View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3049_low_7 (Length: 460)

Name: NF3049_low_7
Description: NF3049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3049_low_7
NF3049_low_7
[»] chr1 (55 HSPs)
chr1 (292-460)||(50680594-50680762)
chr1 (34-192)||(50680335-50680493)
chr1 (30-192)||(11436041-11436204)
chr1 (30-187)||(11437143-11437301)
chr1 (43-192)||(37526817-37526965)
chr1 (31-181)||(39222423-39222575)
chr1 (30-192)||(24422799-24422962)
chr1 (30-192)||(36612852-36613014)
chr1 (30-192)||(43059945-43060108)
chr1 (34-171)||(24426035-24426173)
chr1 (31-192)||(36613843-36614005)
chr1 (31-192)||(45148581-45148741)
chr1 (31-160)||(51684366-51684496)
chr1 (30-186)||(52274967-52275124)
chr1 (34-192)||(39153056-39153214)
chr1 (30-160)||(45157180-45157310)
chr1 (49-170)||(43058804-43058925)
chr1 (30-182)||(51685714-51685867)
chr1 (34-192)||(39151934-39152092)
chr1 (34-160)||(45149941-45150068)
chr1 (31-160)||(39699738-39699867)
chr1 (30-192)||(35594216-35594377)
chr1 (31-186)||(50681553-50681705)
chr1 (58-192)||(25652742-25652876)
chr1 (34-171)||(52276123-52276261)
chr1 (30-192)||(23980414-23980568)
chr1 (30-192)||(52827346-52827509)
chr1 (30-160)||(39698562-39698692)
chr1 (118-192)||(39221402-39221476)
chr1 (34-192)||(43378652-43378810)
chr1 (30-160)||(35595163-35595295)
chr1 (34-160)||(7983053-7983179)
chr1 (30-171)||(41366091-41366232)
chr1 (31-192)||(41364829-41364990)
chr1 (43-160)||(45156062-45156179)
chr1 (30-161)||(35066972-35067104)
chr1 (30-160)||(44404441-44404572)
chr1 (30-139)||(7675451-7675560)
chr1 (30-106)||(14999284-14999360)
chr1 (54-157)||(33088091-33088194)
chr1 (34-192)||(52828009-52828168)
chr1 (54-160)||(46066547-46066652)
chr1 (30-132)||(33088616-33088719)
chr1 (53-160)||(40384748-40384855)
chr1 (92-162)||(30248174-30248243)
chr1 (30-106)||(7674527-7674602)
chr1 (30-130)||(16290092-16290194)
chr1 (65-160)||(44411937-44412032)
chr1 (31-159)||(33739094-33739222)
chr1 (30-132)||(12389981-12390083)
chr1 (92-171)||(30249450-30249529)
chr1 (99-160)||(2940334-2940395)
chr1 (151-180)||(7674596-7674625)
chr1 (43-160)||(43377733-43377850)
chr1 (35-83)||(7987905-7987952)
[»] scaffold0320 (2 HSPs)
scaffold0320 (30-192)||(19487-19650)
scaffold0320 (292-460)||(19741-19899)
[»] chr8 (53 HSPs)
chr8 (30-192)||(10007702-10007865)
chr8 (31-192)||(10006344-10006506)
chr8 (36-192)||(1824017-1824174)
chr8 (36-192)||(1858462-1858619)
chr8 (30-175)||(5513981-5514126)
chr8 (30-186)||(1823551-1823709)
chr8 (30-186)||(1857996-1858154)
chr8 (30-160)||(24122882-24123012)
chr8 (30-192)||(30335638-30335801)
chr8 (30-171)||(22221324-22221466)
chr8 (30-171)||(22227666-22227808)
chr8 (34-160)||(29968308-29968434)
chr8 (48-160)||(24123869-24123981)
chr8 (34-160)||(8389660-8389787)
chr8 (30-160)||(12353332-12353461)
chr8 (32-160)||(18979091-18979220)
chr8 (31-159)||(22220388-22220517)
chr8 (34-160)||(40471118-40471244)
chr8 (31-160)||(11283180-11283310)
chr8 (43-160)||(18978033-18978149)
chr8 (30-154)||(32207302-32207425)
chr8 (30-160)||(12351920-12352051)
chr8 (30-160)||(8388463-8388592)
chr8 (43-160)||(18970924-18971040)
chr8 (31-182)||(23169940-23170098)
chr8 (31-160)||(30336472-30336602)
chr8 (100-180)||(11456679-11456759)
chr8 (33-192)||(43661267-43661427)
chr8 (30-160)||(30568886-30569016)
chr8 (34-160)||(11282011-11282138)
chr8 (92-168)||(34625163-34625239)
chr8 (34-160)||(11287779-11287906)
chr8 (30-192)||(43661762-43661925)
chr8 (43-160)||(29043411-29043528)
chr8 (294-353)||(29043757-29043817)
chr8 (47-132)||(24488679-24488763)
chr8 (92-192)||(18488202-18488301)
chr8 (30-160)||(45114488-45114618)
chr8 (35-161)||(45112875-45113000)
chr8 (30-122)||(5003107-5003198)
chr8 (30-162)||(32968455-32968588)
chr8 (31-83)||(3819489-3819541)
chr8 (92-160)||(30570227-30570295)
chr8 (31-162)||(32973905-32974037)
chr8 (49-160)||(2379895-2380004)
chr8 (145-187)||(5514223-5514266)
chr8 (31-81)||(36249552-36249603)
chr8 (30-132)||(38980043-38980146)
chr8 (30-132)||(39011140-39011243)
chr8 (30-159)||(17844277-17844403)
chr8 (31-132)||(38974795-38974897)
chr8 (31-132)||(39005893-39005995)
chr8 (31-83)||(24483143-24483196)
[»] chr5 (39 HSPs)
chr5 (30-192)||(18486841-18487004)
chr5 (30-192)||(19752911-19753073)
chr5 (30-180)||(25523068-25523219)
chr5 (30-192)||(19754069-19754233)
chr5 (31-187)||(22940567-22940723)
chr5 (30-192)||(18485137-18485307)
chr5 (30-160)||(28538675-28538806)
chr5 (30-159)||(16650827-16650957)
chr5 (34-192)||(24332916-24333074)
chr5 (71-192)||(25524037-25524158)
chr5 (30-160)||(36486459-36486590)
chr5 (34-160)||(28539791-28539917)
chr5 (34-160)||(42195137-42195262)
chr5 (54-186)||(2686346-2686478)
chr5 (33-160)||(36485302-36485430)
chr5 (30-192)||(33160227-33160388)
chr5 (30-160)||(42196171-42196302)
chr5 (30-192)||(5778775-5778938)
chr5 (30-160)||(40255643-40255774)
chr5 (34-160)||(2186774-2186900)
chr5 (30-159)||(25055411-25055541)
chr5 (59-171)||(5730822-5730934)
chr5 (85-160)||(16650047-16650122)
chr5 (31-132)||(1796054-1796156)
chr5 (30-148)||(5777900-5778017)
chr5 (30-152)||(21835040-21835162)
chr5 (31-122)||(25056390-25056482)
chr5 (47-122)||(7311607-7311682)
chr5 (30-160)||(1797268-1797398)
chr5 (31-106)||(20214196-20214271)
chr5 (43-192)||(1015497-1015645)
chr5 (49-106)||(18154513-18154569)
chr5 (30-106)||(33158097-33158174)
chr5 (100-148)||(5961476-5961524)
chr5 (34-132)||(20216762-20216861)
chr5 (30-105)||(5730440-5730517)
chr5 (30-106)||(25524152-25524230)
chr5 (54-104)||(34893689-34893739)
chr5 (49-106)||(2685763-2685820)
[»] chr7 (38 HSPs)
chr7 (31-187)||(18371424-18371581)
chr7 (30-186)||(7500454-7500610)
chr7 (30-192)||(7501791-7501954)
chr7 (30-180)||(22629482-22629636)
chr7 (30-192)||(22630391-22630554)
chr7 (43-180)||(18372408-18372544)
chr7 (31-192)||(31659622-31659785)
chr7 (54-192)||(47369805-47369943)
chr7 (30-192)||(3227533-3227696)
chr7 (34-160)||(42886257-42886384)
chr7 (33-186)||(46482599-46482753)
chr7 (33-192)||(17781663-17781823)
chr7 (30-169)||(30439320-30439459)
chr7 (30-192)||(31949321-31949484)
chr7 (30-171)||(31949762-31949904)
chr7 (31-192)||(47525306-47525468)
chr7 (30-171)||(127336-127476)
chr7 (32-192)||(3227109-3227269)
chr7 (36-160)||(14999126-14999249)
chr7 (30-171)||(31660970-31661111)
chr7 (30-158)||(21505415-21505542)
chr7 (30-131)||(11658378-11658480)
chr7 (30-122)||(17782562-17782655)
chr7 (54-178)||(43900442-43900565)
chr7 (34-132)||(11662550-11662649)
chr7 (98-157)||(14998048-14998107)
chr7 (31-160)||(769413-769543)
chr7 (101-160)||(770732-770791)
chr7 (54-192)||(6618231-6618369)
chr7 (30-104)||(34174010-34174084)
chr7 (31-132)||(48934902-48935004)
chr7 (30-102)||(20163585-20163658)
chr7 (43-104)||(47524538-47524599)
chr7 (30-82)||(21508453-21508504)
chr7 (34-160)||(128572-128699)
chr7 (30-122)||(34351496-34351584)
chr7 (30-160)||(34352757-34352888)
chr7 (30-106)||(597309-597382)
[»] chr4 (49 HSPs)
chr4 (30-192)||(1290137-1290300)
chr4 (34-192)||(12129626-12129785)
chr4 (34-192)||(8155741-8155899)
chr4 (30-192)||(1835041-1835204)
chr4 (33-160)||(19750546-19750673)
chr4 (33-160)||(19789133-19789260)
chr4 (30-160)||(31599788-31599919)
chr4 (30-192)||(13509298-13509460)
chr4 (43-187)||(1289110-1289254)
chr4 (31-160)||(1834119-1834250)
chr4 (30-160)||(8757674-8757804)
chr4 (31-192)||(10471327-10471489)
chr4 (30-160)||(49307999-49308128)
chr4 (43-159)||(8758809-8758925)
chr4 (30-132)||(1963195-1963298)
chr4 (31-192)||(10447006-10447168)
chr4 (30-192)||(25685761-25685924)
chr4 (30-160)||(52491578-52491709)
chr4 (30-192)||(17382992-17383154)
chr4 (30-192)||(17388150-17388312)
chr4 (31-160)||(31600956-31601086)
chr4 (30-192)||(10448200-10448362)
chr4 (30-160)||(10470545-10470676)
chr4 (34-160)||(35935504-35935631)
chr4 (30-160)||(5525359-5525489)
chr4 (30-192)||(5526065-5526227)
chr4 (31-160)||(25684934-25685064)
chr4 (30-160)||(13386503-13386635)
chr4 (31-132)||(1964440-1964542)
chr4 (30-192)||(26421562-26421723)
chr4 (30-192)||(13386013-13386178)
chr4 (34-114)||(55602379-55602459)
chr4 (58-157)||(33296251-33296350)
chr4 (34-181)||(35934347-35934492)
chr4 (30-148)||(48780247-48780366)
chr4 (43-137)||(21539065-21539159)
chr4 (34-160)||(37728536-37728662)
chr4 (30-161)||(14868889-14869019)
chr4 (30-161)||(14876915-14877045)
chr4 (30-161)||(21177996-21178127)
chr4 (31-160)||(50909643-50909774)
chr4 (30-162)||(3928827-3928960)
chr4 (39-160)||(46638696-46638817)
chr4 (92-187)||(2412863-2412958)
chr4 (39-126)||(26420324-26420410)
chr4 (30-162)||(3927665-3927798)
chr4 (30-106)||(49306774-49306850)
chr4 (34-131)||(27257960-27258057)
chr4 (30-170)||(48781007-48781147)
[»] chr3 (63 HSPs)
chr3 (30-192)||(12700174-12700335)
chr3 (30-187)||(7758401-7758559)
chr3 (31-192)||(47614185-47614347)
chr3 (30-160)||(54540761-54540892)
chr3 (30-192)||(19984848-19985010)
chr3 (49-192)||(34019084-34019227)
chr3 (30-192)||(8875905-8876068)
chr3 (31-159)||(46719941-46720070)
chr3 (34-160)||(7267647-7267773)
chr3 (30-192)||(12703439-12703601)
chr3 (30-159)||(55191967-55192096)
chr3 (34-192)||(23770346-23770505)
chr3 (30-192)||(19986010-19986174)
chr3 (32-192)||(8456479-8456639)
chr3 (100-192)||(47615516-47615608)
chr3 (30-173)||(11671299-11671442)
chr3 (43-192)||(11670397-11670546)
chr3 (30-173)||(29931225-29931369)
chr3 (30-173)||(29980379-29980523)
chr3 (30-161)||(54539754-54539886)
chr3 (30-160)||(46721191-46721322)
chr3 (31-192)||(51469972-51470134)
chr3 (30-192)||(47609696-47609859)
chr3 (34-160)||(7268798-7268924)
chr3 (292-354)||(34018923-34018985)
chr3 (54-189)||(6249633-6249767)
chr3 (57-160)||(31645000-31645103)
chr3 (292-355)||(34018793-34018856)
chr3 (34-192)||(47610519-47610678)
chr3 (30-161)||(534498-534630)
chr3 (30-133)||(24516459-24516563)
chr3 (30-132)||(22776811-22776914)
chr3 (30-132)||(29932698-29932800)
chr3 (30-132)||(29981852-29981954)
chr3 (31-132)||(51037536-51037637)
chr3 (34-192)||(40426717-40426877)
chr3 (30-161)||(5029653-5029784)
chr3 (30-88)||(47615591-47615650)
chr3 (34-184)||(51347271-51347422)
chr3 (31-181)||(52840554-52840705)
chr3 (30-171)||(51470415-51470556)
chr3 (31-122)||(535791-535883)
chr3 (53-160)||(4271463-4271570)
chr3 (31-160)||(49216247-49216377)
chr3 (30-132)||(51038789-51038892)
chr3 (91-161)||(784917-784987)
chr3 (34-160)||(54986978-54987103)
chr3 (30-106)||(53614818-53614895)
chr3 (73-189)||(6250520-6250634)
chr3 (144-187)||(17776795-17776838)
chr3 (144-187)||(19078096-19078139)
chr3 (30-160)||(23769856-23769986)
chr3 (30-160)||(52839036-52839167)
chr3 (110-187)||(46492961-46493038)
chr3 (30-105)||(5001199-5001275)
chr3 (73-192)||(6171183-6171299)
chr3 (298-341)||(17776613-17776656)
chr3 (298-341)||(19077914-19077957)
chr3 (30-132)||(28262192-28262294)
chr3 (54-107)||(6170296-6170349)
chr3 (30-132)||(18442629-18442733)
chr3 (30-132)||(19487703-19487807)
chr3 (152-192)||(8593085-8593125)
[»] chr6 (31 HSPs)
chr6 (30-192)||(7316233-7316396)
chr6 (31-192)||(7314880-7315041)
chr6 (30-192)||(17496792-17496960)
chr6 (49-160)||(1829574-1829685)
chr6 (30-159)||(16704469-16704599)
chr6 (30-147)||(10784591-10784710)
chr6 (54-160)||(26575025-26575131)
chr6 (30-122)||(14822359-14822452)
chr6 (30-192)||(8659264-8659427)
chr6 (30-160)||(27437827-27437958)
chr6 (30-160)||(6842254-6842385)
chr6 (30-160)||(26574618-26574748)
chr6 (30-161)||(27322038-27322169)
chr6 (34-160)||(5658759-5658886)
chr6 (30-157)||(6840193-6840319)
chr6 (50-160)||(26949156-26949263)
chr6 (43-161)||(10785883-10786000)
chr6 (30-160)||(14823546-14823678)
chr6 (30-192)||(3721611-3721774)
chr6 (31-147)||(16703570-16703684)
chr6 (30-160)||(8660175-8660305)
chr6 (30-148)||(8821872-8821991)
chr6 (34-171)||(34834539-34834677)
chr6 (32-192)||(12382650-12382811)
chr6 (92-192)||(3333464-3333564)
chr6 (31-148)||(8822776-8822894)
chr6 (55-131)||(12350823-12350898)
chr6 (73-152)||(3333005-3333084)
chr6 (30-105)||(3722533-3722609)
chr6 (30-82)||(27447962-27448015)
chr6 (33-88)||(26717127-26717183)
[»] chr2 (43 HSPs)
chr2 (30-171)||(11258771-11258913)
chr2 (32-192)||(13030293-13030451)
chr2 (30-192)||(22848190-22848353)
chr2 (30-192)||(18905927-18906089)
chr2 (31-160)||(18299373-18299503)
chr2 (30-168)||(18904366-18904505)
chr2 (30-160)||(38840464-38840595)
chr2 (30-160)||(7899853-7899984)
chr2 (30-155)||(23869511-23869636)
chr2 (30-192)||(18797245-18797409)
chr2 (30-156)||(22587929-22588055)
chr2 (30-160)||(36449777-36449908)
chr2 (54-192)||(28617946-28618083)
chr2 (54-192)||(18869101-18869241)
chr2 (34-160)||(7898694-7898821)
chr2 (30-192)||(11257621-11257783)
chr2 (30-160)||(38839241-38839372)
chr2 (30-160)||(24475224-24475354)
chr2 (31-160)||(41878092-41878224)
chr2 (34-161)||(36450891-36451018)
chr2 (30-159)||(802563-802692)
chr2 (73-160)||(11996750-11996837)
chr2 (32-159)||(18300697-18300822)
chr2 (54-160)||(22587525-22587630)
chr2 (30-160)||(41879183-41879314)
chr2 (30-159)||(13570529-13570659)
chr2 (118-192)||(21837127-21837201)
chr2 (99-177)||(1410069-1410147)
chr2 (58-159)||(810753-810854)
chr2 (31-122)||(1034478-1034570)
chr2 (92-168)||(22067745-22067821)
chr2 (56-192)||(26545460-26545596)
chr2 (30-132)||(16446153-16446256)
chr2 (34-184)||(8534586-8534735)
chr2 (30-106)||(18868923-18869000)
chr2 (85-181)||(26544203-26544299)
chr2 (54-106)||(32739647-32739699)
chr2 (30-103)||(5819741-5819814)
chr2 (30-161)||(11938759-11938890)
chr2 (58-106)||(13568000-13568048)
chr2 (30-88)||(21837298-21837355)
chr2 (104-174)||(27552525-27552594)
chr2 (42-102)||(5362187-5362247)
[»] scaffold0632 (1 HSPs)
scaffold0632 (30-192)||(3248-3409)
[»] scaffold0019 (2 HSPs)
scaffold0019 (32-160)||(61430-61559)
scaffold0019 (31-160)||(60090-60220)
[»] scaffold1303 (1 HSPs)
scaffold1303 (30-160)||(1438-1569)
[»] scaffold2034 (1 HSPs)
scaffold2034 (31-160)||(233-363)
[»] scaffold0059 (2 HSPs)
scaffold0059 (54-192)||(3699-3836)
scaffold0059 (32-160)||(4701-4829)
[»] scaffold0302 (2 HSPs)
scaffold0302 (30-132)||(17469-17572)
scaffold0302 (31-160)||(18747-18877)
[»] scaffold0294 (2 HSPs)
scaffold0294 (30-160)||(5409-5540)
scaffold0294 (30-160)||(4441-4572)
[»] scaffold0003 (2 HSPs)
scaffold0003 (30-160)||(49404-49535)
scaffold0003 (30-82)||(39343-39396)
[»] scaffold0049 (2 HSPs)
scaffold0049 (93-192)||(7858-7957)
scaffold0049 (30-152)||(7394-7517)
[»] scaffold0045 (2 HSPs)
scaffold0045 (31-106)||(49109-49185)
scaffold0045 (55-160)||(48334-48436)
[»] scaffold0586 (2 HSPs)
scaffold0586 (34-148)||(6346-6461)
scaffold0586 (30-164)||(8994-9127)
[»] scaffold0186 (1 HSPs)
scaffold0186 (31-161)||(23081-23210)
[»] scaffold0093 (2 HSPs)
scaffold0093 (32-160)||(2436-2564)
scaffold0093 (32-160)||(7059-7187)
[»] scaffold0112 (1 HSPs)
scaffold0112 (31-170)||(37148-37287)
[»] scaffold0369 (1 HSPs)
scaffold0369 (30-171)||(13192-13332)
[»] scaffold0227 (1 HSPs)
scaffold0227 (31-132)||(118-220)


Alignment Details
Target: chr1 (Bit Score: 133; Significance: 6e-69; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 292 - 460
Target Start/End: Original strand, 50680594 - 50680762
Alignment:
Q  292 ctcttcttcatgttcatgtctatcttcatctcttccaatcaaacccaaacaaacaaaaattactagaacaaaggacattggtacatagaagcatgctaca 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |   ||||||||| ||||||||||||    
T  50680594 ctcttcttcatgttcatgtctatcttcatctcttccaatcaaacccaaacaaacaaaaattaccagaacaaagaagcatggtacatataagcatgctaca 50680693  T
Q  392 ccaattcatttcattattagtcataataatactctaaattgttttcccgaataaaaatcattctttctt 460  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  50680694 ccaattcatttcattcttagtcataataataccctaatttgttttcccgaataaaaatcattctttctt 50680762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 50680335 - 50680493
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||     
T  50680335 taaagtgcatttttcccccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagatttaacccctttgca 50680434  T
Q  134 tctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  50680435 tctttgatccttttggtcaattttgacttattcaacgcctacgtagcaggccacgtgtg 50680493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 11436041 - 11436204
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||   |||||||||||||||||||||| | ||||||||||||||||| |    
T  11436041 aggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagatttaacccat 11436140  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| | ||||||||||||||||||  | |||||||||| |||||| ||||||||||    
T  11436141 ttgcatctttggttcttttggtcaattttgaccgagtcaacgcctaagtggcatgccacatgtg 11436204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 30 - 187
Target Start/End: Complemental strand, 11437301 - 11437143
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||| |||||| ||||||||||||||| | ||||||||||||||||| |    
T  11437301 aggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagatttaaccctt 11437202  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccac 187  Q
    || | |||||||||||||||||||||||||||  | ||||||| || |||||| |||||    
T  11437201 ttacatctttgatccttttggtcaattttgaccgagtcaacgcttaagtggcatgccac 11437143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 43 - 192
Target Start/End: Complemental strand, 37526965 - 37526817
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 142  Q
    ||||||||||||||||||||||||||| |||||||||| || ||| |||| |||| |||||||| | ||||||||||||| ||||||||| |||||| ||    
T  37526965 ttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttgg-cccctaagatttagcccctttgcatctttggtc 37526867  T
Q  143 cttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
     ||||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  37526866 tttttgatcaattttgacttattcaacgcctacgtggtaggccacgtgtg 37526817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 39222575 - 39222423
Alignment:
Q  31 ggctaaagtgcatttt--ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    |||||||||||| |||  ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| || |||||||||  ||| |    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattttgcccat 39222476  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggca 181  Q
    |||| |||||| || |||||| |||||||||||||||||||||||||||||||    
T  39222475 ttgcatctttggtctttttgggcaattttgacttattcaacgcctacgtggca 39222423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 24422799 - 24422962
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||| | ||||||||||||| ||||     
T  24422799 aggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcccca 24422898  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||   ||||||||||||||||||||||||| || |||||||||  |||||| ||||| ||||    
T  24422899 ttgcaaatttgatccttttggtcaattttgacatagtcaacgcctgtgtggcatgccacgtgtg 24422962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 36612852 - 36613014
Alignment:
Q  30 aggctaaagtgcatttt-ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||||||  |  |||||| ||||||||||||||||  |||||||||||||  ||||    
T  36612852 aggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttggatct-taagtacaaaaactacaattttaaccccctaagatttagtccct 36612950  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| || |||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  36612951 ttgcatctttggtcattttggtcaattttaacttattcaacgcttacgtggcaggccacgtgtg 36613014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 43060108 - 43059945
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||| | ||| |||||| ||||||||||||| ||  ||||||| |||| |||||| |||||||||||||||   ||| ||||||||| | | |    
T  43060108 aggctaaagtgtactttaccccctctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagctcat 43060009  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43060008 ttgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 43059945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 24426173 - 24426035
Alignment:
Q  34 taaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| |||||||||| |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccccattgc 24426074  T
Q  133 ttctttgatccttttggtcaattttgacttattcaacgc 171  Q
       |||||| |||||||||||||||||| || |||||||    
T  24426073 aaatttgatacttttggtcaattttgacctagtcaacgc 24426035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 36614005 - 36613843
Alignment:
Q  31 ggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||||||| || ||| ||||||| ||||||||  |||||||||||| |||||| |||||||||||||||   ||||||||||||| || |||    
T  36614005 ggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaagatttagcctctt 36613906  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||  ||||  |||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  36613905 tgcaactttagtccttttgatcaattttgacttattcaacgcctacgtggcaggccacgtgtg 36613843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 45148581 - 45148741
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||| ||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||||   ||||||||||||||||||||    
T  45148581 ggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaagatttaacccctt 45148679  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||| |||||| ||||||||| ||||||||||    |||| |||||||||||| ||||||||||    
T  45148680 tgcatctttggtccttttggccaattttgac-cggtcaaagcctacgtggcatgccacatgtg 45148741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 51684366 - 51684496
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||||||||||||||||| ||||| || ||||||||||||| || ||||||||||||||||||| | ||||||||||||| ||||||    
T  51684366 ggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagatttagcccctt 51684465  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    ||| |||||| ||||||||| ||||||||||    
T  51684466 tgcatctttggtccttttggccaattttgac 51684496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 52274967 - 52275124
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||| ||||| |||||||||||||||| |||||||| |||| |||||| ||||||||||||||| | ||||||||||||| || |     
T  52274967 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagatttagcctca 52275066  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggcca 186  Q
    ||||   ||||||||||||||||||||||||| || ||||||||| ||||||| ||||    
T  52275067 ttgcaaatttgatccttttggtcaattttgacatagtcaacgcctgcgtggcatgcca 52275124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 39153214 - 39153056
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||| || ||| |||||||||||||||   || ||||||||||||||||||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 39153115  T
Q  133 ttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
     |||||| ||||||||||||||||||||  | |||| |||||||||||| ||||| ||||    
T  39153114 atctttggtccttttggtcaattttgac-cagtcaatgcctacgtggcatgccacgtgtg 39153056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 45157310 - 45157180
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||| || ||| |||||||||||||||   ||  ||||||||||||||||    
T  45157310 aggctaaagtgcactttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccctt 45157211  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    ||| |||||| ||||||||||||||||||||    
T  45157210 tgcatctttggtccttttggtcaattttgac 45157180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 49 - 170
Target Start/End: Original strand, 43058804 - 43058925
Alignment:
Q  49 ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttg 148  Q
    |||| ||||||| |||||||| |||||||| |||| |||||| ||||||||||||||||| || |||||||||| ||||||| | |||||||||||||||    
T  43058804 ccccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagcccctttacatctttgatccttttg 43058903  T
Q  149 gtcaattttgacttattcaacg 170  Q
    ||||||||||||||||| ||||    
T  43058904 gtcaattttgacttattgaacg 43058925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 182
Target Start/End: Complemental strand, 51685867 - 51685714
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| ||||||||||||| || | ||||||||||  || ||| |||||||||||||||   ||||||||||||| |||||    
T  51685867 aggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagcccct 51685768  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcag 182  Q
    |||| |||||| ||||||||| ||||||| ||  ||||||||||||||||||||    
T  51685767 ttgcatctttggtccttttggccaattttaaccaattcaacgcctacgtggcag 51685714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 39151934 - 39152092
Alignment:
Q  34 taaagtgcattttc-cccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    |||||||||||||  ||||||||| ||||||||||||  |||||||||||| || ||| |||||||||||||||    |  |||||||||||||||||||    
T  39151934 taaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttgactctttaagatttaacccctttgc 39152033  T
Q  133 ttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
     |||||| ||||||||||||||||||||  | |||| |||||||||||| ||||||||||    
T  39152034 atctttggtccttttggtcaattttgac-cagtcaatgcctacgtggcatgccacatgtg 39152092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 45150068 - 45149941
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt-agtcccctaagatttaacccctttgc 132  Q
    ||||||||| ||| ||||| |||||||||||||||| ||||||||||||| |||||| |||||| ||||||||    ||||||||||||| |||||||||    
T  45150068 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccctttgc 45149969  T
Q  133 ttctttgatccttttggtcaattttgac 160  Q
     |||||||||||||||| ||||||||||    
T  45149968 atctttgatccttttggccaattttgac 45149941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 39699867 - 39699738
Alignment:
Q  31 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 130  Q
    |||||||||||| ||| ||||| |||||||||| ||||| |||||||| |||| |||||| | ||||||||||||| | ||||||||||||| |||| ||    
T  39699867 ggctaaagtgcacttttcccccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagccccatt 39699768  T
Q  131 gcttctttgatccttttggtcaattttgac 160  Q
    ||  |||| |||||||||||||||||||||    
T  39699767 gcaactttaatccttttggtcaattttgac 39699738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 35594216 - 35594377
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| ||| |||||||||||||||| |||||||| |||| ||||||| |||||||||||||| | ||||||| ||||| |||||    
T  35594216 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgacccc-taagtattaaaactacaatttt-gacccctaaaatttagcccct 35594313  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| ||||||| | ||||||||||||  ||||||| ||  ||||| ||||| ||||    
T  35594314 ttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtg 35594377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 50681705 - 50681553
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||||||| ||||| |||||||||||| |||||||||| |  ||| ||||||||||||||| || |||||    |||||| || |||    
T  50681705 ggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaatattggtccc----gatttagcctctt 50681610  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggcca 186  Q
    ||| |||||| |||| ||| |||||||||| ||||||||||||||| ||||||||||    
T  50681609 tgcatctttggtcctattgatcaattttgatttattcaacgcctacatggcaggcca 50681553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 25652742 - 25652876
Alignment:
Q  58 tttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaatttt 157  Q
    |||||||||||| ||||||||  ||| |||||| ||||| || || ||| | || |||||||||| ||| ||||| |||||| || |||||| |||||||    
T  25652742 tttcaaaaacttgcaattttgatcccttaagtacaaaaattataaatttggcccgctaagatttagcccatttgcatctttggtcattttggccaatttt 25652841  T
Q  158 gacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||||||||||||||||||||||||||| |||||    
T  25652842 gacttattcaacgcctacgtggcaggccatatgtg 25652876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 52276261 - 52276123
Alignment:
Q  34 taaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| |||||||| | ||||||||||||| ||  |||||||||||| |||||| |||||||| || ||||||||||||||||||| |||| ||||    
T  52276261 taaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaactataaatttagtcccctaagatttagccccattgc 52276162  T
Q  133 ttctttgatccttttggtcaattttgacttattcaacgc 171  Q
       ||||||||||||| ||||||||||| || |||||||    
T  52276161 aaatttgatccttttgatcaattttgacctagtcaacgc 52276123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 23980568 - 23980414
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| ||||||| |||||||| |||||||||| || |||||| |||||||| |||||| ||| ||||||||||| |||||    
T  23980568 aggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttggtctcctaagatttagcccct 23980469  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |         |||||||||||||||| ||||||||||||||||| |||| |||| ||||    
T  23980468 ttgcat---------ttttggtcaattttgaattattcaacgcctacgtagcagaccacgtgtg 23980414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 52827346 - 52827509
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||||| |||| ||||||  ||||| ||||||| |  ||||||||||||| ||||     
T  52827346 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagcccca 52827445  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||  ||||| ||||||||  ||||||||||  | |||||||| |  ||||| ||||||||||    
T  52827446 ttgcaactttggtccttttgaccaattttgaccaagtcaacgccgatttggcatgccacatgtg 52827509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 39698562 - 39698692
Alignment:
Q  30 aggctaaagtgcatttt-ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||||||||||| |||||||| ||||||||||||| |||||| | |||||| |||||| | || |||||||||| || |     
T  39698562 aggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataatttt-ggccactaagatttagcctcg 39698660  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  |||| |||||||||||||||||||||    
T  39698661 ttgcaactttaatccttttggtcaattttgac 39698692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 39221402 - 39221476
Alignment:
Q  118 atttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  39221402 atttagcccctttgcatctttggtccttttggtcaattttgactaattcaacgcctacgtggcaggccacgtgtg 39221476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 43378810 - 43378652
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    ||||||||| ||| | | |||||||||||||||||| ||||||||  ||| |||||| ||||| |||||||||   | ||||||||||| | |||||||     
T  43378810 taaagtgcacttttctctcttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagcacctttgca 43378711  T
Q  134 tctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||| |||||||||||| ||||||||  | ||||||| || |||||| ||||| ||||    
T  43378710 tctttaatccttttggtcgattttgaccaagtcaacgcatatgtggcatgccacgtgtg 43378652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 35595295 - 35595163
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttc-caattttggccccataagtataaaaacta-caattttagtcccctaagatttaaccc 126  Q
    ||||||||||| | ||| |||||| ||||||| ||||||||  |||||||| |||| || |||||||||||| ||||||| | ||||||||||||| |||    
T  35595295 aggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttgg-cccctaagatttagccc 35595197  T
Q  127 ctttgcttctttgatccttttggtcaattttgac 160  Q
    |||||| |||||| ||||||||||||||||||||    
T  35595196 ctttgcatctttggtccttttggtcaattttgac 35595163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 7983053 - 7983179
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    ||||||||| ||| | ||| |||||||||| ||||| ||||||||||||| || |||| ||||| ||||||||   ||||||||||||| |||| ||||     
T  7983053 taaagtgcacttttctcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagatttatccccattgca 7983152  T
Q  134 tctttgatccttttggtcaattttgac 160  Q
      ||| |||||||||||||||||||||    
T  7983153 aatttcatccttttggtcaattttgac 7983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 41366232 - 41366091
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||| | |||||||||||||| | ||||||| ||||| ||||||| ||||| |||| ||||| ||||||||||||| ||||     
T  41366232 aggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaa-tttagccccctaagatttagcccca 41366134  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgc 171  Q
    ||||  ||||| ||||||||  || ||||||| || |||||||    
T  41366133 ttgcaactttggtccttttgaccacttttgacctagtcaacgc 41366091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 41364829 - 41364990
Alignment:
Q  31 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 130  Q
    |||||||||||| ||| | ||| |||||||||||||||| ||||||||||||| ||| ||  ||||| |||||||    ||||||||||||| |||| ||    
T  41364829 ggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagccccatt 41364928  T
Q  131 gcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||  ||||| || ||||| ||||||||||| || |||||||  |  ||||| ||||||||||    
T  41364929 gcaactttggtcattttgatcaattttgacctagtcaacgctgatttggcatgccacatgtg 41364990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 160
Target Start/End: Original strand, 45156062 - 45156179
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 142  Q
    |||||| ||||||| |||||||||||| |||||||| ||   || ||| ||||||||||||||||  || ||||||||||||| |||||  |||||| ||    
T  45156062 ttttcctcccttaagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaattttaaccctctaagatttaacctctttgtatctttggtc 45156161  T
Q  143 cttttggtcaattttgac 160  Q
     |||||||||||||||||    
T  45156162 tttttggtcaattttgac 45156179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 35067104 - 35066972
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||||||| ||||||||| || | ||||||||||| || | | ||||||||||||||| | ||||||| ||||| |||||    
T  35067104 aggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagcccct 35067005  T
Q  129 ttgcttctttgatccttttggtcaattttgact 161  Q
    ||||     |  |||||||||||||||||||||    
T  35067004 ttgcaataatagtccttttggtcaattttgact 35066972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 44404441 - 44404572
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    |||||||| |||| |||| ||| | |||||||||||||||  ||||||| ||||| |||||| |||||||| |||||| | ||||||| ||||| ||  |    
T  44404441 aggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagccaat 44404540  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    |||| |||||| || |||||||||||||||||    
T  44404541 ttgcatctttggtcattttggtcaattttgac 44404572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 7675560 - 7675451
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||| | ||||| || ||||||||||||||||| |||||||| || | |||||| ||||| || ||||||   ||||||||||||| ||||||    
T  7675560 aggctaaagtgtactttccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcccctt 7675461  T
Q  130 tgcttctttg 139  Q
    ||| ||||||    
T  7675460 tgcatctttg 7675451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 14999284 - 14999360
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    ||||||||||| | ||| ||||| |||||||||||||||| |||||||| |||| |||||| |||||||||||||||    
T  14999284 aggctaaagtgtacttttcccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 14999360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 33088091 - 33088194
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 153  Q
    ||||||||||||||||  ||||||   | | ||| ||||||||||||||||||| |||| ||||||||| ||| |||||||||||  ||||||||| |||    
T  33088091 taactttcaaaaacttgtaatttttatctcctaaatataaaaactacaattttattcccttaagatttagcccatttgcttctttagtccttttggccaa 33088190  T
Q  154 tttt 157  Q
    ||||    
T  33088191 tttt 33088194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 52828168 - 52828009
Alignment:
Q  34 taaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| ||| |||||| ||| |||||||||||| |||||||||| || ||||||  ||||| |||||||    ||||||||||||| |||| ||||    
T  52828168 taaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 52828069  T
Q  133 ttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
      ||||| ||||||||  |||||||||| || |||||||  |  ||||| ||||||||||    
T  52828068 aactttggtccttttgaccaattttgacctagtcaacgctgatttggcatgccacatgtg 52828009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 160
Target Start/End: Original strand, 46066547 - 46066652
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 153  Q
    ||||||||||||| || | ||||| ||||| || ||| ||||||||||||||||| ||||||||||||| ||  ||||| ||| ||||| ||||| ||||    
T  46066547 taactttcaaaaagttgcgattttagccccttatgtacaaaaactacaattttag-cccctaagatttagccaatttgcatctctgatctttttgatcaa 46066645  T
Q  154 ttttgac 160  Q
    |||||||    
T  46066646 ttttgac 46066652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 33088719 - 33088616
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| ||| || |||| ||||||||||| |||||||| |||  |||||| |||||||||||||||    |||||||||||| |||||    
T  33088719 aggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagcccct 33088620  T
Q  129 ttgc 132  Q
    ||||    
T  33088619 ttgc 33088616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 40384748 - 40384855
Alignment:
Q  53 ttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtca 152  Q
    |||| ||||||||| || ||||||| | | | || ||| |||||||||||||||  |||||||| ||||| || |||||| |||||| ||||||||| ||    
T  40384748 ttaattttcaaaaagttgcaattttagtctcctatgtacaaaaactacaattttgatcccctaaaatttagcctctttgcatctttggtccttttggcca 40384847  T
Q  153 attttgac 160  Q
    ||||||||    
T  40384848 attttgac 40384855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 30248174 - 30248243
Alignment:
Q  92 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgactt 162  Q
    ||||||||||||||||  || |||||||||||| ||||||| ||||||||| |||||| ||||||||||||    
T  30248174 aaaaactacaattttac-cctctaagatttaactcctttgcatctttgatcattttggccaattttgactt 30248243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 7674527 - 7674602
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    ||||||||||||  ||| ||||| ||||||| |||||||| ||||||||| ||| |||||| |||||||||||||||    
T  7674527 aggctaaagtgcccttttcccccctaacttttaaaaacttgcaattttgggccc-taagtacaaaaactacaatttt 7674602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 130
Target Start/End: Original strand, 16290092 - 16290194
Alignment:
Q  30 aggctaaagtgcattttcccccctt--aactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 127  Q
    |||||||||||||||||  |||| |  ||| |||||||| || ||||||||| ||| || ||||||||||||||||||||  | || |||| ||||||||    
T  16290092 aggctaaagtgcattttttccccatctaacgttcaaaaagttgcaattttggtcccttatgtataaaaactacaattttaacctcccaagaattaacccc 16290191  T
Q  128 ttt 130  Q
    |||    
T  16290192 ttt 16290194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 44412032 - 44411937
Alignment:
Q  65 aacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgac 160  Q
    ||||| ||||||| | ||| |||||| ||||||||||||||||  ||  |||||||||  ||||||||  ||||||||||||| | ||||||||||    
T  44412032 aacttgcaattttagtcccctaagtacaaaaactacaattttacccctttaagatttaggccctttgcaactttgatcctttttgccaattttgac 44411937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 33739094 - 33739222
Alignment:
Q  31 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 130  Q
    ||||||| ||||||||  |||  |||||||||||| |||  ||||||| |||| || | | | |||||| || |||  |||||||| |||||||||| ||    
T  33739094 ggctaaaatgcattttttccctctaactttcaaaagcttgtaattttgaccccttacgcacagaaactaaaaattttatcccctaaaatttaaccccatt 33739193  T
Q  131 gcttctttgatccttttggtcaattttga 159  Q
    ||  |||| ||| ||||||||||||||||    
T  33739194 gcaactttaatcattttggtcaattttga 33739222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 12390083 - 12389981
Alignment:
Q  30 aggctaaagtgcattttcccc-ccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||||||| ||| |||||||||||||||| || | ||||||  ||| || ||| ||||| || |||||| | ||||| ||||||| |||||    
T  12390083 aggctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggccccct-agatttagcccct 12389985  T
Q  129 ttgc 132  Q
    ||||    
T  12389984 ttgc 12389981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 30249529 - 30249450
Alignment:
Q  92 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgc 171  Q
    |||||||||||||||   ||| ||||||||| | | ||||  ||||||||| ||||| |||||||||||||| |||||||    
T  30249529 aaaaactacaattttgaccccttaagatttagctcatttgtatctttgatctttttgatcaattttgacttagtcaacgc 30249450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 2940334 - 2940395
Alignment:
Q  99 acaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgac 160  Q
    ||||||||  ||||||||||||||||| ||||||   |||||||||||| || |||||||||    
T  2940334 acaattttgatcccctaagatttaacctctttgcaattttgatccttttagttaattttgac 2940395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 180
Target Start/End: Original strand, 7674596 - 7674625
Alignment:
Q  151 caattttgacttattcaacgcctacgtggc 180  Q
    ||||||||||||||||||||||||||||||    
T  7674596 caattttgacttattcaacgcctacgtggc 7674625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 160
Target Start/End: Original strand, 43377733 - 43377850
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 142  Q
    |||| ||| ||||| ||| ||| |||| ||||||| | ||  |||||||||||| || |||||| | | ||||| |||||  | |||| |  ||||||||    
T  43377733 tttttcccgcttaatttttaaacacttgcaattttagtcctttaagtataaaaattataattttggcctcctaaaatttagtctctttacacctttgatc 43377832  T
Q  143 cttttggtcaattttgac 160  Q
    ||||||||||||||||||    
T  43377833 cttttggtcaattttgac 43377850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 7987952 - 7987905
Alignment:
Q  35 aaagtgcattttccccccttaactttcaaaaacttccaattttggcccc 83  Q
    |||||||||||| |||||| |||||||||||| || |||||||||||||    
T  7987952 aaagtgcatttttccccct-aactttcaaaaatttacaattttggcccc 7987905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 124; Significance: 1e-63; HSPs: 2)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 19487 - 19650
Alignment:
Q  30 aggctaaagtgcatttt-ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||||||| |||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||    
T  19487 aggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagatttaacccct 19586  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19587 ttgcatctttgatcattttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 19650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 292 - 460
Target Start/End: Original strand, 19741 - 19899
Alignment:
Q  292 ctcttcttcatgttcatgtctatcttcatctcttccaatcaaacccaaacaaacaaaaattactagaacaaaggacattggtacatagaagcatgctaca 391  Q
    ||||||||||||||||||||||||||||||||||||||          ||||||||||||||| ||||||||| |   ||||||||| ||||||||||||    
T  19741 ctcttcttcatgttcatgtctatcttcatctcttccaa----------acaaacaaaaattaccagaacaaagaagcatggtacataaaagcatgctaca 19830  T
Q  392 ccaattcatttcattattagtcataataatactctaaattgttttcccgaataaaaatcattctttctt 460  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  19831 ccaattcatttcattcttagtcataataataccctaatttgttttcccgaataaaaatcattctttctt 19899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 8e-59; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 10007865 - 10007702
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||| |||||||| ||||||||||||||| |||||    
T  10007865 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagcccct 10007766  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  10007765 ttgcatctttggtccttttcgtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 10007702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 10006344 - 10006506
Alignment:
Q  31 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||| ||||| |||||||| | ||||||||||||| ||||||    
T  10006344 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcccctt 10006443  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10006444 tgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 10006506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 36 - 192
Target Start/End: Complemental strand, 1824174 - 1824017
Alignment:
Q  36 aagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgctt 134  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||| | ||||||||||||| ||  ||||| |    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcat 1824075  T
Q  135 ctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1824074 ctttggtccttttggtcaattttgacttattcaacgcctacgtggtaggccacatgtg 1824017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 36 - 192
Target Start/End: Complemental strand, 1858619 - 1858462
Alignment:
Q  36 aagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgctt 134  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||| | ||||||||||||| ||  ||||| |    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcat 1858520  T
Q  135 ctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1858519 ctttggtccttttggtcaattttgacttattcaacgcctacgtggtaggccacatgtg 1858462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 30 - 175
Target Start/End: Original strand, 5513981 - 5514126
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| |||  |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||   ||||||| ||||| ||||||    
T  5513981 aggctaaagtgcacttttaccccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagcccctt 5514080  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctac 175  Q
    ||| |||||| |||||||| ||||||||||||||||||| ||||||    
T  5514081 tgcatctttggtccttttgatcaattttgacttattcaatgcctac 5514126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 1823551 - 1823709
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||| | |||| ||||||||||||| |||||||| |||||||| |||  |||||| ||||||||||||||  ||||||||||||||| ||| |    
T  1823551 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccat 1823650  T
Q  129 ttgc-ttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggcca 186  Q
    |||| || |||| ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  1823651 ttgcattttttggtccttttggccaattttgatttattcaacgcctacgtggcaggcca 1823709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 1857996 - 1858154
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||| | |||| ||||||||||||| |||||||| |||||||| |||  |||||| ||||||||||||||  ||||||||||||||| ||| |    
T  1857996 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccat 1858095  T
Q  129 ttgc-ttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggcca 186  Q
    |||| || |||| ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  1858096 ttgcattttttggtccttttggccaattttgatttattcaacgcctacgtggcaggcca 1858154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 24122882 - 24123012
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||||||| ||||| ||||||| ||||| || |||||||| |||| |||||| |||||||| |||||||||||||||||||||| |  |||    
T  24122882 aggctaaagtgcatttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatttagcttctt 24122981  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    ||| |||||| ||||||||||||||||||||    
T  24122982 tgcatctttggtccttttggtcaattttgac 24123012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 30335638 - 30335801
Alignment:
Q  30 aggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||||||| || ||||||||||| |||||||| |||||||||| |  |||||| ||||| ||||||||||  ||||||||||||| |||||    
T  30335638 aggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagatttagcccct 30335737  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| |||||||| |||||||||||  | ||||||| |  |||||| ||||||||||    
T  30335738 ttgcatctttggtccttttgttcaattttgaccaagtcaacgcatgtgtggcatgccacatgtg 30335801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 22221466 - 22221324
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| ||| |||||||||||||||| |||||||| |||| ||||||| ||||||||||||||   ||||||||||||| |||||    
T  22221466 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccct 22221367  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgc 171  Q
    || | |||||||||||||| | ||||||||||||  |||||||    
T  22221366 ttacatctttgatccttttagccaattttgacttggtcaacgc 22221324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 22227808 - 22227666
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| ||| |||||||||||||||| |||||||| |||| ||||||| ||||||||||||||   ||||||||||||| |||||    
T  22227808 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccct 22227709  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgc 171  Q
    || | |||||||||||||| | ||||||||||||  |||||||    
T  22227708 ttacatctttgatccttttagccaattttgacttggtcaacgc 22227666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 29968434 - 29968308
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    ||||||||| ||| ||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||||| | ||||||||||||||| |||| ||||     
T  29968434 taaagtgcacttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtcccctaagatttagccccattgca 29968335  T
Q  134 tctttgatccttttggtcaattttgac 160  Q
     |||| ||| |||||| ||||||||||    
T  29968334 actttaatcattttggccaattttgac 29968308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 24123981 - 24123869
Alignment:
Q  48 cccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatcctttt 147  Q
    ||||| |||||||||||||||| ||||||||||| | ||||||  |||| ||||||||||| | ||||||||||| ||||||||| |||||| |||||||    
T  24123981 cccccgtaactttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcccctttgcatctttggtcctttt 24123882  T
Q  148 ggtcaattttgac 160  Q
    |||||||||||||    
T  24123881 ggtcaattttgac 24123869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 8389787 - 8389660
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| |||||||| ||||| ||||||||| || ||||||||| ||| || ||| ||||||||||||||||||||||||||||||||||||||| |    
T  8389787 taaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagatttaacccctttac 8389688  T
Q  133 ttctttgatccttttggtcaattttgac 160  Q
     | |||| ||||||||  ||||||||||    
T  8389687 atttttggtccttttgaacaattttgac 8389660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 12353461 - 12353332
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||||||  ||||||| |||||| | ||||||||||||| |||| |    
T  12353461 aggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagta-caaaactataattttggccccctaagatttagccccat 12353363  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    |||   ||| || ||||||||||||||||||    
T  12353362 tgcaattttaattcttttggtcaattttgac 12353332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 18979220 - 18979091
Alignment:
Q  32 gctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 130  Q
    ||||||||||| |||||||||| |||||||||| ||||| ||||||||||||| ||| |||||||||||||||||| | ||| || |||||| ||| |||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgatttagcccattt 18979121  T
Q  131 gcttctttgatccttttggtcaattttgac 160  Q
    ||  ||||||||||||| | ||||||||||    
T  18979120 gcaactttgatcctttttgccaattttgac 18979091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 22220388 - 22220517
Alignment:
Q  31 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| ||| |||||| ||||||| ||| |||| |||||||| |||| || ||||||||||||||||||| | ||||||||||||| ||| ||    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagcccatt 22220487  T
Q  130 tgcttctttgatccttttggtcaattttga 159  Q
    ||| |||||| |||||||| ||||||||||    
T  22220488 tgcatctttggtccttttgatcaattttga 22220517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 40471244 - 40471118
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| ||||||||| |||||||| |||||||| ||||||||| || |||| || ||||||||||||||||| ||| |||||||||||| |||||     
T  40471244 taaagtgcacttttccccctttaactttaaaaaacttacaattttggtcc-ataaatacaaaaactacaattttagccccttaagatttaacctctttgt 40471146  T
Q  133 ttctttgatccttttggtcaattttgac 160  Q
     |||||| || |||||||||||||||||    
T  40471145 atctttggtcattttggtcaattttgac 40471118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 11283310 - 11283180
Alignment:
Q  31 ggctaaagtgcattttcccccc-ttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||||||||||||| |||||||||||||| ||  |||||| ||||| || |||||||||  |||||||| ||||||||| ||||| ||||||    
T  11283310 ggctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttggtcccctaaaatttagcccctt 11283211  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    |||   ||||||| |||| ||||||||||||    
T  11283210 tgcaattttgatcattttagtcaattttgac 11283180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 43 - 160
Target Start/End: Original strand, 18978033 - 18978149
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 142  Q
    ||||||||||| ||||||||||| ||| ||||||||||||| |||||| ||||||||||||||| | ||| ||||||||| |||||||||  ||||||||    
T  18978033 ttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcccctttgcaactttgatc 18978131  T
Q  143 cttttggtcaattttgac 160  Q
    |||||   ||||||||||    
T  18978132 cttttttccaattttgac 18978149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 154
Target Start/End: Complemental strand, 32207425 - 32207302
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| |||||||||| ||| ||||||||||| |||||||| | || |||||| ||||||||||||||| | | | ||||||||| || |||    
T  32207425 aggctaaagtgcactttcccccct-aaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagcctctt 32207327  T
Q  130 tgcttctttgatccttttggtcaat 154  Q
    ||| |||||| ||||||||||||||    
T  32207326 tgcatctttggtccttttggtcaat 32207302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 12351920 - 12352051
Alignment:
Q  30 aggctaaagtgcattttcccc-ccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||||||||||| |||||||||||||||| || |||||||| |||| |||||| |||||||||||||||   ||||||||||||| || |     
T  12351920 aggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagcctca 12352019  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||   ||| | |||||||| ||||||||||    
T  12352020 ttgcaattttaacccttttggacaattttgac 12352051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 8388463 - 8388592
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| |||||||||| |||||| ||||| || ||||||| ||||| || ||| |||||||| |||||| | ||||||||||||| ||||||    
T  8388463 aggctaaagtgcactttcccccct-aacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcccctt 8388561  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    ||| | |||| ||||||||  ||||||||||    
T  8388562 tgcgtttttggtccttttgcccaattttgac 8388592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 43 - 160
Target Start/End: Original strand, 18970924 - 18971040
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccct-aagatttaacccctttgcttctttgat 141  Q
    ||||||||||| ||||||||||| ||| ||||||||||||| |||||| ||||||||||||||| | ||||| ||||||||||||||||||  ||||| |    
T  18970924 ttttcccccct-aactttcaaaatctttcaattttggccccctaagtacaaaaactacaatttt-gacccctgaagatttaacccctttgcaactttggt 18971021  T
Q  142 ccttttggtcaattttgac 160  Q
    |||||| | ||||||||||    
T  18971022 cctttttgccaattttgac 18971040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 182
Target Start/End: Complemental strand, 23170098 - 23169940
Alignment:
Q  31 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaa--------ctacaattttagtcccctaagattta 122  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||  ||| |||||| |||||        ||| |||||| ||||| || ||||||    
T  23170098 ggctaaagtgcattttcccccct-aattttcaaaaacttgcaattttgatcccctaagtacaaaaagtcaaaaactataattttggtcccttatgattta 23170000  T
Q  123 acccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcag 182  Q
     | |  |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  23169999 gctcaattgcatctttaatccttttggtcaattttgacttattcaatgcctacgtggcag 23169940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 30336602 - 30336472
Alignment:
Q  31 ggctaaagtgcattt-tccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| || | ||||| ||||||||||||||||  |||||| ||| | |||||| ||||||||||||||||  || |||||||||| ||  ||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagccattt 30336503  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    ||| |||||| ||||||||||||||||||||    
T  30336502 tgcatctttggtccttttggtcaattttgac 30336472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 11456679 - 11456759
Alignment:
Q  100 caattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggc 180  Q
    ||||||| | |||||| |||||| |||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  11456679 caattttggccccctatgatttagccccattgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggc 11456759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 192
Target Start/End: Original strand, 43661267 - 43661427
Alignment:
Q  33 ctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 131  Q
    |||||||||| |||||  ||||||| ||| ||||| || ||||||||| ||| || ||| |||||||| |||||| | ||||||||||||| ||||||||    
T  43661267 ctaaagtgcacttttctacccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataattttggccccctaagatttagcccctttg 43661366  T
Q  132 cttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    | |||||| | ||||||||||| ||||||  | ||||||| || |||||| ||||| ||||    
T  43661367 catctttggttcttttggtcaactttgaccaagtcaacgcatatgtggcatgccacgtgtg 43661427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 30568886 - 30569016
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||||||||  ||| ||||||||| || ||||||||  | | || ||| |||||||| ||||||  |||||||||||||| ||||||    
T  30568886 aggctaaagtgcactttccccctctaagtttcaaaaagttacaattttgatctcttaggtacaaaaactataattttgatcccctaagatttagcccctt 30568985  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    ||| |||||| ||||||||| ||||| ||||    
T  30568986 tgcatctttggtccttttggccaattgtgac 30569016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 11282011 - 11282138
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| |||| ||||||||||||| ||||| || ||||||||||||| ||  || |||||  ||||||||   |||||||||||||||||||||||    
T  11282011 taaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagatttaacccctttgc 11282110  T
Q  133 ttctttgatccttttggtcaattttgac 160  Q
       ||||||| ||||| |||||||||||    
T  11282111 aattttgatctttttgatcaattttgac 11282138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 34625239 - 34625163
Alignment:
Q  92 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaa 168  Q
    ||||||||||||||||| |||||| |||||| || ||| ||  ||||||||||||||||||||||||||||| ||||    
T  34625239 aaaaactacaattttagccccctatgatttaccctcttcgcaactttgatccttttggtcaattttgacttagtcaa 34625163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 11287779 - 11287906
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| |||| | ||| ||||||| |||||||| ||||||||||||  |||||| | ||||||||||||| | ||||||||| ||||| |||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaattaactcctttgc 11287878  T
Q  133 ttctttgatccttttggtcaattttgac 160  Q
       ||||||| ||||  |||||||||||    
T  11287879 aattttgatcatttttatcaattttgac 11287906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 43661925 - 43661762
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||| ||||||| |||||| ||||||||||||||||| || |||||||   ||  || ||| |||||||| |||||| | ||||||||||||  |||      
T  43661925 aggctgaagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggccccctaagatttcgcccaa 43661826  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| |||||||| |||||||||||  | ||||||| |  |||||| ||||||||||    
T  43661825 ttgcatctttggtccttttgatcaattttgaccaagtcaacgcatgtgtggcatgccacatgtg 43661762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 160
Target Start/End: Original strand, 29043411 - 29043528
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 142  Q
    |||||| |||||||| |||||||| |  | |||||| |||| || ||| |||||||||||||||   || |||||||||| ||||||||  |||||||||    
T  29043411 ttttcctcccttaaccttcaaaaagtcgcgattttgaccccctatgtacaaaaactacaattttttccctctaagatttagcccctttgtatctttgatc 29043510  T
Q  143 cttttggtcaattttgac 160  Q
    ||||| | ||||||||||    
T  29043511 cttttagacaattttgac 29043528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 29043757 - 29043817
Alignment:
Q  294 cttcttcatgttcatgtctatcttca-tctcttccaatcaaacccaaacaaacaaaaatta 353  Q
    |||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||||||    
T  29043757 cttcttcatgttgatgtctatcttaaatctcttccaatccaacccaaacaaacaaaaatta 29043817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 24488763 - 24488679
Alignment:
Q  47 ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    |||||| |||||||||||||||| ||||||||||||| ||| ||| ||||| |||||||| | ||| ||||||||| |||| ||||    
T  24488763 ccccccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaatttt-gccccgtaagatttagccccattgc 24488679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 18488301 - 18488202
Alignment:
Q  92 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgt 191  Q
    ||||||||||||||| | || ||||||| |||||||||||| |||||| ||||||||  || |||||||  | |||| |||||||||||| |||| ||||    
T  18488301 aaaaactacaattttggccctctaagatataacccctttgcatctttggtccttttgaccagttttgac-cagtcaatgcctacgtggcatgccaaatgt 18488203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 45114618 - 45114488
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||| ||||||| |||||| ||| |||||||||||||||| |||||||||  |  || ||| | ||||||||||||| | || ||||||||||||| |     
T  45114618 aggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaatttt-ggcctctaagatttaacctca 45114520  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  |||| ||| ||||||| |||||||||    
T  45114519 ttgcaactttaatcattttggttaattttgac 45114488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 45112875 - 45113000
Alignment:
Q  35 aaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgctt 134  Q
    |||||||||||| || || ||||||||||||| ||  |||||| | | | |||||| ||||| || |||||| ||||||||||| ||| |||||||||      
T  45112875 aaagtgcatttttcctccctaactttcaaaaatttgtaattttagtctc-taagtacaaaaattataattttggtcccctaagaattagcccctttgcaa 45112973  T
Q  135 ctttgatccttttggtcaattttgact 161  Q
     ||||||| ||||  ||||||||||||    
T  45112974 ttttgatcttttttatcaattttgact 45113000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 5003198 - 5003107
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagta-taaaaactacaattttagtcccctaagattta 122  Q
    ||||||||| ||| |||||||||| ||||||||||| ||| |||||||   ||| |||||| ||||||| |||||||| |||||||||||||||    
T  5003198 aggctaaagcgcactttcccccct-aactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaatttt-gtcccctaagattta 5003107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 32968455 - 32968588
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | || ||| | |||| |||||    
T  32968455 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatgttttagcccct 32968554  T
Q  129 ttgcttctttgatccttttggtcaattttgactt 162  Q
    |||| | ||   ||||||||  ||||||||||||    
T  32968555 ttgcattttcagtccttttgagcaattttgactt 32968588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 3819489 - 3819541
Alignment:
Q  31 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggcccc 83  Q
    |||||||||||||||| ||||||||| ||||||||  || |||||||||||||    
T  3819489 ggctaaagtgcatttttcccccttaagtttcaaaatgttgcaattttggcccc 3819541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 30570295 - 30570227
Alignment:
Q  92 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgac 160  Q
    ||||| || |||||| | ||||||||||||| ||| ||||| |||||| ||||||||| ||||||||||    
T  30570295 aaaaattagaattttggccccctaagatttagcccttttgcatctttggtccttttggccaattttgac 30570227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 32974037 - 32973905
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||| ||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | || ||| | |||| ||||||    
T  32974037 ggctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatgttttagcccctt 32973938  T
Q  130 tgcttctttgatccttttggtcaattttgactt 162  Q
    ||| | ||   ||||||||| ||||||||||||    
T  32973937 tgcattttcagtccttttggacaattttgactt 32973905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 2380004 - 2379895
Alignment:
Q  49 ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttg 148  Q
    |||| ||||||||||||| ||  |||||||||||| || |||   ||||||||||||| | ||| ||||||||| | | ||||| |||||| | ||||||    
T  2380004 ccccctaactttcaaaaagttgtaattttggcccc-tatgta-cgaaactacaattttggccccttaagatttagctcatttgcatctttggttcttttg 2379907  T
Q  149 gtcaattttgac 160  Q
    ||||||||||||    
T  2379906 gtcaattttgac 2379895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 5514266 - 5514223
Alignment:
Q  145 tttggtcaattttgacttattcaacgcctacgt-ggcaggccac 187  Q
    |||||||||||||||||||||||| |||||||| ||||||||||    
T  5514266 tttggtcaattttgacttattcaatgcctacgtgggcaggccac 5514223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 36249552 - 36249603
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggcc 81  Q
    |||||||||||| |||||||||||||| ||||||||| || |||||||||||    
T  36249552 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttggcc 36249603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 38980146 - 38980043
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | |||||| | |||| ||||     
T  38980146 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagcccca 38980047  T
Q  129 ttgc 132  Q
    ||||    
T  38980046 ttgc 38980043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 39011243 - 39011140
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | |||||| | |||| ||||     
T  39011243 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagcccca 39011144  T
Q  129 ttgc 132  Q
    ||||    
T  39011143 ttgc 39011140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 159
Target Start/End: Original strand, 17844277 - 17844403
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||||||| |  || ||||||||| ||   ||||||| ||  || ||| ||||||||||||||| || |||||| |||||||| |||    
T  17844277 aggctaaagtgcactttcccctccaaagtttcaaaaagttgtgattttggtcc--tatgtacaaaaactacaattttggt-ccctaacatttaacctctt 17844373  T
Q  130 tgcttctttgatccttttggtcaattttga 159  Q
    |   |||||| ||||||||| |||||||||    
T  17844374 tatatctttggtccttttggccaattttga 17844403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 38974795 - 38974897
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||||||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | |||||| | |||| |||| |    
T  38974795 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccat 38974894  T
Q  130 tgc 132  Q
    |||    
T  38974895 tgc 38974897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 39005893 - 39005995
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||||||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | |||||| | |||| |||| |    
T  39005893 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccat 39005992  T
Q  130 tgc 132  Q
    |||    
T  39005993 tgc 39005995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 24483143 - 24483196
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggcccc 83  Q
    |||||||||||| |||||||| | ||| |||||||||||| |||||||||||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggcccc 24483196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 2e-56; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 18487004 - 18486841
Alignment:
Q  30 aggctaaagtgcattttcccccc-ttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||| |||| |||||||| | ||||||||||||| |||||    
T  18487004 aggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagcccct 18486905  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18486904 ttgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 18486841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 19752911 - 19753073
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| ||||| |||||||||||||||| ||||||||||||| |||||| ||||||||||||||| | |||||| |||||| |||| |    
T  19752911 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccat 19753010  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19753011 tgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 19753073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 25523068 - 25523219
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||   ||||||||||||| |||||    
T  25523068 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcccct 25523167  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggc 180  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  25523168 ttgcatctttgatccttttgatcaattttgatttattcaacgcctacgtggc 25523219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 19754233 - 19754069
Alignment:
Q  30 aggctaaagtgcattttc--cccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 127  Q
    |||||||||||||||||   ||||| |||||||||||||||| ||||||||||||| ||| || ||||||||||||||| | |||||| |||||| ||||    
T  19754233 aggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagcccc 19754134  T
Q  128 tttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
     |||| |||||| ||||||||  ||||||||||||||||||||||||||||| ||||||| ||||    
T  19754133 attgcatctttggtccttttgaacaattttgacttattcaacgcctacgtggaaggccacgtgtg 19754069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 22940723 - 22940567
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||||| | ||||||| ||||| ||||||    
T  22940723 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaatttt-gacccctaaaatttagcccctt 22940625  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccac 187  Q
    | | ||||| |||||||||||||||||||||  | |||||||||| |||||| |||||    
T  22940624 ttcatcttttatccttttggtcaattttgaccaagtcaacgcctaagtggcatgccac 22940567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 18485137 - 18485307
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagt-------cccctaagattt 121  Q
    ||||||||||||| |||  ||||| ||||||| |||||||| ||||||||||||| ||||||| ||||| |||||||| |        ||||||||||||    
T  18485137 aggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgggttttggccccctaagattt 18485236  T
Q  122 aacccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    | ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  18485237 agcccctttgcatctttgatccttttggttaattttgacttattcaacgcctacgtggcaggccacgtgtg 18485307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 28538675 - 28538806
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| ||| |||||||||||||||| |||||||| |||| |||||| ||||||||||||||||| ||||||||||||| |||||    
T  28538675 aggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcccct 28538774  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  ||||||||||||| ||||||||||||    
T  28538775 ttgcaactttgatcctttttgtcaattttgac 28538806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 16650957 - 16650827
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| ||||||||||| |||||||| |||||||| |||| |||||||||||||||||||||||| |||||||| |||| ||| |    
T  16650957 aggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagcccat 16650858  T
Q  129 ttgcttctttgatccttttggtcaattttga 159  Q
    |||| |||||| |||||||||||||||||||    
T  16650857 ttgcatctttggtccttttggtcaattttga 16650827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 24332916 - 24333074
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||||||||||| || ||| |||||||||||||||   || ||||||||||||||||||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 24333015  T
Q  133 ttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
     |||||| ||||||||||||||||||||  | |||| |||||||||||| ||||| ||||    
T  24333016 atctttggtccttttggtcaattttgac-cagtcaatgcctacgtggcatgccacgtgtg 24333074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 192
Target Start/End: Complemental strand, 25524158 - 25524037
Alignment:
Q  71 caattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacg 170  Q
    ||||||||||| | |||||| |||||||| ||||||   ||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||||    
T  25524158 caattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcccctttgcatctttagtccttttggtcaattttgacttattcaacg 25524059  T
Q  171 cctacgtggcaggccacatgtg 192  Q
    |||||||||||| |||| ||||    
T  25524058 cctacgtggcagaccacgtgtg 25524037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 36486590 - 36486459
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||| ||||||| |||| ||||| ||||||| |||||||| |||||||| |||| |||||| ||||||||||||||| |||||||||||||||  ||||    
T  36486590 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagtccct 36486491  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  ||||||||||||| ||||||||||||    
T  36486490 ttgcaactttgatcctttttgtcaattttgac 36486459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 28539917 - 28539791
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    ||||||||||||| ||||| ||||||| |||||||| |||||||| |||  |||||| ||||||||||||||| |||||||||||||||  ||||||||     
T  28539917 taaagtgcatttttcccccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatttagtccctttgca 28539818  T
Q  134 tctttgatccttttggtcaattttgac 160  Q
     ||||||||||||| | ||||||||||    
T  28539817 actttgatcctttttgccaattttgac 28539791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 42195137 - 42195262
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    ||||||||| ||| ||||||||||||| ||||| || | ||||||||||| || ||| |||| |||||||||| ||||||||||||||| |||||||||     
T  42195137 taaagtgcacttttcccccttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgca 42195235  T
Q  134 tctttgatccttttggtcaattttgac 160  Q
    |||||| ||||||||||||||||||||    
T  42195236 tctttggtccttttggtcaattttgac 42195262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 54 - 186
Target Start/End: Complemental strand, 2686478 - 2686346
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 153  Q
    ||||||| |||||||| ||||||||  | | |||||| |||||||| |||||| |||||||| |||||| || | |||| |||||| |||||||| ||||    
T  2686478 taacttttaaaaacttgcaattttgatctcttaagtacaaaaactataattttggtcccctatgatttagcctcattgcatctttggtccttttgatcaa 2686379  T
Q  154 ttttgacttattcaacgcctacgtggcaggcca 186  Q
    ||||||||||||||||||||||||  |||||||    
T  2686378 ttttgacttattcaacgcctacgtatcaggcca 2686346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 36485302 - 36485430
Alignment:
Q  33 ctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 131  Q
    |||||||||||||| || ||| ||||||| |||||||| |||||||| || | |||||| |||||||| |||||| | ||||||||||||||||||||||    
T  36485302 ctaaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagatttaacccctttg 36485401  T
Q  132 cttctttgatccttttggtcaattttgac 160  Q
    |  |||||||| |||| ||||||||||||    
T  36485402 caactttgatcatttttgtcaattttgac 36485430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 33160388 - 33160227
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||| |||||||| |||||||||||||   ||| |||||||| | |||     
T  33160388 aggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagattt-agccca 33160290  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||  |||| |||||||| | ||||||||||    |||| |||||||||||| ||||||||||    
T  33160289 ttgcaactttaatccttttagccaattttgac-cggtcaatgcctacgtggcacgccacatgtg 33160227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 42196302 - 42196171
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||  ||||||| ||||| ||   | ||||||||  || ||| |||||||||| |||||||||||||||||||| ||| |    
T  42196302 aggctaaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttagtcccctaagatttagcccat 42196203  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    |||| |||||| ||||||||||||||||||||    
T  42196202 ttgcatctttggtccttttggtcaattttgac 42196171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 5778938 - 5778775
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||| ||||| ||||||  ||||| |||||||    ||||||||||||| ||||     
T  5778938 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 5778839  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||  ||||| ||||||||  |||||||||| || |||||||  |  ||||| ||||||||||    
T  5778838 ttgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 5778775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 40255774 - 40255643
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||| ||||| ||| |||||||| |||||||| |||| ||| || | ||||||||||||| | ||||||||||||||||||     
T  40255774 aggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagatttaacccca 40255675  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||   ||| ||| ||||| |||||||||||    
T  40255674 ttgcaattttaatctttttgatcaattttgac 40255643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 2186774 - 2186900
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    |||||||||||||  |||| ||| ||||||||| || ||||||||| |   || ||| |||||||||||||||| |||||||||||||| ||  ||| |     
T  2186774 taaagtgcattttttccccctaagtttcaaaaagttgcaattttggtcttctatgtacaaaaactacaattttaatcccctaagatttagccattttaca 2186873  T
Q  134 tctttgatccttttggtcaattttgac 160  Q
    |||||| ||||||||||||||||||||    
T  2186874 tctttggtccttttggtcaattttgac 2186900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 159
Target Start/End: Original strand, 25055411 - 25055541
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| ||||||| ||   ||| ||||||||  ||| || ||||||||||||||||||| | ||||||||||||| ||| |    
T  25055411 aggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagcccat 25055510  T
Q  129 ttgcttctttgatccttttggtcaattttga 159  Q
    |||| |||||| |||||||| ||||||||||    
T  25055511 ttgcatctttggtccttttgatcaattttga 25055541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 5730934 - 5730822
Alignment:
Q  59 ttcaaaaacttccaattttggccccataagtataaaaactacaattttagt-cccctaagatttaacccctttgcttctttgatccttttggtcaatttt 157  Q
    ||||||||||||||||||||||||| ||||||  ||||| |||| |||||| |||||||||||||||||| ||||  ||||| | |||||| ||||||||    
T  5730934 ttcaaaaacttccaattttggccccctaagtaccaaaaccacaa-tttagtccccctaagatttaaccccattgcaactttggttcttttgatcaatttt 5730836  T
Q  158 gacttattcaacgc 171  Q
    ||| || |||||||    
T  5730835 gacctagtcaacgc 5730822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 16650047 - 16650122
Alignment:
Q  85 taagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgac 160  Q
    |||||| |||||||||||||||   || |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  16650047 taagtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtcaattttgac 16650122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 1796054 - 1796156
Alignment:
Q  31 ggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||||||| || ||| |||||||||||||||| ||| ||||||| | |||||| |||||||||||||||  ||||| |||| ||||||| ||    
T  1796054 ggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttgatcccccaagaattaacccatt 1796153  T
Q  130 tgc 132  Q
    |||    
T  1796154 tgc 1796156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 5777900 - 5778017
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||| |||| ||||||  ||||| |||||||    ||||||||||||| |||| |    
T  5777900 aggctaaagtgcactttcccccct-aactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 5777998  T
Q  130 tgcttctttgatccttttg 148  Q
    |||  ||||| ||||||||    
T  5777999 tgcaactttggtccttttg 5778017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 21835040 - 21835162
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||||||||  ||| ||| ||||| ||   |||||| |||| || ||| |||||||||||||||   ||||||||||||||||||||    
T  21835040 aggctaaagtgcactttccccctctaagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaattttgaccccctaagatttaacccctt 21835139  T
Q  130 tgcttctttgatccttttggtca 152  Q
    |||  ||||||||||||| ||||    
T  21835140 tgcaactttgatccttttagtca 21835162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 25056482 - 25056390
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 122  Q
    |||||||||||| |||||| | | |||||||||||||||| |||||||| |||| ||||||| ||||||||||||||   |||||||||||||    
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagattta 25056390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 7311607 - 7311682
Alignment:
Q  47 ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 122  Q
    |||||| |||||||||||||||| |||| |||||| |  ||||| ||||||||||||||||| |||||||||||||    
T  7311607 ccccccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagattta 7311682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 1797398 - 1797268
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||| |||||  ||| |||| ||| |||||||| |||||||||| || ||   | ||||||||||||||| ||||| ||||||||| ||||||    
T  1797398 aggctaaagtggattttttccctttaagttttaaaaacttgcaattttggctccttataaacaaaaactacaattttggtcccttaagatttagcccctt 1797299  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    |||  ||||||| | |||  |||||||||||    
T  1797298 tgcaactttgattccttttttcaattttgac 1797268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 20214196 - 20214271
Alignment:
Q  31 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    |||||||||||| ||| |||||||||||||||||||||| ||||||| || |  || ||| |||||||||||||||    
T  20214196 ggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaatttt 20214271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 192
Target Start/End: Original strand, 1015497 - 1015645
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 142  Q
    |||||| ||| ||||||| ||||| || ||||||||||||| |  ||| |||| |||||||||||  ||||||||| |||  |||||||| | |||| ||    
T  1015497 ttttcctcccctaacttttaaaaagttacaattttggccccctgtgtacaaaacctacaattttaaccccctaagaattagtccctttgcatatttggtc 1015596  T
Q  143 cttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||||   ||||||||||  | |||| ||||||||| || ||||||||||    
T  1015597 cttttccccaattttgac-caatcaatgcctacgtgacatgccacatgtg 1015645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 18154513 - 18154569
Alignment:
Q  49 ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    ||||||||||||||||||||| |||||||| |||| |||||| |||||||||||||||    
T  18154513 ccccttaactttcaaaaacttacaattttgacccc-taagtacaaaaactacaatttt 18154569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 33158097 - 33158174
Alignment:
Q  30 aggctaaagtgcattttcc-ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||||| | || |||||| |||||||||||||||    
T  33158097 aggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaatttt 33158174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 5961476 - 5961524
Alignment:
Q  100 caattttagtcccctaagatttaacccctttgcttctttgatccttttg 148  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||||||||    
T  5961476 caattttagccccctaaaatttaacccctttgcatctttgatccttttg 5961524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 20216861 - 20216762
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||| || || ||  || ||||||||||||||| | |||| |||| ||| ||| |||||    
T  20216861 taaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccccaagaattagcccatttgc 20216762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 5730440 - 5730517
Alignment:
Q  30 aggctaaagtgcatttt--ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattt 105  Q
    ||||||||||||| |||  ||||||||||||||||||||||| ||||||||||  | ||||||  ||||| |||||||    
T  5730440 aggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaattt 5730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 25524230 - 25524152
Alignment:
Q  30 aggctaaagtgcatttt--ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    ||||||||||||| |||  |||||| ||| ||| ||||| ||  |||||||||||| |||||| |||||||||||||||    
T  25524230 aggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaatttt 25524152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 34893689 - 34893739
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaatt 104  Q
    |||||||||||||||| |||||||||| || || ||| |||||||||||||    
T  34893689 taactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 2685763 - 2685820
Alignment:
Q  49 ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    |||| ||| ||||||||||||  |||||||| ||| |||||| |||||||||||||||    
T  2685763 ccccctaattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 7e-53; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 18371424 - 18371581
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||||||| | |||||||||||||||| ||||||||||||| |||||| ||||||||||||||| | ||||||||||||| | | ||    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagcacatt 18371523  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccac 187  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18371524 tgcatctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccac 18371581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 7500454 - 7500610
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||  ||  |||||||| |||| |||||||| | ||||||||||||| ||||||    
T  7500454 aggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagcccctt 7500553  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggcca 186  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7500554 tgcatctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggcca 7500610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 7501954 - 7501791
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||| ||||| |||||||| | ||| |||||| || |||||    
T  7501954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagcccct 7501855  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  7501854 ttgcatctttggtccttttggtcaattttgacttattcaatgcctacgtggcaggccacgtgtg 7501791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 30 - 180
Target Start/End: Original strand, 22629482 - 22629636
Alignment:
Q  30 aggctaaagtgcattttcccccct----taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacc 125  Q
    ||||||||||||||||| ||||||    ||| ||||||||||||  |||||||||| | |||||| ||||||||||||||| | ||||||||||||| ||    
T  22629482 aggctaaagtgcatttttccccctcccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagcc 22629581  T
Q  126 cctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggc 180  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  22629582 cctttgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggc 22629636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 22630554 - 22630391
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||| || |||||||||||||||| ||||||||||||| ||| || ||||||||||||||||| ||||||||||| | || ||    
T  22630554 aggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagattcagcctct 22630455  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||  |||||| ||||||||||||||||||||||||||||||| || |||| ||||||| ||||    
T  22630454 ttgtatctttggtccttttggtcaattttgacttattcaacgcttatgtggtaggccacgtgtg 22630391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 43 - 180
Target Start/End: Complemental strand, 18372544 - 18372408
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 142  Q
    ||||||||||| || |||||||||||| ||||||||||||| |||||| ||||||||||||||| | ||||||||||||| ||||||||  |||||| ||    
T  18372544 ttttcccccct-aattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcccctttgtatctttggtc 18372446  T
Q  143 cttttggtcaattttgacttattcaacgcctacgtggc 180  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  18372445 cttttggtcaattttgacttattcaacgtctatgtggc 18372408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 31659622 - 31659785
Alignment:
Q  31 ggctaaagtgcatttt--ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    |||||||||||| |||  |||||| |||||||||||||||| |||||||| |||| |||||| ||||||||||||||| | ||||||||||||| ||||     
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcccca 31659721  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||   ||||||||||||||||||||||||| || ||||||| | ||||||| ||||| ||||    
T  31659722 ttgcaaatttgatccttttggtcaattttgacatagtcaacgcatgcgtggcatgccacgtgtg 31659785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 47369805 - 47369943
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 153  Q
    |||||||||||||||| ||||||| ||| |||||||| |||||||| |||||| | ||| ||||||||| ||||||||| |||||  |  ||||||||||    
T  47369805 taactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagcccctttgcatctttagttattttggtcaa 47369904  T
Q  154 ttttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  47369905 ttttgacttattcaacgcctatgtggcaggccacgtgtg 47369943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 3227696 - 3227533
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| ||||     
T  3227696 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcacccctaagatttagcccca 3227597  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||  ||||| |||||||| ||||||||||| || |||||||  |  ||||| ||||||||||    
T  3227596 ttgcaactttggtccttttgatcaattttgacctagtcaacgctgatttggcatgccacatgtg 3227533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 42886384 - 42886257
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| ||||| || | ||||||||||||| || |||||||| |||| ||| || ||||||||||||||||| ||||||||||||| ||| |||||    
T  42886384 taaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagcccatttgc 42886285  T
Q  133 ttctttgatccttttggtcaattttgac 160  Q
     ||||||||| |||||||||||||||||    
T  42886284 atctttgatcattttggtcaattttgac 42886257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 33 - 186
Target Start/End: Original strand, 46482599 - 46482753
Alignment:
Q  33 ctaaagtgcattttccccc-cttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 131  Q
    |||||||||||||| | || | ||| ||||||||| ||  || |||| |||| || ||| |||||||| ||||||| |||||||||||||| | ||||||    
T  46482599 ctaaagtgcatttttctcctcctaattttcaaaaatttgtaaatttgaccccctatgtacaaaaactataattttaatcccctaagatttatctcctttg 46482698  T
Q  132 cttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggcca 186  Q
    | | ||| ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  46482699 cattttttatccttttggtcaattttgacttattcaatgcctacgtggcaagcca 46482753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 33 - 192
Target Start/End: Original strand, 17781663 - 17781823
Alignment:
Q  33 ctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 131  Q
    |||||||||| |||||||||| |||||||||||||||| |||||||| |||| ||||||  ||||| ||||||| |  ||||||||||||| |||| |||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattg 17781762  T
Q  132 cttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |  ||||| ||||||||  ||||||||||  | |||||||| |  ||||| ||||||||||    
T  17781763 caactttggtccttttgaccaattttgaccaagtcaacgccgatttggcatgccacatgtg 17781823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 30439459 - 30439320
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| |||| |||||||||||||||||| || | ||||||    | || ||  ||||||||||||||||||||||||||||||| ||||||    
T  30439459 aggctaaagtgcactttctccccttaactttcaaaaagttacgattttgatttcctatgttcaaaaactacaattttagtcccctaagatttagcccctt 30439360  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaac 169  Q
    |||  ||| | || ||||| |||||||||||||| |||||    
T  30439359 tgcaccttcggtcattttgctcaattttgacttagtcaac 30439320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 31949321 - 31949484
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||| || ||| |||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| ||||     
T  31949321 aggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 31949420  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||  ||||| |||||||| ||||||||||| || |||||||  |  ||||| ||||||||||    
T  31949421 ttgcaactttggtccttttgatcaattttgacctagtcaacgctgatttggcatgccacatgtg 31949484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 31949904 - 31949762
Alignment:
Q  30 aggctaaagtgcatt-ttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| | |||||||| |||||||||||||||| ||||||||||||| ||| ||  ||||| |||||||    ||||||||||||| ||||     
T  31949904 aggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcacccctaagatttagcccca 31949805  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgc 171  Q
    ||||  ||||| |||||||| ||||||||||| || |||||||    
T  31949804 ttgcaactttggtccttttgatcaattttgacctagtcaacgc 31949762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 47525468 - 47525306
Alignment:
Q  31 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| ||| |||||| |||||||||||||||| ||||||| ||||| ||||||| ||||| |||||||    ||||||||||||| |||| |    
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagccccat 47525369  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||  ||||| ||||||||  |||||||||| || |||||||  |  ||||| ||||||||||    
T  47525368 tgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 47525306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 127336 - 127476
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| ||||| |||||||||||||||| ||||||||| ||| ||||||  ||||| |||| ||||| ||||||||||||| |||  |    
T  127336 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaa-tttagccccctaagatttagcccaat 127434  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgc 171  Q
    |||  ||||| ||||||||  |||||||||| || |||||||    
T  127435 tgcaactttggtccttttgaccaattttgacctagtcaacgc 127476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 3227109 - 3227269
Alignment:
Q  32 gctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccc-taagatttaaccccttt 130  Q
    ||||||||||| ||||||||| ||| |||||||||||| ||||||||||||| ||||||  ||||| |||| ||||| |||| ||||||||| |||| ||    
T  3227109 gctaaagtgcactttccccccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaa-tttagcccccttaagatttagccccatt 3227207  T
Q  131 gcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||  ||||| ||||||||  |||||||||| || |||||||  |  ||||| ||||||||||    
T  3227208 gcaactttggtccttttgaacaattttgacctagtcaacgctgatttggcatgccacatgtg 3227269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 14999249 - 14999126
Alignment:
Q  36 aagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttc 135  Q
    ||||||| ||| ||||| ||| |||||||| ||| |||||||| |||| ||| || ||||||||||||||| |  |||||||||||| ||||||||| ||    
T  14999249 aagtgcacttttcccccctaattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgcatc 14999151  T
Q  136 tttgatccttttggtcaattttgac 160  Q
    |||| |||||| |||||||||||||    
T  14999150 tttgttcctttaggtcaattttgac 14999126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 31661111 - 31660970
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||| || ||||||||||||| || |||||||| |||  || ||| |||||||| |||||||||||||||| |||||||| |     
T  31661111 aggctaaagtgcactttcccctctctaactttcaaaaatttgcaattttgaccctttacgtacaaaaactataattttagtcccctaaaatttaacctca 31661012  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgc 171  Q
    ||||   ||||||||||||||  ||||||||| || |||||||    
T  31661011 ttgcaaatttgatccttttgg-gaattttgacctagtcaacgc 31660970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 21505415 - 21505542
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| |||||| |||||||||||| || | |||||||||||  |  || |||||||||||||||   ||| ||||||||| ||||||    
T  21505415 aggctaaagtgcacttttccccct-aactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagcccctt 21505513  T
Q  130 tgcttctttgatccttttggtcaattttg 158  Q
    ||| |||||| ||||||||| ||||||||    
T  21505514 tgcatctttggtccttttggacaattttg 21505542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 11658378 - 11658480
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    |||||||| |||| ||||||||||||||||||||||||| | ||||||| ||||| || ||| ||||||||||||||| |||||  |||| ||| |||||    
T  11658378 aggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttggtccctcaagaattagcccct 11658477  T
Q  129 ttg 131  Q
    |||    
T  11658478 ttg 11658480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 17782655 - 17782562
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 122  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    |||||||||||||    
T  17782655 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagattta 17782562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 43900565 - 43900442
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 153  Q
    ||||||| ||||| ||  ||||||||  || ||| ||||||||||||| |||| | |||| || ||||| | | ||||| ||||||||||||||| ||||    
T  43900565 taacttttaaaaatttgtaattttggttccctaaatataaaaactacagtttt-gcccccaaaaatttatctcatttgcatctttgatccttttgatcaa 43900467  T
Q  154 ttttgacttattcaacgcctacgtg 178  Q
    |||| | ||||||||||||||||||    
T  43900466 ttttaatttattcaacgcctacgtg 43900442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 11662649 - 11662550
Alignment:
Q  34 taaagtgcatttt-ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| || |  || ||| |||||||| |||||| | |||| |||| ||| |||||||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccccaagaattagcccctttgc 11662550  T

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Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 14998048 - 14998107
Alignment:
Q  98 tacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaatttt 157  Q
    ||||||||| | ||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  14998048 tacaattttggccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 14998107  T

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Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 769413 - 769543
Alignment:
Q  31 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| ||| || ||| ||| |||||||||||| |||||||| |  | |||||| ||||| || |||||| |  |||| ||| ||||||| ||    
T  769413 ggctaaagtgcaattttccacctgtaattttcaaaaacttgcaattttgacatcctaagtacaaaaattataattttggctcccttagaattaacccatt 769512  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    ||| |||||||||||||||  ||||||||||    
T  769513 tgcatctttgatccttttgcccaattttgac 769543  T

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Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 770791 - 770732
Alignment:
Q  101 aattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgac 160  Q
    |||||| | ||||||| ||||| ||||||||| ||||||||| |||||||||||||||||    
T  770791 aattttggccccctaaaatttagcccctttgcatctttgatcattttggtcaattttgac 770732  T

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Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 6618231 - 6618369
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 153  Q
    |||||||  ||||||| ||||||||   || ||| |||||||| |||||||||    |||||||||||  || | ||||   ||||||| ||||| ||||    
T  6618231 taacttttcaaaacttgcaattttgattccttaaatataaaaattacaattttgactccctaagattttgcctcattgcaaatttgatcattttgatcaa 6618330  T
Q  154 ttttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||||| || |||||||||| |||||| ||||||||||    
T  6618331 ttttgacctagtcaacgcctatgtggcatgccacatgtg 6618369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 34174084 - 34174010
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatt 104  Q
    ||||||||||||| ||| ||||| || ||||||||| ||| ||||||||||||| ||||||  ||||| ||||||    
T  34174084 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 48935004 - 48934902
Alignment:
Q  31 ggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||||||| || ||| ||||||||||||||||  ||||||| |||  |||||| |||||||| ||||||  ||||| |||| ||| ||| ||    
T  48935004 ggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttgatcccccaagaattagcccatt 48934905  T
Q  130 tgc 132  Q
    |||    
T  48934904 tgc 48934902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 20163658 - 20163585
Alignment:
Q  30 aggctaaagtgcattt-tccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaa 102  Q
    ||||||||||||| || ||| ||| |||||||||||||||| |||||||||| || || ||| |||||||||||    
T  20163658 aggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 47524538 - 47524599
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatt 104  Q
    |||||||||  |||||||||||||||| ||||||||||||| ||||||  ||||| ||||||    
T  47524538 ttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 21508504 - 21508453
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccc 82  Q
    ||||||||||||||||| |||| |||||||||||||| || ||||||||||||    
T  21508504 aggctaaagtgcatttttcccc-ttaactttcaaaaagtttcaattttggccc 21508453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 128699 - 128572
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| ||||||| || ||||||||||||| || |||||||| |||| ||||||  ||||| |||||||    ||||||||||| | |||| ||||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattcagccccattgc 128600  T
Q  133 ttctttgatccttttggtcaattttgac 160  Q
      |||||| ||||||   ||||||||||    
T  128599 aactttgacccttttaaccaattttgac 128572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 34351496 - 34351584
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 122  Q
    |||||||||||||||    |||| | |||||||||||||| |||||||||| |   ||||||| ||||||||||||||  ||| |||||||||    
T  34351496 aggctaaagtgcatt----ccccctgactttcaaaaacttgcaattttggctctccaagtatagaaactacaattttaaccccttaagattta 34351584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 34352888 - 34352757
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||  | ||| ||| |||||||||||| | ||||||| ||| |||||| | |||||| |||||| | || |||||||||||||       
T  34352888 aggctaaagtgcactttttcacctctaattttcaaaaactttctattttggtcccttaagtacataaactataattttggccctctaagatttaacctta 34352789  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  |||| ||| |||||| ||||||||||    
T  34352788 ttgcaactttaatcattttggccaattttgac 34352757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 597382 - 597309
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    ||||||| ||||||||| ||||  ||||||||||||||||  ||||||| | | ||||||| |||||||||||||||    
T  597382 aggctaatgtgcatttttcccc--taactttcaaaaacttgaaattttgacgc-ataagtacaaaaactacaatttt 597309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 1e-51; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 1290300 - 1290137
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||||    
T  1290300 aggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaacccct 1290201  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| ||||||||||||||||||||  | |||||||||| |||||| ||||||||||    
T  1290200 ttgcatctttggtccttttggtcaattttgaccgagtcaacgcctaagtggcatgccacatgtg 1290137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 12129626 - 12129785
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||||   ||| ||||||||| ||| |||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttgc 12129725  T
Q  133 ttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
     |||||| || ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  12129726 atctttggtcattttgatcaattttgacttattcaacgcctacgtggcaggccacgtgtg 12129785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 8155741 - 8155899
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggc-cccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| ||| |||||| ||||||||||||||| ||||||| || ||| |||||  ||||||||||||||| | ||||||||||||| || ||||||    
T  8155741 taaagtgcacttttccccct-aactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgctttgc 8155839  T
Q  133 ttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
     |||||  || |||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  8155840 atctttagtcattttggtcaactttgacttattcaacgcctacgtagcaggccacgtgtg 8155899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 1835204 - 1835041
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||  || |||||||||||||||| |||||||| |||| ||||||| ||||||||||||||   ||||||||||||| |||||    
T  1835204 aggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccct 1835105  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| ||||||| | ||||||||||||  ||||||| ||  ||||| ||||| ||||    
T  1835104 ttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtg 1835041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 33 - 160
Target Start/End: Complemental strand, 19750673 - 19750546
Alignment:
Q  33 ctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    |||||||||| ||| ||||| ||||||| |||||||| ||||||||||||| |||||| ||||||||||||||||  ||||||||||||| |||| ||||    
T  19750673 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19750574  T
Q  133 ttctttgatccttttggtcaattttgac 160  Q
       ||||||||||||||||| |||||||    
T  19750573 aaatttgatccttttggtcacttttgac 19750546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 19789133 - 19789260
Alignment:
Q  33 ctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    |||||||||| ||| ||||| ||||||| |||||||| ||||||||||||| |||||| ||||||||||||||||  ||||||||||||| |||| ||||    
T  19789133 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19789232  T
Q  133 ttctttgatccttttggtcaattttgac 160  Q
       ||||||||||||||||| |||||||    
T  19789233 aaatttgatccttttggtcacttttgac 19789260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 31599788 - 31599919
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||| ||||||| |||| ||||| ||||||| |||||||| |||||||| |||| |||||| ||||||||||||||| ||||||||||||||| |||||    
T  31599788 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcccct 31599887  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  ||||||||||||| | ||||||||||    
T  31599888 ttgcaactttgatcctttttgccaattttgac 31599919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 13509460 - 13509298
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||| | ||| ||||| ||||||| ||||| || |||||||||||||  |||||| ||||||||||||||  |||||||||||||| ||||||    
T  13509460 aggctaaagtgtacttttcccccctaacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagcccctt 13509361  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||  ||||| ||||||||| ||||||||||  | ||||||| |  |||||| ||||||||||    
T  13509360 tgcacctttgctccttttggccaattttgaccaagtcaacgcatgtgtggcatgccacatgtg 13509298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 187
Target Start/End: Original strand, 1289110 - 1289254
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 142  Q
    |||||||||||||||||||||| | ||  |||||||  ||  |||||||||||||||||||||||| | | |||||||||||||| |||| |||||| ||    
T  1289110 ttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaattttagcctcttaagatttaacccccttgcatctttggtc 1289209  T
Q  143 cttttggtcaattttgacttattcaacgcctacgtggcaggccac 187  Q
    ||||||||||||||||||  | ||||||| || |||||| |||||    
T  1289210 cttttggtcaattttgaccgagtcaacgcttaagtggcatgccac 1289254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 1834119 - 1834250
Alignment:
Q  31 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttag-tcccctaagatttaacccct 128  Q
    |||||||||||| ||| |||||| ||||||| |||||||| |||||||| |||| || ||||||||||||||||||| |  ||||||||||||| ||| |    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagcccat 1834218  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    |||| |||||| ||||||||||||||||||||    
T  1834219 ttgcatctttggtccttttggtcaattttgac 1834250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 8757674 - 8757804
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| |||  ||||||||||||||||||||| ||||||| ||||| |||||| | ||||||||||||| | ||| ||||||||| |||| |    
T  8757674 aggctaaagtgcactttttccccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagatttagccccat 8757773  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    |||   ||| |||||||||||||||||||||    
T  8757774 tgcaattttaatccttttggtcaattttgac 8757804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 10471489 - 10471327
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| |||| |    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 10471390  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||  ||||| ||||||||  |||||||||| || |||||||  |  ||||| ||||||||||    
T  10471389 tgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 10471327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 49308128 - 49307999
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| ||||| |||||||||||||||| ||||||||||||| |||||| ||||||||||||||| | |||||| |||||  |||||     
T  49308128 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt-gccccctatgattttgcccctg 49308030  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
     || |||||| |||||| |||||||||||||    
T  49308029 cgcatctttggtcctttgggtcaattttgac 49307999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 43 - 159
Target Start/End: Complemental strand, 8758925 - 8758809
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 142  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||| | ||||||||||||| | ||| ||||||||| | || ||||   ||| |||    
T  8758925 ttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagctccattgcaattttaatc 8758826  T
Q  143 cttttggtcaattttga 159  Q
    |||||||||||||||||    
T  8758825 cttttggtcaattttga 8758809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 1963195 - 1963298
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||||||||||||||||| || ||||||||||| | || ||| ||||||||||||||||| ||||||||| ||| |||||    
T  1963195 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagcccct 1963294  T
Q  129 ttgc 132  Q
    ||||    
T  1963295 ttgc 1963298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 10447006 - 10447168
Alignment:
Q  31 ggctaaagtgca-ttttccccc-cttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    |||||||||||| ||||||||| ||||| ||||||||| || ||||||| ||||| || ||| |||||| |||||||||  ||||||||||||| |||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccct 10447105  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| |||||||||  |||||| ||  | |||| |||||||||||| ||||| ||||    
T  10447106 ttgcatctttggtccttttggctaattttaac-cagtcaatgcctacgtggcacgccacgtgtg 10447168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 25685924 - 25685761
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| ||||     
T  25685924 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagcccca 25685825  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||  ||||| ||||||||  |||||||||| || |||||||  |  ||||| ||||||||||    
T  25685824 ttgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 25685761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 52491709 - 52491578
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||| | |||||| |||||||||||||||||||| ||||||||| ||  ||| || | ||||||||||||| | ||||||| ||||| ||||     
T  52491709 aggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttagcccca 52491610  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  |||| |||||||||||||||||||||    
T  52491609 ttgcaactttaatccttttggtcaattttgac 52491578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 17382992 - 17383154
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| | ||| |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||| | |||| |||| ||| ||||||    
T  17382992 aggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccccaagaattatcccctt 17383091  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||     |  |||||| |||||||||||||||  ||||||||||  |||||| |||| ||||    
T  17383092 tgcaatagtagtcctttaggtcaattttgacttggtcaacgcctatatggcagaccacctgtg 17383154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 17388312 - 17388150
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| ||||| |||||||||||||||| ||||||||| ||| |||||| | ||||||||||||| | |||| |||| ||| ||||||    
T  17388312 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccccaagaattagcccctt 17388213  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    | |     |  |||||| |||||||||||||||  ||||||||||  ||||||||||| ||||    
T  17388212 tacaatagtagtcctttaggtcaattttgacttggtcaacgcctatatggcaggccacgtgtg 17388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 31601086 - 31600956
Alignment:
Q  31 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||  ||||| ||||||| |||||||| |||||||| |||| |||||| |||||||||||||||   ||| ||||||||| ||| ||    
T  31601086 ggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagcccatt 31600987  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    |||  ||||||||||||| ||||||||||||    
T  31600986 tgcaactttgatcctttttgtcaattttgac 31600956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 10448362 - 10448200
Alignment:
Q  30 aggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| || ||| ||| ||| ||||||||| || | ||||| ||||| || ||| ||||||||||||||| | || ||||||| || |||||    
T  10448362 aggctaaagtgcacttcccctcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagcccct 10448263  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| ||||||||| ||||||||||  | |||| |||||||||||| ||||| ||||    
T  10448262 ttgcatctttggtccttttggccaattttgac-cagtcaatgcctacgtggcatgccacgtgtg 10448200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 10470545 - 10470676
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||  ||||||  ||||  |||||||    ||||||||||||| ||||     
T  10470545 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagcccca 10470644  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  ||||| |||||||| |||||||||||    
T  10470645 ttgcaactttggtccttttgatcaattttgac 10470676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 35935631 - 35935504
Alignment:
Q  34 taaagtgcattttcccccc-ttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| ||||||||| |||||||| ||||| || ||||||| ||||| |||||| | ||||||||||||| | ||||||||||||| || | ||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagatttagcctcattgc 35935532  T
Q  133 ttctttgatccttttggtcaattttgac 160  Q
      |||| |||||||||| ||||||||||    
T  35935531 aactttaatccttttggccaattttgac 35935504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 5525359 - 5525489
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||| |||||| ||||| |||||||||||||||| |||||||| |||| ||||||  ||||| |||||||    ||||||||||||| |||| |    
T  5525359 aggctaaagtacatttttcccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 5525458  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    |||  ||||| ||||||||  ||||||||||    
T  5525459 tgcaactttggtccttttgaccaattttgac 5525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 5526227 - 5526065
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| ||||  |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| |||| |    
T  5526227 aggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagccccat 5526128  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||   |||| ||||||||  |||||||||| || |||||||  |  ||||| ||||||||||    
T  5526127 tgcaattttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 5526065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 25684934 - 25685064
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||| |||  ||||||  ||||| |||||||    ||||||||||||| |||| |    
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagccccat 25685033  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    |||  ||||| |||||||| |||||||||||    
T  25685034 tgcaactttggtccttttgatcaattttgac 25685064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 13386635 - 13386503
Alignment:
Q  30 aggctaaagtgca--ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 127  Q
    |||||||||||||  |||||||||| |||||||||||||||| |||||||| |||||||||||  ||||| |||||||    |||||||||| || ||||    
T  13386635 aggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagatctagcccc 13386536  T
Q  128 tttgcttctttgatccttttggtcaattttgac 160  Q
     ||||  ||||| ||||||||  ||||||||||    
T  13386535 attgcaactttggtccttttgaccaattttgac 13386503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 1964542 - 1964440
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||||| ||||||||||| ||||| || ||||||||||||| || | | ||||||||||||||| ||||| ||||| ||| ||||||    
T  1964542 ggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttggtcccttaagaattatcccctt 1964443  T
Q  130 tgc 132  Q
    |||    
T  1964442 tgc 1964440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 26421723 - 26421562
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| ||||  |||||||||||||||| |||||||| || | |||||| |||||||||||||||   ||| |||||||| | ||| |    
T  26421723 aggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagattt-agcccat 26421625  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||   ||||||| |||| ||||||||| |  || ||||||||| ||||||| ||||| ||||    
T  26421624 tgcaaatttgatcattttagtcaattttaaaatagtcaacgcctgcgtggcatgccacgtgtg 26421562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 13386013 - 13386178
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaa-cttccaattttggccccataagtataaaaactacaattt-tagtcccctaagatttaaccc 126  Q
    ||||||||||||| ||| |||||| ||||||||||||| ||| ||||||||||||| ||||||  ||||| ||||||| |   ||||||||||||| ||     
T  13386013 aggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttagcct 13386112  T
Q  127 ctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    | ||||  ||||| |||||||| ||||||||||| || |||||||  |  ||||| ||||||||||    
T  13386113 cattgcaactttggtccttttgatcaattttgacctagtcaacgctgatatggcatgccacatgtg 13386178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 55602379 - 55602459
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccct 114  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||| | ||  ||  ||||||||||||||||||||||||||    
T  55602379 taaagtgcatttttcccctttaactttcaaaaacttgcaattttagtcctctatatataaaaactacaattttagtcccct 55602459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 33296251 - 33296350
Alignment:
Q  58 tttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaatttt 157  Q
    ||||||||||||  |||||||| | | ||||||||||||||| |||||| ||||||||  ||||| | | ||||| ||||||||| ||||||||||||||    
T  33296251 tttcaaaaacttataattttggtctcctaagtataaaaactataattttggtcccctataatttagctcatttgcatctttgatcattttggtcaatttt 33296350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 34 - 181
Target Start/End: Original strand, 35934347 - 35934492
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    ||||||||| ||| |||||| |||||||||||||||  |||||||| ||| |||||| | ||| || |||||| | ||| ||||||||| |||| ||||     
T  35934347 taaagtgcacttttccccct-aactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagatttagccccattgca 35934445  T
Q  134 tctttgatccttttggtcaattttgacttattcaacgcctacgtggca 181  Q
     |||| || ||||||||||||||||||  | |||| ||||||||||||    
T  35934446 actttaattcttttggtcaattttgac-cagtcaatgcctacgtggca 35934492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 48780247 - 48780366
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||| ||||||| |||||||| |||||||| |||| ||||||  ||||| |||||||    ||||||||||||| ||||     
T  48780247 aggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 48780346  T
Q  129 ttgcttctttgatccttttg 148  Q
    ||||  ||||| ||||||||    
T  48780347 ttgcaactttggtccttttg 48780366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 21539159 - 21539065
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctt 137  Q
    |||||| ||||||| ||| |||||||| ||||||||||| | ||||| ||||||||||||||||   ||||||||||||| | ||||||| ||||    
T  21539159 ttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagctcctttgcatctt 21539065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 37728662 - 37728536
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    |||||||||||||  || | ||||||| ||||| || ||||||||||| | || ||| |||||||||||||||   ||  ||||||||| |  ||||||     
T  37728662 taaagtgcattttttcctcctaacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttgaccctttaagatttagcttctttgca 37728563  T
Q  134 tctttgatccttttggtcaattttgac 160  Q
    |||||||||||||| ||||||||||||    
T  37728562 tctttgatccttttagtcaattttgac 37728536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 14868889 - 14869019
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| ||||| || ||||||||| ||| ||||||||||||  ||||||| ||||| |||| |||   ||||||||| ||| |||| |    
T  14868889 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaa-tttccccccctaagaattagccccat 14868987  T
Q  130 tgcttctttgatccttttggtcaattttgact 161  Q
    ||||| |||  |||||||| || |||||||||    
T  14868988 tgcttatttcgtccttttgctctattttgact 14869019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 14877045 - 14876915
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| ||||| || ||||||||| ||| ||||||||||||  ||||||| ||||| |||| |||   ||||||||| ||| |||| |    
T  14877045 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaa-tttccccccctaagaattagccccat 14876947  T
Q  130 tgcttctttgatccttttggtcaattttgact 161  Q
    ||||| |||  |||||||| || |||||||||    
T  14876946 tgcttatttcgtccttttgctctattttgact 14876915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 21177996 - 21178127
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||| | ||||||||| ||||||||| ||| || ||||||||  ||| || | | |||||||||||||||   ||||||| ||||| ||| ||    
T  21177996 aggctaaagtgtactttccccccctaactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagcccttt 21178095  T
Q  130 tgcttctttgatccttttggtcaattttgact 161  Q
    |||  |||||||| |||| | |||||||||||    
T  21178096 tgcaactttgatcatttttgccaattttgact 21178127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 50909774 - 50909643
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccct-aagatttaacccct 128  Q
    |||||||||||| |||| || || ||| ||| ||||| || | |||||| | || || |||||||||||||||||||   ||||| |||||||| |||||    
T  50909774 ggctaaagtgcactttttccaccctaagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagcccct 50909675  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    |||| |||||| |||||||| |||||||||||    
T  50909674 ttgcatctttggtccttttgatcaattttgac 50909643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 162
Target Start/End: Complemental strand, 3928960 - 3928827
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||| ||||||||||||  || | ||||||||||| || |||| ||||| |||||||| | || ||| | |||| |||||    
T  3928960 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccctctatgttttagcccct 3928861  T
Q  129 ttgcttctttgatccttttggtcaattttgactt 162  Q
    |||| | ||   ||||||| | ||||||||||||    
T  3928860 ttgcattttcagtccttttaggcaattttgactt 3928827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 46638817 - 46638696
Alignment:
Q  39 tgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttcttt 138  Q
    |||||||| || |||||||||||||||| ||  |||||||  ||| || | | ||||| ||||||||||| |||||||||||||  ||||||||  ||||    
T  46638817 tgcatttttcctccttaactttcaaaaagttggaattttgatcccctatgaacaaaaattacaattttagccccctaagatttagtccctttgcaacttt 46638718  T
Q  139 gatccttttggtcaattttgac 160  Q
      || ||||| |||||||||||    
T  46638717 agtctttttgatcaattttgac 46638696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 2412958 - 2412863
Alignment:
Q  92 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccac 187  Q
    |||||||||||||||||| |   |||||||| | || ||||   |||||||||||| ||||||||||||||| ||||| ||| ||||||| |||||    
T  2412958 aaaaactacaattttagttcttaaagatttagctccattgcaaatttgatccttttagtcaattttgacttaatcaacacctgcgtggcatgccac 2412863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 26420324 - 26420410
Alignment:
Q  39 tgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccc 126  Q
    |||| ||||||||  || ||||||||||||| ||||||||| ||| |||||||||||| || ||||||||| || | |||||||||||    
T  26420324 tgcactttccccctatatctttcaaaaacttgcaattttggtccc-taagtataaaaattataattttagttcctttagatttaaccc 26420410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 3927665 - 3927798
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| ||||||| ||||  || | |||||||||||  | |||| |||||||||||||| |||| ||| | |||| ||| |    
T  3927665 aggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaattttggtcctctatgttttagcccat 3927764  T
Q  129 ttgcttctttgatccttttggtcaattttgactt 162  Q
    |||| | ||   ||||||||| ||||||||||||    
T  3927765 ttgcattttcagtccttttgggcaattttgactt 3927798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 49306774 - 49306850
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    ||||||||||||| |||   |||  ||||||||||||||| |||||||||||   |||||| |||||||||||||||    
T  49306774 aggctaaagtgcacttttttcccccaactttcaaaaacttgcaattttggccatttaagtacaaaaactacaatttt 49306850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 27258057 - 27257960
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 131  Q
    |||| |||| |||| |||||||||||| ||||| || |||||||| |||  ||  || ||||||| ||||||||  ||| ||||||||| ||||||||    
T  27258057 taaaatgcactttctccccttaacttttaaaaagttgcaattttgaccctctatatacaaaaactccaattttaaccccttaagatttagcccctttg 27257960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 48781147 - 48781007
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| ||||||||||||| || ||||||||| ||| ||||||  ||||| |||||||    ||||||| ||||| ||||     
T  48781147 aggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttggtccc-taagtactaaaaccacaatttagcccccctaaaatttagcccca 48781049  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacg 170  Q
    ||||  ||||| || |||||   ||||||||| || ||||||    
T  48781048 ttgcaactttggtcattttgacaaattttgacctagtcaacg 48781007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 12700174 - 12700335
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||||||   |||||| |||||| || | |    
T  12700174 aggctaaagtgcactttcccccct-aactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgatttagccacat 12700272  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12700273 tgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 12700335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 30 - 187
Target Start/End: Original strand, 7758401 - 7758559
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  7758401 aggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaacccct 7758500  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccac 187  Q
    |||  |||||| |||||||||||||||||||| || ||||||| || |||||| |||||    
T  7758501 ttgtatctttggtccttttggtcaattttgacctagtcaacgcttaagtggcatgccac 7758559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 47614185 - 47614347
Alignment:
Q  31 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||  ||||| |||||||||||||||| ||||||||||||| ||||||| ||||| |||||||| | ||||||||||||| || |||    
T  47614185 ggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcctctt 47614284  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||| |||||| | |||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  47614285 tgcatctttggtgcttttggttaattttgacttattcaacgcctacgtggcaggccacgtgtg 47614347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 54540892 - 54540761
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||| | ||||||||||||| |||||    
T  54540892 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagcccct 54540793  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  ||||||||||||| ||||||||||||    
T  54540792 ttgcaactttgatcctttttgtcaattttgac 54540761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 19984848 - 19985010
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||| ||| |||||||||||| ||||||||||||| || ||| |||||||||||||||   ||  |||||||||||||||    
T  19984848 aggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccct 19984947  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| ||||||||||||||||||||  | |||| |||||||||||| ||||||||||    
T  19984948 ttgcatctttggtccttttggtcaattttgac-cagtcaatgcctacgtggcatgccacatgtg 19985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 49 - 192
Target Start/End: Complemental strand, 34019227 - 34019084
Alignment:
Q  49 ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttg 148  Q
    ||||||||||||||||||||| |||||||| |||| || ||| ||| ||||||||||| ||||||||| ||||| | | ||||| |||||| ||||||||    
T  34019227 ccccttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagctcatttgcatctttggtccttttg 34019128  T
Q  149 gtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||    
T  34019127 gtcaattttgatttattcaacgcctacgtgacaggccacgtgtg 34019084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 8875905 - 8876068
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||| |||||||| ||  |||||  | ||||||| ||||| || ||| ||||||||||||||| | ||||||||||||| ||  |    
T  8875905 aggctaaagtgcacttttcaccccttaagttcgaaaaagctgcaattttagccccttatgtacaaaaactacaattttggccccctaagatttagccaat 8876004  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| | |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8876005 ttgcatatttggtccttttagtcaattttgacttattcaacgcctacgtggcaggccacatgtg 8876068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 46719941 - 46720070
Alignment:
Q  31 ggctaaagtgcatttt-ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||||||| |||||||||||||| ||||| || | ||||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||    
T  46719941 ggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaattttagtcctctaagatttagcccatt 46720040  T
Q  130 tgcttctttgatccttttggtcaattttga 159  Q
    ||| | |||| |||||||||||||||||||    
T  46720041 tgcatatttggtccttttggtcaattttga 46720070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 7267647 - 7267773
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||||||| |||||| | ||||||||||||| | ||||||||||||| || | ||||     
T  7267647 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagcctcattgca 7267746  T
Q  134 tctttgatccttttggtcaattttgac 160  Q
     |||| |||||||||||||||||||||    
T  7267747 actttaatccttttggtcaattttgac 7267773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 12703601 - 12703439
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| |||  |||  ||||||||||||| ||  |||||||||||| |||||| ||||||||||||||| | |||||| |||||| |||| |    
T  12703601 aggctaaagtgcactttttccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccat 12703502  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||| |||||| || |||||   ||||||||||||||||||||||||||||||| |||| ||||    
T  12703501 tgcatctttggtcattttgaataattttgacttattcaacgcctacgtggcagaccacgtgtg 12703439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 55192096 - 55191967
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||| | |||  |||| ||||||||||    
T  55192096 aggctaaagtgtattttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccctt 55191997  T
Q  130 tgcttctttgatccttttggtcaattttga 159  Q
    |||   ||||||| |||| |||||||||||    
T  55191996 tgcaattttgatcatttttgtcaattttga 55191967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 23770505 - 23770346
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| ||||| |||||||| ||| ||||| || ||||||||| ||| || ||| ||||||||||||||||| |||||||||||||||||||||||    
T  23770505 taaagtgcaattttctccccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactacaattttagccccctaagatttaacccctttgc 23770406  T
Q  133 ttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
     |||||  ||||||||||||| ||||||  | ||||||| || |||||| ||||| ||||    
T  23770405 atctttagtccttttggtcaactttgaccaagtcaacgcatatgtggcatgccacgtgtg 23770346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 19986174 - 19986010
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggcccca--taagtataaaaactacaattttagtcccctaagatttaaccc 126  Q
    ||||||||||||| |||||||| ||||| |||||||||||| |||||||||||||   || |||||||||||||||||||   || ||||||||||||||    
T  19986174 aggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccctctaagatttaaccc 19986075  T
Q  127 ctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||||| |||||| || ||| |||||||||||||  | |||| |||||||||||| ||||| ||||    
T  19986074 ctttgcatctttggtcatttcggtcaattttgac-cagtcaatgcctacgtggcatgccacgtgtg 19986010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 8456479 - 8456639
Alignment:
Q  32 gctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 131  Q
    ||||||||||| |||  |||| ||| |||||||||||| ||||||||| ||| ||| || ||||||||||||||| | ||||||||||||| || | |||    
T  8456479 gctaaagtgcactttttccccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagatttagcctcattg 8456578  T
Q  132 cttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |   |||||||||||| |||||||||||| || ||||||||| ||||||| ||||| ||||    
T  8456579 caaatttgatccttttagtcaattttgacctagtcaacgcctgcgtggcatgccacgtgtg 8456639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 47615608 - 47615516
Alignment:
Q  100 caattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||||| | ||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  47615608 caattttggccccctaagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaatgcctacgtggcaggccacgtgtg 47615516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 173
Target Start/End: Complemental strand, 11671442 - 11671299
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| |||  || | |||||||||||||||| ||||||| ||||| ||| |||||||||||||  |||   |||||| |||||||||||||    
T  11671442 aggctaaagtgcactttttccgcctaactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgatttaacccctt 11671343  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcct 173  Q
    | | |||||| |||||||| |||||||||| |||||||||||||    
T  11671342 tacatctttggtccttttgatcaattttgatttattcaacgcct 11671299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 43 - 192
Target Start/End: Original strand, 11670397 - 11670546
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 142  Q
    |||| ||| ||||| ||||||||| || ||||||| | ||| ||||||||||||||| |||||| ||||| || ||||||  ||| |||| | |||  ||    
T  11670397 tttttcccgcttaattttcaaaaatttgcaattttagtcccctaagtataaaaactataattttggtcccttatgatttagtcccattgcattttttgtc 11670496  T
Q  143 cttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  11670497 cttttgatcaattttgacttattcaacgcttacgtggcaggccacgtgtg 11670546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 29931225 - 29931369
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| ||| |||||||||||||||| ||||||| ||||| ||| || ||||||||||||||| | |||||||||||||||||||    
T  29931225 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccct 29931324  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcct 173  Q
    ||||     |  ||||||||||||||||||||  | |||||||||    
T  29931325 ttgcaataatagtccttttggtcaattttgacacagtcaacgcct 29931369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 29980379 - 29980523
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| ||| |||||||||||||||| ||||||| ||||| ||| || ||||||||||||||| | |||||||||||||||||||    
T  29980379 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccct 29980478  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcct 173  Q
    ||||     |  ||||||||||||||||||||  | |||||||||    
T  29980479 ttgcaataatagtccttttggtcaattttgacacagtcaacgcct 29980523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 54539754 - 54539886
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||||  |||| ||| || |||||||||||||||  |||||||||||||| | | |    
T  54539754 aggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagctcat 54539853  T
Q  129 ttgcttctttgatccttttggtcaattttgact 161  Q
    ||||  ||||||||||||| | |||||||||||    
T  54539854 ttgcaactttgatcctttttgccaattttgact 54539886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 46721322 - 46721191
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||| |||| ||||||| ||||| || | |||||  |||| || ||| ||||||||||||||||||||||||||||||| |||||    
T  46721322 aggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagcccct 46721223  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    |||| | |||| ||||| ||||||||||||||    
T  46721222 ttgcatatttggtccttctggtcaattttgac 46721191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 51469972 - 51470134
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| ||||||| || ||| |||||||||||| ||||||||||||| ||||||  ||||| ||||||| |  ||||||||||||| |||| |    
T  51469972 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttagccccat 51470071  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||  ||||| |||||||| ||||||||||| || |||||||  |  ||||| ||||||||||    
T  51470072 tgcaactttggtccttttgatcaattttgacctagtcaacgctgatttggcatgccacatgtg 51470134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 47609696 - 47609859
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    |||||||| |||| |||||||||| |||||||||||||||| |||||||| |||| ||||||  ||||| ||||||| |  ||||||||||||| ||||     
T  47609696 aggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagcccca 47609795  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||  ||||| ||||||||  ||||||||||  | |||||||| |  ||||| ||||||||||    
T  47609796 ttgcaactttggtccttttgaccaattttgaccaagtcaacgccaatttggcatgccacatgtg 47609859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 7268924 - 7268798
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    ||||||||| ||| ||||| |||||||||||||||| ||||||||||| | |||||||| ||||||||||||| | | |||||||||||  ||| ||||     
T  7268924 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttagtcccattgca 7268825  T
Q  134 tctttgatccttttggtcaattttgac 160  Q
      ||| ||||||||| |||||||||||    
T  7268824 attttaatccttttgatcaattttgac 7268798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 34018985 - 34018923
Alignment:
Q  292 ctcttcttcatgttcatgtctatcttcatctcttccaatcaaacccaaacaaacaaaaattac 354  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  34018985 ctcttcttcatgttcaagtctatcttcatctcttccaatccaacccaaacaaacaaaaattac 34018923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 54 - 189
Target Start/End: Original strand, 6249633 - 6249767
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 153  Q
    |||||||||||||||| |||||||   ||| |||||| |||||||||||||||| |||| |||||||||  | | ||||   ||||||||||||| ||||    
T  6249633 taactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaatttta-tcccttaagatttagtctcattgcaaatttgatccttttgatcaa 6249731  T
Q  154 ttttgacttattcaacgcctacgtggcaggccacat 189  Q
    ||||||| || |||||| ||||||||||| ||||||    
T  6249732 ttttgacctagtcaacgtctacgtggcagaccacat 6249767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 31645000 - 31645103
Alignment:
Q  57 ctttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattt 156  Q
    ||||||||||||| ||||||||||||| |||||  ||||||||||||||||  | ||||||||||| ||| ||||| |||||| ||||||||  ||||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgcatctttggtccttttgaccaattt 31645099  T
Q  157 tgac 160  Q
    ||||    
T  31645100 tgac 31645103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 34018793 - 34018856
Alignment:
Q  292 ctcttcttcatgttcatgtctatcttcatctcttccaatcaaacccaaacaaacaaaaattact 355  Q
    ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  34018793 ctctttttcatgttcatatctatcttcatctcttccaatctaacccaaacaaacaaaaattact 34018856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 47610678 - 47610519
Alignment:
Q  34 taaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| |||| ||||    
T  47610678 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 47610579  T
Q  133 ttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
      ||||| ||||||||  |||||||||| || |||||||  |  ||||| ||||||||||    
T  47610578 aactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 47610519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 534498 - 534630
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||  ||||| ||||| |||||||||| |||||||| || | || ||| ||||||||||||||| | ||||||||||||| ||  |    
T  534498 aggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagcctat 534597  T
Q  129 ttgcttctttgatccttttggtcaattttgact 161  Q
    |||| |||||| ||| ||||| |||||||||||    
T  534598 ttgcatctttggtccatttggccaattttgact 534630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 24516459 - 24516563
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    |||| |||||||| |||| ||||| ||||||| |||||||| |||||||||| || |||||||||||||||||||||| | ||| ||||||||| | |||    
T  24516459 aggccaaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagctcct 24516558  T
Q  129 ttgct 133  Q
    |||||    
T  24516559 ttgct 24516563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 22776914 - 22776811
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| ||| ||||||||| ||| || ||||||||||||| || ||| ||||||||||||||| | ||||||||| ||| |||||    
T  22776914 aggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaagaattagcccct 22776815  T
Q  129 ttgc 132  Q
    ||||    
T  22776814 ttgc 22776811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 29932800 - 29932698
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||   ||| |||||||||  ||||    
T  29932800 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtacaaaaactacaattttgaccccttaagatttagtccct 29932702  T
Q  129 ttgc 132  Q
    ||||    
T  29932701 ttgc 29932698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 29981954 - 29981852
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||   ||| |||||||||  ||||    
T  29981954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtacaaaaactacaattttgaccccttaagatttagtccct 29981856  T
Q  129 ttgc 132  Q
    ||||    
T  29981855 ttgc 29981852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 51037536 - 51037637
Alignment:
Q  31 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 130  Q
    |||||||||||| ||| | ||||||||||||||||| || |||||||| |||  || | | ||||||||||||||||| ||||||||| ||| |||||||    
T  51037536 ggctaaagtgcacttttctcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagccccttt 51037635  T
Q  131 gc 132  Q
    ||    
T  51037636 gc 51037637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 40426877 - 40426717
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaactt-ccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 131  Q
    ||||||||| |||||||||||||||||| ||||| || | ||||| |||||| ||  || ||||| ||||||||| | |||||| |||||| | ||||||    
T  40426877 taaagtgcacttttccccccttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccctatgatttagctcctttg 40426778  T
Q  132 cttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
      |||||| |||||||||| |||||||||  | ||||||| || |||||| | ||||||||    
T  40426777 tgtctttggtccttttggttaattttgaccaagtcaacgcatatgtggcatgtcacatgtg 40426717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 5029784 - 5029653
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| ||||| || ||||||||| ||| ||||||||||| | ||||||  ||||| ||||||||   ||||||||| ||| |||| |    
T  5029784 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttcccccctaagaattagccccat 5029685  T
Q  130 tgcttctttgatccttttggtcaattttgact 161  Q
    ||||| |||  |||||||| || |||||||||    
T  5029684 tgcttatttcgtccttttgctctattttgact 5029653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 47615650 - 47615591
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataag 88  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  47615650 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaag 47615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 34 - 184
Target Start/End: Original strand, 51347271 - 51347422
Alignment:
Q  34 taaagtgcattttccccc-cttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| |||||||| ||||| ||| ||||| || ||||||||| ||  || | | |||||  ||||||||   ||||||||||||||||| |||||    
T  51347271 taaagtgcactttccccctcttaagtttgaaaaagttgcaattttggtcctctatgaacaaaaatgacaattttgaccccctaagatttaacccgtttgc 51347370  T
Q  133 ttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggc 184  Q
      |||||||| ||||| ||||| ||||| || ||||||| ||||||||||||    
T  51347371 aactttgatcattttgatcaatgttgacctagtcaacgcatacgtggcaggc 51347422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 52840705 - 52840554
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||  |||||| ||| |||||||||||||||| |||||||||| || ||| ||| ||||| ||||||||   ||||||||||||| |||| |    
T  52840705 ggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtccccctaagatttagccccat 52840606  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggca 181  Q
    |||   ||| ||| ||||||| |||||||||  | ||||||| || ||||||    
T  52840605 tgcaaattttatcattttggttaattttgaccgagtcaacgcttatgtggca 52840554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 51470556 - 51470415
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| | | ||||| |||||||||||||||| |||||| |  ||| ||||||  ||||| |||||||    ||||||||||||| | || |    
T  51470556 aggctaaagtgcactcttcccccctaactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaatttagcacccctaagatttagctccat 51470457  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgc 171  Q
    |||  ||||| |||||||| ||||||||||| || |||||||    
T  51470456 tgcaactttggtccttttgatcaattttgacctagtcaacgc 51470415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 535883 - 535791
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 122  Q
    |||||||||| | |||||| ||| |||||||||||||||| ||||||||| ||| ||||||| ||||||| ||||||   |||||||||||||    
T  535883 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagattta 535791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 4271463 - 4271570
Alignment:
Q  53 ttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtca 152  Q
    |||||||||||||| ||  |||||||  | | ||| ||||||||||||||||||||   | ||||||||| ||| |||||  ||||||||||||| ||||    
T  4271463 ttaactttcaaaaatttgtaattttgatctcttaaatataaaaactacaattttagcatcttaagatttagcccatttgcaactttgatcctttttgtca 4271562  T
Q  153 attttgac 160  Q
    ||||||||    
T  4271563 attttgac 4271570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 49216247 - 49216377
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccc-taagatttaacccct 128  Q
    |||||||||||| |||||| | | ||| ||||||||| || |||||||| |||| || ||| ||||||||||||| | |||||| ||||||||| | | |    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattat-gtccccttaagatttagctcat 49216345  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    |||| ||||||||| |||||| ||||||||||    
T  49216346 ttgcatctttgatcattttggccaattttgac 49216377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 51038892 - 51038789
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| ||||||||||| ||||| || |||||||| |||| || | | ||||||||||||||| ||||| ||||| ||  |||||    
T  51038892 aggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttggtcccttaagaattgtcccct 51038793  T
Q  129 ttgc 132  Q
    ||||    
T  51038792 ttgc 51038789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 784987 - 784917
Alignment:
Q  91 taaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgact 161  Q
    ||||||||||||||||| ||| |||| |||||||| |||||| ||||||||| |||||  |||||||||||    
T  784987 taaaaactacaattttaatcctctaaaatttaacctctttgcatctttgatcattttgaccaattttgact 784917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 54987103 - 54986978
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    ||||||||| ||| |||||| || ||||||||| || | ||||| | ||| || |||||||||||| ||||||   || |||||||||| | |||||||     
T  54987103 taaagtgcacttttccccct-aagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccctctaagatttagctcctttgca 54987005  T
Q  134 tctttgatccttttggtcaattttgac 160  Q
    ||||||||| |||||| ||||||||||    
T  54987004 tctttgatcattttggccaattttgac 54986978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 53614818 - 53614895
Alignment:
Q  30 aggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||| | ||  ||  ||||||||||||||||||    
T  53614818 aggctaaagtgcatttttcctcccttaactttcaaaaacttacaattttagtcctctatatataaaaactacaatttt 53614895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 6250634 - 6250520
Alignment:
Q  73 attttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcc 172  Q
    ||||||| ||| || ||| |||| ||| |||||||| || |||||||||||||  ||||| |||||||||||||||  |||||||||| || |||| |||    
T  6250634 attttggtcccctatgtacaaaacctaaaattttagccctctaagatttaacca-tttgcatctttgatccttttgaccaattttgac-taatcaatgcc 6250537  T
Q  173 tacgtggcaggccacat 189  Q
    ||| ||||| |||||||    
T  6250536 tacatggcacgccacat 6250520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 17776838 - 17776795
Alignment:
Q  144 ttttggtcaattttgacttattcaacgcctacgtggcaggccac 187  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||    
T  17776838 ttttggtcaattttgacttattcaacgcctatgtggcagaccac 17776795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 19078139 - 19078096
Alignment:
Q  144 ttttggtcaattttgacttattcaacgcctacgtggcaggccac 187  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||    
T  19078139 ttttggtcaattttgacttattcaacgcctatgtggcagaccac 19078096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 23769856 - 23769986
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||| ||||||| |||||| |||||||||||||| || || |||||||   ||  || ||  ||||||||||||||| | ||||||||||||  | | |    
T  23769856 aggctgaagtgcacttttccacccttaactttcaacaagttgcaattttaatcctctatgtgcaaaaactacaatttt-gacccctaagatttcgctcat 23769954  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    |||| |||||| ||||||||||||||||||||    
T  23769955 ttgcatctttggtccttttggtcaattttgac 23769986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 52839036 - 52839167
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| |||||| |||||| ||  ||||||| |||  ||||||  ||||| |||||||||  || |||| ||||| ||||     
T  52839036 aggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaattttacccctctaaaatttagcccca 52839135  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||   ||| |||||||||||||||||||||    
T  52839136 ttgcaaatttcatccttttggtcaattttgac 52839167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 46493038 - 46492961
Alignment:
Q  110 cccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccac 187  Q
    |||||||| |||| ||||  |||  |||||||||||||||||||||||||| || ||||||| | |||||||| ||||    
T  46493038 cccctaagttttagcccccctgcaactttgatccttttggtcaattttgacctagtcaacgcatgcgtggcagaccac 46492961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 5001199 - 5001275
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattt 105  Q
    ||||||||||||| |||||| ||| || ||||||||| ||| ||||||||||||| ||||||  ||||| |||||||    
T  5001199 aggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 6171299 - 6171183
Alignment:
Q  73 attttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcc 172  Q
    ||||||||||| || ||| |||||||| ||||||   || ||||||||||| |  ||||| |||||| ||||||||| |||||||||| || |||| |||    
T  6171299 attttggcccc-tatgtacaaaaactataattttgaccctctaagatttaaaca-tttgcatctttggtccttttggccaattttgac-taatcaatgcc 6171203  T
Q  173 tacgtggcaggccacatgtg 192  Q
    ||| ||||| ||||||||||    
T  6171202 tacttggcacgccacatgtg 6171183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 17776656 - 17776613
Alignment:
Q  298 ttcatgttcatgtctatcttcatctcttccaatcaaacccaaac 341  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||    
T  17776656 ttcatgttcatgtctatcttcatcacttccaatccaactcaaac 17776613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 19077957 - 19077914
Alignment:
Q  298 ttcatgttcatgtctatcttcatctcttccaatcaaacccaaac 341  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||    
T  19077957 ttcatgttcatgtctatcttcatcacttccaatccaactcaaac 19077914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 28262192 - 28262294
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| ||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | |||||| | |||| |||| |    
T  28262192 aggctaaagtgcacttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccat 28262291  T
Q  130 tgc 132  Q
    |||    
T  28262292 tgc 28262294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 6170296 - 6170349
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaatttta 107  Q
    |||||||||||||||| ||||||||  ||| |||||| ||||| ||||||||||    
T  6170296 taactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttta 6170349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 18442629 - 18442733
Alignment:
Q  30 aggctaaagtgcattttcccccct--taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 127  Q
    ||||||||||||| |||||||||   ||||||||||||  || | |||||||||||  | |||| |||||||||||||| | |||||| | |||| ||||    
T  18442629 aggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatgttttagcccc 18442728  T
Q  128 tttgc 132  Q
     ||||    
T  18442729 attgc 18442733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 19487703 - 19487807
Alignment:
Q  30 aggctaaagtgcattttcccccct--taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 127  Q
    ||||||||||||| |||||||||   ||||||||||||  || | |||||||||||  | |||| |||||||||||||| | |||||| | |||| ||||    
T  19487703 aggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatgttttagcccc 19487802  T
Q  128 tttgc 132  Q
     ||||    
T  19487803 attgc 19487807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 8593125 - 8593085
Alignment:
Q  152 aattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||||||||||||||||||||| ||||||| |||| ||||    
T  8593125 aattttgacttattcaacgcctatgtggcagaccacgtgtg 8593085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 7e-47; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 7316396 - 7316233
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| |||  |||| |||||||| | ||| ||||||||| |||||    
T  7316396 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagcccct 7316297  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| ||| || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  7316296 ttgcatctatggtccttttggtcaattttgacttattcaacgcctacgtggcaagccacgtgtg 7316233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 7314880 - 7315041
Alignment:
Q  31 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||| ||||| ||||||||   ||||||||||||| ||||||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccc-taagtatcaaaacaacaattttgaccccctaagatttagcccctt 7314978  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||| |||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7314979 tgcatctttggtcattttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 7315041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 17496792 - 17496960
Alignment:
Q  30 aggctaaagtgcattttcccccct-----taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccc-taagatttaa 123  Q
    ||||||||||||||||| ||||||     |||||||||||||||| |||||||  |||  |||||| ||||||| ||||||| | |||| ||||||||||    
T  17496792 aggctaaagtgcatttttccccctccccctaactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagatttaa 17496891  T
Q  124 cccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    || |||||| |||||| |||||||| |||||||||||||||||||||||||| || | |||||||||||    
T  17496892 cctctttgcatctttggtccttttgatcaattttgacttattcaacgcctacatgactggccacatgtg 17496960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 1829685 - 1829574
Alignment:
Q  49 ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttg 148  Q
    |||| ||||||| |||||||| |||||||| |||| |||||||||||||||||||||| | ||||||||||||| ||||||||| |||||| || |||||    
T  1829685 ccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccctttgcatctttggtcattttg 1829586  T
Q  149 gtcaattttgac 160  Q
    ||||||||||||    
T  1829585 gtcaattttgac 1829574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 16704599 - 16704469
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||||| |||| |||||| |||||||||||||||  |||  ||||||||| || ||    
T  16704599 aggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctttaagatttagcctct 16704500  T
Q  129 ttgcttctttgatccttttggtcaattttga 159  Q
    ||||  || |||||||||| |||||||||||    
T  16704499 ttgcaactatgatcctttttgtcaattttga 16704469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 10784591 - 10784710
Alignment:
Q  30 aggctaaagtgca-ttttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 127  Q
    ||||||||||||| ||||||| ||||||||||| |||||||| |||||||  |||| |||||||||||||||||||||| | |||| |||||||| ||||    
T  10784591 aggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagcccc 10784690  T
Q  128 tttgcttctttgatcctttt 147  Q
    |||||  |||||||||||||    
T  10784691 tttgcaactttgatcctttt 10784710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 26575131 - 26575025
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 153  Q
    |||||||||||||||| |||||||  |||| |||||| ||||||||||||||| | ||||||||||||||| |||||||  ||||||||||||| | |||    
T  26575131 taactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagatttaactcctttgcaactttgatcctttttgccaa 26575032  T
Q  154 ttttgac 160  Q
    |||||||    
T  26575031 ttttgac 26575025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 14822359 - 14822452
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 122  Q
    |||||| |||||| ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||| | |||||||||||||    
T  14822359 aggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagattta 14822452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 8659264 - 8659427
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| ||||     
T  8659264 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 8659363  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||  ||||| ||||||||  |||||||||| || |||||||  |  ||||| ||||||||||    
T  8659364 ttgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 8659427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 27437827 - 27437958
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||| |||||||||||| ||||| || ||||||||||||| ||   |||||||||||||||||   ||||||||||||| | |||    
T  27437827 aggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcct 27437926  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  ||||| ||||||||| ||||||||||    
T  27437927 ttgcaactttggtccttttggccaattttgac 27437958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 6842385 - 6842254
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| ||| ||||||||| || ||||||||||||| || ||  |||||||||||||||||| || ||| |||||  |  |    
T  6842385 aggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaattttagttccttaaaatttagtctgt 6842286  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    |||| |||||||||||||||| ||||||||||    
T  6842285 ttgcatctttgatccttttggccaattttgac 6842254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 26574618 - 26574748
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| ||| |||||||||||||||| ||||||||  ||  |||||| |||||||||| ||| | |||| ||||||||| |||||    
T  26574618 aggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactacattttga-tcccttaagatttagcccct 26574716  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  |||||||| |||| ||||||||||||    
T  26574717 ttgcaactttgatcttttttgtcaattttgac 26574748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 27322169 - 27322038
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| ||||| || ||||||||| ||| ||||||||||||| ||||||  ||||| ||||||||   ||||||||| ||| ||||||    
T  27322169 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagcccctt 27322070  T
Q  130 tgcttctttgatccttttggtcaattttgact 161  Q
    ||||| |||  |||||||| || |||||||||    
T  27322069 tgcttatttcgtccttttgctctattttgact 27322038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 5658759 - 5658886
Alignment:
Q  34 taaagtgcatttt-ccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||||||| |||||||||| ||| ||||| ||  |||||| |  || || ||| |||||||||||||||  |||| ||||||||| ||| |||||    
T  5658759 taaagtgcatttttccccccttaagttttaaaaagttataattttagttccctatgtacaaaaactacaattttgatcccttaagatttagcccatttgc 5658858  T
Q  133 ttctttgatccttttggtcaattttgac 160  Q
      ||||||||||||||||||||||||||    
T  5658859 aactttgatccttttggtcaattttgac 5658886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 6840193 - 6840319
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||| ||||||| |||||||| |||| ||||||||| || | ||||||||||| ||| || |||||||| ||||||   || ||||||||||| |||||    
T  6840193 aggctgaagtgcactttccccc-ttaagtttcaaaaagttgcgattttggccccttaaatacaaaaactataattttgaccctctaagatttaatccctt 6840291  T
Q  130 tgcttctttgatccttttggtcaatttt 157  Q
    ||| |||||||||||||||  |||||||    
T  6840292 tgcatctttgatccttttgaccaatttt 6840319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 160
Target Start/End: Complemental strand, 26949263 - 26949156
Alignment:
Q  50 cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttgg 149  Q
    ||||||||||||||||| || |||||||| |||  ||||||||||||||||||||||| ||  |||||||||||||||||||| |||||  |  |||||     
T  26949263 cccttaactttcaaaaa-ttgcaattttgcccc--taagtataaaaactacaattttaatcttctaagatttaacccctttgcatctttagtgtttttga 26949167  T
Q  150 tcaattttgac 160  Q
    |||||||||||    
T  26949166 tcaattttgac 26949156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 161
Target Start/End: Complemental strand, 10786000 - 10785883
Alignment:
Q  43 ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatc 142  Q
    ||||||||||| |||||| ||||| || |||||||  |||| |||||| ||||||||||||||||  ||| ||||||||| |||||||||  ||||||||    
T  10786000 ttttcccccct-aacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgcaactttgatc 10785902  T
Q  143 cttttggtcaattttgact 161  Q
    |||||   |||||||||||    
T  10785901 ctttttaccaattttgact 10785883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 14823678 - 14823546
Alignment:
Q  30 aggctaaagtgca--ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 127  Q
    |||||||||||||  |||| ||||||||| ||| |||||||| ||||||| ||||| |||||| | ||||||||||||| | |||||||||||||   ||    
T  14823678 aggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaagatttagaacc 14823579  T
Q  128 tttgcttctttgatccttttggtcaattttgac 160  Q
     ||||  | || || ||||||||||||||||||    
T  14823578 gttgcaaccttaattcttttggtcaattttgac 14823546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 3721611 - 3721774
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccc-taagatttaacccc 127  Q
    ||||||||||||| ||| |||||| |||||||||||||||| |||||||| |||| ||||||  ||||| | || ||||| |||| ||||||||| ||||    
T  3721611 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataa-tttagaccccttaagatttagcccc 3721709  T
Q  128 tttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
     ||||  ||||| ||||||||  |||||||||| || |||||||  |  ||||| ||||||||||    
T  3721710 attgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 3721774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 16703570 - 16703684
Alignment:
Q  31 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 130  Q
    |||||||||||| ||| |||||| | ||||||||||||| ||||||||  || |||| || ||||||||||||||||| ||||||| ||||||||||||     
T  16703570 ggctaaagtgcacttttccccct-atctttcaaaaacttgcaattttgatcc-ataaatacaaaaactacaattttagccccctaaaatttaaccccttc 16703667  T
Q  131 gcttctttgatcctttt 147  Q
     |  |||||||||||||    
T  16703668 ccaactttgatcctttt 16703684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 8660305 - 8660175
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||| | |||||||||||||||| |||||||| |||| ||||||  ||||| |||||||    ||||||||||||| | ||     
T  8660305 aggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgacccc-taagtaccaaaaccacaatttagcccccctaagatttagctcca 8660207  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  ||||||||||||||  ||||||||||    
T  8660206 ttgcaactttgatccttttgaccaattttgac 8660175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 8821872 - 8821991
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||| ||||||  ||||| |||||||    ||||||||||||| | ||     
T  8821872 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagctcca 8821971  T
Q  129 ttgcttctttgatccttttg 148  Q
    ||||  ||||| ||||||||    
T  8821972 ttgcaactttggtccttttg 8821991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 34834677 - 34834539
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| ||||||| || |||||||||||||||| ||||||||  | | ||||||| ||||| |||||||    ||||||||||||| |||| ||||    
T  34834677 taaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagatttagccccattgc 34834578  T
Q  133 ttctttgatccttttggtcaattttgacttattcaacgc 171  Q
      ||||| ||||||||  |||||||||| || |||||||    
T  34834577 aactttggtccttttgaccaattttgacctagtcaacgc 34834539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 12382811 - 12382650
Alignment:
Q  32 gctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 130  Q
    ||||||||||| ||| || ||| ||| ||| ||||| ||  ||||||| |||| ||||||| ||||||| ||||||  ||||| |||||||||||| |||    
T  12382811 gctaaagtgcacttttccacctctaatttttaaaaatttgtaattttgaccccctaagtattaaaactataattttgatccccaaagatttaaccctttt 12382712  T
Q  131 gcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    || |||||| ||||||| |  |||||||||||  ||||||| ||  ||||| ||||| ||||    
T  12382711 gcatctttggtccttttagctaattttgacttggtcaacgcttatttggcatgccacgtgtg 12382650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 3333564 - 3333464
Alignment:
Q  92 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgt 191  Q
    ||||||||||||||||  || ||| |||||| |||||| ||  ||||||||||||||| ||||||||||||| |||| |  || || |||||||||||||    
T  3333564 aaaaactacaattttaaccctctatgatttagccccttcgcaactttgatccttttggccaattttgacttagtcaatgtgtatgtcgcaggccacatgt 3333465  T
Q  192 g 192  Q
    |    
T  3333464 g 3333464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 8822894 - 8822776
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| ||||||| | ||||||||||||||||| |||||||| |||| ||||||  ||||| |||||||    ||||||||||||| |||  |    
T  8822894 ggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcccaat 8822795  T
Q  130 tgcttctttgatccttttg 148  Q
    |||  ||||| ||||||||    
T  8822794 tgcaactttggtccttttg 8822776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 12350823 - 12350898
Alignment:
Q  55 aactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 131  Q
    |||||| | |||||| |||||||| |||| || ||||||||||||||||||||  ||||||||||||| ||||||||    
T  12350823 aactttaataaacttgcaattttgacccc-tatgtataaaaactacaattttaaccccctaagatttagcccctttg 12350898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 3333084 - 3333005
Alignment:
Q  73 attttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtca 152  Q
    ||||||||||| || ||| ||||||||||||||||  || |||| ||||| |||||||||  ||||||||||||| ||||    
T  3333084 attttggccccctatgtacaaaaactacaattttaaccctctaaaatttagcccctttgcaactttgatccttttagtca 3333005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 3722609 - 3722533
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattt 105  Q
    ||||||||||||| ||||||| || |||||||||||||||| |||||||| |||  ||||||  ||||| |||||||    
T  3722609 aggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 27448015 - 27447962
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccc 82  Q
    ||||||||||||| |||||||||||||| ||| ||||| || ||||||||||||    
T  27448015 aggctaaagtgcacttttccccccttaagttttaaaaagttacaattttggccc 27447962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 26717183 - 26717127
Alignment:
Q  33 ctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataag 88  Q
    |||||||||| |||||||||||||| ||||| |||||| |||||||| |||| ||||    
T  26717183 ctaaagtgcacttttccccccttaagtttcagaaacttgcaattttgaccccttaag 26717127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 6e-44; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 11258913 - 11258771
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||     
T  11258913 aggctaaagtgcattttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagcccca 11258814  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgc 171  Q
    ||||   ||||||||||||||||||||||||| || |||||||    
T  11258813 ttgcagatttgatccttttggtcaattttgacctagtcaacgc 11258771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 13030293 - 13030451
Alignment:
Q  32 gctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 131  Q
    ||||||||||| ||| |||||| |||||||||||||||  |||||||||||| |||||| ||||| ||||||||| | ||||||||||||| | | ||||    
T  13030293 gctaaagtgcacttttccccct-aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttttgccccctaagatttagctcttttg 13030390  T
Q  132 cttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    | |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13030391 catctttggtcattttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 13030451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 22848190 - 22848353
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||| ||||| |||||||||||||||| ||||||||| ||| ||| || ||||||||||||||| |  |||||||||||| |||||    
T  22848190 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagcccct 22848289  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||  ||||| |||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  22848290 ttgcagctttggtccttttgatcaattttgacttattcaacgcctacgtggcaagccacgtgtg 22848353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 18906089 - 18905927
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||| |||| | |||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||| ||||||||||||| | | |    
T  18906089 aggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttag-cccctaagatttagctcat 18905991  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||| |||||| || ||||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  18905990 ttgcatctttggtctttttgatcaattttgacttattcaacgcctacgtggcagaccacgtgtg 18905927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 18299373 - 18299503
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||||| ||| |||||||||||||||| ||||||||||| | |||||||||||||||||||||| | |||||| |||||| ||| ||    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagcccttt 18299472  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    ||| |||||||||||||||||||||||||||    
T  18299473 tgcatctttgatccttttggtcaattttgac 18299503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 18904366 - 18904505
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||| || |||||||| ||| |||||    
T  18904366 aggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttggttccctaagaattagcccct 18904465  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaa 168  Q
    || | |||||| ||||||||| ||||||| ||||| ||||    
T  18904466 ttacatctttggtccttttggccaattttaacttagtcaa 18904505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 38840595 - 38840464
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||| ||||||||||||| ||||     
T  38840595 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaagatttagcccca 38840496  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||   ||| ||||||||| |||||||||||    
T  38840495 ttgcaattttaatccttttgatcaattttgac 38840464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 7899984 - 7899853
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||||| | ||||||||||||||| ||||||||||||| ||||     
T  7899984 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagcccca 7899885  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    |||   |||| ||| |||||||||||||||||    
T  7899884 ttgtaactttaatctttttggtcaattttgac 7899853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 23869636 - 23869511
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| ||||||||||| |||||||| ||||||||||||| ||| || |||||||||||||||||  |||||||||||| |||||    
T  23869636 aggctaaagtgcacttttccacccttaacttt-aaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagcccct 23869538  T
Q  129 ttgcttctttgatccttttggtcaatt 155  Q
    |||| ||||||||||||||| ||||||    
T  23869537 ttgcatctttgatccttttgttcaatt 23869511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 18797245 - 18797409
Alignment:
Q  30 aggctaaagtgca-ttttcc-ccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 127  Q
    ||||||||||||| |||||| |||| |||||||||||||||| |||||||| |||| ||||||| ||||||||||||||   ||||||| ||||| ||||    
T  18797245 aggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcccc 18797344  T
Q  128 tttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||| |||||| ||||||| | ||||||||||||  ||||||| ||  ||||| ||||| ||||    
T  18797345 tttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtg 18797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 22588055 - 22587929
Alignment:
Q  30 aggctaaagtgcattttccccc-cttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||||||| |||| | |||||||||||||||| ||||||||||||| || ||| ||||||||||||||| | ||| ||||||||| |||||    
T  22588055 aggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttggcccc-tatgtacaaaaactacaattttggccccttaagatttagcccct 22587957  T
Q  129 ttgcttctttgatccttttggtcaattt 156  Q
    |||| |||||| ||||||||| ||||||    
T  22587956 ttgcatctttggtccttttggccaattt 22587929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 36449777 - 36449908
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||   |||| |||| |||  ||||    
T  36449777 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccccaagaattaggccct 36449876  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||   |||||||||||||  ||||||||||    
T  36449877 ttgcaattttgatccttttgaccaattttgac 36449908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 28617946 - 28618083
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 153  Q
    |||||||||||| ||| |||||||||||||  ||||| ||||||| ||||||| | ||||||||||||| ||||||||| |||||| |  |||||||| |    
T  28617946 taactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaatttt-gccccctaagatttagcccctttgcatctttggttattttggtcta 28618044  T
Q  154 ttttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||||||| |||||| ||||||||||||| |||| ||||    
T  28618045 ttttgactaattcaatgcctacgtggcagaccacgtgtg 28618083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 54 - 192
Target Start/End: Complemental strand, 18869241 - 18869101
Alignment:
Q  54 taactttcaaaaacttc-caattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt-gcttctttgatccttttggtc 151  Q
    ||||||||||||| ||  |||||||||||   |||||| |||||||||||||||  |||||||||||||| ||| ||| || |||||| || ||||| ||    
T  18869241 taactttcaaaaatttggcaattttggccttctaagtacaaaaactacaatttttatcccctaagatttagcccattttgcatctttggtctttttgatc 18869142  T
Q  152 aattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  18869141 aattttgacttattcaacgcctatgtggcaggccacgtgtg 18869101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 7898694 - 7898821
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||||| ||| | |||||||| ||||||||||||| | ||||||||||||| |||| ||||    
T  7898694 taaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatttagccccattgc 7898793  T
Q  133 ttctttgatccttttggtcaattttgac 160  Q
       ||| ||||||||| |||||||||||    
T  7898794 aattttaatccttttgatcaattttgac 7898821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 11257621 - 11257783
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||  | ||| |||||||||||||||| |||||||   ||| |||||||||||||||||||||| | | ||||||||||| ||||     
T  11257621 aggctaaagtgcacttttactcctctaactttcaaaaacttgcaattttaaaccc-taagtataaaaactacaattttggcctcctaagatttagcccca 11257719  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||   ||||||||||||| ||||||||||| || ||||||||| ||||||| ||||| ||||    
T  11257720 ttgcaaatttgatccttttgatcaattttgacatagtcaacgcctgcgtggcatgccacgtgtg 11257783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 38839241 - 38839372
Alignment:
Q  30 aggctaaagtgcattttc-cccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    |||||||||||||||||  ||||||||| |||||||||||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| ||||     
T  38839241 aggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagcccca 38839340  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||   ||| ||| |||||||||||||||||    
T  38839341 ttgcaattttaatcattttggtcaattttgac 38839372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 24475224 - 24475354
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||  || || ||| ||||||||||||||||  |||||| ||||| |||||||||||||||||||||| | ||||||  ||||| | | ||    
T  24475224 aggctaaagtgcgcttccctcccctaactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctataatttagctcatt 24475323  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    ||| |||||| ||||||||||||||||||||    
T  24475324 tgcatctttggtccttttggtcaattttgac 24475354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 41878092 - 41878224
Alignment:
Q  31 ggctaaagtgcattttccccccttaactttcaaaaact---tccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 127  Q
    |||||||||||| |||||||||||||||||||||||||   | ||||||||||||| |||||| | ||||||||||||| | ||| ||||||||| ||||    
T  41878092 ggctaaagtgcactttccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagcccc 41878191  T
Q  128 tttgcttctttgatccttttggtcaattttgac 160  Q
     ||||   ||| ||| |||||||||||||||||    
T  41878192 attgcaattttaatctttttggtcaattttgac 41878224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 34 - 161
Target Start/End: Complemental strand, 36451018 - 36450891
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||| ||| |||||| | ||||||||||||  | |||| |||| ||| | |||||||     
T  36451018 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccccaagaattagctcctttgca 36450919  T
Q  134 tctttgatccttttggtcaattttgact 161  Q
      |||||||||||||| |||||||||||    
T  36450918 attttgatccttttggccaattttgact 36450891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 802692 - 802563
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||| | ||| ||||| ||| |||||||||||| ||||||||||||| |  ||| |||||||||||||||   || ||||||||| |||||||    
T  802692 aggctaaagtgtacttttcccccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctt 802593  T
Q  130 tgcttctttgatccttttggtcaattttga 159  Q
    ||| | |||| |||||| ||||||||||||    
T  802592 tgcatatttggtcctttaggtcaattttga 802563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 11996750 - 11996837
Alignment:
Q  73 attttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgac 160  Q
    |||||| |||| || ||| |||||||||||||||||| | |||||||||||||||||| | |||||| ||||||||||||||||||||    
T  11996750 attttgaccccctatgtacaaaaactacaattttagttctctaagatttaacccctttacatctttggtccttttggtcaattttgac 11996837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 18300822 - 18300697
Alignment:
Q  32 gctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 131  Q
    |||||| |||| ||| |||||| |||||||| |||||| |||||||| |||| |||||| ||||||||||||||| | ||||||  ||||| ||||||||    
T  18300822 gctaaattgcacttttccccct-aactttcataaacttgcaattttgaccccctaagtacaaaaactacaatttt-gacccctataatttagcccctttg 18300725  T
Q  132 cttctttgatccttttggtcaattttga 159  Q
    | |||||| ||||||||| |||||||||    
T  18300724 catctttggtccttttggacaattttga 18300697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 160
Target Start/End: Original strand, 22587525 - 22587630
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 153  Q
    ||||||||||||| |||||||||||| ||| ||  || ||||||||||||||| | ||||||||||||| || |||||| |||||| ||||||||| |||    
T  22587525 taactttcaaaaagttccaattttggtcccctat-tacaaaaactacaattttggccccctaagatttagcctctttgcatctttggtccttttggccaa 22587623  T
Q  154 ttttgac 160  Q
    |||||||    
T  22587624 ttttgac 22587630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 41879314 - 41879183
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    |||||||||| || |||| ||||||||| |||||||||||| ||||||||||||| |||||| | ||||||||||||||  ||||||| ||||| | ||     
T  41879314 aggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaatttagcacca 41879215  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||   ||| ||| ||||| |||||||||||    
T  41879214 ttgcaattttaatcattttgatcaattttgac 41879183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 13570659 - 13570529
Alignment:
Q  30 aggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||||||| |  ||| |||||||||||||||| ||||||| | ||| |||||| |||||||| |||||| |||||| |||| |||  ||||    
T  13570659 aggctaaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttggtcccccaagaattagtccct 13570560  T
Q  129 ttgcttctttgatccttttggtcaattttga 159  Q
    || |  ||||||||||||| | |||||||||    
T  13570559 ttacaactttgatcctttttgccaattttga 13570529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 21837127 - 21837201
Alignment:
Q  118 atttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||| ||||||||| |||||| || ||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  21837127 atttagcccctttgcatctttggtcattttgatcaattttgacttattcaacgcctacatggcagaccacatgtg 21837201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 1410069 - 1410147
Alignment:
Q  99 acaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgt 177  Q
    |||||||| ||||||||||||||| ||  |||||  |||| |||||||| ||||| |||||||||||||||||||||||    
T  1410069 acaattttggtcccctaagatttagcctatttgcaactttaatcctttttgtcaactttgacttattcaacgcctacgt 1410147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 810854 - 810753
Alignment:
Q  58 tttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaatttt 157  Q
    |||||||||||| ||||||||||||| |  ||| |||||||||||||||   || ||||||||| |||||||||| | |||| |||||| | ||||||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctttgcatatttggtcctttagatcaatttt 810755  T
Q  158 ga 159  Q
    ||    
T  810754 ga 810753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 1034570 - 1034478
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagattta 122  Q
    |||||||||||| ||||||||||||||||||||||||| | ||||||||||||| || |||  ||||| |||||||    |||||||||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaagattta 1034478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 22067821 - 22067745
Alignment:
Q  92 aaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaa 168  Q
    ||||||||||||||||| ||||||  ||||| || ||| ||  ||||||||||||||||||||||||||||| ||||    
T  22067821 aaaaactacaattttagccccctataatttaccctcttcgcaactttgatccttttggtcaattttgacttagtcaa 22067745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 192
Target Start/End: Complemental strand, 26545596 - 26545460
Alignment:
Q  56 actttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaatt 155  Q
    ||||||||||| || |||||||| |||| ||| || ||||| || ||||||   || |||||||||| ||||||||| |||||| || ||||| ||||||    
T  26545596 actttcaaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccctctaagatttagcccctttgcatctttggtcattttgatcaatt 26545497  T
Q  156 ttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    |||||  | ||||||| || |||||| ||||| ||||    
T  26545496 ttgaccaaatcaacgcatatgtggcatgccacgtgtg 26545460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 16446153 - 16446256
Alignment:
Q  30 aggctaaagtgcattttccc-cccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||||||| |  |||||||||||||||||||| |||||||  || ||||| || |||||||||||||||  | ||| |||| ||||||| |    
T  16446153 aggctaaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaattttgataccccaagaattaacccat 16446252  T
Q  129 ttgc 132  Q
    ||||    
T  16446253 ttgc 16446256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 184
Target Start/End: Original strand, 8534586 - 8534735
Alignment:
Q  34 taaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgct 133  Q
    ||||||||  ||| ||||||||| |||||||||||| ||||||||  ||  |||||||| ||||||||||||| |||||| |||| ||| || ||||||     
T  8534586 taaagtgctcttttcccccttaattttcaaaaacttacaattttgatcctttaagtatagaaactacaattttggtcccc-aagaattagcctctttgca 8534684  T
Q  134 tctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggc 184  Q
        |  |||||| |||||||||||||||  ||||||||||  ||||||||    
T  8534685 atagtagtcctttaggtcaattttgacttggtcaacgcctatatggcaggc 8534735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 18868923 - 18869000
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    ||||||||||| | |||||| ||| |||||||||||||||| ||||||||||| | ||| || |||||||||||||||    
T  18868923 aggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaatttt 18869000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 26544203 - 26544299
Alignment:
Q  85 taagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggca 181  Q
    |||||| |||||||||| |||||| | ||||||||||| | ||||||| | |||| |||||||| |||||||||||  | ||||||| || ||||||    
T  26544203 taagtacaaaaactacagttttagcctcctaagatttagcacctttgcatatttggtccttttgatcaattttgaccaagtcaacgcatatgtggca 26544299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 32739647 - 32739699
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    |||||||||||||||| ||||||||||||| || ||| |||||||||||||||    
T  32739647 taactttcaaaaacttgcaattttggccccttatgtacaaaaactacaatttt 32739699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 5819814 - 5819741
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaat 103  Q
    ||||||| | ||| ||||||||||||| ||||||||| || | |||||||||||||| | | ||||||||||||    
T  5819814 aggctaaggcgcactttccccccttaagtttcaaaaagttgcgattttggccccatatgaacaaaaactacaat 5819741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 161
Target Start/End: Complemental strand, 11938890 - 11938759
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||| ||| |||||||||||||||| ||||||||| | | |||||| ||||| || ||||||   ||||||||| ||| | | |    
T  11938890 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttgcccccctaagaattagctctt 11938792  T
Q  129 ttgcttctttgatccttttggtcaattttgact 161  Q
    ||||   ||||||| |||| | |||||||||||    
T  11938791 ttgcaattttgatcatttttgccaattttgact 11938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 13568000 - 13568048
Alignment:
Q  58 tttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    |||||||||||| ||||||||||||| ||| || |||||||||||||||    
T  13568000 tttcaaaaacttgcaattttggccccctaaatacaaaaactacaatttt 13568048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 21837355 - 21837298
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataag 88  Q
    ||||||||||||| |||  ||||| ||||||||||||||| ||||||||||||| ||||    
T  21837355 aggctaaagtgcactttttcccct-aactttcaaaaacttgcaattttggccccctaag 21837298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 27552525 - 27552594
Alignment:
Q  104 tttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgccta 174  Q
    ||||| |||||||||||||||||||||||    |||| |||||||||||||||||||  | ||||||||||    
T  27552525 tttagccccctaagatttaacccctttgcaatattga-ccttttggtcaattttgaccaagtcaacgccta 27552594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 5362187 - 5362247
Alignment:
Q  42 attttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaa 102  Q
    |||||| |||| ||||||||| ||| || | |||||||||||||||| | |||||||||||    
T  5362187 attttcgccccctaactttcacaaagttgcgattttggccccataagaaaaaaaactacaa 5362247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 3409 - 3248
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||||||| ||||||| ||| |||||||| |||||| ||||||||||||||| |||||    
T  3409 aggctaaagtgcacttttcccccctta-ctttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagcccct 3311  T
Q  129 ttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||  ||||||||||||| | ||||||| || |  |||| |||||||| ||| ||||||||||    
T  3310 ttgcaactttgatcctttttgccaatttttac-tggtcaatgcctacgtagcatgccacatgtg 3248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 61559 - 61430
Alignment:
Q  32 gctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 130  Q
    ||||||||||| |||||| ||||||| |||||||||||| ||||||| ||||| |||||| |||||||| |||||| | |||||| |||||| ||| |||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagccctttt 61460  T
Q  131 gcttctttgatccttttggtcaattttgac 160  Q
    || |||||| ||||||||||||||||||||    
T  61459 gcatctttggtccttttggtcaattttgac 61430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 60090 - 60220
Alignment:
Q  31 ggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| ||| || ||| ||||||| |||||||| |||||||| |||| || |||||||||||||||||||   |||||| |||||| ||||||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcccctt 60189  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    ||| |||||| || |||||||||||||||||    
T  60190 tgcatctttggtctttttggtcaattttgac 60220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 1438 - 1569
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||| | ||| |||||| ||||||| |||||||| |||||||| |||| || |||||||||||| ||||||   ||||||||||||| ||| |    
T  1438 aggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagcccat 1537  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    |||| |||||| ||||||||||||||||||||    
T  1538 ttgcatctttggtccttttggtcaattttgac 1569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 233 - 363
Alignment:
Q  31 ggctaaagtgcattttcccc-ccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| ||||||| |||||||||||||||| || ||||||||| ||| || ||| |||||||| |||||| ||||||||||| ||| ||||||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagcccctt 332  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    ||| | ||||||||||||   ||||||||||    
T  333 tgcatatttgatcctttttcccaattttgac 363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 3699 - 3836
Alignment:
Q  54 taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaa 153  Q
    |||||||||||||||| ||||||||||||| | |||| | |||||| |||||||||||||||||||||| || | ||||  |||| ||| ||||||||||    
T  3699 taactttcaaaaacttgcaattttggccccctgagtaaagaaactataattttagtcccctaagatttagccgcattgcaactttaatctttttggtcaa 3798  T
Q  154 ttttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||||| |  |||| |||||||||||| ||||| ||||    
T  3799 ttttgac-tggtcaatgcctacgtggcacgccacgtgtg 3836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 4829 - 4701
Alignment:
Q  32 gctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttg 131  Q
    ||||||||||| |||||| || ||||||| |||||| | ||||||||||||| ||| || | |||||||||||||   || ||||  |||| |||| |||    
T  4829 gctaaagtgcactttccctccctaacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttgaccctctaaattttagccccattg 4730  T
Q  132 cttctttgatccttttggtcaattttgac 160  Q
    |  |||| |||||||||  ||||||||||    
T  4729 caactttaatccttttgaccaattttgac 4701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 17469 - 17572
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||| ||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||||||| | |||| |||| ||| |||||    
T  17469 aggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatcccct 17568  T
Q  129 ttgc 132  Q
    ||||    
T  17569 ttgc 17572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 18877 - 18747
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||| ||| | ||||||| ||||| || ||||||||| ||| || ||| |||||||| |||||| | ||| ||| ||||| |||| |    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccccttaaaatttagccccat 18778  T
Q  130 tgcttctttgatccttttggtcaattttgac 160  Q
    |||  |||| ||| |||||||||||||||||    
T  18777 tgcaactttaatcattttggtcaattttgac 18747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 5540 - 5409
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||||||||| ||| |||||||||||| |||||||| |||| |||||| |||||||||||||||   ||| ||||||||| ||||     
T  5540 aggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagcccca 5441  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    || |   ||||||||||||||| |||||||||    
T  5440 ttacaaatttgatccttttggttaattttgac 5409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 4441 - 4572
Alignment:
Q  30 aggctaaagtgca--ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccc 127  Q
    |||||||||||||  ||||||||||| || |||||||||||| ||||||| ||||| |||||| ||||| ||||||||||  ||||||| ||||| ||||    
T  4441 aggctaaagtgcacattttcccccct-aattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttacccccctaaaatttagcccc 4539  T
Q  128 tttgcttctttgatccttttggtcaattttgac 160  Q
     || |   |||| || |||||||| ||||||||    
T  4540 attacaaatttggtcattttggtcgattttgac 4572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 49535 - 49404
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||||| |||||||||||| ||||| || ||||||||||||| ||   |||||||||||||||||   ||||||||||||| | |||    
T  49535 aggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcct 49436  T
Q  129 ttgcttctttgatccttttggtcaattttgac 160  Q
    ||||  ||||| ||||||||| ||||||||||    
T  49435 ttgcaactttggtccttttggccaattttgac 49404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 39343 - 39396
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccc 82  Q
    ||||||||||||| |||||||||||||| ||| ||||| || ||||||||||||    
T  39343 aggctaaagtgcacttttccccccttaagttttaaaaagttacaattttggccc 39396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 7957 - 7858
Alignment:
Q  93 aaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacatgtg 192  Q
    ||||||| |||||||  |||||| |||||| |||||||||  ||||||||||||||| ||||||||||||| |||| |  || || ||||||||||||||    
T  7957 aaaactagaattttaaccccctatgatttagcccctttgcaactttgatccttttggccaattttgacttagtcaatgtgtatgtcgcaggccacatgtg 7858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 7517 - 7394
Alignment:
Q  30 aggctaaagtgcattttcccccct-taactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| ||  |||||| ||| ||| ||||| || | |||||| |||| || ||| | |||||||||||||   ||||||||||||| |||||    
T  7517 aggctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaattttgaccccctaagatttagcccct 7418  T
Q  129 ttgcttctttgatccttttggtca 152  Q
    ||||  ||||||||||||| ||||    
T  7417 ttgcaactttgatccttttagtca 7394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 49185 - 49109
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaatttt 106  Q
    ||||||| |||| |||||| ||||||||||| |||||||| ||||||||||| | ||||||| ||||||||||||||    
T  49185 ggctaaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 48334 - 48436
Alignment:
Q  55 aactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgcttctttgatccttttggtcaat 154  Q
    |||| |||||||||| ||||||  | ||| || ||| |||||||| |||||| |||||||||||||||  |||||||| |||||| ||| ||||||||||    
T  48334 aactctcaaaaacttgcaattt--gacccctatgtacaaaaactataattttggtcccctaagatttattccctttgcatctttggtcc-tttggtcaat 48430  T
Q  155 tttgac 160  Q
    ||||||    
T  48431 tttgac 48436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 6346 - 6461
Alignment:
Q  34 taaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctttgc 132  Q
    ||||||||| |||||| ||||||| ||||||||| || | ||||| ||||| || ||| |||||||||||||||   ||||||||||||| ||  |||||    
T  6346 taaagtgcacttttccgcccttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttgaccccctaagatttagcctttttgc 6445  T
Q  133 ttctttgatccttttg 148  Q
     |||||| ||||||||    
T  6446 atctttggtccttttg 6461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 9127 - 8994
Alignment:
Q  30 aggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccct 128  Q
    ||||||||||||| |||| || |||||| ||||||||| ||   ||||| ||| | || ||| ||||||||||||||| | ||||||||||||| |||      
T  9127 aggctaaagtgcactttttcctccttaa-tttcaaaaagttgtgatttttgcctcctatgtacaaaaactacaattttgg-cccctaagatttagccctc 9030  T
Q  129 ttgcttctttgatccttttggtcaattttgacttat 164  Q
     ||| |||||||||||||||  ||||||||||||||    
T  9029 atgcatctttgatccttttgaccaattttgacttat 8994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 23081 - 23210
Alignment:
Q  31 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 130  Q
    |||||||||||| ||| |||||| ||||||||||||||| |||||||| |||  ||||||  ||||| ||||| ||  ||||||||| |||| |||| ||    
T  23081 ggctaaagtgcacttttccccct-aactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatcttgctcccctaagctttagccccatt 23179  T
Q  131 gcttctttgatccttttggtcaattttgact 161  Q
    ||   ||| ||| ||||| ||||||||||||    
T  23180 gcaaattttatcattttgctcaattttgact 23210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 2564 - 2436
Alignment:
Q  32 gctaaagtgcattttccccccttaactttcaaaaa-cttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 130  Q
    ||||||||||| ||| |||||| |||||||||||| ||| |||||||| |||| |||||| |||||| || ||||| | |||||| |||||| |  | ||    
T  2564 gctaaagtgcacttttccccct-aactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagctacatt 2466  T
Q  131 gcttctttgatccttttggtcaattttgac 160  Q
    ||   ||| |||||||||||||||||||||    
T  2465 gcaaatttcatccttttggtcaattttgac 2436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 7187 - 7059
Alignment:
Q  32 gctaaagtgcattttccccccttaactttcaaaaa-cttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 130  Q
    ||||||||||| ||| |||||| |||||||||||| ||| |||||||| |||| |||||| |||||| || ||||| | |||||| |||||| |  | ||    
T  7187 gctaaagtgcacttttccccct-aactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagctacatt 7089  T
Q  131 gcttctttgatccttttggtcaattttgac 160  Q
    ||   ||| |||||||||||||||||||||    
T  7088 gcaaatttcatccttttggtcaattttgac 7059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 37148 - 37287
Alignment:
Q  31 ggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaaccccttt 130  Q
    |||||||||||| ||| ||||||    ||| ||||| || |||||||| |||| |||||| |||||| |||||||| | |||||| |||||| |||| ||    
T  37148 ggctaaagtgcacttttccccctatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggccccctacgatttagccccatt 37247  T
Q  131 gcttctttgatccttttggtcaattttgacttattcaacg 170  Q
    |    ||| ||| ||||||||||||||||| || ||||||    
T  37248 gaaaatttcatcattttggtcaattttgacctagtcaacg 37287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 13192 - 13332
Alignment:
Q  30 aggctaaagtgcattttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    ||||||||||||| ||| |||||| |||||| ||||| ||   |||||| || | || |||  |||||||||||||| ||||||||||||||||| | ||    
T  13192 aggctaaagtgcacttttccccct-aactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttttgtcccctaagatttaactcttt 13290  T
Q  130 tgcttctttgatccttttggtcaattttgacttattcaacgc 171  Q
    ||| | |||| |||| ||   |||||| |||||| |||||||    
T  13291 tgcatatttggtcctctttcccaatttcgacttagtcaacgc 13332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 220 - 118
Alignment:
Q  31 ggctaaagtgca-ttttccccccttaactttcaaaaacttccaattttggccccataagtataaaaactacaattttagtcccctaagatttaacccctt 129  Q
    |||||||||||| |||||||||| ||||||||||||  || | |||||||||||  | |||| ||||| |||||||| | |||||| | |||| |||| |    
T  220 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagccccat 121  T
Q  130 tgc 132  Q
    |||    
T  120 tgc 118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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