target Start/End: Original strand, 36612658 - 36612751
Alignment:
Q  446 cttttgagagaacctatagatttatgaagagaacaatttattaattaaattttactcacccatgtatcgtttccccataaaaatcggaaagttaatac 543  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    |||||||||||||||||||||||  |||||||||||||    
T  36612658 cttttaagagaacctatagatttatgaagagaacaatttatttattaaattttact----catgtatcgtttccccataaaaactggaaagttaatac 36612751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 555 - 669
Target Start/End: Complemental strand, 8074097 - 8073985
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||| ||| ||||||| |||||||||||||||||| |||||||| || || || ||||||||||||||||||||   || |||||||||||  ||||    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca--tttt 8074000  T
Q  655 gttgcatttttcgtc 669  Q
    |||||||||| ||||    
T  8073999 gttgcattttacgtc 8073985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 554 - 666
Target Start/End: Original strand, 10918124 - 10918235
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||| ||||||||| ||||  |||||||||||||  |||||||||||| ||||| ||||   |||||||||| |||||  ||| ||||| ||||| ||||    
T  10918124 taggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatca-tttt 10918222  T
Q  654 tgttgcatttttc 666  Q
    |||||||||||||    
T  10918223 tgttgcatttttc 10918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 589
Target Start/End: Original strand, 9177664 - 9177700
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggc 589  Q
    ||||||||||||||||||||| |||||||||||||||    
T  9177664 ataggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 555 - 596
Target Start/End: Complemental strand, 10919732 - 10919691
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactca 596  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||    
T  10919732 aggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 631
Target Start/End: Complemental strand, 35427360 - 35427283
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 631  Q
    |||||||||||||||||||| ||||||  ||||| || |||||||||| |||| || ||  ||| |||| ||||||||    
T  35427360 taggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaa 35427283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 2e-66; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 18183516 - 18183346
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  18183516 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 18183418  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  18183417 tgttgcatttttcgtccta--cccctcattttattctccaaaaacgcagagaaataacagttttagacctaccc 18183346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 552 - 727
Target Start/End: Complemental strand, 2865304 - 2865132
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  2865304 aataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-t 2865206  T
Q  652 tttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||| ||||||||||||||        ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  2865205 tttgtttcatttttcgtccta--ccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 2865132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 556 - 727
Target Start/End: Complemental strand, 5819474 - 5819306
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat-ttttg 5819376  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||        ||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  5819375 ttgcatttttcgtccta--ccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccc 5819306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 556 - 727
Target Start/End: Original strand, 8647438 - 8647606
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||| ||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatca-tttttg 8647536  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  8647537 ttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 8647606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 556 - 727
Target Start/End: Original strand, 19359136 - 19359304
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatca-tttttg 19359234  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||        |||||||||||||||||||||||||||| |||||| |||||||||||    
T  19359235 ttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccc 19359304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 553 - 727
Target Start/End: Original strand, 8460927 - 8461098
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    |||||||||||| |||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8460927 ataggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatca-ttt 8461025  T
Q  653 ttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||| ||        ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  8461026 ttgttgcatttttcgtcata--ccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccc 8461098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 15708969 - 15709138
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||| ||||    
T  15708969 taggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatca-tttt 15709067  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||| ||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  15709068 tgttgcatatttcgtccta---cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 15709138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 554 - 721
Target Start/End: Complemental strand, 24362383 - 24362219
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatca-tttt 24362285  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagac 721  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||    
T  24362284 tgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagac 24362219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 554 - 726
Target Start/End: Complemental strand, 15372420 - 15372251
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  15372420 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatca-tttt 15372322  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
    |||||||||||| || |||        |||||||| ||||||||||||||||||| |||||||||||||||||    
T  15372321 tgttgcattttttgttcta--catcccattttattttccaaaaacgcagagaaatgacagttttagacctacc 15372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 555 - 726
Target Start/End: Complemental strand, 29455288 - 29455120
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    |||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcat-tttt 29455190  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
    ||||||||||||||||||        ||||||||||||||||||| |||||||| |||||||||||| ||||    
T  29455189 gttgcatttttcgtccta--ccccccattttattctccaaaaacgtagagaaatgacagttttagacatacc 29455120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 14215790 - 14215620
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  14215790 taggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatca-tttt 14215692  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||| ||        ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  14215691 tgttgcatttttcgtctta--acccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 14215620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 553 - 672
Target Start/End: Complemental strand, 19359684 - 19359566
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  19359684 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tt 19359586  T
Q  653 ttgttgcatttttcgtccta 672  Q
    |||||| |||||||||||||    
T  19359585 ttgttggatttttcgtccta 19359566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 551 - 669
Target Start/End: Original strand, 5818924 - 5819041
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 650  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  5818924 taataggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatca-t 5819022  T
Q  651 ttttgttgcatttttcgtc 669  Q
    |||||||||||||||||||    
T  5819023 ttttgttgcatttttcgtc 5819041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 554 - 669
Target Start/End: Complemental strand, 8647985 - 8647871
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||    
T  8647985 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 8647887  T
Q  654 tgttgcatttttcgtc 669  Q
    ||||||||||||||||    
T  8647886 tgttgcatttttcgtc 8647871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 164738 - 164568
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||| | ||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||| |||    
T  164738 taggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 164640  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||| ||||||        ||||||||||||||||| | |||||||| ||||||||||||||||||    
T  164639 tgttgcattttttgtccta--ccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccc 164568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 552 - 672
Target Start/End: Original strand, 18182966 - 18183085
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||| ||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||    
T  18182966 aataggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-tt 18183064  T
Q  652 tttgttgcatttttcgtccta 672  Q
    |||||||||||||||||||||    
T  18183065 tttgttgcatttttcgtccta 18183085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 554 - 672
Target Start/End: Original strand, 24331557 - 24331676
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc-atttt 652  Q
    |||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  24331557 taggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctatttt 24331656  T
Q  653 ttgttgcatttttcgtccta 672  Q
    |||||||||||||| |||||    
T  24331657 ttgttgcatttttcatccta 24331676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 556 - 672
Target Start/End: Original strand, 164191 - 164305
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||  |||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca--ttttg 164288  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  164289 ttgcatttttcgtccta 164305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 555 - 669
Target Start/End: Complemental strand, 8461477 - 8461364
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcat-tttt 8461379  T
Q  655 gttgcatttttcgtc 669  Q
    | |||||||||||||    
T  8461378 gctgcatttttcgtc 8461364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 554 - 724
Target Start/End: Complemental strand, 14464067 - 14463901
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||  |  || |||||||||| ||||||||||| || ||||||||||| ||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatca-tttt 14463969  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagaccta 724  Q
    | |||||||||||||||||        |||||||||||||||||||||||||||| |||||||||||||||    
T  14463968 tattgcatttttcgtccta---ccccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 558 - 672
Target Start/End: Original strand, 2864756 - 2864869
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| |||| |||||||||||||||||||||| || || ||||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatca-tttttgtt 2864854  T
Q  658 gcatttttcgtccta 672  Q
    |||||||||||||||    
T  2864855 gcatttttcgtccta 2864869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 553 - 724
Target Start/End: Complemental strand, 24332112 - 24331940
Alignment:
Q  553 ataggcttaattacactttt-gatcctcgtgttttggcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtcattcaattatcatt 650  Q
    |||| ||||||||||||||| | || || ||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||||| | |||||||||||    
T  24332112 atagacttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcatt 24332013  T
Q  651 ttttgttgcat-ttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagaccta 724  Q
    ||||||||||| |||||||||||        ||| |||||||||||||||||||||||| |||||||||||||||    
T  24332012 ttttgttgcattttttcgtccta--ccccccattctattctccaaaaacgcagagaaatgacagttttagaccta 24331940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 558 - 670
Target Start/End: Original strand, 15371873 - 15371983
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatca-tttttgtt 15371970  T
Q  658 gcatttttcgtcc 670  Q
    |||||||||||||    
T  15371971 gcatttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 555 - 670
Target Start/End: Complemental strand, 25000635 - 25000521
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| || || ||||||||||||||||||||| ||||| ||  ||||||||||||||||||| ||||||||||||||||| ||||    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcat-tttt 25000537  T
Q  655 gttgcatttttcgtcc 670  Q
    ||||||||||||||||    
T  25000536 gttgcatttttcgtcc 25000521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 558 - 672
Target Start/End: Original strand, 14215243 - 14215356
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||| |||| |||| |||||| ||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatca-tttttgtt 14215341  T
Q  658 gcatttttcgtccta 672  Q
    |||||||||||||||    
T  14215342 gcatttttcgtccta 14215356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 555 - 672
Target Start/End: Original strand, 29454739 - 29454855
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    |||||||||| |||||||| || | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||||||| |||||    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatca-ttttt 29454837  T
Q  655 gttgcatttttcgtccta 672  Q
    | ||||||||||||||||    
T  29454838 gctgcatttttcgtccta 29454855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 557 - 672
Target Start/End: Complemental strand, 4222266 - 4222152
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||||||||||| |||||||||||||| || ||||||||| ||||| |||||||||||||||||||||||  |||||||| ||||||| |||| |    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcat-ttttat 4222168  T
Q  657 tgcatttttcgtccta 672  Q
    ||||||||||||||||    
T  4222167 tgcatttttcgtccta 4222152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 555 - 727
Target Start/End: Original strand, 16018588 - 16018755
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||| || || ||||||||||||| |||||||||||||| |||||||||   |||||    
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat--attttt 16018685  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
     ||||||||| |||||||        |||||||||||||||||   ||| |||| ||||||||||||||||||    
T  16018686 attgcattttccgtccta---cccccattttattctccaaaaatatagaaaaatgacagttttagacctaccc 16018755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 719
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  562 attacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcat 661  Q
    |||||||||||| ||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||| ||||| ||||| ||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatca-tttttgttgcat 24361941  T
Q  662 ttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttag 719  Q
    |||||||||||        ||||||||||||| |||||||||||||| | ||||||||    
T  24361942 ttttcgtccta--ccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 551 - 721
Target Start/End: Complemental strand, 16019137 - 16018969
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 650  Q
    ||||||| ||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||| ||||||||| |||| |||| |||  ||||||||||||     
T  16019137 taataggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcat- 16019039  T
Q  651 ttttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagac 721  Q
    |||||||| |||||||||||||         |||||  ||||| |||||||||||||| ||||||||||||    
T  16019038 ttttgttgtatttttcgtcctacctcctat-ttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 7349562 - 7349447
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||  || |||| ||||||| |||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcat-ttttg 7349464  T
Q  656 ttgcatttttcgtccta 672  Q
    ||||| ||||| |||||    
T  7349463 ttgcacttttcatccta 7349447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 562 - 719
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  562 attacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcat 661  Q
    |||||||||||| ||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||| ||||| ||||| ||||||| ||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatca-tttttgtcgcat 24325316  T
Q  662 ttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttag 719  Q
    |||||||||||        ||||||||||||| |||||||||||||| | ||||||||    
T  24325317 ttttcgtccta--ccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 15709513 - 15709399
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| || | ||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||||| || | |||||| ||| ||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgccc-tttaaaacagaacaaaacggtcctttagttatca-tttctg 15709416  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  15709415 ttgcatttttcgtccta 15709399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 578 - 726
Target Start/End: Original strand, 25000112 - 25000257
Alignment:
Q  578 tcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgtcctannnnn 677  Q
    |||||||||||||||||||||||  ||||| |||||| ||||||||||| |||| |||| || |||||||| ||||| |||||||||| ||||||         
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatca-tttttattgcattttttgtccta--ccc 25000208  T
Q  678 nnnattttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
       ||||||||||||||||||| |||||||| ||||||||||| |||||    
T  25000209 cccattttattctccaaaaacgtagagaaatgacagttttagatctacc 25000257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 556 - 653
Target Start/End: Original strand, 4623148 - 4623245
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||| || |||||||||| | ||||||||||| ||||||||||  |||||||||||||||||  ||| ||||||||||||||||    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcattttt 4623245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 556 - 672
Target Start/End: Original strand, 4219663 - 4219778
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    ||||||||||||||||||||||||||||||||| ||| | || ||| ||||| |||| |||||||||||||||||   ||| || | |||||| ||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatca-tttttg 4219761  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  4219762 ttgcatttttcgtccta 4219778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 556 - 672
Target Start/End: Original strand, 7348559 - 7348674
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||| ||||| ||||| |||||| | |||||||||||| ||||| ||||||||||||||||||||||||  || |||  |||||| ||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatca-tttttg 7348657  T
Q  656 ttgcatttttcgtccta 672  Q
    ||||| |||||||||||    
T  7348658 ttgcacttttcgtccta 7348674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 557 - 672
Target Start/End: Original strand, 6018315 - 6018428
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||||| ||||| | |||||||||||  |||||||||||||||||| || ||||||||||||||||||||   || ||||||||||| |||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattatc-ttcaattatca-tttttgt 6018412  T
Q  657 tgcatttttcgtccta 672  Q
    |||| |||| ||||||    
T  6018413 tgcagttttagtccta 6018428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 562 - 665
Target Start/End: Complemental strand, 6019309 - 6019208
Alignment:
Q  562 attacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcat 661  Q
    |||||| ||||| || || ||||||||| |||||||||||||| || ||| |||||||||||||||||||| ||| || ||||||||| |||||||||||    
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcat-ttttgttgcat 6019212  T
Q  662 tttt 665  Q
    ||||    
T  6019211 tttt 6019208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 575 - 672
Target Start/End: Complemental strand, 4624751 - 4624655
Alignment:
Q  575 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgtccta 672  Q
    ||||||||||||  ||||||||||||| ||||| || |  ||||||||| ||||||||  |||||||||||||| ||| |||||||||||||||||||    
T  4624751 tcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatca-tttatgttgcatttttcgtccta 4624655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 609
Target Start/End: Complemental strand, 15115640 - 15115585
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcct 609  Q
    ||||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  15115640 taggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcct 15115585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 607 - 672
Target Start/End: Complemental strand, 13814226 - 13814157
Alignment:
Q  607 cctgcccttttaaaacagaacaaaacggtca-----ttcaattatcattttttgttgcatttttcgtccta 672  Q
    |||||||||||||| ||||||||||| ||||     ||||||||||| ||||||||||| |||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatca-tttttgttgcacttttcgtccta 13814157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 635 - 672
Target Start/End: Original strand, 14462683 - 14462719
Alignment:
Q  635 tcattcaattatcattttttgttgcatttttcgtccta 672  Q
    |||||||||||||||||| |||||||||||||||||||    
T  14462683 tcattcaattatcatttt-tgttgcatttttcgtccta 14462719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 555 - 612
Target Start/End: Complemental strand, 41834606 - 41834549
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcc 612  Q
    ||||||||||||||||||| ||||||  ||||| ||  ||||||||| ||||||||||    
T  41834606 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcc 41834549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 125; Significance: 5e-64; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 4791 - 4961
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  4791 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-tttt 4889  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  4890 tgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 4961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 558 - 671
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| || ||||||||||||||| |||||||| ||||||||||||| |||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcat-ttttgtt 5236  T
Q  658 gcatttttcgtcct 671  Q
    ||||||||||||||    
T  5235 gcatttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 1e-61; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 25447783 - 25447613
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat-ttt 25447685  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  25447684 tgttgcatttttcgtccta--ccctccattttattctccaaaaacgcagagaaattacagttttagacctaccc 25447613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 12234327 - 12234497
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12234327 taggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatca-tttt 12234425  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||| ||||||||    
T  12234426 tgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccc 12234497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 556 - 727
Target Start/End: Complemental strand, 11153692 - 11153524
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||| |||||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcat-ttttg 11153594  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||    
T  11153593 ttgcatttttcgtccta--ccctccattttattctccaaaaacgcagagaaataacagttttagacttaccc 11153524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 25937668 - 25937838
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  25937668 taggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttt 25937766  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||| |||||         |||||||||||||||||||||||||||| ||||||||||||||||||    
T  25937767 tgttgcattttttgtcct--gtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 25937838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 22434723 - 22434555
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  22434723 taggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccatttt-aaacagaacaaaacggtcattcaattatca-tttt 22434626  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  22434625 tgttgcatttttcgtccta---cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 22434555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 558 - 727
Target Start/End: Original strand, 33109686 - 33109852
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatca-tttttgtt 33109784  T
Q  658 gcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  33109785 gcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 33109852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 558 - 727
Target Start/End: Complemental strand, 46193948 - 46193782
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||| ||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttatt 46193850  T
Q  658 gcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||        ||||||||||||||||||| |||||| | ||||||||||||||||||    
T  46193849 gcatttttcgtccta--ccccccattttattctccaaaaacgtagagaattgacagttttagacctaccc 46193782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 23494990 - 23494873
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  23494990 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 23494892  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  23494891 tgttgcatttttcgtccta 23494873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 553 - 727
Target Start/End: Complemental strand, 38962367 - 38962196
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    |||| |||||||||| ||||| |||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||    
T  38962367 atagacttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcat-tt 38962269  T
Q  653 ttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||||        |||||||||| ||||||||||||||||| ||||||||||||||||||    
T  38962268 ttgttgcatttttcgtccta--ccccccattttattcttcaaaaacgcagagaaatgacagttttagacctaccc 38962196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 559 - 727
Target Start/End: Complemental strand, 2118837 - 2118673
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| || |||||||||||||| |||| ||||||||||||  |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcat-ttttgttg 2118739  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||        |||||||||||||||||||||||||||||| ||||||||||||||||    
T  2118738 catttttcgtccta---cccccattttattctccaaaaacgcagagaaataatagttttagacctaccc 2118673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 553 - 672
Target Start/End: Original strand, 15523232 - 15523350
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  15523232 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttt 15523331  T
Q  653 ttgttgcatttttcgtccta 672  Q
    || |||||||||||||||||    
T  15523332 tt-ttgcatttttcgtccta 15523350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 555 - 727
Target Start/End: Complemental strand, 15523780 - 15523611
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||| |||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatca-ttttt 15523682  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||        ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  15523681 gttgcatttttcgtccta--ccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccc 15523611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 558 - 726
Target Start/End: Original strand, 23494445 - 23494610
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatca-tttttatt 23494543  T
Q  658 gcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
    |||||||||||||||        ||||||||||||||| |||||||||||| |||||||||||||||||    
T  23494544 gcatttttcgtccta--ccccccattttattctccaaacacgcagagaaatgacagttttagacctacc 23494610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 556 - 672
Target Start/End: Original strand, 25447247 - 25447362
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttg 25447345  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  25447346 ttgcatttttcgtccta 25447362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 51020795 - 51020965
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||||||||| |||||||||  | |||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||    
T  51020795 taggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatca-tttt 51020893  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||| |||||||| |||||||| ||||||||||||||||||    
T  51020894 tgttgcatttttcgtccta--ccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccc 51020965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 555 - 727
Target Start/End: Complemental strand, 22170482 - 22170314
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||| || ||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcat-tttt 22170385  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||| |||||||||||| |||||    
T  22170384 gttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccc 22170314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 555 - 727
Target Start/End: Original strand, 48526195 - 48526363
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| | ||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 48526293  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||        ||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  48526294 gttgcatttttcgtccta---cccccattttattctccaaaaatgcagagaaatgacagttttagatctaccc 48526363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 20471058 - 20470941
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||    
T  20471058 taggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcat-ttt 20470960  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  20470959 tgttgcatttttcgtccta 20470941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 558 - 724
Target Start/End: Original strand, 4219559 - 4219722
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||| ||||||||||| ||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatca-tttttgtt 4219657  T
Q  658 gcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagaccta 724  Q
    |||||||||||||||        |||||||||||||||||||||||||||| ||||||||| |||||    
T  4219658 gcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttaaaccta 4219722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 552 - 672
Target Start/End: Complemental strand, 51021344 - 51021226
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || ||||||||  |    
T  51021344 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca--t 51021247  T
Q  652 tttgttgcatttttcgtccta 672  Q
    |||||||||||||||||||||    
T  51021246 tttgttgcatttttcgtccta 51021226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 556 - 672
Target Start/End: Original strand, 22434179 - 22434294
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttg 22434277  T
Q  656 ttgcatttttcgtccta 672  Q
    ||| |||||||||||||    
T  22434278 ttgtatttttcgtccta 22434294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 45082969 - 45082854
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttg 45082871  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  45082870 ttgcatttttcgtccta 45082854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 556 - 672
Target Start/End: Original strand, 46193405 - 46193520
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatca-tttttg 46193503  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  46193504 ttgcatttttcgtccta 46193520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 4220106 - 4219989
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||| |||    
T  4220106 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcat-ttt 4220008  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  4220007 tgttgcatttttcgtccta 4219989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 12234874 - 12234759
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||| |||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttg 12234776  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  12234775 ttgcatttttcgtccta 12234759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 552 - 672
Target Start/End: Complemental strand, 33110013 - 33109894
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| |    
T  33110013 aataggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcat-t 33109915  T
Q  652 tttgttgcatttttcgtccta 672  Q
    |||||||||||||||||||||    
T  33109914 tttgttgcatttttcgtccta 33109894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 552 - 672
Target Start/End: Original strand, 54995065 - 54995184
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||    
T  54995065 aataggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatca-tt 54995163  T
Q  652 tttgttgcatttttcgtccta 672  Q
    |||||||||||||||||||||    
T  54995164 tttgttgcatttttcgtccta 54995184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 554 - 726
Target Start/End: Complemental strand, 54995614 - 54995446
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||| ||||| |||||  |||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca--ttt 54995517  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
    |||||||||||||||||||        ||||||||||| ||||||||| |||||| | |||||||||||||||    
T  54995516 tgttgcatttttcgtccta--acccccattttattctctaaaaacgcaaagaaatgatagttttagacctacc 54995446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 558 - 671
Target Start/End: Complemental strand, 18764063 - 18763951
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||| ||||| ||||||||    
T  18764063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatca-tttttgtt 18763965  T
Q  658 gcatttttcgtcct 671  Q
    ||||||||||||||    
T  18763964 gcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 555 - 672
Target Start/End: Complemental strand, 25938217 - 25938101
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcat-tttt 25938119  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||| ||||||    
T  25938118 gttgcattttttgtccta 25938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 556 - 668
Target Start/End: Complemental strand, 35363146 - 35363034
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| | |||||||||||||||||||||||| |||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatca-ttttt 35363048  T
Q  655 gttgcatttttcgt 668  Q
    ||||||||||||||    
T  35363047 gttgcatttttcgt 35363034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 559 - 672
Target Start/End: Complemental strand, 48526723 - 48526611
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatca-cttttgttg 48526625  T
Q  659 catttttcgtccta 672  Q
    ||||||||||||||    
T  48526624 catttttcgtccta 48526611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 45082430 - 45082598
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||| |||||||| |||||| || ||||||||||| ||||||||||| |||||  ||||||||||||| |||||||||||||| ||||||||||| ||||    
T  45082430 taggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatca-tttt 45082527  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  45082528 tgttgcatttttcgtccta---cccccattttattctccaaaaacacagagaaatgacaattttagacctaccc 45082598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 559 - 670
Target Start/End: Original strand, 18751602 - 18751712
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatca-tttttgttg 18751700  T
Q  659 catttttcgtcc 670  Q
    ||||||||||||    
T  18751701 catttttcgtcc 18751712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 558 - 672
Target Start/End: Original strand, 2118295 - 2118408
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||  ||| ||||||||||| ||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatca-tttttgtt 2118393  T
Q  658 gcatttttcgtccta 672  Q
    |||||||||||||||    
T  2118394 gcatttttcgtccta 2118408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 555 - 672
Target Start/End: Original strand, 11153145 - 11153261
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||||| |||| ||||||||| ||||||||||| |||||    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatca-ttttt 11153243  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||||||||||    
T  11153244 gttgcatttttcgtccta 11153261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 557 - 672
Target Start/End: Complemental strand, 44892692 - 44892578
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||| | ||||| ||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||| ||| ||||||||| |||||||||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattat-attttttgt 44892594  T
Q  657 tgcatttttcgtccta 672  Q
    ||||||||||||||||    
T  44892593 tgcatttttcgtccta 44892578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 557 - 665
Target Start/End: Complemental strand, 20958403 - 20958296
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||   ||| |||||||||||| ||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcat-ttttgt 20958305  T
Q  657 tgcattttt 665  Q
    |||||||||    
T  20958304 tgcattttt 20958296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 552 - 671
Target Start/End: Complemental strand, 48713895 - 48713777
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||| |||||||||||||| || |||||||||| ||||||||| |||| ||||| ||| |||||||||||||||||||  ||| |||||||||||| |    
T  48713895 aataggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcat-t 48713797  T
Q  652 tttgttgcatttttcgtcct 671  Q
    ||||||||||||||||||||    
T  48713796 tttgttgcatttttcgtcct 48713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 552 - 663
Target Start/End: Original strand, 48708291 - 48708401
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||||||||||||||||||| |||  |||||||||||||  ||||||| || |||||||||||||||||| |||||||| ||| ||||||||||| ||    
T  48708291 aataggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatca-tt 48708389  T
Q  652 tttgttgcattt 663  Q
    ||||||||||||    
T  48708390 tttgttgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 575 - 672
Target Start/End: Complemental strand, 43243806 - 43243710
Alignment:
Q  575 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgtccta 672  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||  |||||||||||| ||||||||||||||| ||||||    
T  43243806 tcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcat-ttttgttgcattttttgtccta 43243710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 555 - 626
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaa 626  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 653
Target Start/End: Complemental strand, 10258433 - 10258335
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||||||||||||||  ||||  ||  ||||||||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcattttt 10258335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 553 - 671
Target Start/End: Original strand, 48293591 - 48293708
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| || ||||| |  ||||||||| |||||||  ||  ||||||||||| |||    
T  48293591 ataggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatca-ttt 48293689  T
Q  653 ttgttgcatttttcgtcct 671  Q
    |||||||||||||| ||||    
T  48293690 ttgttgcatttttcatcct 48293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 575 - 672
Target Start/End: Original strand, 12503455 - 12503551
Alignment:
Q  575 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgtccta 672  Q
    ||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||    
T  12503455 tcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatca-tttttgttgcatttttcgtccta 12503551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 575 - 672
Target Start/End: Complemental strand, 43281316 - 43281221
Alignment:
Q  575 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgtccta 672  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||  |||||||||   |||||||||||||||||||||||    
T  43281316 tcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat--atttttgttgcatttttcgtccta 43281221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 556 - 666
Target Start/End: Complemental strand, 48295088 - 48294979
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||| ||||| || ||||||||||  |||||||||||| ||||| ||||  ||||||||| |||||||  |||||||||||||||| |||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcat-ttttg 48294990  T
Q  656 ttgcatttttc 666  Q
    |||||||||||    
T  48294989 ttgcatttttc 48294979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 559 - 672
Target Start/End: Original strand, 16690939 - 16691051
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||| ||||| |||| ||||||||  |||||||||||| ||||||||||  ||||||||| |||||||   || ||||||||||| |||||||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatca-tttttgttg 16691037  T
Q  659 catttttcgtccta 672  Q
    ||||||||||||||    
T  16691038 catttttcgtccta 16691051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 557 - 666
Target Start/End: Original strand, 44890518 - 44890626
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||||| ||||| |||| |||||||| |||| |||||||| ||||| |||||||||||||||||||||||   || || |||||| |||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattat-attttttgt 44890616  T
Q  657 tgcatttttc 666  Q
    ||||||||||    
T  44890617 tgcatttttc 44890626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 624 - 727
Target Start/End: Complemental strand, 12503913 - 12503813
Alignment:
Q  624 gaacaaaacggtcattcaattatcattttttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacct 723  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcattttt-gttgcatttttcgtcatacccccc--attttattctccaaaaacgcagagaaatgacagttttagacct 12503817  T
Q  724 accc 727  Q
    ||||    
T  12503816 accc 12503813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 614 - 672
Target Start/End: Original strand, 43242328 - 43242385
Alignment:
Q  614 ttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgtccta 672  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcatttttt-ttgcatttttcgtccta 43242385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 556 - 669
Target Start/End: Complemental strand, 16691616 - 16691505
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||| |||||||| ||| || ||||| |||||||  ||| || |||||| | ||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctg-cctctttaaacataacaaaattgtcctttaattatta-tttttg 16691519  T
Q  656 ttgcatttttcgtc 669  Q
    ||||||||||||||    
T  16691518 ttgcatttttcgtc 16691505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 669
Target Start/End: Original strand, 20957196 - 20957301
Alignment:
Q  563 ttacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatt 662  Q
    ||||| ||||| |||||| |||||||| ||||||||||| ||||| | | ||||||||||| |||||||  ||| |||||||||||  ||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatca-attttgttgcatt 20957294  T
Q  663 tttcgtc 669  Q
    |||||||    
T  20957295 tttcgtc 20957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 556 - 653
Target Start/End: Original strand, 55189528 - 55189625
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||| | ||||||||||||||||||| |||| |||  ||| ||||  ||||||||||||| |||||||||  ||| ||||||||||||||||    
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcattttt 55189625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 681 - 727
Target Start/End: Complemental strand, 18752025 - 18751979
Alignment:
Q  681 attttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  18752025 attttattctccaaaaatgcagagaaataacagttttagacctaccc 18751979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 609
Target Start/End: Complemental strand, 55677505 - 55677451
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcct 609  Q
    ||||||||||||||||||| |||| || ||||| || |||||||||| |||||||    
T  55677505 aggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcct 55677451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 5e-61; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 551 - 727
Target Start/End: Original strand, 19830415 - 19830588
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 650  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |    
T  19830415 taataggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatca-t 19830513  T
Q  651 ttttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  19830514 ttttgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 19830588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 552 - 727
Target Start/End: Complemental strand, 35289450 - 35289278
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  35289450 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tt 35289352  T
Q  652 tttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    || ||||||||||||||| ||        ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  35289351 ttggttgcatttttcgtcata--ccccccattttattctctaaaaacgcagagaaataatagttttagacctaccc 35289278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 555 - 727
Target Start/End: Original strand, 37786766 - 37786935
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatca-ttttt 37786864  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  37786865 gttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 37786935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 556 - 727
Target Start/End: Original strand, 19590525 - 19590693
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttg 19590623  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||| |||||        |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  19590624 ttgcatttttcatccta--ccccccattttattctccaaaaacccagagaaatgacagttttagacctaccc 19590693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 555 - 727
Target Start/End: Original strand, 38858642 - 38858811
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatca-ttttt 38858740  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||| ||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  38858741 gttgcatttttggtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 38858811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 559 - 727
Target Start/End: Complemental strand, 29100393 - 29100228
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat-ttttgttg 29100295  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||| ||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  29100294 cattttttgtccta--ccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 29100228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 552 - 727
Target Start/End: Complemental strand, 4478249 - 4478077
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |  ||| |||||||||||| |    
T  4478249 aataggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcat-t 4478151  T
Q  652 tttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  4478150 tttgttgcatttttcgtctta--tccctcattttattctccaaaaacgcagagaaataacagttttagacctaccc 4478077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 2659387 - 2659217
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||| ||||| |||||| ||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  2659387 taggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcat-ttt 2659289  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||| |||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  2659288 tgttgcatttttcatccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 2659217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 556 - 727
Target Start/End: Complemental strand, 32005159 - 32004991
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||| |||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcat-ttttg 32005061  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  32005060 ttgcatttttcgtccta--ctccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 32004991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 554 - 726
Target Start/End: Complemental strand, 34534338 - 34534169
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||| ||||||| | |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||| |||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcat-ttt 34534240  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
    |||||||||||||||||||        |||||||||||||||||  ||||||||| |||||||||||||||||    
T  34534239 tgttgcatttttcgtccta--ccccccattttattctccaaaaaaacagagaaatgacagttttagacctacc 34534169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 19591072 - 19590955
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  19591072 taggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 19590974  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  19590973 tgttgcatttttcgtccta 19590955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 559 - 723
Target Start/End: Original strand, 4641443 - 4641604
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| |||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatca-tttttgttg 4641541  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacct 723  Q
    ||||||||||||||        ||||||||||||||||| |||||||||| | ||||||||||||    
T  4641542 catttttcgtccta--ccccccattttattctccaaaaatgcagagaaatgatagttttagacct 4641604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 552 - 727
Target Start/End: Complemental strand, 23953277 - 23953106
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||||||| ||||| ||||| |||||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||| |    
T  23953277 aataggctta-ttacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcat-t 23953180  T
Q  652 tttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||| ||        ||||||||||||||||||||||||||||||||||||||||| |||||    
T  23953179 tttgttgcatttttcgtcata--ccccccattttattctccaaaaacgcagagaaataacagttttagacataccc 23953106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 38859188 - 38859071
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| |||    
T  38859188 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcat-ttt 38859090  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  38859089 tgttgcatttttcgtccta 38859071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 556 - 672
Target Start/End: Original strand, 35288903 - 35289018
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatca-tttttg 35289001  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  35289002 ttgcatttttcgtccta 35289018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 554 - 669
Target Start/End: Original strand, 2658837 - 2658951
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||    
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatca-tttt 2658935  T
Q  654 tgttgcatttttcgtc 669  Q
    ||||||||||||||||    
T  2658936 tgttgcatttttcgtc 2658951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 553 - 672
Target Start/End: Original strand, 32004611 - 32004729
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||| |||    
T  32004611 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatca-ttt 32004709  T
Q  653 ttgttgcatttttcgtccta 672  Q
    ||||||||||||||| ||||    
T  32004710 ttgttgcatttttcgcccta 32004729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 553 - 672
Target Start/End: Original strand, 34533788 - 34533906
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||||||||||||||| |||    
T  34533788 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatca-ttt 34533886  T
Q  653 ttgttgcatttttcgtccta 672  Q
    |||||||||||| |||||||    
T  34533887 ttgttgcattttccgtccta 34533906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 37787314 - 37787197
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||| |||    
T  37787314 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcat-ttt 37787216  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  37787215 tgttgcatttttcgtccta 37787197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 569 - 672
Target Start/End: Original strand, 29099863 - 29099965
Alignment:
Q  569 ttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgt 668  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttgcatttttcgt 29099961  T
Q  669 ccta 672  Q
    ||||    
T  29099962 ccta 29099965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 554 - 672
Target Start/End: Original strand, 23952728 - 23952846
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcc-tactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| |||    
T  23952728 taggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-ttt 23952826  T
Q  653 ttgttgcatttttcgtccta 672  Q
    | ||||||||||||||||||    
T  23952827 tggttgcatttttcgtccta 23952846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 555 - 665
Target Start/End: Complemental strand, 19830965 - 19830856
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||  |||||||||||| ||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcat-tttt 19830867  T
Q  655 gttgcattttt 665  Q
    |||||||||||    
T  19830866 gttgcattttt 19830856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 559 - 672
Target Start/End: Complemental strand, 4641983 - 4641874
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| |||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcat-ttttgttg 4641888  T
Q  659 catttttcgtccta 672  Q
    ||| ||||||||||    
T  4641887 catatttcgtccta 4641874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 554 - 672
Target Start/End: Original strand, 38160949 - 38161066
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||  ||| ||||||||| | ||||    
T  38160949 taggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattatta-tttt 38161047  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  38161048 tgttgcatttttcgtccta 38161066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 551 - 672
Target Start/End: Original strand, 28583434 - 28583554
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 650  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || | |||| |||||||||||||||| || ||||| ||| ||||||||||| |    
T  28583434 taataggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatca-t 28583532  T
Q  651 ttttgttgcatttttcgtccta 672  Q
    |||| |||||||||||||||||    
T  28583533 ttttattgcatttttcgtccta 28583554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 557 - 669
Target Start/End: Complemental strand, 28584466 - 28584355
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||||||||||  |||||||| ||||||||| |||||||| ||||| || ||||||||||||||||||||  ||| |||||||||||| ||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcat-ttttgt 28584368  T
Q  657 tgcatttttcgtc 669  Q
    || ||||||||||    
T  28584367 tgtatttttcgtc 28584355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 555 - 620
Target Start/End: Complemental strand, 39137080 - 39137014
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaa 620  Q
    ||||||||||||||||||||||||||| ||||| ||  ||||||||| |||||||||| ||||||||    
T  39137080 aggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaa 39137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 607
Target Start/End: Original strand, 5333875 - 5333931
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtc 607  Q
    |||||||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  5333875 taataggcttaattacacttttgatccttgcattttgaccaactcacgaaaatggtc 5333931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 693 - 727
Target Start/End: Complemental strand, 32427432 - 32427398
Alignment:
Q  693 aaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||| ||||||||||||||||||    
T  32427432 aaaaacgcagagaaatgacagttttagacctaccc 32427398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 693 - 727
Target Start/End: Complemental strand, 35579298 - 35579264
Alignment:
Q  693 aaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||| ||||||||||||||||||||||||    
T  35579298 aaaaacgcagggaaataacagttttagacctaccc 35579264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 609
Target Start/End: Complemental strand, 26048492 - 26048439
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcct 609  Q
    |||||||||||||||||| |||| | |||||| || |||||||||| |||||||    
T  26048492 ggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcct 26048439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 5e-61; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 551 - 727
Target Start/End: Original strand, 11090516 - 11090689
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 650  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |    
T  11090516 taataggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatca-t 11090614  T
Q  651 ttttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  11090615 ttttgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 11090689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 551 - 724
Target Start/End: Original strand, 22374315 - 22374485
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 650  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |    
T  22374315 taataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-t 22374413  T
Q  651 ttttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagaccta 724  Q
    ||||||||||||||||||||||        ||||||||||||||||||||| |||||| | |||||||||||||    
T  22374414 ttttgttgcatttttcgtccta--ccccccattttattctccaaaaacgcaaagaaatgatagttttagaccta 22374485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 555 - 727
Target Start/End: Original strand, 40027139 - 40027308
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 40027237  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||| ||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  40027238 gttgcattttttgtccta--ccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 40027308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 554 - 724
Target Start/End: Original strand, 239351 - 239517
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  239351 taggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctg-ccttttaaaacagaacaaaacggtccttcaattatca-tttt 239448  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagaccta 724  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| |||||||||||||||    
T  239449 tgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 239517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 1978106 - 1978276
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttt 1978204  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||| |||||         |||||||||||||||||||||||||||| ||||||||||||||||||    
T  1978205 tgttgcattttttgtcct--gtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 1978276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 555 - 724
Target Start/End: Original strand, 26538096 - 26538262
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatca-ttttt 26538194  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagaccta 724  Q
    ||||||||||||||||||        |||||||||||||||||| |||||||||||||||||||||||||    
T  26538195 gttgcatttttcgtccta--ccccccattttattctccaaaaacacagagaaataacagttttagaccta 26538262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 40815892 - 40815722
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| | |||||||||||| |||    
T  40815892 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcat-ttt 40815794  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  40815793 tgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 40815722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 556 - 727
Target Start/End: Original strand, 43058333 - 43058501
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatca-tttttg 43058431  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||| |||        ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  43058432 ttgcatttttcgttcta--ccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccc 43058501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 18451378 - 18451208
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||| ||||| ||||| ||||    
T  18451378 taggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatca-tttt 18451280  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||| |||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  18451279 tgttgcatttttcttccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 18451208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 556 - 727
Target Start/End: Original strand, 28616613 - 28616782
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatca-tttttg 28616711  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctcc-aaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||| |||||||||||        |||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  28616712 ttgcaattttcgtccta--ccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccc 28616782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 555 - 715
Target Start/End: Original strand, 7446341 - 7446497
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatca-ttttt 7446439  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagtt 715  Q
     |||||||||||||| ||        |||||||||||||||||||||||||||| ||||||    
T  7446440 attgcatttttcgtcata---cccccattttattctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 26538626 - 26538509
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||    
T  26538626 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcat-ttt 26538528  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  26538527 tgttgcatttttcgtccta 26538509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 562 - 727
Target Start/End: Original strand, 3025472 - 3025633
Alignment:
Q  562 attacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcat 661  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatca-tttttgttgcat 3025570  T
Q  662 ttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||        ||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  3025571 ttttcgtccta---cccccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccc 3025633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 559 - 727
Target Start/End: Original strand, 14432145 - 14432310
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| | |||||||||||| ||||| ||||| |||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatca-tttttgttg 14432243  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||| ||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  14432244 catttttggtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 14432310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 43058879 - 43058763
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||  |||    
T  43058879 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca--ttt 43058782  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  43058781 tgttgcatttttcgtccta 43058763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 7446893 - 7446776
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  7446893 taggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 7446795  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  7446794 tgttgcatttttcgtccta 7446776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 20440578 - 20440461
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  20440578 taggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcat-ttt 20440480  T
Q  654 tgttgcatttttcgtccta 672  Q
    ||||||| |||||||||||    
T  20440479 tgttgcagttttcgtccta 20440461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 22374872 - 22374755
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||    
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 22374774  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  22374773 tgttgcatttttcgtccta 22374755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 555 - 672
Target Start/End: Original strand, 18450829 - 18450945
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  655 gttgcatttttcgtccta 672  Q
     |||||||||| ||||||    
T  18450929 -ttgcatttttagtccta 18450945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 559 - 672
Target Start/End: Complemental strand, 40027682 - 40027570
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat-ttttgttg 40027584  T
Q  659 catttttcgtccta 672  Q
    ||||||||||||||    
T  40027583 catttttcgtccta 40027570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 552 - 672
Target Start/End: Complemental strand, 11091069 - 11090950
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||    
T  11091069 aataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-tt 11090971  T
Q  652 tttgttgcatttttcgtccta 672  Q
     |||||| |||||||||||||    
T  11090970 attgttgtatttttcgtccta 11090950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 559 - 727
Target Start/End: Complemental strand, 8425902 - 8425737
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| | || ||||||||| |||||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcat-ttttgttg 8425804  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  8425803 catttttcgtctta--cccccaattttattctccaaaaacgcagagaaatgacagttttagacctaccc 8425737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 555 - 672
Target Start/End: Original strand, 20444748 - 20444864
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatca-ttttt 20444846  T
Q  655 gttgcatttttcgtccta 672  Q
    |||||| |||||||||||    
T  20444847 gttgcagttttcgtccta 20444864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 553 - 672
Target Start/End: Complemental strand, 1978657 - 1978539
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||    
T  1978657 ataggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcat-tt 1978559  T
Q  653 ttgttgcatttttcgtccta 672  Q
    ||||||||||||| ||||||    
T  1978558 ttgttgcattttttgtccta 1978539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 553 - 672
Target Start/End: Complemental strand, 28847243 - 28847125
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||| ||    
T  28847243 ataggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcat-tt 28847145  T
Q  653 ttgttgcatttttcgtccta 672  Q
    ||||||||||||||||||||    
T  28847144 ttgttgcatttttcgtccta 28847125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 557 - 672
Target Start/End: Complemental strand, 35781207 - 35781093
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  || |||||||||||| ||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcat-ttttgt 35781109  T
Q  657 tgcatttttcgtccta 672  Q
    ||||||||||||||||    
T  35781108 tgcatttttcgtccta 35781093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 555 - 669
Target Start/End: Complemental strand, 28617160 - 28617047
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||| ||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcat-tttt 28617062  T
Q  655 gttgcatttttcgtc 669  Q
    |||||||||||||||    
T  28617061 gttgcatttttcgtc 28617047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 558 - 672
Target Start/End: Original strand, 40815347 - 40815460
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||||| ||||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatca-tttttgtt 40815445  T
Q  658 gcatttttcgtccta 672  Q
    |||||||||||||||    
T  40815446 gcatttttcgtccta 40815460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 557 - 669
Target Start/End: Complemental strand, 239896 - 239785
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcat-ttttgt 239798  T
Q  657 tgcatttttcgtc 669  Q
    ||| |||||||||    
T  239797 tgcgtttttcgtc 239785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 556 - 672
Target Start/End: Original strand, 35779708 - 35779823
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||  ||| ||||||||||| ||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatca-tttttg 35779806  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||| ||||||    
T  35779807 ttgcattttttgtccta 35779823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 558 - 668
Target Start/End: Original strand, 8972239 - 8972348
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| ||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||||||  ||||||||||||||| ||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatca-tttttgtt 8972337  T
Q  658 gcatttttcgt 668  Q
    |||||||||||    
T  8972338 gcatttttcgt 8972348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 559 - 672
Target Start/End: Original strand, 8425358 - 8425469
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| |||| |||||||||||||||||||||| ||||| | || ||||||||||||||||||||||| ||||||||||| ||| |||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatca-tttgtgttg 8425455  T
Q  659 catttttcgtccta 672  Q
    ||||||||||||||    
T  8425456 catttttcgtccta 8425469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 3026006 - 3025893
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||| ||||||||| | ||||||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattatta-tttttg 3025910  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  3025909 ttgcatttttcgtccta 3025893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 558 - 672
Target Start/End: Complemental strand, 14432684 - 14432571
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||| |||| |||  ||||||||| | ||||||||    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattatta-tttttgtt 14432586  T
Q  658 gcatttttcgtccta 672  Q
    ||||||||| |||||    
T  14432585 gcatttttcatccta 14432571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 558 - 672
Target Start/End: Complemental strand, 15552596 - 15552484
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| || |  ||||||||||||||||||||| || ||| ||||||||||||||||||||||  |||||||||||||||| |||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcat-ttttgtt 15552499  T
Q  658 gcatttttcgtccta 672  Q
    | |||||||||||||    
T  15552498 gtatttttcgtccta 15552484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 558 - 670
Target Start/End: Original strand, 15551501 - 15551612
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| ||||||||||||||  ||||||||||| ||||| |||| |||||||||| |||||||  ||| |||| |||||| ||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatca-tttttgtt 15551599  T
Q  658 gcatttttcgtcc 670  Q
    |||||||||||||    
T  15551600 gcatttttcgtcc 15551612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 689 - 727
Target Start/End: Complemental strand, 28143446 - 28143408
Alignment:
Q  689 ctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  28143446 ctccagaaacgcagagaaatgacagttttagacctaccc 28143408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 609
Target Start/End: Complemental strand, 42192790 - 42192736
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcct 609  Q
    ||||||||||||||||||| ||||||  ||||| || |||||||||| |||||||    
T  42192790 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 42192736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 5e-61; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 555 - 727
Target Start/End: Complemental strand, 50970824 - 50970655
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 50970726  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  50970725 gttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 50970655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 556 - 727
Target Start/End: Original strand, 29306953 - 29307121
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatca-tttttg 29307051  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  29307052 ttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 29307121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 555 - 727
Target Start/End: Complemental strand, 5540364 - 5540195
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||| ||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcat-tttt 5540266  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  5540265 gttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 5540195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 555 - 727
Target Start/End: Complemental strand, 15646741 - 15646572
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||| ||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcat-tttt 15646643  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  15646642 gttgcatttttcgtccta--cccccaattttattctccaaaaacgcagagaaatgacagttttagacctaccc 15646572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 556 - 727
Target Start/End: Complemental strand, 8679086 - 8678919
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcat-ttttg 8678988  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||        ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  8678987 ttgcatttttcgtccta---cctccattttattctccaaaaatgcagagaaatgacagttttagacctaccc 8678919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 553 - 724
Target Start/End: Original strand, 18984116 - 18984284
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  18984116 ataggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttt 18984214  T
Q  653 ttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagaccta 724  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||| | |||||||||||||    
T  18984215 ttgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgatagttttagaccta 18984284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 555 - 727
Target Start/End: Original strand, 29869619 - 29869788
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | |||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatta-ttttt 29869717  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  29869718 gttgcatttttcgtccta--caccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 29869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 558 - 727
Target Start/End: Complemental strand, 33144462 - 33144296
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| ||||| ||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatca-tttttgtt 33144364  T
Q  658 gcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  33144363 gcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 33144296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 553 - 726
Target Start/End: Complemental strand, 26859607 - 26859438
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||||| ||    
T  26859607 ataggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcat-tt 26859509  T
Q  653 ttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
    ||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||    
T  26859508 ttgttgcatttttcgtcctacccccca---tttattctccaaaaacgcagagaaataatagttttagacctacc 26859438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 9018971 - 9019141
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  9018971 taggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatca-tttt 9019069  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| | | ||||||| ||||||    
T  9019070 tgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaattatatttttagatctaccc 9019141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 559 - 727
Target Start/End: Complemental strand, 5963120 - 5962955
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||| |||||||||||| ||||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcat-ttttgttg 5963022  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  5963021 catttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 5962955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 559 - 727
Target Start/End: Original strand, 15173099 - 15173264
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||  ||||||||||| |||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatca-tttttgttg 15173197  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  15173198 catttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 15173264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 556 - 727
Target Start/End: Complemental strand, 21856588 - 21856420
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||| ||||| ||||||    
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatca-tttttg 21856490  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
     ||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  21856489 ctgcatttttcgtccta--ctccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 21856420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 551 - 672
Target Start/End: Original strand, 8678536 - 8678656
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 650  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |    
T  8678536 taatatgcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatca-t 8678634  T
Q  651 ttttgttgcatttttcgtccta 672  Q
    ||||||||||||||||||||||    
T  8678635 ttttgttgcatttttcgtccta 8678656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 552 - 672
Target Start/End: Original strand, 50970274 - 50970393
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| ||    
T  50970274 aataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatca-tt 50970372  T
Q  652 tttgttgcatttttcgtccta 672  Q
    |||||||||||||||||||||    
T  50970373 tttgttgcatttttcgtccta 50970393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 556 - 727
Target Start/End: Complemental strand, 29307487 - 29307318
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttg 29307389  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||         ||| |  ||||| |||||||||||||| ||||||||||||||||||    
T  29307388 ttgcatttttcgtcctacctcctat-tttcaaactccagaaacgcagagaaatgacagttttagacctaccc 29307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 551 - 672
Target Start/End: Original strand, 5539811 - 5539931
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 650  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |    
T  5539811 taatatgcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-t 5539909  T
Q  651 ttttgttgcatttttcgtccta 672  Q
    |||||||| |||||||||||||    
T  5539910 ttttgttgtatttttcgtccta 5539931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 551 - 672
Target Start/End: Complemental strand, 17433765 - 17433645
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 650  Q
    |||||| |||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||     
T  17433765 taatagacttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat- 17433667  T
Q  651 ttttgttgcatttttcgtccta 672  Q
    ||||||||||||||||||||||    
T  17433666 ttttgttgcatttttcgtccta 17433645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 555 - 672
Target Start/End: Complemental strand, 18984665 - 18984549
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 18984567  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||||||||||    
T  18984566 gttgcatttttcgtccta 18984549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 29870164 - 29870049
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcat-ttttg 29870066  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  29870065 ttgcatttttcgtccta 29870049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 556 - 724
Target Start/End: Original strand, 17433216 - 17433381
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||||||  | |||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatca-tttttg 17433314  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagaccta 724  Q
    ||||||||||| |||||        |||||||||||||||||||||||||||| |||||||||||||||    
T  17433315 ttgcatttttcatccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 17433381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 9019510 - 9019393
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| |||    
T  9019510 taggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcat-ttt 9019412  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  9019411 tgttgcatttttcgtccta 9019393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 557 - 670
Target Start/End: Complemental strand, 4636515 - 4636403
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| ||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcat-ttttgt 4636417  T
Q  657 tgcatttttcgtcc 670  Q
    ||||||||||||||    
T  4636416 tgcatttttcgtcc 4636403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 555 - 672
Target Start/End: Complemental strand, 39154566 - 39154450
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||| ||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcat-tttt 39154468  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||||||||||    
T  39154467 gttgcatttttcgtccta 39154450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 552 - 672
Target Start/End: Complemental strand, 15173642 - 15173524
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| ||||||||||| ||    
T  15173642 aataggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctg-ccttttaaaacagaacaaaatggtccttcaattatca-tt 15173545  T
Q  652 tttgttgcatttttcgtccta 672  Q
    |||||||||||||||||||||    
T  15173544 tttgttgcatttttcgtccta 15173524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 556 - 672
Target Start/End: Original strand, 26859059 - 26859174
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatca-tttttg 26859157  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  26859158 ttgcatttttcgtccta 26859174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 564 - 672
Target Start/End: Original strand, 33143925 - 33144032
Alignment:
Q  564 tacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcattt 663  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt-ttgcatat 33144023  T
Q  664 ttcgtccta 672  Q
    |||||||||    
T  33144024 ttcgtccta 33144032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 554 - 672
Target Start/End: Original strand, 15646190 - 15646307
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||||||| ||||    
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatca-tttt 15646288  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  15646289 tgttgcatttttcgtccta 15646307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 558 - 672
Target Start/End: Original strand, 21856044 - 21856157
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  21856044 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgtt 21856142  T
Q  658 gcatttttcgtccta 672  Q
    ||||||||| |||||    
T  21856143 gcatttttcatccta 21856157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 553 - 722
Target Start/End: Original strand, 39154016 - 39154182
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    |||| |||||||||||||||| || || ||||||||| |||||||||||||| || |||||||||||||||||||||||||||| | ||||||||| |||    
T  39154016 atagacttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatca-ttt 39154114  T
Q  653 ttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacc 722  Q
    ||||||||||||||||||||        ||| ||||||||||||||||| |||||| |||||||||||||    
T  39154115 ttgttgcatttttcgtccta--ccccccattctattctccaaaaacgcatagaaatgacagttttagacc 39154182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 555 - 672
Target Start/End: Original strand, 52268289 - 52268405
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatca-ttttt 52268387  T
Q  655 gttgcatttttcgtccta 672  Q
    |||||| |||||||||||    
T  52268388 gttgcacttttcgtccta 52268405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 557 - 668
Target Start/End: Original strand, 5962579 - 5962689
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||||| ||||| |||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatca-tttttgt 5962677  T
Q  657 tgcatttttcgt 668  Q
    ||||||||||||    
T  5962678 tgcatttttcgt 5962689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 558 - 672
Target Start/End: Complemental strand, 52269291 - 52269178
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||| ||||||||||||| | |||||| ||||  ||| ||||||||||||||||||||||||  |||||||| ||||||| |||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcat-ttttgtt 52269193  T
Q  658 gcatttttcgtccta 672  Q
    ||| |||||||||||    
T  52269192 gcacttttcgtccta 52269178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 554 - 642
Target Start/End: Complemental strand, 2733504 - 2733416
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaa 642  Q
    |||||||||||| ||||||| |||| ||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| |||||    
T  2733504 taggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 564 - 653
Target Start/End: Complemental strand, 47827125 - 47827036
Alignment:
Q  564 tacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||  | ||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||| || |||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcattttt 47827036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 558 - 631
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 631  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 616 - 727
Target Start/End: Original strand, 4636033 - 4636140
Alignment:
Q  616 ttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagtt 715  Q
    ||||||||||||||| ||||| ||||| |||||||||| ||||||||||| || |||        |||||||||| ||||||||||||||||| ||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcattttt-gttgcattttttgttctacccccc--attttattcttcaaaaacgcagagaaatgacagtt 4636128  T
Q  716 ttagacctaccc 727  Q
    ||||||||||||    
T  4636129 ttagacctaccc 4636140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 556 - 672
Target Start/End: Original strand, 17112282 - 17112396
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| | ||| |||||||  ||||||| |||| ||||   |||||||||||| |||| ||||  ||| ||||||||||| |||||     
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatca-ttttta 17112379  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  17112380 ttgcatttttcgtccta 17112396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 617
Target Start/End: Complemental strand, 52235219 - 52235153
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgccctttt 617  Q
    |||||||||||||||||||||||||||||   ||||  || ||||||||||||| ||||||||||||    
T  52235219 taataggcttaattacacttttgatcctcagattttaaccaactcacgaaactgatcctgccctttt 52235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 556 - 636
Target Start/End: Complemental strand, 50419806 - 50419726
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 636  Q
    ||||||||| |||||||| || |||  ||| | || |||||||||| |||||||||| ||||||||  |||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtc 50419726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 609
Target Start/End: Complemental strand, 10279093 - 10279040
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcct 609  Q
    |||||||||||||||||||||||   |||||| || |||||||||| |||||||    
T  10279093 ggcttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcct 10279040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 8e-60; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 553 - 727
Target Start/End: Original strand, 18257134 - 18257305
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  18257134 ataggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttt 18257232  T
Q  653 ttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  18257233 ttgttgcatttttcgtcata--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 18257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 20741098 - 20741268
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatca-tttt 20741196  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  20741197 tgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 20741268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 555 - 727
Target Start/End: Complemental strand, 15828187 - 15828018
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||| |||||||||||| ||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcat-tttt 15828089  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  15828088 gttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 15828018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 556 - 727
Target Start/End: Complemental strand, 10900475 - 10900307
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttg 10900377  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  10900376 ttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 10900307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 28472635 - 28472804
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||| ||||    
T  28472635 taggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatca-tttt 28472733  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  28472734 tgttgcatttttcgtccta---cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 28472804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 29859824 - 29859993
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||| ||||    
T  29859824 taggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatca-tttt 29859922  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  29859923 tgttgcatttttcgtccta---cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 29859993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 556 - 727
Target Start/End: Complemental strand, 11277127 - 11276959
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcat-ttttg 11277029  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||        ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  11277028 ttgcatttttcgtccta--ccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccc 11276959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 554 - 672
Target Start/End: Original strand, 12935155 - 12935272
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  12935155 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttt 12935253  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  12935254 tgttgcatttttcgtccta 12935272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 553 - 727
Target Start/End: Complemental strand, 12935705 - 12935534
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||| |||||||||||| ||    
T  12935705 ataggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcat-tt 12935607  T
Q  653 ttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||| ||||||||||||||        ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  12935606 ttgttacatttttcgtccta--ccccccattttattctccataaacacagagaaatgacagttttagacctaccc 12935534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 557 - 727
Target Start/End: Complemental strand, 31470860 - 31470693
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttgt 31470762  T
Q  657 tgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||        |||||||||||||||||||||||||||| ||| ||||||| ||||||    
T  31470761 tgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccc 31470693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 554 - 719
Target Start/End: Original strand, 2319670 - 2319832
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  2319670 taggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-tttt 2319768  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttag 719  Q
    |||||||||||||||||||        ||||||||||||| |||||||||||||| | ||||||||    
T  2319769 tgttgcatttttcgtccta--ccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 11444985 - 11445155
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| |||| ||||||||||| ||||    
T  11444985 taggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatca-tttt 11445083  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        ||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  11445084 tgttgcatttttcgtccta--ccctccattttattctctaaaaacacagagaaatgacagttttagacctaccc 11445155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 11445534 - 11445417
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||    
T  11445534 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcat-ttt 11445436  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  11445435 tgttgcatttttcgtccta 11445417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 22219900 - 22219787
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  22219900 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 22219802  T
Q  654 tgttgcatttttcgt 668  Q
    |||||||||||||||    
T  22219801 tgttgcatttttcgt 22219787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 559 - 727
Target Start/End: Original strand, 10899942 - 10900108
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 10900040  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||         ||| |  ||||| |||||||||||||| ||||||||||||||||||    
T  10900041 catttttcgtcctacctcctat-tttcaaactccagaaacgcagagaaatgacagttttagacctaccc 10900108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 556 - 727
Target Start/End: Complemental strand, 1149977 - 1149808
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||||||||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattacca-tttttg 1149879  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctcc-aaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||        |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  1149878 ttgcatttttcgtccta--ccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccc 1149808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 553 - 668
Target Start/End: Complemental strand, 23075676 - 23075562
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||    
T  23075676 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat-tt 23075578  T
Q  653 ttgttgcatttttcgt 668  Q
    ||||||||||||||||    
T  23075577 ttgttgcatttttcgt 23075562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 555 - 672
Target Start/End: Original strand, 31470314 - 31470430
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| | |||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattatta-ttttt 31470412  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||||||||||    
T  31470413 gttgcatttttcgtccta 31470430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 555 - 726
Target Start/End: Original strand, 23073998 - 23074155
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||            
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat-------- 23074089  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
        ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  23074090 ----catttttcgtccta--ccccccattttattctccaaaaacgcagagaaataacagttttagacctacc 23074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 555 - 672
Target Start/End: Complemental strand, 20741650 - 20741531
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt--tt 652  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  653 ttgttgcatttttcgtccta 672  Q
    || |||||||||||||||||    
T  20741550 tttttgcatttttcgtccta 20741531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 559 - 672
Target Start/End: Original strand, 18504922 - 18505034
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| ||||||||     
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatca-tttttgttt 18505020  T
Q  659 catttttcgtccta 672  Q
    ||||||||||||||    
T  18505021 catttttcgtccta 18505034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 18257682 - 18257567
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatta-tttttg 18257584  T
Q  656 ttgcatttttcgtccta 672  Q
    || ||||||||||||||    
T  18257583 ttacatttttcgtccta 18257567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 557 - 718
Target Start/End: Complemental strand, 18505463 - 18505305
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||| |||||||||||| ||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcat-ttttgt 18505365  T
Q  657 tgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagtttta 718  Q
    ||||||||||||||||        |||||||||||||| |||| |||||||| |||||||||    
T  18505364 tgcatttttcgtccta--ccccccattttattctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 553 - 644
Target Start/End: Original strand, 1149462 - 1149553
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatt 644  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  1149462 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 559 - 723
Target Start/End: Complemental strand, 2322760 - 2322600
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| || ||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcat-ttttgttg 2322662  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacct 723  Q
    ||||||||||||||        |||||||||||| ||||| ||||||||| ||||||||||||||    
T  2322661 catttttcgtccta--cccctcattttattctcc-aaaacacagagaaatgacagttttagacct 2322600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 556 - 722
Target Start/End: Original strand, 4811372 - 4811535
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||  || |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||| ||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatca-tttttg 4811470  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacc 722  Q
    || ||||||||||| ||        |||||||||| |||||||||||| ||||||||||||||||||    
T  4811471 tttcatttttcgtctta--ccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 556 - 666
Target Start/End: Complemental strand, 4811801 - 4811692
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||| || |||  ||||||||||||||||||||||| |||||||||||| |||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcat-ttttg 4811703  T
Q  656 ttgcatttttc 666  Q
    |||||||||||    
T  4811702 ttgcatttttc 4811692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 557 - 672
Target Start/End: Original strand, 15827639 - 15827755
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa--acggtcattcaattatcatttttt 654  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||  |||||| ||||| ||||| |||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatca-ttttt 15827737  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||||||||||    
T  15827738 gttgcatttttcgtccta 15827755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 558 - 653
Target Start/End: Original strand, 29033436 - 29033531
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcattttt 29033531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 555 - 727
Target Start/End: Original strand, 11276589 - 11276759
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    |||||||||||||| |||  ||| |||||||||| ||||||| ||||||| |||| ||||||||||||||||||||| |||| ||||||| ||| |||||    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtca-ttttt 11276687  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||| ||||||||||||||         ||| |  |||||||||||||||||||| |||||||||| |||||||    
T  11276688 gtttcatttttcgtcctacctcctat-tttcaaactccaaaaacgcagagaaatgacagttttaggcctaccc 11276759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 558 - 670
Target Start/End: Complemental strand, 29035180 - 29035069
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    |||||||||||||||  |||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  ||| || | ||||||| |||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcat-ttttgtt 29035082  T
Q  658 gcatttttcgtcc 670  Q
    |||||||||||||    
T  29035081 gcatttttcgtcc 29035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 559 - 672
Target Start/End: Complemental strand, 3835268 - 3835156
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| |||  |||||||| ||||||||||||| ||||||||||  |||||||||||||||||  ||| || ||||||||| |||||| |    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcat-ttttgtgg 3835170  T
Q  659 catttttcgtccta 672  Q
    ||||||||||||||    
T  3835169 catttttcgtccta 3835156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 554 - 672
Target Start/End: Original strand, 18296143 - 18296260
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||| | ||||  ||||||||||||| | ||||||| ||| || |  |||||||||||||||||||||||| ||| |||| |||||| ||||    
T  18296143 taggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatca-tttt 18296241  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  18296242 tgttgcatttttcgtccta 18296260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcc 612  Q
    |||||||||||||||||| ||||||| ||||| || |||||||||| ||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 1e-58; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 551 - 727
Target Start/End: Complemental strand, 31779202 - 31779029
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 650  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  31779202 taataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat- 31779104  T
Q  651 ttttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||| |        ||||||||||||||||||||||||||||  ||||||||||| |||||    
T  31779103 ttttgttgcatttttcgtccca--ccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccc 31779029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 556 - 727
Target Start/End: Complemental strand, 39556122 - 39555954
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||| |    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatca-ttttcg 39556024  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  39556023 ttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 39555954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 551 - 727
Target Start/End: Original strand, 5136975 - 5137148
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 650  Q
    ||||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| |    
T  5136975 taataggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-t 5137073  T
Q  651 ttttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  5137074 ttttgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 5137148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 556 - 724
Target Start/End: Complemental strand, 32535508 - 32535339
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat----tt 651  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    ||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  652 tttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagaccta 724  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||| | |||||||||||||    
T  32535408 tttgttgcatttttcgtccta---cccccattttattctccaaaaacgcagagaaatgatagttttagaccta 32535339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 20840558 - 20840728
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||    
T  20840558 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatca-tttt 20840656  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        ||||||||||||  |||||||||||||| ||||||||||||||||||    
T  20840657 tgttgcatttttcgtccta--ccccccattttattctccttaaacgcagagaaatgacagttttagacctaccc 20840728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 555 - 727
Target Start/End: Original strand, 23644461 - 23644630
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| ||||||||||| |||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatca-ttttt 23644559  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||||||||||||    
T  23644560 gttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaataatagttttagacctaccc 23644630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 551 - 727
Target Start/End: Complemental strand, 25853777 - 25853604
Alignment:
Q  551 taataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatt 650  Q
    |||||| ||||||||||||||||||||||||||||||  |||||||||||||||||| || | |||||||||||||||||| |||| ||||||||||||     
T  25853777 taatagacttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcat- 25853679  T
Q  651 ttttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  25853678 ttttgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaataacagttttagacctaccc 25853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 559 - 727
Target Start/End: Original strand, 41046703 - 41046868
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 41046801  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  41046802 catttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 41046868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 24301103 - 24300933
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||| ||| | ||||| ||||    
T  24301103 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatca-tttt 24301005  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  24301004 tgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 24300933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 555 - 727
Target Start/End: Complemental strand, 27394123 - 27393954
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||| || |||||||||||| ||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcat-tttt 27394025  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||| | |||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  27394024 gttgcattttccatccta--cccccaattttattctccaaaaacgcagagaaataacagttttagacctaccc 27393954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 555 - 727
Target Start/End: Original strand, 37726928 - 37727097
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||| || || ||||||||||| |||||||||||||||| |||||||||||| ||||||||||| |||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatca-ttttt 37727026  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  37727027 gttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 37727097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 556 - 727
Target Start/End: Original strand, 43973441 - 43973609
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||| || |  |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatca-tttttg 43973539  T
Q  656 ttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||        ||||||||||||||||||||||| |||||||||||||||||||||||    
T  43973540 ttgcatttttcgtccta--ccccccattttattctccaaaaacgcagataaataacagttttagacctaccc 43973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 43973987 - 43973870
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  43973987 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcat-ttt 43973889  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  43973888 tgttgcatttttcgtccta 43973870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 554 - 670
Target Start/End: Complemental strand, 29801963 - 29801848
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  29801963 taggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat-ttt 29801865  T
Q  654 tgttgcatttttcgtcc 670  Q
    |||||||||||||||||    
T  29801864 tgttgcatttttcgtcc 29801848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 554 - 714
Target Start/End: Original strand, 48452987 - 48453144
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  48452987 taggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatca-tttt 48453085  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagt 714  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| |||||    
T  48453086 tgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 554 - 727
Target Start/End: Original strand, 30104480 - 30104649
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| || | ||||||| ||||||||||| ||||    
T  30104480 taggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatca-tttt 30104578  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||| || |||||||||||||||| ||||||||||||||||||    
T  30104579 tgttgcatttttcgtccta---cccccattttattatctaaaaacgcagagaaatgacagttttagacctaccc 30104649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 555 - 672
Target Start/End: Complemental strand, 20841107 - 20840991
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcat-tttt 20841009  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||||||||||    
T  20841008 gttgcatttttcgtccta 20840991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 26837902 - 26837733
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||| ||||| ||||    
T  26837902 taggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccc-tttaaaatagaacaaaacggtcattcaagtatca-tttt 26837805  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||| ||||||        ||||||||||||||||| |||||||||| |||||||||||| |||||    
T  26837804 tgttgcattttttgtccta--ccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccc 26837733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 37727475 - 37727360
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcat-ttttg 37727377  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  37727376 ttgcatttttcgtccta 37727360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 553 - 672
Target Start/End: Complemental strand, 4275912 - 4275794
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||| ||    
T  4275912 ataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcat-tt 4275814  T
Q  653 ttgttgcatttttcgtccta 672  Q
    ||||||||||||||||||||    
T  4275813 ttgttgcatttttcgtccta 4275794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 554 - 672
Target Start/End: Original strand, 17464489 - 17464606
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  17464489 taggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-tttt 17464587  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  17464588 tgttgcatttttcgtccta 17464606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 555 - 672
Target Start/End: Original strand, 27393660 - 27393776
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatca-ttttt 27393758  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||||||||||    
T  27393759 gttgcatttttcgtccta 27393776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 555 - 668
Target Start/End: Original strand, 39555577 - 39555689
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatca-ttttt 39555675  T
Q  655 gttgcatttttcgt 668  Q
    ||||||||||||||    
T  39555676 gttgcatttttcgt 39555689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 23645010 - 23644895
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcat-ttttg 23644912  T
Q  656 ttgcatttttcgtccta 672  Q
    ||||||||||| |||||    
T  23644911 ttgcatttttcatccta 23644895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 560 - 727
Target Start/End: Complemental strand, 22425354 - 22425190
Alignment:
Q  560 taattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgc 659  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||||||||  |||||||||||| |||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcat-ttttgttgc 22425256  T
Q  660 atttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||        |||||||||||||||||||||||||||| | | ||||||| ||||||    
T  22425255 atttttcgtccta--ccccccattttattctccaaaaacgcagagaaattagatttttagatctaccc 22425190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 555 - 672
Target Start/End: Complemental strand, 30098309 - 30098193
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| ||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcat-tttt 30098211  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||||||||||    
T  30098210 gttgcatttttcgtccta 30098193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 555 - 672
Target Start/End: Original strand, 31778652 - 31778768
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||  |||||| |||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatca-ttttt 31778750  T
Q  655 gttgcatttttcgtccta 672  Q
    ||||||||||||||||||    
T  31778751 gttgcatttttcgtccta 31778768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 559 - 672
Target Start/End: Original strand, 32534962 - 32535074
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 32535060  T
Q  659 catttttcgtccta 672  Q
    ||||||||||||||    
T  32535061 catttttcgtccta 32535074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 556 - 668
Target Start/End: Original strand, 25853234 - 25853345
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatca-tttttg 25853332  T
Q  656 ttgcatttttcgt 668  Q
    |||||||||||||    
T  25853333 ttgcatttttcgt 25853345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 5137528 - 5137411
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| |||| |||||||||||| |||    
T  5137528 taggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcat-ttt 5137430  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||| ||||||    
T  5137429 tgttgcatttttagtccta 5137411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 559 - 669
Target Start/End: Original strand, 26274570 - 26274679
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||| |||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 26274668  T
Q  659 catttttcgtc 669  Q
    |||||||||||    
T  26274669 catttttcgtc 26274679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 556 - 669
Target Start/End: Original strand, 29801356 - 29801468
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| || |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatca-tttttg 29801454  T
Q  656 ttgcatttttcgtc 669  Q
    ||||||||||||||    
T  29801455 ttgcatttttcgtc 29801468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 554 - 672
Target Start/End: Original strand, 22424812 - 22424929
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| | |||||||||  ||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  22424812 taggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatca-tttt 22424910  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  22424911 tgttgcatttttcgtccta 22424929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 555 - 724
Target Start/End: Complemental strand, 17465038 - 17464871
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||| ||||| ||||||||||||||||||| || ||||||||||   ||||||||||| |||||||||||||| |||||||||||| ||||    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcat-tttt 17464940  T
Q  655 gttgca-tttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagaccta 724  Q
    |||||| ||||| ||||||        ||||||||||||||||| |||||||||| |||||||||||||||    
T  17464939 gttgcatttttttgtccta--ccccccattttattctccaaaaatgcagagaaatgacagttttagaccta 17464871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 559 - 672
Target Start/End: Complemental strand, 25612519 - 25612407
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||| || ||||||||| ||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcat-ttttgttg 25612421  T
Q  659 catttttcgtccta 672  Q
    ||||||||||||||    
T  25612420 catttttcgtccta 25612407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 26275113 - 26274944
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||| ||||||| | |||||  ||| |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||  ||||||||||| |||    
T  26275113 taggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcat-ttt 26275015  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||| ||||||||||||        |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  26275014 tgttgc-tttttcgtccta--ccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccc 26274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 50116954 - 50116839
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| ||||| ||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcat-ttttg 50116856  T
Q  656 ttgcatttttcgtccta 672  Q
    ||||| |||||||||||    
T  50116855 ttgcaattttcgtccta 50116839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 552 - 672
Target Start/End: Original strand, 26837356 - 26837475
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 651  Q
    |||||| ||||||||| ||||| |||| || ||||||||||||||||||| |||||||||||||||| |||| ||| |||||||| ||||||||||| ||    
T  26837356 aataggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatca-tt 26837454  T
Q  652 tttgttgcatttttcgtccta 672  Q
    |||||||||||||||||||||    
T  26837455 tttgttgcatttttcgtccta 26837475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 23228552 - 23228438
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||  ||| ||||||||||| |||||     
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatca-ttttta 23228455  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  23228454 ttgcatttttcgtccta 23228438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 557 - 671
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||  ||| |||  |||||| |||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatca-tttttgt 51473527  T
Q  657 tgcatttttcgtcct 671  Q
    |||| |||| |||||    
T  51473528 tgcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 51474881 - 51474764
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| | | ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||  ||| || | ||||||| |||    
T  51474881 taggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcat-ttt 51474783  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  51474782 tgttgcatttttcgtccta 51474764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 559 - 672
Target Start/End: Complemental strand, 41047239 - 41047129
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||| | || || |||||||||||||||||||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||| |||||||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaac-gtccttcaattatca-tttttgttg 41047143  T
Q  659 catttttcgtccta 672  Q
    ||||||||||||||    
T  41047142 catttttcgtccta 41047129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 559 - 670
Target Start/End: Original strand, 24300560 - 24300669
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||| ||||| || |||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||  ||||||||||| |||||||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatca-tttttgttg 24300657  T
Q  659 catttttcgtcc 670  Q
    || |||||||||    
T  24300658 caattttcgtcc 24300669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 557 - 672
Target Start/End: Complemental strand, 32697244 - 32697130
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||| | ||||| |||||||||||| |||||||||||||| | |||  ||||||||||||||||||||||  ||  |||||||||||| ||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcat-ttttgt 32697146  T
Q  657 tgcatttttcgtccta 672  Q
    ||||||||||||||||    
T  32697145 tgcatttttcgtccta 32697130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 553 - 632
Target Start/End: Complemental strand, 37222119 - 37222040
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaac 632  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||    
T  37222119 ataggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaac 37222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 572 - 671
Target Start/End: Complemental strand, 18010274 - 18010176
Alignment:
Q  572 tgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgtcct 671  Q
    |||||||| |||||| | |||||||||||| |||| | ||||||||||||||||||||||  || ||||||||||||| |||||||||||||||||||||    
T  18010274 tgatcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcat-ttttgttgcatttttcgtcct 18010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 553 - 668
Target Start/End: Original strand, 45965935 - 45966049
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||  |  |||||| ||||||||||| |||||||  ||| ||| ||||||| |||    
T  45965935 ataggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatca-ttt 45966033  T
Q  653 ttgttgcatttttcgt 668  Q
     |||||||||||||||    
T  45966034 gtgttgcatttttcgt 45966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 557 - 671
Target Start/End: Original strand, 25419145 - 25419260
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggt-cattcaattatcattttttg 655  Q
    |||| |||| ||||||| || ||||||||| || ||||||||||| | || ||||||||||||||||||||||||| || | |||||||||||||||||     
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttttt 25419244  T
Q  656 ttgcatttttcgtcct 671  Q
    ||||| |||| |||||    
T  25419245 ttgcagttttagtcct 25419260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 669
Target Start/End: Complemental strand, 25420684 - 25420574
Alignment:
Q  558 cttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgtt 657  Q
    ||||||||||||||||||| |||| ||||| ||||||||||||| || ||  |||||||||||| |||| ||||  ||| ||||||||| | ||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattatta-tttttgtt 25420586  T
Q  658 gcatttttcgtc 669  Q
    ||||||||||||    
T  25420585 gcatttttcgtc 25420574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 553 - 672
Target Start/End: Original strand, 37220554 - 37220672
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| | |  | || ||| |||||||||||||| ||||  ||| |||| |||||| |||    
T  37220554 ataggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatca-ttt 37220652  T
Q  653 ttgttgcatttttcgtccta 672  Q
    |||||||| |||||||||||    
T  37220653 ttgttgcacttttcgtccta 37220672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 587
Target Start/End: Original strand, 25611497 - 25611529
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttg 587  Q
    |||||||||||||||||||||||||||||||||    
T  25611497 aggcttaattacacttttgatcctcgtgttttg 25611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 607
Target Start/End: Original strand, 40838648 - 40838703
Alignment:
Q  552 aataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtc 607  Q
    |||||| ||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  40838648 aataggtttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtc 40838703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 609
Target Start/End: Original strand, 49720369 - 49720424
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcct 609  Q
    ||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  49720369 taggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcct 49720424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 609
Target Start/End: Complemental strand, 52375879 - 52375824
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcct 609  Q
    |||||||||||||||||||| ||||||  ||||| || |||||||||| |||||||    
T  52375879 taggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 52375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 554 - 632
Target Start/End: Original strand, 49407794 - 49407872
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaac 632  Q
    |||||||||||||||||||| ||||||  ||||| ||  ||||||||| ||||| ||||  ||| ||| ||||||||||    
T  49407794 taggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaac 49407872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 689 - 727
Target Start/End: Original strand, 49407925 - 49407963
Alignment:
Q  689 ctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  49407925 ctccaaaaacgcagagaaatgacaattttagacctaccc 49407963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 689 - 727
Target Start/End: Original strand, 55192247 - 55192285
Alignment:
Q  689 ctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  55192247 ctccagaaacgcagagaaatgacagttttagacctaccc 55192285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 726
Target Start/End: Original strand, 29801538 - 29801583
Alignment:
Q  681 attttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
    |||||||||| |||||| |||||||||| |||||||||||| ||||    
T  29801538 attttattcttcaaaaatgcagagaaatgacagttttagacatacc 29801583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 114; Significance: 2e-57; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 553 - 727
Target Start/End: Original strand, 1664 - 1835
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||| |||    
T  1664 ataggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatca-ttt 1762  T
Q  653 ttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  1763 ttgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 1835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 554 - 672
Target Start/End: Complemental strand, 2214 - 2097
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2214 taggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat-ttt 2116  T
Q  654 tgttgcatttttcgtccta 672  Q
    |||||||||||||||||||    
T  2115 tgttgcatttttcgtccta 2097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 111; Significance: 1e-55; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 553 - 727
Target Start/End: Original strand, 750 - 920
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 652  Q
    |||| |||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  ||    
T  750 atagacttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca--tt 847  T
Q  653 ttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||    
T  848 ttgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaataacagttttagacataccc 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 1286 - 1171
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttg 1188  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||| ||||||||||    
T  1187 ttgcatctttcgtccta 1171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 109; Significance: 2e-54; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 4754 - 4584
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcat-ttt 4656  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  4655 tgttgcatttttcgtccta--ccccccattttattctccaaaaacacagagaaatgacagttttagacctaccc 4584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 595 - 668
Target Start/End: Original strand, 4242 - 4314
Alignment:
Q  595 cacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgt 668  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatca-tttttgttgcatttttcgt 4314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 105; Significance: 5e-52; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 134220 - 134050
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| || |||||||| || ||||    
T  134220 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaaca-tttt 134122  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  134121 tgttgcatttttcgtccta--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 134050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 104; Significance: 2e-51; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 555 - 727
Target Start/End: Original strand, 64301 - 64470
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatca-ttttt 64399  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  64400 gttgcatttttcgtcata--ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 64470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 559 - 672
Target Start/End: Complemental strand, 64847 - 64735
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcat-ttttgttg 64749  T
Q  659 catttttcgtccta 672  Q
    ||||||||||||||    
T  64748 catttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 689 - 727
Target Start/End: Complemental strand, 205784 - 205746
Alignment:
Q  689 ctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  205784 ctccaaaaacgcagagaaatggcagttttagacctaccc 205746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 95; Significance: 4e-46; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 555 - 726
Target Start/End: Original strand, 18834 - 19001
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    |||||| |||||||||||| ||||  ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||||| |||||    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatca-ttttt 18932  T
Q  655 gttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctacc 726  Q
    |||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||| ||||    
T  18933 gttgcatttttcatccta---cccccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 556 - 655
Target Start/End: Complemental strand, 19166 - 19067
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttg 19067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 554 - 727
Target Start/End: Complemental strand, 42705 - 42536
Alignment:
Q  554 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    |||||||||||| |||||||  ||||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||| |||| ||||||| |||    
T  42705 taggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcat-ttt 42607  T
Q  654 tgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    |||| ||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||    
T  42606 tgtttcatttttcgtccta---cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccc 42536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 559 - 665
Target Start/End: Original strand, 42172 - 42277
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||  | |||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatca-tttttgttg 42270  T
Q  659 cattttt 665  Q
    |||||||    
T  42271 cattttt 42277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 93; Significance: 7e-45; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 556 - 672
Target Start/End: Complemental strand, 11168 - 11053
Alignment:
Q  556 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttg 655  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcat-ttttg 11070  T
Q  656 ttgcatttttcgtccta 672  Q
    |||||||||||||||||    
T  11069 ttgcatttttcgtccta 11053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 575 - 727
Target Start/End: Original strand, 10640 - 10789
Alignment:
Q  575 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgtcctann 674  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||||||||      
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatca-ttttcgttgcatttttcgtccta-- 10736  T
Q  675 nnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
          ||||||||||||||||| |||||||||| |||||||||||| |||||    
T  10737 ccctccattttattctccaaaaatgcagagaaatgacagttttagacgtaccc 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 92; Significance: 3e-44; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 559 - 727
Target Start/End: Complemental strand, 10414 - 10250
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||  | |||||||||||||||||||||||||| |||||||||||| ||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcat-ttttgttg 10316  T
Q  659 catttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacctaccc 727  Q
    ||||||||||||||        |||||||||||||||||  ||||||||| ||||||||| ||||||||    
T  10315 catttttcgtccta---cccccattttattctccaaaaattcagagaaatgacagttttaaacctaccc 10250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 559 - 653
Target Start/End: Original strand, 9935 - 10029
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    ||||||||| ||||| |||||||||||| ||||| ||||||||||| || ||||||||||| | ||||||||| |||| ||||||||||| ||||    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaatttt 10029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 555 - 671
Target Start/End: Complemental strand, 28789 - 28674
Alignment:
Q  555 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttt 654  Q
    |||| |||||||||||||| || ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcat-tttt 28691  T
Q  655 gttgcatttttcgtcct 671  Q
    |||||| ||||||||||    
T  28690 gttgcagttttcgtcct 28674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 557 - 669
Target Start/End: Original strand, 568 - 679
Alignment:
Q  557 gcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgt 656  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||| ||||||||||| |||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatca-tttttgt 666  T
Q  657 tgcatttttcgtc 669  Q
    || ||||||||||    
T  667 tgtatttttcgtc 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 66; Significance: 9e-29; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 559 - 672
Target Start/End: Complemental strand, 62000 - 61888
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttg 658  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||||   |||||||| ||||| ||||||||     
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatca-tttttgtta 61902  T
Q  659 catttttcgtccta 672  Q
     |||||||||||||    
T  61901 tatttttcgtccta 61888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 553 - 630
Target Start/End: Original strand, 61025 - 61102
Alignment:
Q  553 ataggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa 630  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| ||||||||    
T  61025 ataggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 559 - 653
Target Start/End: Complemental strand, 8551 - 8457
Alignment:
Q  559 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 653  Q
    ||||||||||||||| || || |||||||| ||||| |||||||||||||| ||||||||||||| | |||||||||| ||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcattttt 8457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 575 - 672
Target Start/End: Complemental strand, 17022 - 16926
Alignment:
Q  575 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgtccta 672  Q
    ||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||| |||||||||||| ||||||||||||||||||||||    
T  17022 tcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcat-ttttgttgcatttttcgtccta 16926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 624 - 727
Target Start/End: Original strand, 16564 - 16664
Alignment:
Q  624 gaacaaaacggtcattcaattatcattttttgttgcatttttcgtcctannnnnnnnattttattctccaaaaacgcagagaaataacagttttagacct 723  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcattttt-gttgcatttttcgtcatacccccc--attttattctccaaaaacgcagagaaatgacagttttagacct 16660  T
Q  724 accc 727  Q
    ||||    
T  16661 accc 16664  T

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Target: scaffold1696 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 672
Target Start/End: Original strand, 454 - 564
Alignment:
Q  560 taattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgc 659  Q
    |||||||| ||||| || |||||||||||||||||||||||| ||||| ||  ||||||||||| |||| ||  ||| ||||||||||| ||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatca-tttttgttgc 551  T
Q  660 atttttcgtccta 672  Q
    |||||||||||||    
T  552 atttttcgtccta 564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 672
Target Start/End: Complemental strand, 7784 - 7718
Alignment:
Q  605 gtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttttgttgcatttttcgtccta 672  Q
    ||||| |||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcat-ttttgttgcatttttcgtccta 7718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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