View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3055_high_51 (Length: 260)
Name: NF3055_high_51
Description: NF3055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3055_high_51 |
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Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 37112029 - 37111798
Alignment:
| Q |
13 |
gagatagcaagttagagctcagaacacaacattctattctattttcttttctttctctgatactcttttgtgaaaattacttaatgtagaacatccaaaa |
112 |
Q |
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| T |
37112029 |
gagatagcaagttagagctcagaacacaacattctattctattttcttttctttctctgatactcttttgtgaaaattacttgttgtagaacatccaaaa |
37111930 |
T |
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| Q |
113 |
gtgttgtcagtgtttgagaacaatggaaggaaactacacacgactcattcatgggggttcatggggttggaagatagttatggagtgataccgtccaact |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
37111929 |
gtgttgtcagtgtttgagaacaatggaaggaaactacacacgactcattcatgggggttcatggggttggaagatagttatggagtgataccgtccagct |
37111830 |
T |
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| Q |
213 |
caatttggaacaaagctagatttggtgatggt |
244 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
37111829 |
caatttggaacaaagctagatttggtgatggt |
37111798 |
T |
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