View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3049_low_32 (Length: 232)
Name: NF3049_low_32
Description: NF3049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3049_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 2615449 - 2615655
Alignment:
| Q |
13 |
attatacttggtcacttattttatctttatattcagtaaacatgtaattaagtaaatatgttataatatctttcgatttcttttacctaatgacttaata |
112 |
Q |
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| T |
2615449 |
attatacttagtcacttattttatctttatattcagtaaacatgtaattaagtaaatatgttctaatatctttcgatttcttttacctaatgacttaata |
2615548 |
T |
|
| Q |
113 |
atatgatgttagaagagttggtaatgtggctctcgtggagaaagaattcatgtttgattccaagagctggtcatttgaggaacaatccaatttcatgtgt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2615549 |
atatgatgttagaagagttggtaatgtggctctcgtggagaaagaattcatgtttgattccaagagctggtcatttgaggaacaatccaatttcatgtgt |
2615648 |
T |
|
| Q |
213 |
aaaaaat |
219 |
Q |
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||||||| |
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| T |
2615649 |
aaaaaat |
2615655 |
T |
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