View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3051_low_12 (Length: 260)
Name: NF3051_low_12
Description: NF3051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3051_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 81 - 250
Target Start/End: Original strand, 28414885 - 28415054
Alignment:
| Q |
81 |
gagtgagtttataagctgatttaaaatgtcttataaagtaatggaagcaaaaagatggcatacaataaagctattgaagcccgaacaatctagggaaatt |
180 |
Q |
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| T |
28414885 |
gagtgagtttataagctgatttaaaatgtcttataaagtaatggaagcaaaaagatggcatacaatgaagctattgaagcccgaacaatctagggaaatt |
28414984 |
T |
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| Q |
181 |
ctatctcaagttctgaactcatgccaaagaggaaaagcacttgaaggctgaaatcactgagtgatctctg |
250 |
Q |
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| T |
28414985 |
ctatctcaagttctgaactcatgccaaagaggaaaagcacttgaaggctgaaatcactgagttatctctg |
28415054 |
T |
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