View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3048R-Insertion-21 (Length: 985)
Name: NF3048R-Insertion-21
Description: NF3048R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3048R-Insertion-21 |
 | |
|
| [»] scaffold0922 (1 HSPs) |
| | |
|
| [»] scaffold0257 (2 HSPs) |
| | |
|
| [»] scaffold1142 (1 HSPs) |
| | |
|
| [»] scaffold1147 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 777; Significance: 0; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 777; E-Value: 0
Query Start/End: Original strand, 9 - 975
Target Start/End: Original strand, 8020758 - 8021727
Alignment:
| Q |
9 |
accacaatattgacaggttagcgaaataagtgttgaagaaggtgacaaccaaagagcaatagcttctacttcaatcgccataacaaagcctctaaccact |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8020758 |
accacaatattgacaggttagcgaaataagtgttgaagaaggtgacaaccaaagagctatagcttctacttcaatcgccataacaaagcctctaaccact |
8020857 |
T |
|
| Q |
109 |
caagatgttgatgttgaaatctggcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggttttcttttcttaagttacctcatc |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
8020858 |
caagatgttgatgttgaaatctggcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggttttcttttcttaagttatctcatc |
8020957 |
T |
|
| Q |
209 |
gcccttttcattttgaagttaaccttcttctttctcaccttttctcagtttctctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaaca |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8020958 |
gcccttttcattttgaagttaaccttcttctttcccaccttttctcagtttctctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaaca |
8021057 |
T |
|
| Q |
309 |
gtttcccaaggaagatgaaatattagtttccaaatcaagaccctcttctattgaatctcagtgtccttcaaagtctactcaaggtattttattgcatcan |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8021058 |
gtttcccaaggaagatgaaatattagtttccaaatcaagaccctcttctattgaatctcagtgtccttcaaagtctactcaaggtattttattgcatcat |
8021157 |
T |
|
| Q |
409 |
nnnnnnnaaattaattttctagtgctcaaatatgcataaacattatttcatgtactctcatctcaggggaaccttctcaaagagatgaagatttaagttc |
508 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
8021158 |
ttttttaaaattaattttctagtgctcaaatatgcataaacattatttcatgtactctc-----aggggaaccttctcaaagagatgaagatttaagttc |
8021252 |
T |
|
| Q |
509 |
ttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatcct |
608 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8021253 |
ttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgagaaattgtctctgttgactgatttccttgttaagcatcct |
8021352 |
T |
|
| Q |
609 |
tcatttcttctaaggcacacttcattgagtagccgatacaagggt---tcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagt |
705 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8021353 |
tcatttcttctaaggcacacttcattgagtagccgatacaagggttggttatgcctacaactgtctagccgagctattgaaattccttcaaactcatagt |
8021452 |
T |
|
| Q |
706 |
gtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaa |
805 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8021453 |
gtgttggatgtgttaggttcaagcctctctgaatttatcgagttattacaagatgtacacagttttccttttgataaggaatggttggatgatatcgaaa |
8021552 |
T |
|
| Q |
806 |
agcttgctttgtttcatgggttcgcaagtctctcaagatgcatttgcaaaaattgttggactcaaaacacat-ttgacac-acgtggtgaagtatcttaa |
903 |
Q |
| |
|
||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| |
|
|
| T |
8021553 |
agcgtgctttgtttcat-ggttcgcaagtctctcaagatgca-ttgcaaaaattgttggactcaaaacacatcttgacacaacgtgtggaagtatcttaa |
8021650 |
T |
|
| Q |
904 |
gcatc-agtggcttcttctg-agctga-ttgcaggagcatcactcacca-gagttacaa--tttacgaacacgggatg |
975 |
Q |
| |
|
||||| | ||||||| |||| |||||| ||||| |||||||||||| || ||| |||| ||||||||||||||||| |
|
|
| T |
8021651 |
gcatcaattggcttcctctgaagctgatttgca-gagcatcactcaacaggaggcacaaattttacgaacacgggatg |
8021727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 567 - 740
Target Start/End: Original strand, 22965811 - 22965983
Alignment:
| Q |
567 |
gagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaac |
666 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||| |||| ||| ||||| ||||| |||||||| |||||| |||||||| ||| |||| |||| |
|
|
| T |
22965811 |
gagaacttgtctttgttgactgatttctttgttaagtatccatcagttcttttaagggacacttcactgagtactagatacaagtgtt-atgcatacact |
22965909 |
T |
|
| Q |
667 |
tgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatt |
740 |
Q |
| |
|
|||||||| |||||||| ||||||| ||||| ||||||||| | |||||||||| |||||| || |||||||| |
|
|
| T |
22965910 |
tgtctagctgagctattacaattcctccaaacccatagtgtgctagatgtgttagcttcaagtcattctgaatt |
22965983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 503 - 740
Target Start/End: Original strand, 22792281 - 22792510
Alignment:
| Q |
503 |
aagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaag |
602 |
Q |
| |
|
||||||| |||| ||||||| | ||||||||||| | || || ||| ||||| |||| | | ||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
22792281 |
aagttctccttgtattgtcaaatgggagcttgagcaactggtctccgagaattatttggattacgagaacttgtctttgttgactgatttctttgttaag |
22792380 |
T |
|
| Q |
603 |
catccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcat |
702 |
Q |
| |
|
|||| ||| ||||| ||||| |||||||| |||||| ||||| || ||| |||| | | ||| || |||||||| ||||||| ||||| ||| |
|
|
| T |
22792381 |
tatccatcagttcttttaagggacacttcactgagtactagatac-agtgtt-atgcat---agtgt---gctgagctattacaattcctccaaacccat |
22792472 |
T |
|
| Q |
703 |
agtgtgttggatgtgttaggttcaagccactctgaatt |
740 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
22792473 |
agtgtgctggatgtgttaggttcaagtcactctgaatt |
22792510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 619 - 740
Target Start/End: Original strand, 22400686 - 22400806
Alignment:
| Q |
619 |
taaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgt |
718 |
Q |
| |
|
||||| |||||||| |||||| |||||||| ||| |||| |||| |||||||| || ||||| ||||||| ||||| ||||||||| | ||||||| |
|
|
| T |
22400686 |
taagggacacttcactgagtactagatacaagtgtt-atgcatacacttgtctagctgatctattacaattcctccaaacccatagtgtgctagatgtgt |
22400784 |
T |
|
| Q |
719 |
taggttcaagccactctgaatt |
740 |
Q |
| |
|
|||||||||| ||||||||||| |
|
|
| T |
22400785 |
taggttcaagtcactctgaatt |
22400806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 22791940 - 22792020
Alignment:
| Q |
189 |
ttttcttaagttacctcatcgcccttttcattttgaagttaacct-tcttctttctcaccttttctcagtttctctaaatga |
269 |
Q |
| |
|
|||||||| |||||||||| ||||||| ||||||||||||| || |||||| |||| || || ||||||||||||||||| |
|
|
| T |
22791940 |
ttttcttatgttacctcataacccttttgattttgaagttaaactctcttctctctccactatt-tcagtttctctaaatga |
22792020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 404; Significance: 0; HSPs: 47)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 43 - 820
Target Start/End: Original strand, 28151610 - 28152383
Alignment:
| Q |
43 |
gaagaaggtgacaaccaaagagcaatagcttctacttcaatcgccataacaaagcctctaaccactcaagatgttgatgttgaaatctggcaggaaacta |
142 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28151610 |
gaagaaggtgacaaccaaagagcaatagcttatactccaattgacataacaaagcctgtaaccactcaagatgttgatgttgaaatctggcaggaaacta |
28151709 |
T |
|
| Q |
143 |
gtaacactaatgacgatcgaggtgaagaatctttggatcggttttcttttcttaagttacctcatcgcccttttcattttgaagttaacct-tcttcttt |
241 |
Q |
| |
|
||||||||||||| |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| | || |||| ||| |
|
|
| T |
28151710 |
gtaacactaatgatgatcaaggtgaagaatctttggatcgcttttattttcttaagttacctcatcgccctttttattttgaagtttagctctcttgttt |
28151809 |
T |
|
| Q |
242 |
ctcaccttttctcagtttctctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaacagtttcccaaggaagatgaaatattagtttccaa |
341 |
Q |
| |
|
| || ||||| |||||||||||||||||||| |||||||||||| ||| ||||||| |||| | |||||| | ||||| ||| | |||||||||||||| |
|
|
| T |
28151810 |
cccatcttttgtcagtttctctaaatgatgataatgtcatgaaagcaagctcaaatactgaggatcagttttcaaaggatgataacatattagtttccaa |
28151909 |
T |
|
| Q |
342 |
atcaagaccctcttctattgaatctcagtgtccttcaaagtctactcaaggtattttattgcatcannnnnnnna-aattaattttctagtgctcaaata |
440 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||| || || ||||||||||||| | | ||||||||| || ||||| ||||| |
|
|
| T |
28151910 |
atcaagaccctcttctattgcatctcagtttccttcaaagccttctgaaggtattttatttctttgttttatttttaattaatttacttgtgcttaaata |
28152009 |
T |
|
| Q |
441 |
tgcataaacattatttcatgtactctcatctcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatc |
540 |
Q |
| |
|
||||||| ||| |||| | |||| ||| ||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
28152010 |
tgcataattattctttcctatactttca-----ggggacccttctcaaatagatgaagatttaagttcttcttttgttgtcaccggggagcttgagaatc |
28152104 |
T |
|
| Q |
541 |
tagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtag |
640 |
Q |
| |
|
|||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
28152105 |
tagtctccaataatcatttggctattgagaaattgtctttgttgactgacttccttgttaagcatccttcagttcttctaagggacacttcattgagtag |
28152204 |
T |
|
| Q |
641 |
ccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatt |
740 |
Q |
| |
|
| |||||||||||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
28152205 |
cagatacaagggtt-atgcctacaacagcctagcagagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagcaactctgaatt |
28152303 |
T |
|
| Q |
741 |
tatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttc |
820 |
Q |
| |
|
| | ||||||||||||||||| || || ||||| ||||||||||| |||||||||||| | |||| || |||||||||| |
|
|
| T |
28152304 |
tgttgagttattacaagatgtgcgtagatttccgtttgataaggagtggttggatgatgttgaaatgcgcgctttgtttc |
28152383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 104 - 879
Target Start/End: Complemental strand, 17744615 - 17743850
Alignment:
| Q |
104 |
ccactcaagatgttgatgttgaaatctggcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggttttcttttcttaagttacc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||||| || | |||| || ||||||||||||| |||| ||||||||||||||| |
|
|
| T |
17744615 |
ccactcaagatgttgatgttgaaatctggcaggaaactagaaagactaatgatgaccaaggtaaaaaatctttggatcgattttattttcttaagttacc |
17744516 |
T |
|
| Q |
204 |
tcatcgcccttttcattttgaagttaacct-tcttctttctcaccttttctc-agtttctctaaatgatgacgatgtcatgaaagtaagatcaaatattg |
301 |
Q |
| |
|
||||||| ||||||||||||||||| | || |||||||||||||| ||| || |||||||||||||||||| ||||| |||||||||| |||||||||| |
|
|
| T |
17744515 |
tcatcgctcttttcattttgaagttgaactctcttctttctcaccctttgtccagtttctctaaatgatgatgatgttgtgaaagtaagctcaaatattg |
17744416 |
T |
|
| Q |
302 |
agcaacagtttcccaaggaagatgaaatattagtttccaaatcaagaccctcttctattgaatctcagtgtccttcaaagtctactcaaggtattttatt |
401 |
Q |
| |
|
|| | || ||||| || | ||||||||||||||||||||||||| ||| |||| ||||| ||| |||| |||||||||| ||||| |||||||||||| |
|
|
| T |
17744415 |
aggatcaatttcctaaaaatgatgaaatattagtttccaaatcaataccatcttgtattgcatcccagtatccttcaaagcctactggaggtattttatt |
17744316 |
T |
|
| Q |
402 |
gcatcannnnnnnnaaattaattttctagtgctcaaatatgcataaacattatttcatgtactctcatctcaggggaaccttctcaaagagatgaagatt |
501 |
Q |
| |
|
|| ||| || |||||||||| ||||||||||| || ||| ||| |||| | |||| ||| | ||| |||||||||| ||| ||||| |
|
|
| T |
17744315 |
gcttcattttatctaa-ttaattttcttgtgctcaaataggcttaattattctttcctatactttca-----gaggacccttctcaaaaaga---agatt |
17744225 |
T |
|
| Q |
502 |
taagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaa |
601 |
Q |
| |
|
| |||||||||| |||||| ||||||||||| | ||||| |||||||| ||||| | | |||||| |||||||| |||||||||||| ||||||| |
|
|
| T |
17744224 |
tcagttcttctttgtttgtcaagagggagcttgatcaactagtctccaagaagcatttcgattatgagaacttgtcttttttgactgatttctttgttaa |
17744125 |
T |
|
| Q |
602 |
gcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactca |
701 |
Q |
| |
|
|||||||||| ||||| ||| | ||||||||||||||| | |||||||||||| |||||||||| || ||||| ||||||||||||||||||||||||| |
|
|
| T |
17744124 |
gcatccttcaattcttttaaaggacacttcattgagtaacagatacaagggtt-atgcctacaattgcctagctgagctattgaaattccttcaaactcg |
17744026 |
T |
|
| Q |
702 |
tagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatc |
801 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| | | |
|
|
| T |
17744025 |
tagtgtgttggatgtgttaggttcaagcaactctgaatttgtcgagttattacaagatgtgcgcagatttccttttgataagaaatggttggatggtgtt |
17743926 |
T |
|
| Q |
802 |
gaaaagcttgctttgtttcatgggttcgcaagtctctcaagatgcatttgcaaaaattgttggactcaaaacacattt |
879 |
Q |
| |
|
||||||| |||||||||| | |||| |||||||||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
17743925 |
gaaaagcgcgctttgtttcct-ggtttacaagtctctcaagatgca-ttgcaaaaattgttggactcaaaacatattt |
17743850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 104 - 879
Target Start/End: Complemental strand, 19045935 - 19045170
Alignment:
| Q |
104 |
ccactcaagatgttgatgttgaaatctggcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggttttcttttcttaagttacc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||||| || | |||| || ||||||||||||| |||| ||||||||||||||| |
|
|
| T |
19045935 |
ccactcaagatgttgatgttgaaatctggcaggaaactagaaagactaatgatgaccaaggtaaaaaatctttggatcgattttattttcttaagttacc |
19045836 |
T |
|
| Q |
204 |
tcatcgcccttttcattttgaagttaacct-tcttctttctcaccttttctc-agtttctctaaatgatgacgatgtcatgaaagtaagatcaaatattg |
301 |
Q |
| |
|
||||||| ||||||||||||||||| | || |||||||||||||| ||| || |||||||||||||||||| ||||| |||||||||| |||||||||| |
|
|
| T |
19045835 |
tcatcgctcttttcattttgaagttgaactctcttctttctcaccctttgtccagtttctctaaatgatgatgatgttgtgaaagtaagctcaaatattg |
19045736 |
T |
|
| Q |
302 |
agcaacagtttcccaaggaagatgaaatattagtttccaaatcaagaccctcttctattgaatctcagtgtccttcaaagtctactcaaggtattttatt |
401 |
Q |
| |
|
|| | || ||||| || | ||||||||||||||||||||||||| ||| |||| ||||| ||| |||| |||||||||| ||||| |||||||||||| |
|
|
| T |
19045735 |
aggatcaatttcctaaaaatgatgaaatattagtttccaaatcaataccatcttgtattgcatcccagtatccttcaaagcctactggaggtattttatt |
19045636 |
T |
|
| Q |
402 |
gcatcannnnnnnnaaattaattttctagtgctcaaatatgcataaacattatttcatgtactctcatctcaggggaaccttctcaaagagatgaagatt |
501 |
Q |
| |
|
|| ||| || |||||||||| ||||||||||| || ||| ||| |||| | |||| ||| | ||| |||||||||| ||| ||||| |
|
|
| T |
19045635 |
gcttcattttatctaa-ttaattttcttgtgctcaaataggcttaattattctttcctatactttca-----gaggacccttctcaaaaaga---agatt |
19045545 |
T |
|
| Q |
502 |
taagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaa |
601 |
Q |
| |
|
| |||||||||| |||||| ||||||||||| | ||||| |||||||| ||||| | | |||||| |||||||| |||||||||||| ||||||| |
|
|
| T |
19045544 |
tcagttcttctttgtttgtcaagagggagcttgatcaactagtctccaagaagcatttcgattatgagaacttgtcttttttgactgatttctttgttaa |
19045445 |
T |
|
| Q |
602 |
gcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactca |
701 |
Q |
| |
|
|||||||||| ||||| ||| | ||||||||||||||| | |||||||||||| |||||||||| || ||||| ||||||||||||||||||||||||| |
|
|
| T |
19045444 |
gcatccttcaattcttttaaaggacacttcattgagtaacagatacaagggtt-atgcctacaattgcctagctgagctattgaaattccttcaaactcg |
19045346 |
T |
|
| Q |
702 |
tagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatc |
801 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| | | |
|
|
| T |
19045345 |
tagtgtgttggatgtgttaggttcaagcaactctgaatttgtcgagttattacaagatgtgcgcagatttccttttgataagaaatggttggatggtgtt |
19045246 |
T |
|
| Q |
802 |
gaaaagcttgctttgtttcatgggttcgcaagtctctcaagatgcatttgcaaaaattgttggactcaaaacacattt |
879 |
Q |
| |
|
||||||| |||||||||| | |||| |||||||||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
19045245 |
gaaaagcgcgctttgtttcct-ggtttacaagtctctcaagatgca-ttgcaaaaattgttggactcaaaacatattt |
19045170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 255 - 879
Target Start/End: Original strand, 11421393 - 11422012
Alignment:
| Q |
255 |
agtttctctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaacagtttcccaaggaagatgaaatattagtttccaaatcaagaccctct |
354 |
Q |
| |
|
|||||||| ||||||||| | | ||| ||||||||||||||||| |||| |||||||||| | ||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
11421393 |
agtttctcgaaatgatgatgctttcaagaaagtaagatcaaatactgaggaacagtttcctacggatgatgatatattagtttccaaatcaagaccctct |
11421492 |
T |
|
| Q |
355 |
tctattgaatctcagtgtccttcaaagtctactcaaggtattttattgcatcannnnnnnn------aaattaattttctagtgctcaaatatgcataaa |
448 |
Q |
| |
|
| ||||| |||||||| ||||| ||| || | ||||||||||||||| ||| || || ||||| | |||| |||||||||||| |
|
|
| T |
11421493 |
tatattgcatctcagtatcctttaaaacctgttgaaggtattttattgcttcagtttatttttaattaattttattttattgtgcataaatatgcataat |
11421592 |
T |
|
| Q |
449 |
cattatttcatgtactctcatctcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggag---cttgagaatctagtt |
545 |
Q |
| |
|
|||||||| | |||| ||| ||||| |||||||||| || ||||||||| |||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
11421593 |
tattatttcctatactttca-----ggggacccttctcaaatagttgaagattt------ttcttgggttgtcacaagggaggagcttgagaatctagtt |
11421681 |
T |
|
| Q |
546 |
tccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgat |
645 |
Q |
| |
|
|||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||| |
|
|
| T |
11421682 |
tccaagaaccatttggctattgagaacttgtctttgttgactgaattccttgttaagcatccgtctgttcttctaagggacacttcattgagtagcagat |
11421781 |
T |
|
| Q |
646 |
acaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcg |
745 |
Q |
| |
|
||||||||| |||||||||| || ||||| ||||||||||||||||| || || ||||||||||| || |||||||||||||| ||||| |||| | | |
|
|
| T |
11421782 |
acaagggtt-atgcctacaattgcctagctgagctattgaaattcctccagacccatagtgtgttagacgtgttaggttcaagaaactctacatttgttg |
11421880 |
T |
|
| Q |
746 |
agttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatgggttcgcaagtctctcaagatg |
845 |
Q |
| |
|
||||| |||||||||| || || ||||||||||| || ||||||||||||| | | ||||||| |||||||||| | |||| |||||||||||||||| |
|
|
| T |
11421881 |
agttaatacaagatgtgcgtagatttccttttgacaaagaatggttggatggtgttgaaaagcgcgctttgtttcct-ggtttacaagtctctcaagatg |
11421979 |
T |
|
| Q |
846 |
catttgcaaaaattgttggactcaaaacacattt |
879 |
Q |
| |
|
|| ||||||||||||||| |||||||| |||||| |
|
|
| T |
11421980 |
ca-ttgcaaaaattgttgaactcaaaatacattt |
11422012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 471 - 879
Target Start/End: Original strand, 28163032 - 28163437
Alignment:
| Q |
471 |
tcaggggaaccttctcaaagagatgaagatttaagttcttctt-gcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgag |
569 |
Q |
| |
|
|||||||| |||||||||| || |||||||| |||||||||| |||| |||| |||||||||||| | ||||| |||||||| ||||| | | ||| |
|
|
| T |
28163032 |
tcaggggacccttctcaaaaagtagaagatttcagttcttctttgcat-gtcaagagggagcttgagcaactagtctccaagaagcatttcgattatgat |
28163130 |
T |
|
| Q |
570 |
aaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgt |
669 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||| | |||||||||||| || ||||||| ||| |
|
|
| T |
28163131 |
aacttgtctttgttgactgatttctttgttaagcatcctttggttcttttaaacgacacttcattgagtaacagatacaagggtt-atacctacaattgt |
28163229 |
T |
|
| Q |
670 |
ctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagtt |
769 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| |||||| | |
|
|
| T |
28163230 |
ctagcggagctattgaaattcctccaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttactacaagatgcacgcagat |
28163329 |
T |
|
| Q |
770 |
ttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatgggttcgcaagtctctcaagatgcatttgcaaaaattgttggactca |
869 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||| |||||||| | | |||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28163330 |
ttccatttcataaggaatggttggatgatatcgaaaagcgcgctttgttgcct-ggtttacaagtctctcaagatgca-ttgcaaaaattgttggactca |
28163427 |
T |
|
| Q |
870 |
aaacacattt |
879 |
Q |
| |
|
|||||||||| |
|
|
| T |
28163428 |
aaacacattt |
28163437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 182; E-Value: 7e-98
Query Start/End: Original strand, 339 - 823
Target Start/End: Original strand, 27920463 - 27920941
Alignment:
| Q |
339 |
caaatcaagaccctcttctattgaatctcagtgtccttcaaagtctactcaaggtattttattgcatcannnnnnnna-aattaattttctagtgctcaa |
437 |
Q |
| |
|
|||||||||| |||||||||||| |||||||| |||||||||| || || |||||||||||||| ||| ||||| |||||| ||||||| |
|
|
| T |
27920463 |
caaatcaagaacctcttctattgcatctcagtttccttcaaagccttctgaaggtattttattgtttcattttatttttaattagttttctt-tgctcaa |
27920561 |
T |
|
| Q |
438 |
atatgcataaacattatttcatgtactctcatctcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgaga |
537 |
Q |
| |
|
|||||||||| ||| |||| | |||| ||| ||||| |||||||||| |||| ||||| ||||||| |||| |||| |||| ||||||||||| |
|
|
| T |
27920562 |
atatgcataattattctttcctatactttca-----ggggacccttctcaaatagataaagatctaagttcatctttggttgtgacaaaggagcttgaga |
27920656 |
T |
|
| Q |
538 |
atctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgag |
637 |
Q |
| |
|
||||||| |||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||| |||| |
|
|
| T |
27920657 |
atctagtctccaagaagcatttggctattgagaacttgtctttgttgactgacttccttgttaagcatccttcagttcttctaagggacacttcactgag |
27920756 |
T |
|
| Q |
638 |
tagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctga |
737 |
Q |
| |
|
|||| |||||||||||| || |||||||||| ||||| ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
27920757 |
tagcagatacaagggtt-attcctacaactgcctagctgagctattgcgattcctccaaactcatagtgcgttggatgtgttaggttcaagccactctga |
27920855 |
T |
|
| Q |
738 |
atttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatg |
823 |
Q |
| |
|
|||| | || |||||||||||||| ||||| | | ||||||||| || |||||||||| | | ||||||| ||||||| ||||| |
|
|
| T |
27920856 |
atttgttgatttattacaagatgtgcgcagatgtggttttgataaagattggttggatggtgttgaaaagcgcgctttgtctcatg |
27920941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 573 - 879
Target Start/End: Original strand, 28187144 - 28187447
Alignment:
| Q |
573 |
ttgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtcta |
672 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||| | |||||||||||| ||||||||||||| ||| |
|
|
| T |
28187144 |
ttgtctttgttgactgatttctttgttaagcatccttcggttcttttaaacgacacttcattgagtaacagatacaagggtt-atgcctacaactgccta |
28187242 |
T |
|
| Q |
673 |
gccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttc |
772 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| ||| |
|
|
| T |
28187243 |
gctgagctattgaaattcctccaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttattacaagatgtgcgcaaatttg |
28187342 |
T |
|
| Q |
773 |
cttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatgggttcgcaagtctctcaagatgcatttgcaaaaattgttggactcaaaa |
872 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | |||||||| | | |||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28187343 |
gttttgataaggaatggttggatgatattgaaaaacgcgctttgttgcct-ggtttacaagtctctcaagatgca-ttgcaaaaattgttggactcaaaa |
28187440 |
T |
|
| Q |
873 |
cacattt |
879 |
Q |
| |
|
||||||| |
|
|
| T |
28187441 |
cacattt |
28187447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 471 - 879
Target Start/End: Original strand, 28057568 - 28057973
Alignment:
| Q |
471 |
tcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgaga |
570 |
Q |
| |
|
||||||| |||||||||| || |||||||| |||||||||| |||||| |||||||||||| | ||| | |||||||| ||||| | | ||||| |
|
|
| T |
28057568 |
tcaggggttccttctcaaaaagtagaagatttcagttcttctttgcttgtcaagagggagcttgagcaactactctccaagaagcatttggattatgaga |
28057667 |
T |
|
| Q |
571 |
aattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtc |
670 |
Q |
| |
|
| |||||||||||||||||||| ||||||| |||||||| ||| | | | | ||||||||||||||| | |||||||||||| |||||||||| || | |
|
|
| T |
28057668 |
acgtgtctttgttgactgatttctttgttaaacatccttctgttcgtttgaaggacacttcattgagtaacagatacaagggtt-atgcctacaattgcc |
28057766 |
T |
|
| Q |
671 |
tagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttt |
770 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| || |
|
|
| T |
28057767 |
tagctgagctattgaaattcctccaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttattacaagatgtgcgcaaatt |
28057866 |
T |
|
| Q |
771 |
tccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatgggttcgcaagtctctcaagatgcatttgcaaaaattgttggactcaa |
870 |
Q |
| |
|
| ||||||||||||||||||||||||||| ||||| | | |||||| | | |||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
28057867 |
tggttttgataaggaatggttggatgatattgaaaaacgcgttttgttgcct-ggtttacaagtctctcaagatgca-ttgcaaaaattgttggactcaa |
28057964 |
T |
|
| Q |
871 |
aacacattt |
879 |
Q |
| |
|
||||||||| |
|
|
| T |
28057965 |
aacacattt |
28057973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 471 - 879
Target Start/End: Original strand, 28067993 - 28068398
Alignment:
| Q |
471 |
tcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgaga |
570 |
Q |
| |
|
||||||| |||||||||| || |||||||| |||||||||| |||||| |||||||||||| | ||| | |||||||| ||||| | | ||||| |
|
|
| T |
28067993 |
tcaggggttccttctcaaaaagtagaagatttcagttcttctttgcttgtcaagagggagcttgagcaactactctccaagaagcatttggattatgaga |
28068092 |
T |
|
| Q |
571 |
aattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtc |
670 |
Q |
| |
|
| |||||||||||||||||||| ||||||| |||||||| ||| | | | | ||||||||||||||| | |||||||||||| |||||||||| || | |
|
|
| T |
28068093 |
acgtgtctttgttgactgatttctttgttaaacatccttctgttcgtttgaaggacacttcattgagtaacagatacaagggtt-atgcctacaattgcc |
28068191 |
T |
|
| Q |
671 |
tagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttt |
770 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| || |
|
|
| T |
28068192 |
tagctgagctattgaaattcctccaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttattacaagatgtgcgcaaatt |
28068291 |
T |
|
| Q |
771 |
tccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatgggttcgcaagtctctcaagatgcatttgcaaaaattgttggactcaa |
870 |
Q |
| |
|
| ||||||||||||||||||||||||||| ||||| | | |||||| | | |||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
28068292 |
tggttttgataaggaatggttggatgatattgaaaaacgcgttttgttgcct-ggtttacaagtctctcaagatgca-ttgcaaaaattgttggactcaa |
28068389 |
T |
|
| Q |
871 |
aacacattt |
879 |
Q |
| |
|
||||||||| |
|
|
| T |
28068390 |
aacacattt |
28068398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 167; E-Value: 6e-89
Query Start/End: Original strand, 471 - 817
Target Start/End: Original strand, 27954559 - 27954904
Alignment:
| Q |
471 |
tcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgaga |
570 |
Q |
| |
|
|||||||| |||||||||| ||||| |||||||||||||| || ||||||||||||||||||| ||| || | ||||| || ||||| |||||||||| |
|
|
| T |
27954559 |
tcaggggacccttctcaaatagatggagatttaagttcttatttggttgtcacaagggagcttgaaaatataatctccaataagcatttggctattgaga |
27954658 |
T |
|
| Q |
571 |
aattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtc |
670 |
Q |
| |
|
| ||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||| || |||||||||| | |
|
|
| T |
27954659 |
acttgtctttgttgactgatttcctagttaagcatccttcatttcttacaagggacacttcatggagtagcagatacaagggtt-attcctacaactgcc |
27954757 |
T |
|
| Q |
671 |
tagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttt |
770 |
Q |
| |
|
|||| ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | || |||||||||||||| ||||| | |
|
|
| T |
27954758 |
tagctgagctattgcgattcctccaaactcatagtgcgttggatgtgttaggttcaagccactctgaatttgttgatttattacaagatgtgcgcagatg |
27954857 |
T |
|
| Q |
771 |
tccttttgataaggaatggttggatgatatcgaaaagcttgctttgt |
817 |
Q |
| |
|
| ||||||||| || |||||||||| | | ||||||| ||||||| |
|
|
| T |
27954858 |
tggttttgataaagattggttggatggtgttgaaaagcacgctttgt |
27954904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 335 - 796
Target Start/End: Complemental strand, 27430870 - 27430403
Alignment:
| Q |
335 |
tttccaaatcaagaccctcttctattgaatctcagtgtccttcaaagtctactcaaggtattttattgcatca-nnnnnnnnaaattaattttctagtgc |
433 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||||||||| || || ||| ||||||||||| ||| |||||||||||| |||| |
|
|
| T |
27430870 |
tttccaaatcaagaccctcttatattgcatctcagtgtccttcaaagcctgctgaagttattttattgcttcattgtagttttaattaattttcttgtgc |
27430771 |
T |
|
| Q |
434 |
tcaaatatgcataaacattatttcatgtactctcatctcaggggaacct------tctcaaagagatgaagatttaagttcttcttgcattgtcacaagg |
527 |
Q |
| |
|
| || || |||||| || | | | |||| | | ||||||||||| ||||||| ||||||| |||| ||||| |||| |||||||| | |
|
|
| T |
27430770 |
tgaagtaggcataattatattgttctttactatacttacaggggaaccttctcaatctcaaatagatgaatattttagttcgtctttggctgtcacaaag |
27430671 |
T |
|
| Q |
528 |
gagcttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcaca |
627 |
Q |
| |
|
|| || ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| | ||| | || |
|
|
| T |
27430670 |
gaactcgagaatctagtctccaagaatcatttggctatcgagaacttgtctttgttgactgatttccttgttaagcatccttctgttcatttaaaggacc |
27430571 |
T |
|
| Q |
628 |
cttcattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaa |
727 |
Q |
| |
|
|||||||||||| | |||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||| | |||| ||||||||||||| ||||||||| |
|
|
| T |
27430570 |
cttcattgagtaacagatacaagggtt-atgcctacaactgcctagctgagctattgaaattcctccaaccacataatgtgttggatgtggtaggttcaa |
27430472 |
T |
|
| Q |
728 |
gccactctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatg |
796 |
Q |
| |
|
|||||||||||||| | ||||||||||||||||| || || |||||||||||||||||||||||||||| |
|
|
| T |
27430471 |
gccactctgaatttgttgagttattacaagatgtgcgtagatttccttttgataaggaatggttggatg |
27430403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 471 - 820
Target Start/End: Complemental strand, 8538860 - 8538512
Alignment:
| Q |
471 |
tcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgaga |
570 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||||| |||||||| |||||||||||||| |||||||| | |
|
|
| T |
8538860 |
tcaggggacccttctcaattagatgaagatttaatttcttctttggttgtcacaagggagcttgaaaatctagtctccaagaatcatttggctattgata |
8538761 |
T |
|
| Q |
571 |
aattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtc |
670 |
Q |
| |
|
| |||| |||||||| ||||||||||||| ||||||||| ||||| ||| | || ||||| | |||| | |||||||||||| ||||||||||||||| |
|
|
| T |
8538760 |
acatgtccttgttgaccaatttccttgttaaccatccttcaattcttttaacggacgcttcactaagtaacagatacaagggtt-atgcctacaactgtc |
8538662 |
T |
|
| Q |
671 |
tagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttt |
770 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| || | | |
|
|
| T |
8538661 |
tagctgagctattgaaattcctccaaactcatattgtgttggatgtgttaggttcaagccaatctgaatttgttgagttattacaagatgtgcgaaaatg |
8538562 |
T |
|
| Q |
771 |
tccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttc |
820 |
Q |
| |
|
| |||||||||||| ||||||||| | | ||||||| |||||||||| |
|
|
| T |
8538561 |
tggttttgataaggattggttggatcgtgttgaaaagcgcgctttgtttc |
8538512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 471 - 758
Target Start/End: Original strand, 30993721 - 30994007
Alignment:
| Q |
471 |
tcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgaga |
570 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||| ||||||||||||| | |
|
|
| T |
30993721 |
tcaggggacccttctcaaatagatgaagatttaagttcttctttggttgtcacaggggagcttgagaatctagtctccaagaagtatttagctattgata |
30993820 |
T |
|
| Q |
571 |
aattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtc |
670 |
Q |
| |
|
| |||| |||||||| |||||||||||||| ||||||||| ||||||||||| ||| |||| ||||| | |||| ||||||| ||||||||||||||| |
|
|
| T |
30993821 |
acttgtacttgttgacggatttccttgttaatcatccttcaattcttctaaggaacagttcaccgagtaacagatataagggtt-atgcctacaactgtc |
30993919 |
T |
|
| Q |
671 |
tagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaaga |
758 |
Q |
| |
|
|||| || |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| | ||||||||| |||| |
|
|
| T |
30993920 |
tagctgatctattgaaattcctccaaacgcattgtgtgttggatgtgttaggttcaagccactctgaatttgttgagttattagaaga |
30994007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 57 - 379
Target Start/End: Original strand, 28037413 - 28037737
Alignment:
| Q |
57 |
ccaaagagcaatagcttctacttcaatcgccataacaaagcctctaaccactcaagatgttgatgttgaaatctggcaggaaactagtaacactaatgac |
156 |
Q |
| |
|
||||||||| ||||||||| ||||||| |||||||||||||| | |||||| ||||||||||| | ||| ||||| |||||||||||||||||||| |
|
|
| T |
28037413 |
ccaaagagccatagcttctccttcaattaccataacaaagcctgttaccactgaagatgttgatctcaaaaactggcgcgaaactagtaacactaatgat |
28037512 |
T |
|
| Q |
157 |
gatcgaggtgaagaatctttggatcggttttcttttcttaagttacctcatcgcccttttcattttgaag-ttaaccttcttctttctcacctt-ttctc |
254 |
Q |
| |
|
| || |||| |||| |||||||||| || || |||||| ||||||||||||| ||||||||||||||||| ||||| ||||||| |||||| | || |
|
|
| T |
28037513 |
ggtcaaggtaaagactctttggatcagtgttattttctaaagttacctcatcacccttttcattttgaagtttaactcgcttcttttccaccttctgttc |
28037612 |
T |
|
| Q |
255 |
agtttctctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaacagtttcccaaggaagatgaaatattagtttccaaatcaagaccctct |
354 |
Q |
| |
|
||||| || ||||||||| |||||||||||||||| |||||||||||| | |||||| | ||||| ||||| || |||||||||||||||||||||||| |
|
|
| T |
28037613 |
agtttatccaaatgatgataatgtcatgaaagtaagttcaaatattgaggatcagttttctaaggatgatgacatgttagtttccaaatcaagaccctct |
28037712 |
T |
|
| Q |
355 |
tctattgaatctcagtgtccttcaa |
379 |
Q |
| |
|
||||||| |||||| | |||||||| |
|
|
| T |
28037713 |
tctattgcatctcattttccttcaa |
28037737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 471 - 820
Target Start/End: Original strand, 28037895 - 28038243
Alignment:
| Q |
471 |
tcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgaga |
570 |
Q |
| |
|
|||||||| |||||||||| ||| ||| |||||||| ||||| |||||| | ||| |||||||||||||| || ||||| ||||| |||||||| | |
|
|
| T |
28037895 |
tcaggggacccttctcaaatagaaaaagctttaagttattctttggttgtcaaagcggaacttgagaatctagtctctaagaagcatttggctattgata |
28037994 |
T |
|
| Q |
571 |
aattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtc |
670 |
Q |
| |
|
| ||||||||||||||||||||| |||||||||||||||| || | ||| | |||||| |||||||| |||||||| ||| |||| |||||||| | |
|
|
| T |
28037995 |
atttgtctttgttgactgatttctttgttaagcatccttctggtcgtttaaaggacacttaattgagtaaaagatacaagagtt-atgcttacaactgcc |
28038093 |
T |
|
| Q |
671 |
tagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttt |
770 |
Q |
| |
|
||| ||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||| | ||||| ||||||||||| ||||| | |
|
|
| T |
28038094 |
tagtcgatctattgaaattcctccaaacgcatagtgtgttggatgtgttaggttcaagccacactgaatttgttgagttgttacaagatgtgcgcagatg |
28038193 |
T |
|
| Q |
771 |
tccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttc |
820 |
Q |
| |
|
| ||| ||||| || ||||| |||| | ||||||||| ||||||||||| |
|
|
| T |
28038194 |
tagtttcgataaagattggtttgatggtgtcgaaaagcgtgctttgtttc |
28038243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 471 - 759
Target Start/End: Complemental strand, 18078976 - 18078689
Alignment:
| Q |
471 |
tcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgaga |
570 |
Q |
| |
|
|||||||| ||||||| | ||| ||||||||||||||||||| ||||| | |||||||||||||| ||||| || |||| |||| | ||||| |
|
|
| T |
18078976 |
tcaggggactcttctcatatagaagaagatttaagttcttctttgcttgtcgcgagggagcttgagaaactagtctctgagaagtatttgaattatgaga |
18078877 |
T |
|
| Q |
571 |
aattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtc |
670 |
Q |
| |
|
| || |||||||||||||||||| |||||||| |||||||| |||| ||| | ||||||||||||||| | |||||||||||| |||||||||| || | |
|
|
| T |
18078876 |
acttttctttgttgactgatttctttgttaagaatccttcagttctcttaaaggacacttcattgagtaacagatacaagggtt-atgcctacaattgcc |
18078778 |
T |
|
| Q |
671 |
tagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagat |
759 |
Q |
| |
|
|||| ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| |
|
|
| T |
18078777 |
tagctgagctattgaaattcctccaaacgcataatgtgttggatgtgttaggttcaagccattctgaatttgttgagttattacaagat |
18078689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 103 - 398
Target Start/End: Complemental strand, 8539381 - 8539081
Alignment:
| Q |
103 |
accactcaagatgttgatgttgaaatctggcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggttttcttttcttaagttac |
202 |
Q |
| |
|
||||||||||||||||||||| || | |||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||| |||||||||||||| |
|
|
| T |
8539381 |
accactcaagatgttgatgttaaactttggcaggaaactagtaacactaatattaatcaaggtgaagaatccttggatcagttttattttcttaagttac |
8539282 |
T |
|
| Q |
203 |
ctcatcgcccttttcatttt---gaagttaacct-tcttctttctcaccttttct-cagtttctctaaatgatgacgatgtcatgaaagtaagatcaaat |
297 |
Q |
| |
|
|| || ||||||||||||| |||||| | || ||||||||| |||| ||| | ||| || |||||||||||| | || |||||||||||| |||||| |
|
|
| T |
8539281 |
cttgtcacccttttcattttcatgaagttgaactctcttctttcccaccctttgttcagcttttctaaatgatgatgttgccatgaaagtaagctcaaat |
8539182 |
T |
|
| Q |
298 |
attgagcaacagtttcccaaggaagatgaaatattagtttccaaatcaagaccctcttctattgaatctcagtgtccttcaaagtctactcaaggtattt |
397 |
Q |
| |
|
||| || | ||||||| ||||| || ||||||||||||||||||||||||| ||||| |||| |||||||| |||||||||| || || ||||||||| |
|
|
| T |
8539181 |
attcagaatgagtttcctaaggatgaagaaatattagtttccaaatcaagactctcttgtattccatctcagtctccttcaaagccttctgaaggtattt |
8539082 |
T |
|
| Q |
398 |
t |
398 |
Q |
| |
|
| |
|
|
| T |
8539081 |
t |
8539081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 58 - 326
Target Start/End: Original strand, 11420963 - 11421232
Alignment:
| Q |
58 |
caaagagcaatagcttctacttcaatcgccataacaaagcctctaaccactcaagatgttgatgttgaaatctggcaggaaactagtaacactaatgacg |
157 |
Q |
| |
|
|||| ||| ||||||||| || ||| ||||||||||||||| |||| |||||||||||||||| ||||||| |||||||||||||| ||||||| | |
|
|
| T |
11420963 |
caaatagccatagcttctcctcaaattgccataacaaagcctgctaccattcaagatgttgatgttaaaatctgtcaggaaactagtaaggctaatgatg |
11421062 |
T |
|
| Q |
158 |
atcgaggtgaagaatctttggatcggttttcttttcttaagttacctcatcgcccttttcattttgaagtt-aaccttcttctttctcaccttttctcag |
256 |
Q |
| |
|
||| |||||| || |||||||||| ||||| |||||||||||||| |||| |||||||||||| |||||| ||| ||||||||| ||| ||| |||| |
|
|
| T |
11421063 |
atcaaggtgatgactctttggatcagttttattttcttaagttacgacatcacccttttcatttagaagttgaactctcttctttcccactgtttgtcag |
11421162 |
T |
|
| Q |
257 |
tttctctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaacagtttcccaaggaagatga |
326 |
Q |
| |
|
|| ||||||||||||| | ||||||||||| ||| |||||||||||||||| || || ||||| ||||| |
|
|
| T |
11421163 |
ttgctctaaatgatgatgctgtcatgaaagcaagcacaaatattgagcaacatttacctaaggatgatga |
11421232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 525 - 819
Target Start/End: Original strand, 27776978 - 27777271
Alignment:
| Q |
525 |
agggagcttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggc |
624 |
Q |
| |
|
||||| |||||||| |||||||| |||| ||||| | |||||| |||||||||||||||||||| |||| ||| ||||||| ||||| | ||| |
|
|
| T |
27776978 |
agggaacttgagaaactagtttctgagaagcatttggactgtgagaacttgtctttgttgactgattttcttgataacaatccttctgttcttttgaggg |
27777077 |
T |
|
| Q |
625 |
acacttcattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggtt |
724 |
Q |
| |
|
|||||||| |||||| |||||||| ||| || ||||||||||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
27777078 |
acacttcactgagtaatagatacaagagtt-attcctacaactgtcttgctgagctattgaaattcctccaaaaccatagtgtgttggatgtgttaggtt |
27777176 |
T |
|
| Q |
725 |
caagccactctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgttt |
819 |
Q |
| |
|
|||||| |||||| ||| ||||||||||||||||||||||| | | ||||||||| || |||||||||| | | ||||| | |||||||||| |
|
|
| T |
27777177 |
caagccgctctgagtttgatgagttattacaagatgtacgcagatgtggttttgataaagattggttggatggtgttgaaaaacgtgctttgttt |
27777271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 566 - 795
Target Start/End: Complemental strand, 27458477 - 27458249
Alignment:
| Q |
566 |
tgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaa |
665 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||| ||||| ||| | |||| ||| |||||| |||||||||||| |||| ||| |
|
|
| T |
27458477 |
tgagaacttgtctttgttgactgatttccttgttaagcacccttcacttcttttaaaggacacatcactgagtaatagatacaagggtt-atgcttacgg |
27458379 |
T |
|
| Q |
666 |
ctgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgc |
765 |
Q |
| |
|
|||||| || ||||| || |||| |||||||| ||||||||||| |||||||| |||||||||| |||| ||||| | |||||||||||||||||||| |
|
|
| T |
27458378 |
ctgtctcgctgagctgttacaatttcttcaaacccatagtgtgtttgatgtgttgggttcaagccgctctaaatttgttaagttattacaagatgtacgc |
27458279 |
T |
|
| Q |
766 |
agttttccttttgataaggaatggttggat |
795 |
Q |
| |
|
|| ||| |||||||||||| ||||||||| |
|
|
| T |
27458278 |
agctttgcttttgataaggcttggttggat |
27458249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 85 - 327
Target Start/End: Complemental strand, 27458981 - 27458741
Alignment:
| Q |
85 |
gccataacaaagcctctaaccactcaagatgttgatgttgaaatctggcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggt |
184 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || ||||| || |||| ||||||||| |||||||||| | |
|
|
| T |
27458981 |
gccataacaaagcctcttaccactcaagatgttgatgttaaaatctggcaggaaactagcaagactaaggatgatcaaggtgaagactctttggatcaat |
27458882 |
T |
|
| Q |
185 |
tttcttttcttaagttacctcatcgcccttttcattttgaag-ttaaccttcttctttctcacctttt-ctcagtttctctaaatgatgacgatgtcatg |
282 |
Q |
| |
|
| | || ||||| || ||| ||||||||||||||||| |||||| |||||||| || |||| |||||||||||||||||||| | |||||| |
|
|
| T |
27458881 |
ctgatatt----agttatcttatcacccttttcattttgaagtttaaccctcttctttgcaactttttgttcagtttctctaaatgatgatgctgtcata |
27458786 |
T |
|
| Q |
283 |
aaagtaagatcaaatattgagcaacagtttcccaaggaagatgaa |
327 |
Q |
| |
|
|||||||| |||||||||||| | |||||||| || || |||||| |
|
|
| T |
27458785 |
aaagtaagctcaaatattgagaatcagtttcctaacgatgatgaa |
27458741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 469 - 796
Target Start/End: Complemental strand, 28479602 - 28479276
Alignment:
| Q |
469 |
tctcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattga |
568 |
Q |
| |
|
||||||| || |||||||||| | ||||||||||||||||||| |||||| || ||||||||| | ||||| |||||||||||||| | | ||| |
|
|
| T |
28479602 |
tctcaggagacccttctcaaaatgtagaagatttaagttcttctttgcttgtcaagagtgagcttgaggaactagtctccaagaatcatttggattgtga |
28479503 |
T |
|
| Q |
569 |
gaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactg |
668 |
Q |
| |
|
||| |||||||||||||||| ||||||||||| | ||||||| ||| | ||| | ||| | || |||||| |||||||||||| ||||||||| | |
|
|
| T |
28479502 |
gaacttgtctttgttgactgctttccttgttaggaatccttctgttcgtttaaaggacattgcactgagtaatagatacaagggttg-tgcctacaattt |
28479404 |
T |
|
| Q |
669 |
tctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagt |
768 |
Q |
| |
|
|||||||| ||||||||||||||| |||| |||||||||||||| || || || | |||||||| ||||| | |||||||||||||||| ||||| |
|
|
| T |
28479403 |
actagccgaactattgaaattccttgaaacccatagtgtgttggaagtattggggccgtgccactctaaatttgtggagttattacaagatgcgcgcagc |
28479304 |
T |
|
| Q |
769 |
tttccttttgataaggaatggttggatg |
796 |
Q |
| |
|
||| ||| |||||||| |||||||||| |
|
|
| T |
28479303 |
tttggtttagataaggattggttggatg |
28479276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 86 - 269
Target Start/End: Original strand, 28149970 - 28150155
Alignment:
| Q |
86 |
ccataacaaagcctctaaccactcaagatgttgatgttgaaatctggcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggtt |
185 |
Q |
| |
|
||||||||| |||||| ||||||||||| ||| ||||| | | || |||||||||||||||||||||||| |||| ||||||||| |||| ||||| || |
|
|
| T |
28149970 |
ccataacaaggcctcttaccactcaagaagttcatgttaataacttgcaggaaactagtaacactaatgatgatcaaggtgaagagtcttaggatcaatt |
28150069 |
T |
|
| Q |
186 |
ttcttttcttaagttacctcatcgcccttttcattttgaag-ttaaccttcttctttctcacctttt-ctcagtttctctaaatga |
269 |
Q |
| |
|
|| ||||||||||||| |||||| ||||||||||||||||| |||| |||||| || |||||||| ||||||||||||||||| |
|
|
| T |
28150070 |
ttattttcttaagttatctcatcacccttttcattttgaagtttaaatctcttctctcacaccttttgttcagtttctctaaatga |
28150155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 469 - 796
Target Start/End: Complemental strand, 28508785 - 28508459
Alignment:
| Q |
469 |
tctcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattga |
568 |
Q |
| |
|
||||||| || |||||||||| | ||||||||||||||||||| |||||| || ||||||||| | ||||| ||||||||| |||| | | ||| |
|
|
| T |
28508785 |
tctcaggagacccttctcaaaatgtagaagatttaagttcttctttgcttgtcaagagtgagcttgagcaactagtctccaagaattatttggattgtga |
28508686 |
T |
|
| Q |
569 |
gaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactg |
668 |
Q |
| |
|
||| |||||||||||||||| ||||||||||||| ||||||| ||| | | | | ||||| || | |||| |||||||||||| ||||||||| | |
|
|
| T |
28508685 |
gaacttgtctttgttgactgttttccttgttaagaatccttctgttcatttgaaggacactgcacttagtaatagatacaagggtt-gtgcctacaattt |
28508587 |
T |
|
| Q |
669 |
tctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagt |
768 |
Q |
| |
|
||||| || ||||||||||||||| |||| |||||| ||||||| || || || || |||||||| ||||| | |||||| ||||||||| ||||| |
|
|
| T |
28508586 |
actagctgaactattgaaattccttgaaacccatagtatgttggaagtattggggtcgtgccactctaaatttgtggagttaatacaagatgcgcgcagc |
28508487 |
T |
|
| Q |
769 |
tttccttttgataaggaatggttggatg |
796 |
Q |
| |
|
||| |||||||||||| |||||||||| |
|
|
| T |
28508486 |
tttggttttgataaggattggttggatg |
28508459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 132 - 269
Target Start/End: Original strand, 28161925 - 28162064
Alignment:
| Q |
132 |
gcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggttttcttttcttaagttacctcatcgcccttttcattttgaag-ttaa |
230 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||| |||||||||| |||| ||||||||||||| |||||| ||||||||||||||||| |||| |
|
|
| T |
28161925 |
gcaggaaactagtaacactaatgatgatcaaggtgaagactctttggatcaattttattttcttaagttatctcatcacccttttcattttgaagtttaa |
28162024 |
T |
|
| Q |
231 |
ccttcttctttctcacctttt-ctcagtttctctaaatga |
269 |
Q |
| |
|
|||||| || |||||||| ||||||||||||||||| |
|
|
| T |
28162025 |
atctcttctctcacaccttttgttcagtttctctaaatga |
28162064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 132 - 289
Target Start/End: Original strand, 28185968 - 28186127
Alignment:
| Q |
132 |
gcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggttttcttttcttaagttacctcatcgcccttttcattttgaag-ttaa |
230 |
Q |
| |
|
||||||||||||||||||| |||| |||| ||||||||| |||||||||| |||| ||||||||||||| |||||| ||||||||||||||||| |||| |
|
|
| T |
28185968 |
gcaggaaactagtaacactgatgatgatcaaggtgaagactctttggatcaattttattttcttaagttatctcatcacccttttcattttgaagtttaa |
28186067 |
T |
|
| Q |
231 |
ccttcttctttctcacctttt-ctcagtttctctaaatgatgacgatgtcatgaaagtaa |
289 |
Q |
| |
|
|||||| || |||||||| |||||||||||||||||||| | ||| || ||||||| |
|
|
| T |
28186068 |
atctcttctctcacaccttttgttcagtttctctaaatgatgatgctgttataaaagtaa |
28186127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 27954347 - 27954471
Alignment:
| Q |
103 |
accactcaagatgttgatgttgaaatctggcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggttttcttttcttaagttac |
202 |
Q |
| |
|
||||||||| ||||||||| | ||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||| || || ||||| |||||||| |
|
|
| T |
27954347 |
accactcaatatgttgatgataaaatctggcaggaaactagtaacactaatgatgatcaaggtgaaaactctttggattagtgttgttttcataagttac |
27954446 |
T |
|
| Q |
203 |
ctcatcgcccttttcattttgaagtt |
228 |
Q |
| |
|
|||||| |||||||||||||||||| |
|
|
| T |
27954447 |
ctcatc-accttttcattttgaagtt |
27954471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 471 - 818
Target Start/End: Complemental strand, 26204365 - 26204022
Alignment:
| Q |
471 |
tcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgaga |
570 |
Q |
| |
|
|||| ||| |||||||||| || ||||||||||||||| ||| |||||| ||| ||||||||| | ||| | |||||||||||||| | | || | |
|
|
| T |
26204365 |
tcagaggacccttctcaaaaagtacaagatttaagttctt--tgc-ttgtcaaaagtgagcttgagcaactaatctccaagaatcatttggattgtggaa |
26204269 |
T |
|
| Q |
571 |
aattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtc |
670 |
Q |
| |
|
| || |||||||||||||||||| |||||||||||||||| | | | ||| |||||||| | |||| |||||||||||| ||||||||| | | |
|
|
| T |
26204268 |
atttttctttgttgactgatttctttgttaagcatccttctgtccgtttaaaagacacttcacttagtaatagatacaagggttg-tgcctacaatttac |
26204170 |
T |
|
| Q |
671 |
tagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttt |
770 |
Q |
| |
|
|||| || |||||||||||||| |||| |||| ||| ||||| || ||||| ||| ||||||||||||| | |||||||||||||||| | ||| || |
|
|
| T |
26204169 |
tagctgaactattgaaattcctcaaaacccataatgtattggaagtattaggctcattccactctgaatttctggagttattacaagatgcgcacagctt |
26204070 |
T |
|
| Q |
771 |
tccttttgataaggaatggttggatgatatcgaaaagcttgctttgtt |
818 |
Q |
| |
|
| |||||||||||| |||||||||| | |||||| || |||||||| |
|
|
| T |
26204069 |
tggttttgataaggattggttggatggtgtcgaaaggcgggctttgtt |
26204022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 103 - 272
Target Start/End: Original strand, 27920262 - 27920435
Alignment:
| Q |
103 |
accactcaagatgttgatgttgaaatctggcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggttttcttttcttaag---t |
199 |
Q |
| |
|
||||||||| ||||||||| | ||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||| || || ||||| |||| | |
|
|
| T |
27920262 |
accactcaatatgttgatgataaaatctggcaggaaactagtaacactaatgatgatcaaggtgaaaactctttggattagtgttgttttcataagcaat |
27920361 |
T |
|
| Q |
200 |
tacctcatcgcccttttcattttgaag-ttaaccttcttctttctcacctttt-ctcagtttctctaaatgatga |
272 |
Q |
| |
|
||||||||| |||||||||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
27920362 |
tacctcatc-accttttcattttgaagtttaactctcttctttcccaccttttggacagtttctctaaatgatga |
27920435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 573 - 818
Target Start/End: Complemental strand, 26109974 - 26109730
Alignment:
| Q |
573 |
ttgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtcta |
672 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| | | | ||| |||||||| | |||| |||||||||||| ||||||||| | ||| |
|
|
| T |
26109974 |
ttgtctttgttgactgatttctttgttaagcatccttctgtccgtttaaaagacacttcacttagtaatagatacaagggttg-tgcctacaatttacta |
26109876 |
T |
|
| Q |
673 |
gccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttc |
772 |
Q |
| |
|
|| || |||||||||||||| |||| |||| | | ||||| | ||||| ||| ||||||||||||||| |||||||||||||||| | ||| ||| |
|
|
| T |
26109875 |
gctgaactattgaaattcctcaaaacccataatatattggaagaattaggatcataccactctgaatttatggagttattacaagatgcgcacagctttg |
26109776 |
T |
|
| Q |
773 |
cttttgataaggaatggttggatgatatcgaaaagcttgctttgtt |
818 |
Q |
| |
|
|||||||||||| |||||||||| | |||||| || |||||||| |
|
|
| T |
26109775 |
gttttgataaggattggttggatggtgtcgaaaggcgggctttgtt |
26109730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 27776525 - 27776634
Alignment:
| Q |
86 |
ccataacaaagcctctaaccactcaagatgttgatgttgaaatctggcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggtt |
185 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||| || ||||||||||||||| |||||||| ||| ||||||| | |||||||||| || |
|
|
| T |
27776525 |
ccataacaaagcctcctactactcaagatgttgatgttgaaaacttgcaggaaactagtaagactaatgatcatcaaggtgaaaactctttggatcaatt |
27776624 |
T |
|
| Q |
186 |
ttcttttctt |
195 |
Q |
| |
|
|| ||||||| |
|
|
| T |
27776625 |
ttattttctt |
27776634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 466 - 805
Target Start/End: Complemental strand, 26232422 - 26232087
Alignment:
| Q |
466 |
tcatctcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctat |
565 |
Q |
| |
|
|||| |||| ||| |||| ||||| || |||||||||||||| ||||| |||||| ||| ||||||||| | || || |||||||||||||| | | |
|
|
| T |
26232422 |
tcatttcagaggacccttgtcaaaaagtagaagatttaagttc--cttgc-ttgtcaaaagtgagcttgagcaactggtctccaagaatcatttggattg |
26232326 |
T |
|
| Q |
566 |
tgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaa |
665 |
Q |
| |
|
| ||| || | |||||||| ||||||| |||||||| ||||||| | | | ||| |||||||| | |||| |||||||||||| ||||||||| |
|
|
| T |
26232325 |
ggggaatttttatttgttgaatgatttctttgttaagaatccttctgtccgtttaaaagacacttcacttagtaatagatacaagggttg-tgcctacaa |
26232227 |
T |
|
| Q |
666 |
ctgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgc |
765 |
Q |
| |
|
| |||| || ||| |||||||||| ||||||||||||||||||| || || || ||| ||||||||||||| |||||||||||||||| ||| |
|
|
| T |
26232226 |
tttattagctgaactactgaaattcctcaaaactcatagtgtgttggaagtattgggctcattccactctgaatttgaggagttattacaagatgcacga |
26232127 |
T |
|
| Q |
766 |
agttttccttttgataaggaatggttggatgatatcgaaa |
805 |
Q |
| |
|
|| ||| |||||||||||| |||||||||| | |||||| |
|
|
| T |
26232126 |
aggtttggttttgataaggattggttggatggtgtcgaaa |
26232087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 495 - 795
Target Start/End: Original strand, 28136724 - 28137023
Alignment:
| Q |
495 |
gaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttcc |
594 |
Q |
| |
|
||||||||||||||||||| |||||| || ||||||||| | ||||| |||||||||||||| | | |||||| || ||| | ||||| | ||||| |
|
|
| T |
28136724 |
gaagatttaagttcttctttgtttgtcaagagtgagcttgagcaactagtctccaagaatcatttggattatgagaacttatctctattgacaggtttcc |
28136823 |
T |
|
| Q |
595 |
ttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttc |
694 |
Q |
| |
|
||||||| ||||||| ||| | ||| ||| |||| || ||| ||| |||||||| ||| ||||||| | || |||||||||||||||||| |
|
|
| T |
28136824 |
ttgttaaaaatccttctgttcgtttaaaagacaattcactgcgtaatagattcaagggttg-tgcttacaacttattggcagagctattgaaattccttg |
28136922 |
T |
|
| Q |
695 |
aaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttgga |
794 |
Q |
| |
|
||||||||||||| |||||||| ||||| ||| |||||||||||||| | || || ||| ||||| |||| ||| |||||||||||| |||||||| |
|
|
| T |
28136923 |
aaactcatagtgtcttggatgtattaggctcatgccactctgaatttgtggatctactactagatgcgcgcaactttggttttgataaggattggttgga |
28137022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 546 - 820
Target Start/End: Complemental strand, 26138885 - 26138612
Alignment:
| Q |
546 |
tccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttct-tctaaggcacacttcattgagtagccga |
644 |
Q |
| |
|
|||||||||||||| | | || ||| ||||||||||||||||||||| |||||||||||||||| | ||| | ||| |||||||| | |||| | |
|
|
| T |
26138885 |
tccaagaatcatttggattgtgggaatttgtctttgttgactgatttctttgttaagcatccttc-tatctgtttaaaagacacttcacttagtaataca |
26138787 |
T |
|
| Q |
645 |
tacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatc |
744 |
Q |
| |
|
|||||||||| |||||||||| ||||| | |||||||||||||| |||| |||||| | ||||| || || || || ||||||||||||| | |
|
|
| T |
26138786 |
tacaagggttg-tgcctacaacgtactagctaaactattgaaattcctcaaaacccatagtatattggaagtattgggcacattccactctgaatttgtg |
26138688 |
T |
|
| Q |
745 |
gagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttc |
820 |
Q |
| |
|
|||||||||||||||| ||| || ||| |||||||||||| |||||||||| | |||||| || |||||||||| |
|
|
| T |
26138687 |
gagttattacaagatgcacgaagctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgtttc |
26138612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 151 - 289
Target Start/End: Complemental strand, 28479937 - 28479797
Alignment:
| Q |
151 |
aatgacgatcgaggtgaagaatctttggatcggttttcttttcttaagttacctcatcgcccttttcattttgaag-ttaaccttcttctttctcacctt |
249 |
Q |
| |
|
||||| |||| ||||||||| |||||||||| |||| ||||||||| |||||||||| |||||| |||||||||| |||| |||||| || |||||| |
|
|
| T |
28479937 |
aatgatgatcaaggtgaagactctttggatcaattttattttcttaatttacctcatcaccctttgcattttgaagtttaattctcttctctcacacctt |
28479838 |
T |
|
| Q |
250 |
tt-ctcagtttctctaaatgatgacgatgtcatgaaagtaa |
289 |
Q |
| |
|
|| |||||||||| |||||||||| |||||| ||||||| |
|
|
| T |
28479837 |
ttgctcagtttctgtaaatgatgattctgtcataaaagtaa |
28479797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 151 - 289
Target Start/End: Complemental strand, 28509120 - 28508980
Alignment:
| Q |
151 |
aatgacgatcgaggtgaagaatctttggatcggttttcttttcttaagttacctcatcgcccttttcattttgaag-ttaaccttcttctttctcacctt |
249 |
Q |
| |
|
||||| |||| ||||||||| |||||||||| |||| ||||||||| |||||||||| |||||| |||||||||| |||| |||||| || |||||| |
|
|
| T |
28509120 |
aatgatgatcaaggtgaagactctttggatcaattttattttcttaatttacctcatcaccctttgcattttgaagtttaattctcttctctcacacctt |
28509021 |
T |
|
| Q |
250 |
tt-ctcagtttctctaaatgatgacgatgtcatgaaagtaa |
289 |
Q |
| |
|
|| |||||||||| |||||||||| |||||| ||||||| |
|
|
| T |
28509020 |
ttgctcagtttctgtaaatgatgattctgtcataaaagtaa |
28508980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 578 - 805
Target Start/End: Complemental strand, 26126746 - 26126520
Alignment:
| Q |
578 |
tttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctagccga |
677 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||| | | | ||| |||||||| | |||| |||||||||||| ||| ||||| | ||||| || |
|
|
| T |
26126746 |
tttgttgaatgatttctttgttaagcatccttctgtccgtttaaaagacacttcacttagtaatagatacaagggttg-tgcttacaatttactagctga |
26126648 |
T |
|
| Q |
678 |
gctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttcctttt |
777 |
Q |
| |
|
|| |||||||| || |||| || ||||||||||| || || || ||| ||||||||||||| |||||||||||||||| ||| || ||| |||| |
|
|
| T |
26126647 |
actgttgaaatttctcaaaacccacagtgtgttggaagtattggggtcattccactctgaatttgaggagttattacaagatgcacgaaggtttggtttt |
26126548 |
T |
|
| Q |
778 |
gataaggaatggttggatgatatcgaaa |
805 |
Q |
| |
|
|||||||| |||||||||| | |||||| |
|
|
| T |
26126547 |
gataaggattggttggatggtgtcgaaa |
26126520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 682 - 805
Target Start/End: Complemental strand, 26176694 - 26176571
Alignment:
| Q |
682 |
ttgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttccttttgata |
781 |
Q |
| |
|
||||||||||| |||| || ||||||||||| || || || ||| ||||||||||||| |||||||||||||||| ||| || ||| |||||||| |
|
|
| T |
26176694 |
ttgaaattcctcaaaacccacagtgtgttggaagtattgggctcattccactctgaatttgaggagttattacaagatgcacgaaggtttggttttgata |
26176595 |
T |
|
| Q |
782 |
aggaatggttggatgatatcgaaa |
805 |
Q |
| |
|
|||| |||||||||| | |||||| |
|
|
| T |
26176594 |
aggattggttggatggtgtcgaaa |
26176571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 28151326 - 28151364
Alignment:
| Q |
12 |
acaatattgacaggttagcgaaataagtgttgaagaagg |
50 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28151326 |
acaatattgacaggttagcgaaataagtgttgaagaagg |
28151364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 26139185 - 26139089
Alignment:
| Q |
258 |
ttctctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaacagtttcccaaggaagatgaaatattagtttccaaatcaagaccctct |
354 |
Q |
| |
|
||||||||||||||| | ||| ||||||||| |||||||||||| |||||||||| | ||| ||||| ||| ||||||| ||||| | ||||||| |
|
|
| T |
26139185 |
ttctctaaatgatgattctttcaagaaagtaagctcaaatattgaggaacagtttcctatggatgatgatataatagtttctaaatctaaaccctct |
26139089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 28162792 - 28162891
Alignment:
| Q |
255 |
agtttctctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaacagtttcccaaggaagatgaaatattagtttccaaatcaagaccctct |
354 |
Q |
| |
|
|||||||| ||||||||| | | ||| ||||||||| |||||||||||| |||| ||||| ||| ||||| ||| ||||||||||||| | ||||||| |
|
|
| T |
28162792 |
agtttctcgaaatgatgatgctttcaagaaagtaagctcaaatattgaggaacaatttcctaagattgatgatataatagtttccaaatctaaaccctct |
28162891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 354
Target Start/End: Complemental strand, 26110303 - 26110202
Alignment:
| Q |
253 |
tcagtttctctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaacagtttcccaaggaagatgaaatattagtttccaaatcaagaccct |
352 |
Q |
| |
|
|||| |||||||||| |||| | ||| ||||||||| |||||||||||| |||| ||| | ||||| ||||| ||| ||||||||||||| | ||||| |
|
|
| T |
26110303 |
tcaggttctctaaatcatgattctttcaagaaagtaagctcaaatattgaggaacaattttctaaggatgatgatataatagtttccaaatctaaaccct |
26110204 |
T |
|
| Q |
353 |
ct |
354 |
Q |
| |
|
|| |
|
|
| T |
26110203 |
ct |
26110202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 26127383 - 26127278
Alignment:
| Q |
253 |
tcagtttctctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaacagtttcccaaggaagatgaaatattagtttccaaatcaagaccct |
352 |
Q |
| |
|
|||| |||||||||| |||| | ||| ||||||||| |||||||||||| |||| |||| ||||| ||| | ||| ||||||||||||| | ||||| |
|
|
| T |
26127383 |
tcaggttctctaaatcatgattctttcaagaaagtaagctcaaatattgaggaacaatttcataaggatgataatataatagtttccaaatctaaaccct |
26127284 |
T |
|
| Q |
353 |
cttcta |
358 |
Q |
| |
|
|||||| |
|
|
| T |
26127283 |
cttcta |
26127278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 28056547 - 28056612
Alignment:
| Q |
86 |
ccataacaaagcctctaaccactcaagatgttgatgttgaaatctggcaggaaactagtaacacta |
151 |
Q |
| |
|
||||||||| |||||| ||||||||||| ||| ||||| | | || |||||||||||||||||||| |
|
|
| T |
28056547 |
ccataacaaggcctcttaccactcaagaagttcatgttaataacttgcaggaaactagtaacacta |
28056612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 28066972 - 28067037
Alignment:
| Q |
86 |
ccataacaaagcctctaaccactcaagatgttgatgttgaaatctggcaggaaactagtaacacta |
151 |
Q |
| |
|
||||||||| |||||| ||||||||||| ||| ||||| | | || |||||||||||||||||||| |
|
|
| T |
28066972 |
ccataacaaggcctcttaccactcaagaagttcatgttaataacttgcaggaaactagtaacacta |
28067037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 18077027 - 18076983
Alignment:
| Q |
336 |
ttccaaatcaagaccctcttctattgaatctcagtgtccttcaaa |
380 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||| ||||||||| |
|
|
| T |
18077027 |
ttccaaatcacgaccctcttctattgcatctcagtttccttcaaa |
18076983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 26177433 - 26177328
Alignment:
| Q |
253 |
tcagtttctctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaacagtttcccaaggaagatgaaatattagtttccaaatcaagaccct |
352 |
Q |
| |
|
|||| |||||||||| |||| | ||| ||||||||| |||| ||||||| |||| |||| ||||| ||| | ||| ||||||||||||| | ||||| |
|
|
| T |
26177433 |
tcaggttctctaaatcatgattctttcaagaaagtaagctcaattattgaggaacaatttcataaggatgataatataatagtttccaaatctaaaccct |
26177334 |
T |
|
| Q |
353 |
cttcta |
358 |
Q |
| |
|
|||||| |
|
|
| T |
26177333 |
cttcta |
26177328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0922 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: scaffold0922
Description:
Target: scaffold0922; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 162 - 879
Target Start/End: Original strand, 1819 - 2526
Alignment:
| Q |
162 |
aggtgaagaatctttggatcggttttcttttcttaagttacctcatcgcccttttcattttgaagttaaccttcttctttctcaccttttct-cagtttc |
260 |
Q |
| |
|
||||||||| | ||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||| || ||| |||| ||| |||| | |||||| |
|
|
| T |
1819 |
aggtgaagagtatttcaatcggttttattttcttaagttaccacatcacccttttcattttgaagtttgact-cttatttcccacattttgttcagtttt |
1917 |
T |
|
| Q |
261 |
tctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaacagtttcccaaggaagatgaaatattagtttccaaatcaagaccctcttctatt |
360 |
Q |
| |
|
| |||||||||| | | ||||||||||||| ||| |||||||| | || |||| ||||| ||||||||||||||||||||||||| | || | ||||| |
|
|
| T |
1918 |
tttaaatgatgatgctatcatgaaagtaagctcagatattgaggatcaatttcttaaggatgatgaaatattagtttccaaatcaaagctctgtactatt |
2017 |
T |
|
| Q |
361 |
gaatctcagtgtccttcaaagtctactcaaggtattttattgcatcannnnnnnna-aattaattttctagtgctcaaatatgcataaacattatttcat |
459 |
Q |
| |
|
| ||||||||||||||||||| || |||||||||||||||||| ||| |||||||||||| ||||| |||||||||||| |||||| | | |
|
|
| T |
2018 |
gtatctcagtgtccttcaaagcctgctcaaggtattttattgcttcattttagttttaattaattttcttgtgctaaaatatgcataattattattacct |
2117 |
T |
|
| Q |
460 |
gtactctcatctcaggggaaccttctcaaagagatgaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcattt |
559 |
Q |
| |
|
|||| ||| || || |||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||| ||||| |||| |
|
|
| T |
2118 |
atactttca-----ggtgacccttctcaaagagatgaagatttaagttattcttgggttgtcacaaaggagctacggaatctagtttccgagaattattt |
2212 |
T |
|
| Q |
560 |
agctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgc |
659 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||| | ||| |||||||| |||| |
|
|
| T |
2213 |
ggctattgagaacttgtctttgttgactgatttcctagttaagaatccttca---gttctaagggacacttcattgagtaacagattcaagggtt-atgc |
2308 |
T |
|
| Q |
660 |
ctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagat |
759 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||||| | ||| ||||||||||| |
|
|
| T |
2309 |
ctacaactgtctagctgagctattgaaattcctccaaaagcattacctgttggatgtgttaggttcaagccattctgaatttgttgagctattacaagat |
2408 |
T |
|
| Q |
760 |
gtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatgggttcgcaagtctctcaagatgcatttgcaaaaatt |
859 |
Q |
| |
|
| || || |||||||||||||| ||||||||||||| | | |||||||| || ||||||| | |||| |||||||||||| |||| ||||||| || |
|
|
| T |
2409 |
atgcgtagatttccttttgataaagaatggttggatggtgttgaaaagctcgccttgtttcct-ggtttacaagtctctcaaaatgc-gctgcaaaattt |
2506 |
T |
|
| Q |
860 |
gttggactcaaaacacattt |
879 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
2507 |
tttggactcaaaacacattt |
2526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257 (Bit Score: 172; Significance: 6e-92; HSPs: 2)
Name: scaffold0257
Description:
Target: scaffold0257; HSP #1
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 495 - 909
Target Start/End: Original strand, 19507 - 19919
Alignment:
| Q |
495 |
gaagatttaagttcttcttgcattgtcacaagggagcttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttcc |
594 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||||| | ||| | |||||||| ||||| | | |||||| |||||||||||||||||||| |
|
|
| T |
19507 |
gaagatttaagttcttcttcgcttgtcaagagggagcttgagcaactactctccaagaagcatttggattatgagaacatgtctttgttgactgatttct |
19606 |
T |
|
| Q |
595 |
ttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttc |
694 |
Q |
| |
|
||||||| |||||||| ||| | | | | ||||||||||||||| | |||||||||||| |||||||||| || ||||| ||||||||||||||||| | |
|
|
| T |
19607 |
ttgttaaacatccttctgttcgtttgaaggacacttcattgagtaacagatacaagggtt-atgcctacaattgcctagctgagctattgaaattcctcc |
19705 |
T |
|
| Q |
695 |
aaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttgga |
794 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||| |||| | | |||||||||| |||||||||| |
|
|
| T |
19706 |
aaactcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttactacaagatgtgcgcaaatgtggttttgataagaaatggttgga |
19805 |
T |
|
| Q |
795 |
tgatatcgaaaagcttgctttgtttcatgggttcgcaagtctctcaagatgcatttgcaaaaattgttggactcaaaacacat-ttgacacacgtggtga |
893 |
Q |
| |
|
|||| | ||||||| |||||||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||| |
|
|
| T |
19806 |
tgatgtggaaaagcgcgctttgtttcct-ggttcacaagtctctcaagatgca-ttgcaaaaattgttggactcaaaacacatcttgacgcaacatgtga |
19903 |
T |
|
| Q |
894 |
agtatcttaagcatca |
909 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
19904 |
aggatcttaagcatca |
19919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 85 - 281
Target Start/End: Original strand, 19079 - 19277
Alignment:
| Q |
85 |
gccataacaaagcctctaaccactcaagatgttgatgttgaaatctggcaggaaactagtaacactaatgacgatcgaggtgaagaatctttggatcggt |
184 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| | | || ||||||||||||||||| || ||| |||| ||||||||| |||||||||| | |
|
|
| T |
19079 |
gccataacaaagcctcttaccactcaagatgttgatgttaataacttgcaggaaactagtaacattattgatgatcaaggtgaagactctttggatcaat |
19178 |
T |
|
| Q |
185 |
tttcttttcttaagttacctcatcgcccttttcattttg-aagttaaccttcttctttctcacctttt-ctcagtttctctaaatgatgacgatgtcat |
281 |
Q |
| |
|
|| |||||||||||||||||||| |||||||||||||| || ||||| |||||| || |||||||| ||||||||||||||||| |||| |||||| |
|
|
| T |
19179 |
attattttcttaagttacctcatcacccttttcattttgaaatttaactctcttctctcacaccttttgttcagtttctctaaatgacgacgttgtcat |
19277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 657 - 795
Target Start/End: Complemental strand, 8692582 - 8692444
Alignment:
| Q |
657 |
tgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaa |
756 |
Q |
| |
|
||||||||||| || || |||||||||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||||| | ||| || ||| | |
|
|
| T |
8692582 |
tgcctacaacttactggctgagctattgaaattccttgaaactcatagtgtcttggatgtattaggttcatgccactctgaatttgtggagctactacta |
8692483 |
T |
|
| Q |
757 |
gatgtacgcagttttccttttgataaggaatggttggat |
795 |
Q |
| |
|
|||| |||| ||| |||||||||||| ||||||||| |
|
|
| T |
8692482 |
gatgcgcgcaactttggttttgataaggattggttggat |
8692444 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1142 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1142
Description:
Target: scaffold1142; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 344
Target Start/End: Original strand, 530 - 621
Alignment:
| Q |
253 |
tcagtttctctaaatgatgacgatgtcatgaaagtaagatcaaatattgagcaacagtttcccaaggaagatgaaatattagtttccaaatc |
344 |
Q |
| |
|
|||||| |||||||||| || | ||||||||||||||| | |||||||||| |||||||||| ||||| ||||||||| || ||||| |||| |
|
|
| T |
530 |
tcagttcctctaaatgacgatgttgtcatgaaagtaagcttaaatattgaggaacagtttcctaaggatgatgaaataataatttcccaatc |
621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1147 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1147
Description:
Target: scaffold1147; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 705 - 879
Target Start/End: Original strand, 888 - 1060
Alignment:
| Q |
705 |
tgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaa |
804 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||| | |||||| | |||||||| | || ||| ||||||| ||||| |||| |||| | ||||| |
|
|
| T |
888 |
tgtgttggatgtgttaggttcaagcaactctaaattggttgagttaatccaagatgtgcacatatttgcttttgacaaggatcggttagatggtgtcgaa |
987 |
T |
|
| Q |
805 |
aagcttgctttgtttcatgggttcgcaagtctctcaagatgcatttgcaaaaattgttggactcaaaacacattt |
879 |
Q |
| |
|
|| | ||||||||| | ||| |||||||||| |||| || ||||||||||||||||||| ||||||||||| |
|
|
| T |
988 |
aaacacactttgtttcct-agtttacaagtctctctagataca-ttgcaaaaattgttggacttaaaacacattt |
1060 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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