View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3056-2-Insertion-4 (Length: 1114)

Name: NF3056-2-Insertion-4
Description: NF3056-2
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3056-2-Insertion-4
NF3056-2-Insertion-4
[»] chr4 (37 HSPs)
chr4 (8-924)||(39628963-39629894)
chr4 (446-706)||(35331971-35332233)
chr4 (446-742)||(35382312-35382613)
chr4 (510-704)||(52199741-52199937)
chr4 (446-748)||(39055039-39055344)
chr4 (437-643)||(43968647-43968854)
chr4 (562-713)||(23359093-23359245)
chr4 (472-704)||(38864970-38865205)
chr4 (567-713)||(822360-822507)
chr4 (515-743)||(2396242-2396476)
chr4 (457-701)||(11346865-11347116)
chr4 (448-713)||(8824842-8825103)
chr4 (441-606)||(5036047-5036213)
chr4 (566-704)||(10180603-10180742)
chr4 (567-742)||(35144384-35144564)
chr4 (501-600)||(45832497-45832599)
chr4 (562-646)||(30865882-30865967)
chr4 (525-711)||(49210981-49211170)
chr4 (617-713)||(45833896-45833991)
chr4 (449-706)||(23607230-23607490)
chr4 (562-711)||(12447409-12447560)
chr4 (590-703)||(22628488-22628602)
chr4 (561-704)||(44500483-44500628)
chr4 (567-643)||(54018500-54018577)
chr4 (590-645)||(51655147-51655202)
chr4 (570-706)||(35308972-35309110)
chr4 (567-696)||(41915985-41916115)
chr4 (562-615)||(53779432-53779486)
chr4 (494-547)||(12447359-12447412)
chr4 (494-539)||(28909509-28909554)
chr4 (510-702)||(26698947-26699139)
chr4 (663-709)||(18743264-18743311)
chr4 (655-710)||(51788881-51788936)
chr4 (562-643)||(2574100-2574182)
chr4 (561-609)||(25424376-25424426)
chr4 (655-713)||(51175607-51175665)
chr4 (568-646)||(41963646-41963727)
[»] chr8 (44 HSPs)
chr8 (446-761)||(31226397-31226714)
chr8 (448-766)||(18806491-18806815)
chr8 (437-713)||(5535774-5536052)
chr8 (449-666)||(23982122-23982344)
chr8 (446-671)||(5978539-5978765)
chr8 (448-711)||(6519026-6519290)
chr8 (525-741)||(14426069-14426291)
chr8 (567-709)||(2603057-2603200)
chr8 (454-703)||(5139667-5139912)
chr8 (510-652)||(9134089-9134233)
chr8 (446-713)||(37673737-37674011)
chr8 (524-718)||(31128532-31128728)
chr8 (510-711)||(11777650-11777853)
chr8 (513-713)||(1155117-1155323)
chr8 (457-704)||(28540556-28540806)
chr8 (446-734)||(35468207-35468500)
chr8 (501-704)||(9604491-9604697)
chr8 (562-706)||(35973373-35973519)
chr8 (565-711)||(3628223-3628369)
chr8 (525-652)||(9133756-9133884)
chr8 (541-696)||(16531567-16531724)
chr8 (566-743)||(13628983-13629166)
chr8 (566-743)||(13729395-13729578)
chr8 (567-702)||(23036790-23036927)
chr8 (510-695)||(8673597-8673785)
chr8 (510-713)||(28557184-28557390)
chr8 (524-615)||(28567759-28567852)
chr8 (524-615)||(28575352-28575445)
chr8 (446-711)||(38937666-38937934)
chr8 (513-623)||(10954143-10954255)
chr8 (513-623)||(10962148-10962260)
chr8 (568-646)||(6427150-6427229)
chr8 (446-505)||(9133694-9133753)
chr8 (458-646)||(12733931-12734118)
chr8 (590-706)||(30714036-30714153)
chr8 (590-706)||(30721813-30721930)
chr8 (589-711)||(7288241-7288364)
chr8 (446-517)||(16531728-16531799)
chr8 (439-517)||(31129615-31129693)
chr8 (655-713)||(43976699-43976757)
chr8 (524-615)||(28562261-28562354)
chr8 (497-560)||(5217195-5217258)
chr8 (581-684)||(23812580-23812686)
chr8 (566-615)||(36316757-36316806)
[»] chr1 (37 HSPs)
chr1 (448-738)||(47783605-47783901)
chr1 (446-734)||(32451714-32452008)
chr1 (447-704)||(23333637-23333894)
chr1 (525-743)||(43822730-43822953)
chr1 (437-713)||(11120435-11120695)
chr1 (528-704)||(42831601-42831780)
chr1 (457-743)||(25813622-25813913)
chr1 (457-742)||(27544257-27544548)
chr1 (448-681)||(40287000-40287232)
chr1 (510-704)||(13983976-13984172)
chr1 (563-761)||(52353716-52353920)
chr1 (451-614)||(38901886-38902051)
chr1 (446-744)||(36166766-36167069)
chr1 (446-623)||(36297858-36298036)
chr1 (562-713)||(32851740-32851892)
chr1 (567-693)||(44665316-44665444)
chr1 (437-519)||(24555942-24556024)
chr1 (562-704)||(11241468-11241612)
chr1 (501-703)||(49003354-49003558)
chr1 (566-704)||(51263185-51263323)
chr1 (659-748)||(38902053-38902146)
chr1 (566-743)||(51504479-51504663)
chr1 (541-613)||(24555864-24555939)
chr1 (547-621)||(31133165-31133240)
chr1 (494-646)||(11569965-11570114)
chr1 (655-703)||(42401085-42401133)
chr1 (563-645)||(51061670-51061753)
chr1 (654-703)||(37583042-37583091)
chr1 (447-516)||(42831537-42831606)
chr1 (673-717)||(23655158-23655202)
chr1 (655-699)||(31827237-31827281)
chr1 (655-703)||(42483697-42483745)
chr1 (562-634)||(3623108-3623176)
chr1 (668-703)||(20558608-20558643)
chr1 (655-713)||(30627084-30627142)
chr1 (655-713)||(32913943-32914001)
chr1 (668-713)||(37073763-37073808)
[»] chr2 (29 HSPs)
chr2 (437-704)||(6710861-6711131)
chr2 (480-742)||(9583050-9583318)
chr2 (446-766)||(11921818-11922145)
chr2 (473-748)||(14772867-14773147)
chr2 (448-713)||(26312349-26312614)
chr2 (457-643)||(44887291-44887479)
chr2 (448-713)||(34374926-34375191)
chr2 (446-645)||(40999552-40999753)
chr2 (448-713)||(41068777-41069036)
chr2 (451-646)||(36887617-36887814)
chr2 (566-703)||(65383-65522)
chr2 (527-664)||(45135717-45135855)
chr2 (567-710)||(5038707-5038854)
chr2 (562-709)||(32887588-32887735)
chr2 (565-704)||(3668832-3668973)
chr2 (447-614)||(30465136-30465306)
chr2 (562-643)||(6459070-6459152)
chr2 (494-634)||(39368657-39368798)
chr2 (560-704)||(16117901-16118047)
chr2 (566-643)||(34234879-34234957)
chr2 (568-646)||(26297112-26297191)
chr2 (629-742)||(37347784-37347905)
chr2 (565-622)||(13022796-13022854)
chr2 (449-483)||(45135657-45135691)
chr2 (590-693)||(18970016-18970120)
chr2 (658-713)||(4634045-4634100)
chr2 (565-617)||(6562936-6562988)
chr2 (672-746)||(28857181-28857259)
chr2 (672-713)||(41000006-41000047)
[»] chr6 (16 HSPs)
chr6 (487-748)||(32658367-32658633)
chr6 (437-743)||(5002315-5002627)
chr6 (525-698)||(22281763-22281938)
chr6 (561-696)||(32977370-32977506)
chr6 (598-743)||(33755768-33755917)
chr6 (562-713)||(7693903-7694056)
chr6 (474-684)||(21940941-21941153)
chr6 (441-560)||(31103542-31103660)
chr6 (565-646)||(387718-387801)
chr6 (562-621)||(25099068-25099128)
chr6 (562-634)||(6988167-6988240)
chr6 (569-623)||(31103444-31103498)
chr6 (448-573)||(7269777-7269902)
chr6 (565-621)||(18804249-18804306)
chr6 (565-613)||(9491836-9491885)
chr6 (570-612)||(32730548-32730592)
[»] chr3 (22 HSPs)
chr3 (437-713)||(46006059-46006336)
chr3 (449-601)||(35539439-35539594)
chr3 (588-735)||(35539608-35539759)
chr3 (446-646)||(52995700-52995901)
chr3 (562-642)||(54422716-54422796)
chr3 (560-704)||(41211973-41212118)
chr3 (567-654)||(36902363-36902451)
chr3 (510-731)||(46048821-46049050)
chr3 (562-624)||(19900201-19900264)
chr3 (541-634)||(30595141-30595236)
chr3 (510-615)||(55272746-55272853)
chr3 (559-636)||(47075605-47075683)
chr3 (566-646)||(33831988-33832069)
chr3 (560-704)||(36277750-36277900)
chr3 (565-646)||(26085061-26085143)
chr3 (593-713)||(13755133-13755251)
chr3 (655-716)||(40485069-40485130)
chr3 (668-711)||(40242167-40242210)
chr3 (659-713)||(29950766-29950820)
chr3 (659-713)||(29999920-29999974)
chr3 (562-611)||(41211726-41211776)
chr3 (659-713)||(52393731-52393785)
[»] chr7 (34 HSPs)
chr7 (449-704)||(43302108-43302366)
chr7 (495-748)||(36657830-36658089)
chr7 (470-699)||(36482001-36482231)
chr7 (494-713)||(23156221-23156442)
chr7 (448-646)||(39853645-39853845)
chr7 (510-735)||(44441529-44441761)
chr7 (448-646)||(36901085-36901285)
chr7 (565-713)||(46282111-46282260)
chr7 (567-713)||(31330390-31330538)
chr7 (566-742)||(36656556-36656737)
chr7 (559-696)||(6068085-6068223)
chr7 (562-716)||(37698479-37698632)
chr7 (449-743)||(46747979-46748271)
chr7 (563-698)||(2008581-2008718)
chr7 (570-712)||(29914383-29914528)
chr7 (562-637)||(48767214-48767290)
chr7 (566-713)||(4958233-4958385)
chr7 (566-713)||(19987154-19987303)
chr7 (566-645)||(25307532-25307612)
chr7 (566-704)||(47841411-47841551)
chr7 (446-713)||(38223849-38224121)
chr7 (501-713)||(5513826-5514041)
chr7 (473-622)||(25324573-25324723)
chr7 (534-634)||(44441347-44441449)
chr7 (566-614)||(19594044-19594093)
chr7 (565-646)||(13057863-13057946)
chr7 (566-613)||(19753042-19753090)
chr7 (566-621)||(36039050-36039106)
chr7 (448-479)||(36658088-36658119)
chr7 (565-634)||(15018373-15018443)
chr7 (672-743)||(31322259-31322334)
chr7 (655-713)||(43788610-43788668)
chr7 (673-706)||(27334475-27334508)
chr7 (631-704)||(30859633-30859706)
[»] chr5 (25 HSPs)
chr5 (437-679)||(13486446-13486693)
chr5 (528-711)||(1309745-1309930)
chr5 (559-706)||(2375536-2375684)
chr5 (441-666)||(42951760-42951986)
chr5 (566-743)||(41520808-41520991)
chr5 (567-742)||(13420656-13420836)
chr5 (567-748)||(26675421-26675607)
chr5 (567-748)||(26947029-26947215)
chr5 (510-704)||(18396508-18396703)
chr5 (569-703)||(35463217-35463354)
chr5 (510-643)||(12593063-12593199)
chr5 (562-646)||(15468170-15468255)
chr5 (590-713)||(29558357-29558480)
chr5 (567-743)||(7293042-7293223)
chr5 (566-745)||(837691-837874)
chr5 (559-632)||(8228754-8228828)
chr5 (449-521)||(4432229-4432300)
chr5 (438-492)||(2375477-2375531)
chr5 (655-713)||(4747050-4747108)
chr5 (562-696)||(31111753-31111890)
chr5 (566-684)||(3558767-3558887)
chr5 (494-542)||(13420839-13420887)
chr5 (565-607)||(35463353-35463396)
chr5 (565-615)||(14642295-14642345)
chr5 (595-676)||(33133264-33133346)
[»] scaffold0991 (1 HSPs)
scaffold0991 (524-644)||(2933-3054)
[»] scaffold0017 (1 HSPs)
scaffold0017 (562-713)||(31783-31934)
[»] scaffold0040 (2 HSPs)
scaffold0040 (458-586)||(55883-56011)
scaffold0040 (673-713)||(59703-59743)
[»] scaffold0712 (1 HSPs)
scaffold0712 (566-621)||(6133-6189)
[»] scaffold0709 (1 HSPs)
scaffold0709 (566-621)||(6151-6207)
[»] scaffold0036 (2 HSPs)
scaffold0036 (567-652)||(2114-2199)
scaffold0036 (663-704)||(63644-63685)


Alignment Details
Target: chr4 (Bit Score: 760; Significance: 0; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 760; E-Value: 0
Query Start/End: Original strand, 8 - 924
Target Start/End: Complemental strand, 39629894 - 39628963
Alignment:
Q  8 caatgttgatggcagctgcctataggtaatccaatcagagctgaatctgaacgcttactggatcaattatctcgatcttggataaaatgtttttctgact 107  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  39629894 caatgttgatggcagctgcctataggtaacctaatcagagctgaacctgaacgcttaccggatcaattatctcgatcttggataaaaggtttttctgact 39629795  T
Q  108 acattgtagaaacaattgacattctttttcctaagctacacggga-------------cttttacgggctagagagttaaacttccatgttattatttgg 194  Q
    |||||||||||| ||||||||||||||||||||||||||||||||             ||||||||||||| ||||||||||||||||||||||||||||    
T  39629794 acattgtagaaataattgacattctttttcctaagctacacgggatatccacacgggacttttacgggctacagagttaaacttccatgttattatttgg 39629695  T
Q  195 tacacggattctctccattgtgttcacattttttaagaaccagctttcagatttcacaaatattatacttttgatccggaacatcaaagatcttctcaaa 294  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39629694 tacacggattatctccattgtgttcacattttttaggaaccagctttcagatttcacaaatattatacttttgatccggaacatcaaagatcttctcaaa 39629595  T
Q  295 cttcattggtttgcttccatcctccatttcctatgagaaggaaattgttgtggtgacttataagctaaactttgtgcttcatctacttaaatttatggca 394  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39629594 cttcattggtttgcttccatccaccatttcctatgagaaggaaattgttgtggtgacttataagctaaactttgtgcttcatctacttaaatttatggca 39629495  T
Q  395 catattttttcctacatcacacttattaatctcattcttagaccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggag 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| | ||||||| |    
T  39629494 catattttttcctacatcacacttattaatctcattcttagaccattggatgagtcttaactatttaagattcggtgcctattaggtatcctcaatgggg 39629395  T
Q  495 agaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggac-cgcacttttttaatattaaaaaattg-aaaataa 592  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  39629394 agaatctttttgagagtcttataagactagggatcttacttaagacccccacttttaagcaggactcgcactcttttaatattaaaaaattgaaaaataa 39629295  T
Q  593 tgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaa 692  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||    
T  39629294 tgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgggttggagtgatttagtgcttattagatactactattaa 39629195  T
Q  693 aaaattataaataaatgatgtttatgagacccatttaagaaccaaaaaatgagtgtttcattgtggatggtcttggattcttagccttgtaaaataaaat 792  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  39629194 aaaattataaataaatgatgtgtatgagacccatttaagaaccgaaaaatgagtgtttcattgcggatggtcttgcattcttagccttgtaaaataaaat 39629095  T
Q  793 aaaattatctccacccataaaagtaataatatttgaaaaaccaacccaacaagcatggccacaaccccacttttcatcacaccaccgccaccaccttcag 892  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39629094 aaaattatctccacccataaaagcaataatatttgaaaaaccaacccaacaagcatggccacaaccccacttttcatcacaccaccgccaccaccttcag 39628995  T
Q  893 ccaccgcggcgccaccatctacagtagaaacc 924  Q
    |||||||||||||||||| |||||||||||||    
T  39628994 ccaccgcggcgccaccatttacagtagaaacc 39628963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 7e-89
Query Start/End: Original strand, 446 - 706
Target Start/End: Complemental strand, 35332233 - 35331971
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||||||||||||| ||||||||||||||||||  |||| |||||||||||||| || ||||||||||||| |||||||||||||||||||  |    
T  35332233 gggtcttaactatttaagacccggtacctattaggtacccccaattgagagaatctttttcagggtcttataagacttggggtcttacttaagacccaaa 35332134  T
Q  546 cttttaagcaggac-cgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  35332133 cttttaagcaggacacgcactcttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtggatcccatttaagaactttgt 35332034  T
Q  644 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataa 706  Q
    ||| ||||||  ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||    
T  35332033 gtgagatctgggttggagtgattgagtgcttattatgtactactattaaaaaagtataaataa 35331971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 446 - 742
Target Start/End: Complemental strand, 35382613 - 35382312
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||||||||||||| | ||| |||||||| |||   ||||| || ||||||||| || ||||||||||||   |||| ||||||||||||| ||    
T  35382613 gggtcttaactatttaagacccagtaactattaggcacccctaatggggataatctttttcagggtcttataagacccagggttttacttaagaccctca 35382514  T
Q  546 cttttaagcaggaccg-cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
    ||||||||| |||||  |||| |||||||||| ||||||||||| ||||||||||||| ||| ||||||||| ||||||  |||||||||||||||||||    
T  35382513 cttttaagcgggacccacactcttttaatatttaaaaattgaaatataatgatataaagttagtgatagttgattagtgtgtctcatttaagaactttgt 35382414  T
Q  644 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta---tgagacccatttaagaaccaaaaa 740  Q
    |||  |||||  ||||||||||| | ||||||||| ||||| ||||||||||||||||||| ||||| || ||    ||||||||||||| |||| ||||    
T  35382413 gtgaaatctgggttggagtgattgaatgcttattatgtactactattaaaaaattataaatgaatgaggtgtacacggagacccatttaataacccaaaa 35382314  T
Q  741 at 742  Q
    ||    
T  35382313 at 35382312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 510 - 704
Target Start/End: Original strand, 52199741 - 52199937
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacc-gcacttttttaatattaaaaaattgaaa-ataatgatataaaattatt 607  Q
    ||||||||||||  |||||||||||||||||||| |||||||||  ||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  52199741 gtcttataagacccggggtcttacttaagacccctacttttaagggggacccgcactcttttaatattaaaaaattgaaatataatgatatataattatt 52199840  T
Q  608 gatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    |||||| | ||||||| || ||||||||||||||||||| ||||||  ||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  52199841 gatagtggattagtgggtcccatttaagaactttgtgtgagatctgggttggagtgattgaatgcttattaggtactactattaaaaaattataaat 52199937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 446 - 748
Target Start/End: Original strand, 39055039 - 39055344
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||  |||||| || |||||||||||||||| || || ||| | |||| ||||| |  ||||||||||||| ||||||||| |||||||||| |    
T  39055039 gggtcttaaacatttaaaacccggtacctattaggtatctccattggggtgaattttttttaaggtcttataagactcggggtctta-ttaagaccccaa 39055137  T
Q  546 cttttaagcaggacc-gcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
    |||| ||| ||| || ||||||||| |||||||||||||| |||  |||||||||||| ||||||||||||| ||||||| | |||||||||||||||||    
T  39055138 cttt-aagtagggcccgcacttttt-aatattaaaaaattaaaatgtaatgatataaagttattgatagttgattagtgggtttcatttaagaactttgt 39055235  T
Q  644 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaa 739  Q
    ||| ||||||| |||||| |||||| | |||||||||||||  |||||||||||||||||| | |||||| ||    ||||||||||||||||||| |||    
T  39055236 gtgagatctgagttggagggatttaatacttattaggtactaatattaaaaaattataaatgagtgatgtgtacgcgtgagacccatttaagaacctaaa 39055335  T
Q  740 aatgagtgt 748  Q
    |||| ||||    
T  39055336 aatgggtgt 39055344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 437 - 643
Target Start/End: Original strand, 43968647 - 43968854
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||  |||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||| |  |||||||||||   |||||||||||||    
T  43968647 ccattgggagggtcttaactatttaagacccggaacctattaggtacccccaatggagagaatctttttcacggtcttataagatccggggtcttactta 43968746  T
Q  537 agacccccacttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaa 634  Q
    ||| | |||||||||||||||| || |||| |||||||||||||||||| ||| ||| ||||||||| ||||||||||||| ||||||| ||  ||||||    
T  43968747 aga-ctccacttttaagcaggacccacactcttttaatattaaaaaattaaaatatagtgatataaagttattgatagttgattagtgggtcctatttaa 43968845  T
Q  635 gaactttgt 643  Q
    ||| |||||    
T  43968846 gaattttgt 43968854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 562 - 713
Target Start/End: Original strand, 23359093 - 23359245
Alignment:
Q  562 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattgga 660  Q
    |||| |||||||||||||||||||||| || || ||||||| ||||||||||||| || ||||||||||||||||||||||||||| |||||   |||||    
T  23359093 cactcttttaatattaaaaaattgaaatattataatataaagttattgatagttgatttgtggatctcatttaagaactttgtgtgagatctaggttgga 23359192  T
Q  661 gtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||| |||||||||||| |||| ||||||||||||||||||| ||||||||    
T  23359193 gtgattgagtgcttattagatactactattaaaaaattataaatgaatgatgt 23359245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 472 - 704
Target Start/End: Complemental strand, 38865205 - 38864970
Alignment:
Q  472 cctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacc-gcactttttt 570  Q
    |||||||||||||| |||||| |||||||||||| || |||||| |||||   ||||||||| |||||| |||||||| ||||| |||| ||||| ||||    
T  38865205 cctattaggtacctccaatggggagaatctttttcagggtcttacaagacccagggtcttacgtaagacacccactttgaagcaagacccgcactctttt 38865106  T
Q  571 aatattaaaaaat--tgaaaa---taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 665  Q
    ||||||||||||   | ||||   ||| ||||||||||| |||||||||| || ||||||| |   ||||||||||||||| ||||||  ||||||||||    
T  38865105 aatattaaaaaaaaataaaaaatataacgatataaaattgttgatagttgattggtggatccc---taagaactttgtgtgagatctgggttggagtgat 38865009  T
Q  666 ttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    | ||||||| ||| ||||| |||||||||||||||||||    
T  38865008 taagtgctttttaagtactactattaaaaaattataaat 38864970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 567 - 713
Target Start/End: Complemental strand, 822507 - 822360
Alignment:
Q  567 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 665  Q
    ||||||||||||||||||||||  || ||||||||  ||||||||||||| ||| ||  |||||||||||||||||||||| ||||||  |||||| |||    
T  822507 ttttaatattaaaaaattgaaatgtagtgatataatgttattgatagttgattaatgtgtctcatttaagaactttgtgtgagatctgggttggagggat 822408  T
Q  666 ttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    | ||| |||||||| |||| ||||||||||| ||||||||||||||||    
T  822407 tgagtacttattagatactactattaaaaaactataaataaatgatgt 822360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 515 - 743
Target Start/End: Original strand, 2396242 - 2396476
Alignment:
Q  515 ataagactaggggtcttacttaagacccccacttttaagcaggaccg-cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatag 612  Q
    |||||||  |||||||||||||||||||| |||||||||  |||||  || ||||||||||||||||| ||||||  || ||||||||| ||||||||||    
T  2396242 ataagacccggggtcttacttaagacccc-acttttaagagggaccctcaattttttaatattaaaaacttgaaatgtactgatataaagttattgatag 2396340  T
Q  613 ttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgat 711  Q
    ||| ||||||| |  |||||||||| ||| |||| ||| |||| || ||| |||| ||| ||||||||||||| ||||||| ||||||||||||| ||||    
T  2396341 ttgattagtgggttccatttaagaaatttttgtgagatgctgagtttgagcgattgagttcttattaggtactactattaacaaattataaataagtgat 2396440  T
Q  712 gttta----tgagacccatttaagaaccaaaaaatg 743  Q
    || ||    || ||| |||||||||||| |||||||    
T  2396441 gtgtacacgtgggactcatttaagaacccaaaaatg 2396476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 457 - 701
Target Start/End: Original strand, 11346865 - 11347116
Alignment:
Q  457 atttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagca- 555  Q
    |||||| ||||||||||||||||||| ||||| | | ||||| ||||||  | ||||||||||||  ||||| | ||||||||||| || | |||||||     
T  11346865 atttaaaactcggtacctattaggtatcttcattagggagaaacttttttggcgtcttataagacccggggtttcacttaagaccctcaatcttaagcag 11346964  T
Q  556 ggaccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctg 653  Q
    || || |||| ||||||||||| |||||| ||| ||||||||||||||||||| ||| ||| ||| ||  ||||||||||||| |||||||| ||| |||    
T  11346965 ggcccacactcttttaatattataaaattaaaatataatgatataaaattattaataattgattaatgcgtctcatttaagaaatttgtgtgagatgctg 11347064  T
Q  654 ----aattggagtgatttagtgcttattaggtactgctattaaaaaattata 701  Q
          |||||| |||| | | ||||||||||||| ||||||||||||||||    
T  11347065 ggttggttggagggattgaatacttattaggtactactattaaaaaattata 11347116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 448 - 713
Target Start/End: Original strand, 8824842 - 8825103
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||||||||||||  |||||||||||||||| || || ||  |||||| ||||| || |||||||||||   ||| |||||||||||||||| |||    
T  8824842 gtcttaactatttaagatccggtacctattaggtatctccagtgaggagaat-tttttcagggtcttataagatccgggatcttacttaagacccc-act 8824939  T
Q  548 tttaagcaggac-cgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 645  Q
    ||||||| |||| | |||| |||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||| | |  |||||||||| ||| |||    
T  8824940 tttaagcgggacgcacactcttttaatatt-aaaaattgaaatataatgatataaagttattgatagttgattagtaggttccatttaagaattttatgt 8825038  T
Q  646 gtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
      ||| || |||| ||| ||| | | |||||||| ||   ||| ||||||||||||||| | ||||||    
T  8825039 aagatatggattgaagtaattgaatacttattagata---ctactaaaaaattataaatgagtgatgt 8825103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 441 - 606
Target Start/End: Complemental strand, 5036213 - 5036047
Alignment:
Q  441 tggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagac 540  Q
    |||| |||||||||| ||||||||| |  || ||||||||||||  || ||| |||| ||||||| |||||||||||||||  ||||||||| |||||||    
T  5036213 tggaagggtcttaaccatttaagacccaatagctattaggtaccc-cattggggagagtctttttcagagtcttataagaccgggggtcttaattaagac 5036115  T
Q  541 ccccacttttaagcaggac-cgcacttttttaatattaaaaaattgaaa-ataatgatataaaattat 606  Q
    || || |||||||| |||| | |||| ||||||||||||||||||||||  |||||||||||| ||||    
T  5036114 cctcaattttaagcgggactctcactcttttaatattaaaaaattgaaatgtaatgatataaagttat 5036047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 566 - 704
Target Start/End: Complemental strand, 10180742 - 10180603
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtg 663  Q
    ||||||||||||||||||||| |  |||||||||||| ||||||||||||| || |||||||||||||||||| |||||||  ||| ||   ||||||      
T  10180742 tttttaatattaaaaaattgatatgtaatgatataaagttattgatagttgatt-gtggatctcatttaagaaatttgtgtaagatgctaggttggaggc 10180644  T
Q  664 atttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    ||| ||| ||||||||||||| |||||||||||||||||||    
T  10180643 attgagttcttattaggtactactattaaaaaattataaat 10180603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 567 - 742
Target Start/End: Original strand, 35144384 - 35144564
Alignment:
Q  567 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 665  Q
    ||||||||||||||||||||||  ||||| |||||||||||| || |||  | |||||||   ||||||||| ||||| || ||||||  |||||| |||    
T  35144384 ttttaatattaaaaaattgaaatgtaatggtataaaattattaatggtttatcagtggattctatttaagaaatttgtatgagatctgggttggagggat 35144483  T
Q  666 ttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaat 742  Q
    | | |||||||||| |||| ||| ||||||||||||||||| |||| | ||    ||||||||||||||  ||||||||||    
T  35144484 tgaatgcttattagatactactactaaaaaattataaataattgatatgtacacgtgagacccatttaaataccaaaaaat 35144564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 501 - 600
Target Start/End: Original strand, 45832497 - 45832599
Alignment:
Q  501 tttttgagagtcttataagactaggggtcttacttaagaccccc-acttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgata 597  Q
    ||||| |||||||||||||||  ||||||||||||||||||||| |||||||||| ||| ||||||  ||||||||||||||| |||||| |||||||||    
T  45832497 ttttttagagtcttataagacacggggtcttacttaagaccccctacttttaagcgggatccgcacccttttaatattaaaaatttgaaatataatgata 45832596  T
Q  598 taa 600  Q
    |||    
T  45832597 taa 45832599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 562 - 646
Target Start/End: Original strand, 30865882 - 30865967
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 646  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||  ||||||||||||| ||| ||||    
T  30865882 cacttttttaatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgagtctcatttaagaaatttatgtg 30865967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 525 - 711
Target Start/End: Original strand, 49210981 - 49211170
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcagga-ccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtg 622  Q
    ||||||||||||||||| | | |||||||| ||| || | || |||||||||||||||||| |||  |||||||||||| ||||||||| ||| ||| ||    
T  49210981 gggtcttacttaagacctc-atttttaagcgggatcctcgctcttttaatattaaaaaattaaaatgtaatgatataaagttattgataattgattaatg 49211079  T
Q  623 gatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctatt-aaaaaattataaataaatgat 711  Q
    | ||||||||||| | ||| |||| ||| ||   |||||| |||  ||| |||||||| |||| ||||| |||||||||||||||||||||    
T  49211080 ggtctcatttaaggaatttttgtgagatgctaggttggagggatagagttcttattagatactactattaaaaaaattataaataaatgat 49211170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 617 - 713
Target Start/End: Original strand, 45833896 - 45833991
Alignment:
Q  617 ttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    ||||||| || ||||||||||||||||||| ||||||  ||||||||||| |||||||||||  || | ||||||||||||||||||| | ||||||    
T  45833896 ttagtgggtcccatttaagaactttgtgtgagatctgggttggagtgattgagtgcttatta-atattactattaaaaaattataaatgagtgatgt 45833991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 449 - 706
Target Start/End: Original strand, 23607230 - 23607490
Alignment:
Q  449 tcttaactatttaagactcggtacctattagg-taccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    ||||||| ||||||||| || ||||||||||| || || || ||  |||||||||||| || |||| |||||||   | ||||||||||||||| ||| |    
T  23607230 tcttaaccatttaagacccgatacctattaggatatctccattgtggagaatctttttcagggtctcataagac-ccgagtcttacttaagacctccaat 23607328  T
Q  548 tttaagcaggacc-gcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttg-tg 644  Q
     |||||| |||||  |||| |||||||||| ||||||| |||  ||| |||| ||  |||||||||| || |||||||||| ||||| | || |||| ||    
T  23607329 cttaagcgggaccatcactcttttaatattgaaaaattaaaatgtaaagataaaatgttattgatagctgattagtggatcccatttta-aattttgttg 23607427  T
Q  645 tgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataa 706  Q
    || ||| ||| ||| ||| |||| ||| |||| ||| |||| |||||||||||||||||||||    
T  23607428 tgagatgctggattagagagattgagttcttaatagatactactattaaaaaattataaataa 23607490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 562 - 711
Target Start/End: Original strand, 12447409 - 12447560
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattgg 659  Q
    |||| ||| ||| ||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||||||| ||| |||| ||| |||  ||      
T  12447409 cactatttcaattttaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggtcttatttaagaaatttttgtgagatgctgggttaa 12447508  T
Q  660 agtgatttagtgcttattaggtactgctattaaaaaattataaataaatgat 711  Q
    |  |||| ||| |||||||   ||| ||||||||||||||||||||| ||||    
T  12447509 aaggattgagttcttattatagactactattaaaaaattataaataagtgat 12447560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 590 - 703
Target Start/End: Original strand, 22628488 - 22628602
Alignment:
Q  590 taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgcta 688  Q
    |||||||||||| ||||||||||||| ||||||  || ||||||| || ||||||||||||  ||  |  ||| |||| |||| |||||| ||||| |||    
T  22628488 taatgatataaagttattgatagttgattagtgagtcccatttaaaaaatttgtgtgtgatattgggtcagagagattgagtgtttattatgtactccta 22628587  T
Q  689 ttaaaaaattataaa 703  Q
    |||||||||||||||    
T  22628588 ttaaaaaattataaa 22628602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 561 - 704
Target Start/End: Original strand, 44500483 - 44500628
Alignment:
Q  561 gcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtga-tctgaattg 658  Q
    ||||| ||||||||||||||||||||||  ||||| ||||||| |||||||||||| |||||| |||| |||| | ||  ||||||| ||  |||| ||     
T  44500483 gcactattttaatattaaaaaattgaaatgtaatgttataaaactattgatagttgattagtgaatctaatttgaaaaaattgtgtgagaggctgagttt 44500582  T
Q  659 gagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
     || |||| |||||||||||  ||||  |||||||| |||||||||    
T  44500583 cagggattaagtgcttattaaatactattattaaaatattataaat 44500628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 567 - 643
Target Start/End: Complemental strand, 54018577 - 54018500
Alignment:
Q  567 ttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| ||||  ||||||| | |||||||| || |||||    
T  54018577 ttttaatattaaaaaattgaaatataataatataaaattattgacagtttattagtgggtttcatttaaaaaatttgt 54018500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 590 - 645
Target Start/End: Original strand, 51655147 - 51655202
Alignment:
Q  590 taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 645  Q
    |||||||||||||||||||||||||| ||||| | |||||||||| || |||||||    
T  51655147 taatgatataaaattattgatagttgattagttggtctcatttaataaatttgtgt 51655202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 570 - 706
Target Start/End: Complemental strand, 35309110 - 35308972
Alignment:
Q  570 taatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgattt 667  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||  || ||||||| ||  ||||||| | | ||    | ||| ||||     
T  35309110 taatattaaaaaattaaaatataatgatataaagttattgatagttgattagtgagtcccatttaaaaaaattgtgtgagttgctaggctagagggattg 35309011  T
Q  668 agtgcttattaggtactgctattaaaaaattataaataa 706  Q
    ||| |||||||| || | |||||||||||||||||||||    
T  35309010 agtacttattagatattactattaaaaaattataaataa 35308972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 567 - 696
Target Start/End: Complemental strand, 41916115 - 41915985
Alignment:
Q  567 ttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 665  Q
    |||||||||||||||||| ||| ||||||||||||||||||| ||| ||| || | || ||| |||||| || ||||| ||  || ||| || ||| |||    
T  41916115 ttttaatattaaaaaattaaaatataatgatataaaattatttatacttgatttgagggtcttatttaataaatttgtatgaaatatgagttagagagat 41916016  T
Q  666 ttagtgcttattaggtactgctattaaaaaa 696  Q
    | |||| ||||||  |||| |||||||||||    
T  41916015 taagtgtttattaaatactactattaaaaaa 41915985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 615
Target Start/End: Complemental strand, 53779486 - 53779432
Alignment:
Q  562 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttg 615  Q
    ||||||||||||||||||||||| ||| |||||||||| || |||||||||||||    
T  53779486 cacttttttaatattaaaaaattaaaatataatgatattaagttattgatagttg 53779432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 494 - 547
Target Start/End: Original strand, 12447359 - 12447412
Alignment:
Q  494 gagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||||||| || ||||||||||||  ||||||||||||||||||| ||||    
T  12447359 gagaatcttttttagtgtcttataagacccggggtcttacttaagaccctcact 12447412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 494 - 539
Target Start/End: Complemental strand, 28909554 - 28909509
Alignment:
Q  494 gagaatctttttgagagtcttataagactaggggtcttacttaaga 539  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||    
T  28909554 gagaatctttttcagagtcttataagacccggggtcttacttaaga 28909509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 510 - 702
Target Start/End: Original strand, 26698947 - 26699139
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggac-cgcacttttttaatattaaaaaattgaaaat-aatgatataaaattatt 607  Q
    |||||||||||  |||||||| |||||||||||| | | |||||  |||| | ||| ||||||||  ||||||||||| | | ||||||||||| |||||    
T  26698947 gtcttataagaacaggggtctcacttaagacccc-attcttaagtgggactcacacctttttaat--taaaaaattgatattcaatgatataaagttatt 26699043  T
Q  608 gatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataa 702  Q
     || |||| ||||||  ||||||||||||| ||||||||  || ||  |||| | ||||| ||| |||||||| || | |||||||||| ||||||    
T  26699044 aatcgttgattagtgtgtctcatttaagaaatttgtgtgaaatgctatattgaaatgattgagttcttattagatattactattaaaaatttataa 26699139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 663 - 709
Target Start/End: Complemental strand, 18743311 - 18743264
Alignment:
Q  663 gatttagtgcttattaggtactgctattaa-aaaattataaataaatg 709  Q
    |||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  18743311 gattgagtgcttattaggtactactattaaaaaaattataaataaatg 18743264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 655 - 710
Target Start/End: Complemental strand, 51788936 - 51788881
Alignment:
Q  655 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatga 710  Q
    |||||||||||| | || |||| || ||||| ||||||||||||||||||||||||    
T  51788936 attggagtgattgaatgtttataagttactgttattaaaaaattataaataaatga 51788881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 562 - 643
Target Start/End: Complemental strand, 2574182 - 2574100
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
    |||| |||||| |||||||||||||||  |||||||||||| ||||| ||||||| |||||| ||   ||||||||| |||||    
T  2574182 cactcttttaacattaaaaaattgaaatgtaatgatataaagttattaatagttgattagtgaattctatttaagaaatttgt 2574100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 561 - 609
Target Start/End: Complemental strand, 25424426 - 25424376
Alignment:
Q  561 gcacttttttaatattaa-aaaattgaaa-ataatgatataaaattattga 609  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  25424426 gcacttttttaatattaaaaaaattgaaatgtaatgatataaaattattga 25424376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 655 - 713
Target Start/End: Original strand, 51175607 - 51175665
Alignment:
Q  655 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||| ||| ||| |||| ||||||||  |||||||||||||||||||| ||||||    
T  51175607 attggagtcattgagtccttaataggtacttttattaaaaaattataaataagtgatgt 51175665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 568 - 646
Target Start/End: Complemental strand, 41963727 - 41963646
Alignment:
Q  568 tttaatatta-aaaaattgaaa-ataatgatataaaattattgatagttgtttagt-ggatctcatttaagaactttgtgtg 646  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||||| || ||| | ||  |||||||||||| ||||||||    
T  41963727 tttaatattacaaaaaatgaaatataatgatataaaattattgatagatgattaatgggggctcatttaagaaatttgtgtg 41963646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 1e-71; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 446 - 761
Target Start/End: Complemental strand, 31226714 - 31226397
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||||||||||||| | ||||||||||| |||||  ||||| |||||||||||| || ||||||||||||| |||||     |||||||| |||    
T  31226714 gggtcttaactatttaagacccagtacctattagatacctcaaatggggagaatcttttttagggtcttataagacttggggt-----ttaagacctcca 31226620  T
Q  546 cttttaagcaggacc-gcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| || ||||||||||||||||    
T  31226619 cttttaagcgggacccgcactcttttaatattaaaaaattgaaatataatgatataaaattattgatagttgagtagtgggtcccatttaagaactttgt 31226520  T
Q  644 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaa 739  Q
    ||| |||||   |||||||| || |||  |||||||||||| ||||||||||||||||||| | |||||| ||    ||| ||||||||||||||| |||    
T  31226519 gtgagatctaggttggagtgtttgagtatttattaggtactactattaaaaaattataaatgagtgatgtgtacatgtgacacccatttaagaacccaaa 31226420  T
Q  740 aatgagtgttt-cattgtggatg 761  Q
    |||| |||||| |||||||||||    
T  31226419 aatgggtgtttccattgtggatg 31226397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 5e-59
Query Start/End: Original strand, 448 - 766
Target Start/End: Complemental strand, 18806815 - 18806491
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||| |||||||||||| || |||||||||||   || ||||| ||||||||||| |||    
T  18806815 gtcttaactatttaagacctggtacatattaggtacccccaatggggagaatctttttcagggtcttataagatccggagtcttgcttaagacccctact 18806716  T
Q  548 tttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 645  Q
    ||||||| ||| ||||||  |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||| || |||||||    
T  18806715 tttaagcgggacccgcac-cttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtggatcccatttaaaaaatttgtgt 18806617  T
Q  646 gtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaa 741  Q
    | |||||   || |||||||  | || ||||||| |||| ||||||||||||||||||||| |||||| ||    ||| |||||||||| || | |||||    
T  18806616 gagatctaggtttgagtgatcgaatgtttattagatactactattaaaaaattataaataagtgatgtgtacacgtgaaacccatttaaaaatccaaaaa 18806517  T
Q  742 tgagtgt-ttcattgtggatggtctt 766  Q
    ||||||| |||||||| |||| ||||    
T  18806516 tgagtgtcttcattgtagatgctctt 18806491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 8e-58
Query Start/End: Original strand, 437 - 713
Target Start/End: Complemental strand, 5536052 - 5535774
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| |  |||| | ||||||| |||  |  |||||||||||   ||||| |||||||    
T  5536052 ccattggaagggtcttaactatttaagacacggtacctattaggtatccccaattgggagaatcatttccaaggtcttataagatccggggttttactta 5535953  T
Q  537 agacccccacttttaagcaggacc-gcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaa 634  Q
    ||||||||||||||||||  |||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||| || |||| |  | |||||    
T  5535952 agacccccacttttaagcgagacccgcactcttttaatattaaaaaattgaaatataatgatataaagttattgaaagttgatttgtgggttccgtttaa 5535853  T
Q  635 gaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||||||| |||||   ||||||||||| ||||||||| |||||||  |||||||||||||||||| | ||||||    
T  5535852 gaactttgtgtgagatctaggttggagtgattgagtgcttataaggtactaatattaaaaaattataaatgagtgatgt 5535774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 449 - 666
Target Start/End: Original strand, 23982122 - 23982344
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccactt 548  Q
    ||||| ||||||||||  |||| ||||||| |||||| ||||||||| ||||||||| || ||||||||||||  ||||||||||||||||||| |||||    
T  23982122 tcttatctatttaagatccggtgcctattaagtacctccaatggagataatctttttcagggtcttataagacccggggtcttacttaagaccctcactt 23982221  T
Q  549 ttaagcaggaccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgttta----gtggatctcatttaagaactttgt 643  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||    ||||||| ||||||||||||||||    
T  23982222 ttaagcgggaccacacttttttaatattaaaaaattgaaatataatgatataaagttattgatagttggttagtacgtggatcccatttaagaactttgt 23982321  T
Q  644 gtgtgatctgaattggagtgatt 666  Q
    ||  ||||||  |||||||||||    
T  23982322 gtaagatctgggttggagtgatt 23982344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 446 - 671
Target Start/End: Complemental strand, 5978765 - 5978539
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||||||| || ||||||||||||| |||||||||||||  ||||| |    
T  5978765 gggtcttaactatttaagacctggtacctattaggtaccctcaatggggagaatctttttcagggtcttataagactcggggtcttacttactaccccga 5978666  T
Q  546 cttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
    |||||| || ||| ||||||| |||||| ||| ||||||||||| ||||||||||||| ||||||||||||| ||||||| || ||||||||||||||||    
T  5978665 cttttaggcgggacccgcactcttttaacatt-aaaaattgaaatataatgatataaagttattgatagttgattagtgggtcccatttaagaactttgt 5978567  T
Q  644 gtgtgatctgaattggagtgatttagtg 671  Q
    ||  ||||||  ||||||||||| ||||    
T  5978566 gtcagatctgggttggagtgattgagtg 5978539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 448 - 711
Target Start/End: Complemental strand, 6519290 - 6519026
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||| ||||||||| |||||||||||||| |||| || ||  |||||| ||||| |  ||||| ||| ||| |||||||||||||||||| || ||    
T  6519290 gtcttaaccatttaagacccggtacctattaggcacctccattgaggagaatttttttcaaggtcttgtaatactcggggtcttacttaagacctccgct 6519191  T
Q  548 tttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 645  Q
    ||||||| ||| ||||||| ||||| ||||||||||||||||  |||||||||||| ||||||||||||| ||||||  ||||||||||||| ||||||     
T  6519190 tttaagcgggatccgcactcttttagtattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgagtctcatttaagaaatttgtga 6519091  T
Q  646 g-tgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgat 711  Q
    | ||  |||  |||||| |||| | | ||||||||||||| ||||||||||||||||||||| ||||    
T  6519090 gatg--ctgggttggagagattgaattcttattaggtactactattaaaaaattataaataagtgat 6519026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 525 - 741
Target Start/End: Complemental strand, 14426291 - 14426069
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcagga-ccgcacttttttaatattaaaaaattgaaaataa-tgatataaaattattgatagttgtttagtg 622  Q
    |||||||| ||||||||||||||||||||  ||| || |||| |||||||||||||||||| ||| ||| ||||||||||||||||||| |||  |||||    
T  14426291 gggtcttatttaagacccccacttttaagtgggatccacactcttttaatattaaaaaattaaaattaaatgatataaaattattgataattgagtagtg 14426192  T
Q  623 gatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tg 718  Q
      || ||||||||||||||||||| ||||||| ||||||||||| |||| |||||||||| ||| |||||||||||||||| || |||||| ||    ||    
T  14426191 agtcccatttaagaactttgtgtgagatctgagttggagtgattgagtgtttattaggtattgcaattaaaaaattataaagaagtgatgtgtacacgtg 14426092  T
Q  719 agacccatttaagaaccaaaaaa 741  Q
     ||||||||||||||| ||||||    
T  14426091 tgacccatttaagaactaaaaaa 14426069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 567 - 709
Target Start/End: Complemental strand, 2603200 - 2603057
Alignment:
Q  567 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 665  Q
    ||||||||||||||||||||||  || ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| |||    
T  2603200 ttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtggatctcatttaagaactttgtgtgagatctggattggagggat 2603101  T
Q  666 ttagtgcttattaggtactgctattaaaaaattataaataaatg 709  Q
    | ||| |||||||| |||| ||||||||||||||||||||||||    
T  2603100 tgagtacttattagatactactattaaaaaattataaataaatg 2603057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 454 - 703
Target Start/End: Complemental strand, 5139912 - 5139667
Alignment:
Q  454 actatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaag 553  Q
    |||||||||||| ||||||||||||| ||||  |||| | |||||||||||| || ||||||||||||| |||||||||||    |||  ||||||||||    
T  5139912 actatttaagacccggtacctattagatacccccaatagggagaatctttttcag-gtcttataagactcggggtcttact----accttcacttttaag 5139818  T
Q  554 caggacc-gcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatc 651  Q
    | ||||| ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||  | |||||||||| ||||||||| ||||    
T  5139817 cgggaccagcactcttttaatattaaaaaatgaaaatataatgatataaaattattgatagttgattagtgagtttcatttaagagctttgtgtgagatc 5139718  T
Q  652 tgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaa 703  Q
    ||  ||||||||||| |||  |||||||||||| |  | |||||||||||||    
T  5139717 tgggttggagtgattaagt-attattaggtactacattaaaaaaattataaa 5139667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 510 - 652
Target Start/End: Original strand, 9134089 - 9134233
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattatt 607  Q
    ||||||||||||| |||||||||||||||| || | ||||||||| ||| ||||||| |||||||||||||||||||||| ||||||||||||| |||||    
T  9134089 gtcttataagactcggggtcttacttaagatcctcccttttaagcgggatccgcactcttttaatattaaaaaattgaaatataatgatataaagttatt 9134188  T
Q  608 gatagttgtttagtggatctcatttaagaactttgtgtgtgatct 652  Q
    |||||||| ||||||  |||||||||||||||||||||| |||||    
T  9134189 gatagttgattagtgagtctcatttaagaactttgtgtgagatct 9134233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 446 - 713
Target Start/End: Complemental strand, 37674011 - 37673737
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||  |||||||||||||||||||||||||| || || ||| | |||| ||||| |   ||||||||||||  |  ||||| ||||||||||||    
T  37674011 gggtcttaaacatttaagactcggtacctattaggtatctccattggggtgaatttttttcaagatcttataagactcagaatcttatttaagaccccca 37673912  T
Q  546 cttttaagcagga-ccgcacttttttaatattaaaaaatt-gaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
      ||||||| ||  ||  ||  |||||||||||||||||| |||  || ||||||||||||||||||||||| ||||||| ||  |||||||||||||||    
T  37673911 actttaagcggggtccatacgcttttaatattaaaaaattagaatgtagtgatataaaattattgatagttgattagtgggtccaatttaagaactttgt 37673812  T
Q  644 gtgtgatctgaattggagtga-----tttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    ||| |||||| ||||||| ||     || ||| ||||||||||||| ||||||||||||||||||| | ||||||    
T  37673811 gtgagatctggattggagggattaagttaagtacttattaggtactactattaaaaaattataaatgagtgatgt 37673737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 524 - 718
Target Start/End: Complemental strand, 31128728 - 31128532
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggacc-gcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagt 621  Q
    ||||||||||||||||   |||||||||||  ||||| ||||| || ||||||||| ||||||||| ||||||||||||| ||||||||||||  |||||    
T  31128728 ggggtcttacttaagaattccacttttaagagggacccgcactcttataatattaacaaattgaaatataatgatataaagttattgatagtttattagt 31128629  T
Q  622 ggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgtttatg 718  Q
     | |||||||||||||||||||| | ||| |   || |||||||| | ||||||||||||||| ||||||||||||||||||| | |||||| ||||    
T  31128628 aggtctcatttaagaactttgtgagagatttaggttagagtgattgaatgcttattaggtactactattaaaaaattataaatgagtgatgtgtatg 31128532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 510 - 711
Target Start/End: Complemental strand, 11777853 - 11777650
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggac-cgcacttttttaatattaaaaaattgaaaa-taatgatataaaattatt 607  Q
    |||||||||||||  || |||||||||||| || || | |||| | |||| |||||| ||||||||||||||| ||||||  |||||||||||| |||||    
T  11777853 gtcttataagactctggatcttacttaagatcctcaatcttaaacgggactcgcactcttttaatattaaaaagttgaaatgtaatgatataaagttatt 11777754  T
Q  608 gatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaa 707  Q
    |||||||| ||||| | ||||||||||||| ||||||||  || || |||| || |||| | ||||| ||||||||| ||||||| ||||||||||| ||    
T  11777753 gatagttgattagtaggtctcatttaagaaatttgtgtgatatatggattgcagggattgaatgcttgttaggtactactattaagaaattataaatgaa 11777654  T
Q  708 tgat 711  Q
    ||||    
T  11777653 tgat 11777650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 513 - 713
Target Start/End: Complemental strand, 1155323 - 1155117
Alignment:
Q  513 ttataagactaggggtcttacttaagacccccacttttaagcaggac-cgcacttttttaatattaaaaaattgaaaa-----taatgatataaaattat 606  Q
    |||||||||  | |||||||||||||||| ||| | |||||| |||| | |||| ||||||||||||||||||||||      |||||||||||| ||||    
T  1155323 ttataagacccgaggtcttacttaagacctccaatcttaagcgggactcacactcttttaatattaaaaaattgaaatgtaattaatgatataaagttat 1155224  T
Q  607 tgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataa 706  Q
    || |||||| ||| |   ||||||||||||| |||||||| ||||||  |||||| |||| | |||||||||| |||| ||||||||||||||||||| |    
T  1155223 tggtagttgattaatatgtctcatttaagaaatttgtgtgagatctgggttggagggattgaatgcttattagatactactattaaaaaattataaatga 1155124  T
Q  707 atgatgt 713  Q
     ||||||    
T  1155123 gtgatgt 1155117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 457 - 704
Target Start/End: Original strand, 28540556 - 28540806
Alignment:
Q  457 atttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcag 556  Q
    |||||||||  | |||||||||| |||| ||| ||| |||||  |||||  | |||||||||||| | | |||| |||||||| || || | ||| || |    
T  28540556 atttaagacctgatacctattagttaccctcattggggagaagttttttcggggtcttataagaccacgagtctcacttaagaacctcaatcttatgcgg 28540655  T
Q  557 gac-cgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctg 653  Q
    ||| | |||| ||||||||||||||||||||||  ||||||||||||| |||||||||||| ||||||  |||| |||||||| |||||||| ||| |||    
T  28540656 gactcacactcttttaatattaaaaaattgaaatgtaatgatataaaactattgatagttgattagtgagtctcttttaagaaatttgtgtgagatgctg 28540755  T
Q  654 aattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
      ||||||| ||| | | ||||||| ||||| |||||||||||||||||||    
T  28540756 ggttggagtaattgaatacttattaagtactactattaaaaaattataaat 28540806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 446 - 734
Target Start/End: Original strand, 35468207 - 35468500
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||  ||||||||| ||||||||||||||||||     ||  | |||| ||||| |  ||||||||||||  ||||||||| |||||||| |||    
T  35468207 gggtcttaaacatttaagacccggtacctattaggtacccctgttgaggtgaatttttttcaaggtcttataagacccggggtcttatttaagaccacca 35468306  T
Q  546 cttttaagcaggac-cgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
      ||||||| || | |||||  |||||||||||||||||| |||  || ||  ||||| ||||||||||||  ||||||  ||||||||||||||||||     
T  35468307 actttaagcggggctcgcacgcttttaatattaaaaaattcaaatgtagtggcataaagttattgatagttaattagtgagtctcatttaagaactttga 35468406  T
Q  644 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaac 734  Q
    ||| |||| |  |||||| |||| ||| ||||||| ||||||||||| ||||||||||||| | |||||| ||    ||||||||||||||||||    
T  35468407 gtgagatcagtgttggagggattgagtacttattaagtactgctatt-aaaaattataaatgagtgatgtgtacgcgtgagacccatttaagaac 35468500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 501 - 704
Target Start/End: Complemental strand, 9604697 - 9604491
Alignment:
Q  501 tttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcagga-ccgcacttttttaatattaaaaaattgaaaa-taatgatat 598  Q
    ||||| || |||||| |||||| ||||||||| |||||| ||||| |||||||| ||| || |||| ||||||| ||||||||||||||  |||||||||    
T  9604697 ttttttagggtcttacaagactcggggtcttatttaagatccccatttttaagcgggatcctcactcttttaatgttaaaaaattgaaatctaatgatat 9604598  T
Q  599 aaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaat 697  Q
    ||| ||||||||||||| ||||||| |  |||||||||| ||| | || ||| |||  |||||  |||| ||| |||||||| ||||  |||||||||||    
T  9604597 aaagttattgatagttgattagtgggttccatttaagaaatttttatgagatgctgggttggatggattgagttcttattagatactattattaaaaaat 9604498  T
Q  698 tataaat 704  Q
    |||||||    
T  9604497 tataaat 9604491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 562 - 706
Target Start/End: Complemental strand, 35973519 - 35973373
Alignment:
Q  562 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattgg 659  Q
    ||||||||||||||||||||||||| | ||||||||||||  ||||||||| ||| ||||| ||||||||||||||| | |||||| |||  ||| ||||    
T  35973519 cacttttttaatattaaaaaattgatatataatgatataatgttattgataattgattagtagatctcatttaagaaatgtgtgtgagatattgagttgg 35973420  T
Q  660 agtgatttagtgcttattaggtactgctattaaaaaattataaataa 706  Q
    |  |||| |||| |||||||||||  |||||||||||||||||||||    
T  35973419 atggattaagtgtttattaggtacaactattaaaaaattataaataa 35973373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 565 - 711
Target Start/End: Original strand, 3628223 - 3628369
Alignment:
Q  565 ttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtg 663  Q
    |||||||||||||||||||||| |  |||||||||||| |||||| |||||| ||| || || ||||||||||| |||||| |  | |||| ||||||      
T  3628223 ttttttaatattaaaaaattgagatgtaatgatataaagttattgctagttgattaatgaatttcatttaagaaatttgtgagata-ctgagttggagga 3628321  T
Q  664 atttagtgcttattaggtactgctattaaaaaattataaataaatgat 711  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  3628322 atttagtgcttattaagcactactattaaaaaattataaataaatgat 3628369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 525 - 652
Target Start/End: Original strand, 9133756 - 9133884
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtg 622  Q
    |||| ||||||||||||| ||||||||||| ||| ||||||| ||||||||||| |||||||||| ||||||||||||  || ||| |||||| ||||||    
T  9133756 gggttttacttaagaccctcacttttaagcgggatccgcactcttttaatattagaaaattgaaatataatgatataagttt-ttggtagttgattagtg 9133854  T
Q  623 gatctcatttaagaactttgtgtgtgatct 652  Q
      |||||||||||||||||||||| |||||    
T  9133855 agtctcatttaagaactttgtgtgagatct 9133884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 541 - 696
Target Start/End: Complemental strand, 16531724 - 16531567
Alignment:
Q  541 ccccacttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaac 638  Q
    ||||| |||||||| ||| ||||||  |||||||||||||||||||||| ||||||||||||| ||||  ||||||| ||||| |||||| ||||||||     
T  16531724 ccccatttttaagcgggatccgcacaattttaatattaaaaaattgaaatataatgatataaagttatgaatagttgattagtagatctcttttaagaat 16531625  T
Q  639 tttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaa 696  Q
    ||||| || |||||   ||||| ||||| |||||||||||  || | |||||||||||    
T  16531624 tttgtatgagatctaggttggaatgattgagtgcttattaaatattactattaaaaaa 16531567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 566 - 743
Target Start/End: Complemental strand, 13629166 - 13628983
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatct-gaattggagtg 663  Q
    ||||||||||||||||||||| |  ||||| |||||| ||||||||||||| ||  ||||||  ||||||||| ||||| || ||| | |  |||||| |    
T  13629166 tttttaatattaaaaaattgatatgtaatggtataaagttattgatagttgatttctggatcctatttaagaattttgtatgagatgttgggttggaggg 13629067  T
Q  664 atttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaatg 743  Q
    ||| | | |||||||| |||| ||||||||||||||||||| |||||||| ||    ||||||||||||||||||  |||||||    
T  13629066 attgactacttattagatactactattaaaaaattataaatgaatgatgtgtacatgtgagacccatttaagaactcaaaaatg 13628983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 566 - 743
Target Start/End: Complemental strand, 13729578 - 13729395
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatct-gaattggagtg 663  Q
    ||||||||||||||||||||| |  ||||| |||||| ||||||||||||| ||  ||||||  ||||||||| ||||| || ||| | |  |||||| |    
T  13729578 tttttaatattaaaaaattgatatgtaatggtataaagttattgatagttgatttctggatcctatttaagaattttgtatgagatgttgggttggaggg 13729479  T
Q  664 atttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaatg 743  Q
    ||| | | |||||||| |||| ||||||||||||||||||| |||||||| ||    ||||||||||||||||||  |||||||    
T  13729478 attgactacttattagatactactattaaaaaattataaatgaatgatgtgtacatgtgagacccatttaagaactcaaaaatg 13729395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 567 - 702
Target Start/End: Original strand, 23036790 - 23036927
Alignment:
Q  567 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtga 664  Q
    |||||||||||||||||||| |  |||||||||||||||||||||||||| | ||||||| ||  ||||||| |||||||| ||| |||  ||| || ||    
T  23036790 ttttaatattaaaaaattgatatgtaatgatataaaattattgatagttgatcagtggatttctattaagaaatttgtgtgagatgctgggttgaagaga 23036889  T
Q  665 tttagtgcttattaggtactgctattaaaaaattataa 702  Q
    || ||| |||||||| |||| ||||| |||||||||||    
T  23036890 ttgagttcttattagatactactattgaaaaattataa 23036927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 510 - 695
Target Start/End: Complemental strand, 8673785 - 8673597
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggaccgca-cttttttaatattaaaaaattgaaaat--aatgatataaaattat 606  Q
    ||||||||||||| | ||||| ||||||||||| || | ||||   |||||  | |||||||||||||||||||| ||||||  | ||||||||| || |    
T  8673785 gtcttataagactcgaggtctcacttaagaccctcaatcttaaatgggacccaaacttttttaatattaaaaaat-gaaaatgtagtgatataaagtttt 8673687  T
Q  607 tgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaa 695  Q
    ||||| ||| ||||||| ||  |||||| || ||| |||| ||| |||  |||||| |||| ||||||||||||||||| ||||||||||    
T  8673686 tgataattgattagtgggtcaaatttaaaaaatttatgtgagatgctgggttggagagattgagtgcttattaggtactactattaaaaa 8673597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 510 - 713
Target Start/End: Original strand, 28557184 - 28557390
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattatt 607  Q
    |||||||||||| | |||||| ||||||||||| || | ||| |  ||| || |||| ||||||||||||||||||||||  |||| |||||||| | ||    
T  28557184 gtcttataagaccacgggtctcacttaagaccctcaatcttatgtgggatccacactcttttaatattaaaaaattgaaatgtaataatataaaagtgtt 28557283  T
Q  608 gatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataa 706  Q
    |||||||| ||||||  |||| ||||| ||  || |||| ||| ||   ||||||  ||| |||  |||||||||||| ||||||||||||||||||| |    
T  28557284 gatagttgattagtgagtctcttttaaaaaaattatgtgagatcctaggttggaggaattgagtagttattaggtactactattaaaaaattataaatta 28557383  T
Q  707 atgatgt 713  Q
     ||||||    
T  28557384 gtgatgt 28557390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 524 - 615
Target Start/End: Original strand, 28567759 - 28567852
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggaccg-cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttg 615  Q
    ||||||| ||||||||||| || | |||||| |||||  | || |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  28567759 ggggtctcacttaagaccctcaatcttaagcgggacccactctattttaatattaaaaaattgaaatataatgatataaagttattgatagttg 28567852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 524 - 615
Target Start/End: Original strand, 28575352 - 28575445
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggaccg-cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttg 615  Q
    ||||||| ||||||||||| || | |||||| |||||  | || |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  28575352 ggggtctcacttaagaccctcaatcttaagcgggacccactctcttttaatattaaaaaattgaaatataatgatataaagttattgatagttg 28575445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 446 - 711
Target Start/End: Original strand, 38937666 - 38937934
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgaga-gtcttataagactaggggtcttacttaagaccccc 544  Q
    ||||||||||||||||||||||||||| || ||||||||| || ||   |   |||||||  || ||||||||||||   | |||||||||||||||||     
T  38937666 gggtcttaactatttaagactcggtacttaataggtacctccattgtgaaatttcttttttggaagtcttataagacccagagtcttacttaagacccca 38937765  T
Q  545 acttttaagcaggaccg-cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttg 642  Q
    | | |||||  | |||  ||  ||||||||||||||||||| | |  | |||||||||| || |||||||||| || |||||||  |||||| |||||||    
T  38937766 a-tcttaagtggaacccacatctttttaatattaaaaaattaatatgtgatgatataaagttgttgatagttgatttgtggatcctatttaaaaactttg 38937864  T
Q  643 tgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgat 711  Q
    |||| |||  ||  |||||| |||| ||| ||||||||||    ||||||||||||||||||||| ||||    
T  38937865 tgtgagatgttgtgttggagggattgagttcttattaggtgtcactattaaaaaattataaataagtgat 38937934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 513 - 623
Target Start/End: Complemental strand, 10954255 - 10954143
Alignment:
Q  513 ttataagactaggggtcttacttaagacccccacttttaagcaggac-cgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgat 610  Q
    |||||||||  | ||||| ||||||||| | || |||| ||| |||| |||| | ||||||||||||||||||||||  |||||||||||||| ||||||    
T  10954255 ttataagacccgaggtctcacttaagactctcaatttttagcgggactcgcaatcttttaatattaaaaaattgaaatgtaatgatataaaataattgat 10954156  T
Q  611 agttgtttagtgg 623  Q
    ||||| |||||||    
T  10954155 agttgattagtgg 10954143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 513 - 623
Target Start/End: Complemental strand, 10962260 - 10962148
Alignment:
Q  513 ttataagactaggggtcttacttaagacccccacttttaagcaggac-cgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgat 610  Q
    |||||||||  | ||||| ||||||||| | || |||| ||| |||| |||| | ||||||||||||||||||||||  |||||||||||||| ||||||    
T  10962260 ttataagacccgaggtctcacttaagactctcaatttttagcgggactcgcaatcttttaatattaaaaaattgaaatgtaatgatataaaataattgat 10962161  T
Q  611 agttgtttagtgg 623  Q
    ||||| |||||||    
T  10962160 agttgattagtgg 10962148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 568 - 646
Target Start/End: Complemental strand, 6427229 - 6427150
Alignment:
Q  568 tttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 646  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| | ||  |||||| || ||||||||    
T  6427229 tttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagtaggtcctatttaaaaaatttgtgtg 6427150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 446 - 505
Target Start/End: Original strand, 9133694 - 9133753
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatcttttt 505  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||   |||||||||||    
T  9133694 gggtcttaactatttaagacccggtacctattaggtacctccaatgagaagaatcttttt 9133753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 458 - 646
Target Start/End: Original strand, 12733931 - 12734118
Alignment:
Q  458 tttaagactcggtacctattaggtaccttcaatggagagaatctttttgagag-tcttataagactaggggtcttacttaagacccccacttttaagcag 556  Q
    |||||||||| ||||||||||||||||  ||||   ||||| |||||| |||| ||||||||||||   ||||| |||||||||| ||| | ||||   |    
T  12733931 tttaagactcagtacctattaggtaccc-caattaggagaaacttttt-agaggtcttataagactcatggtctcacttaagaccaccaatcttaatgtg 12734028  T
Q  557 gaccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 646  Q
      |  ||||||||||||||||||||||| |||  |||||||||||| ||   |||||||| ||||||| ||||||||||||| ||||||||    
T  12734029 acctacacttttttaatattaaaaaattaaaatgtaatgatataaagttgaggatagttgattagtgg-tctcatttaagaaatttgtgtg 12734118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 590 - 706
Target Start/End: Complemental strand, 30714153 - 30714036
Alignment:
Q  590 taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatct-gaattggagtgatttagtgcttattaggtactgcta 688  Q
    |||||||||||| ||||||||||||| ||||||  || ||||||  || |||||||| ||| | | ||||||   ||| ||||||||||| ||||| |||    
T  30714153 taatgatataaagttattgatagttgattagtgagtcccatttacaaaatttgtgtgagatgttggattggaaatattaagtgcttattatgtactacta 30714054  T
Q  689 ttaaaaaattataaataa 706  Q
    |||||| |||||||||||    
T  30714053 ttaaaatattataaataa 30714036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 590 - 706
Target Start/End: Complemental strand, 30721930 - 30721813
Alignment:
Q  590 taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatct-gaattggagtgatttagtgcttattaggtactgcta 688  Q
    |||||||||||| ||||||||||||| ||||||  || ||||||  || |||||||| ||| | | ||||||   ||| ||||||||||| ||||| |||    
T  30721930 taatgatataaagttattgatagttgattagtgagtcccatttacaaaatttgtgtgagatgttggattggaaatattaagtgcttattatgtactacta 30721831  T
Q  689 ttaaaaaattataaataa 706  Q
    |||||| |||||||||||    
T  30721830 ttaaaatattataaataa 30721813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 589 - 711
Target Start/End: Original strand, 7288241 - 7288364
Alignment:
Q  589 ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgct 687  Q
    ||||||||||||| |||| |||||||| |||||   ||||||||||||| ||| | || ||| |||  |||||| |||| ||| |||||||| |||| ||    
T  7288241 ataatgatataaagttatcgatagttgattagtaagtctcatttaagaaatttctatgagatgctgggttggagggattaagttcttattagatactact 7288340  T
Q  688 attaaaaaattataaataaatgat 711  Q
    || ||| |||||||||||| ||||    
T  7288341 atgaaacaattataaataagtgat 7288364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 446 - 517
Target Start/End: Complemental strand, 16531799 - 16531728
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttata 517  Q
    |||| |||||||||||| | |||||||||||||||||| || ||||| || ||||||||| | |||||||||    
T  16531799 gggtgttaactatttaaaattcggtacctattaggtacttttaatggggaaaatctttttcaaagtcttata 16531728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 439 - 517
Target Start/End: Complemental strand, 31129693 - 31129615
Alignment:
Q  439 attggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttata 517  Q
    |||||| |||||| ||||||||||||| |||||| ||||||||||| | ||||   ||||||||||| || ||||||||    
T  31129693 attggaagggtctaaactatttaagacccggtacttattaggtacccttaatgagaagaatctttttcagggtcttata 31129615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 655 - 713
Target Start/End: Original strand, 43976699 - 43976757
Alignment:
Q  655 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||| ||| ||| |||| ||||||||  |||||||||||||||||||||||||||    
T  43976699 attggagtcattgagtccttaataggtacttttattaaaaaattataaataaatgatgt 43976757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 524 - 615
Target Start/End: Original strand, 28562261 - 28562354
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggaccg-cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttg 615  Q
    ||||||| ||||||||||| || | |||||| |||||  | || |||||||||||||||||||||| ||||| ||||||| |||||||| ||||    
T  28562261 ggggtctcacttaagaccctcaatcttaagcgggacccactctattttaatattaaaaaattgaaatataataatataaagttattgattgttg 28562354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 497 - 560
Target Start/End: Original strand, 5217195 - 5217258
Alignment:
Q  497 aatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacc 560  Q
    ||||||||| || ||||||||||||  |  ||||||| |||||||||||||||||||| |||||    
T  5217195 aatctttttcagggtcttataagacccgaagtcttacctaagacccccacttttaagcgggacc 5217258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 581 - 684
Target Start/End: Complemental strand, 23812686 - 23812580
Alignment:
Q  581 aattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaacttt-gtgtgtgat-ctgaattggagtgatttagtgcttatt 677  Q
    |||||||| ||||| ||||||| ||||||||||||| |||||| ||  ||||||| || ||| ||||| ||| ||  ||||||| |||| ||||||||||    
T  23812686 aattgaaatataattatataaagttattgatagttgattagtgaataccatttaaaaaattttgtgtgagatgctagattggagagattgagtgcttatt 23812587  T
Q  678 aggtact 684  Q
    |||||||    
T  23812586 aggtact 23812580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 566 - 615
Target Start/End: Original strand, 36316757 - 36316806
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttg 615  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  36316757 tttttaatattaaaaa-ttgaaatgtaatgatataaaattattgatagttg 36316806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 5e-68; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 448 - 738
Target Start/End: Complemental strand, 47783901 - 47783605
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||||||||||||| | |||||||||| | |||  |||||| || ||||||||| || ||||||||||||  ||||||||||||||||||||||||    
T  47783901 gtcttaactatttaagacccagtacctattaagaacccccaatggggaaaatctttttcagggtcttataagacccggggtcttacttaagacccccact 47783802  T
Q  548 tttaagcaggac-cgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 645  Q
    ||||||| |||| | |||| | |||||||||||||||||||| ||||||||||||||||||||||||||| ||| | | |  ||||||||||||||||||    
T  47783801 tttaagcgggactcacactctattaatattaaaaaattgaaatataatgatataaaattattgatagttgattaataggttccatttaagaactttgtgt 47783702  T
Q  646 gtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaa 738  Q
    | ||| ||| ||||||||||| |||| ||||||  ||||  ||||||||||||||||| ||||||||| ||    ||||||||||||||||||||||    
T  47783701 gagatttgagttggagtgattgagtgtttattaaatactattattaaaaaattataaacaaatgatgtgtacacgtgagacccatttaagaaccaaa 47783605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 446 - 734
Target Start/End: Complemental strand, 32452008 - 32451714
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||||||||||||| |||||| |||||||||||   |||||||||||||||||| ||  |||||||||||  || |||||| |||||||| |||    
T  32452008 gggtcttaactatttaagacccggtacatattaggtacccctaatggagagaatctttttcaggatcttataagacatggagtcttatttaagacctcca 32451909  T
Q  546 cttttaagcaggac-cgcacttttttaatatt-aaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttg 642  Q
    |||||||  ||||| | ||||  ||||||||| |||||| ||||| | ||||||||||| ||||||||| ||  ||||||| |||||||||||||||||     
T  32451908 cttttaaataggacacacactcatttaatattaaaaaaaatgaaatacaatgatataaagttattgataatttattagtgggtctcatttaagaacttt- 32451810  T
Q  643 tgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaac 734  Q
    |||| ||||||| ||||||||||| | ||||||||||||| | ||||||||||||||||||| | |||||| ||    ||||||||||||||||||    
T  32451809 tgtgagatctgagttggagtgattgaatgcttattaggtattactattaaaaaattataaattagtgatgtgtaaacgtgagacccatttaagaac 32451714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 447 - 704
Target Start/End: Original strand, 23333637 - 23333894
Alignment:
Q  447 ggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccac 546  Q
    |||||||||||||||||| |||||  ||||||| ||  ||||||||||| ||||||||| |  || |||||| ||  | | ||||||||| |||||  ||    
T  23333637 ggtcttaactatttaagattcggtgtctattagatattttcaatggagaaaatctttttcaaggttttataaaacccgtg-tcttacttaggaccct-ac 23333734  T
Q  547 ttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtg 644  Q
    |||||||| ||| ||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||| | ||||  ||||||||||||||| ||||    
T  23333735 ttttaagcgggatccgtacttttttaatattaaaaaattgaaatataataatataaagttattgatatttgatcagtgagtctcatttaagaactgtgtg 23333834  T
Q  645 tgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    || ||||||  ||||||||||| ||||||||||| |||||  ||||||||||||||||||    
T  23333835 tgagatctgggttggagtgattgagtgcttattaagtactattattaaaaaattataaat 23333894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 525 - 743
Target Start/End: Original strand, 43822730 - 43822953
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcaggaccg-cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtg 622  Q
    |||||||| |||||||||| ||||| || | |||||  |||| ||||||||||||||||||||||  || ||||||||| ||||||||||||| ||||||    
T  43822730 gggtcttatttaagaccccaactttaaa-cgggacctacactcttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtg 43822828  T
Q  623 gatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tg 718  Q
    | || ||||||||||||||||||| ||||||  ||||||  ||| |||||||||||| |||| ||||||||||||||||||| | |||||| ||    ||    
T  43822829 ggtcccatttaagaactttgtgtgagatctgggttggaggaattgagtgcttattagatactactattaaaaaattataaatgagtgatgtgtacgcgtg 43822928  T
Q  719 agacccatttaagaaccaaaaaatg 743  Q
     ||||||||||||||||||||||||    
T  43822929 ggacccatttaagaaccaaaaaatg 43822953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 437 - 713
Target Start/End: Original strand, 11120435 - 11120695
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||  ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||  ||                 |||||||||||    
T  11120435 ccattgggagggtcttaactttttaaaactcggtacctattaggtaccttcaatggggagaatcttttccag-----------------ggtcttactta 11120517  T
Q  537 agacccccacttttaagcagga-ccgcact-tttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaa 634  Q
    ||||| | |||||||||| ||| ||||||| |||||||||||||||| |  || ||||||||||||| ||||||||||||| |||||||||   ||||||    
T  11120518 agacctc-acttttaagcgggatccgcactctttttaatattaaaaattaaaatataatgatataaagttattgatagttgattagtggattgtatttaa 11120616  T
Q  635 gaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||||||| ||||||  ||||||| ||| |||| ||||||| |||| |||||||| |||||||||| | ||||||    
T  11120617 gaactttgtgtgagatctgcgttggagtaattgagtgtttattagatactactattaaagaattataaatgagtgatgt 11120695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 528 - 704
Target Start/End: Original strand, 42831601 - 42831780
Alignment:
Q  528 tcttacttaagacccccacttttaagcaggacc-gcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggat 625  Q
    ||||| ||||||| ||||||||||||| ||||| ||||  |||||||||||||||||| |||  |||||||||||||||||||||||||| ||| |||||    
T  42831601 tcttatttaagacacccacttttaagcgggacccgcacacttttaatattaaaaaattaaaatgtaatgatataaaattattgatagttgattaatggat 42831700  T
Q  626 ctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    |||||||||||| ||| |||| ||| ||   ||||||  ||||||| ||||||||||||| |||||||||||||||||||    
T  42831701 ctcatttaagaaatttttgtgagatgctaggttggaggaatttagttcttattaggtactactattaaaaaattataaat 42831780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 457 - 743
Target Start/End: Original strand, 25813622 - 25813913
Alignment:
Q  457 atttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcag 556  Q
    |||||||||  | ||| ||||||||||| ||| ||| | |||| ||||| |  ||||||||||||  ||||||||| ||||||||||||  ||||||| |    
T  25813622 atttaagacctgatacttattaggtaccctcattggggtgaatttttttcaaggtcttataagacacggggtcttatttaagacccccaactttaagcgg 25813721  T
Q  557 gacc-gcacttttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaa 655  Q
    | |  |||   ||||||||||||||| || ||  || ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| ||||||      
T  25813722 ggcttgcaggcttttaatattaaaaatttaaatgtagtgatataaaattattgatagttgattagtgggtctcatttaagaactttgcgtgagatctggg 25813821  T
Q  656 ttggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaatg 743  Q
    |||||| ||   ||| ||||||| ||||| ||||||||||||||||||| | |||||| ||    || |||| ||||||||||| |||||||    
T  25813822 ttggagggaccgagtacttattatgtacttctattaaaaaattataaatgagtgatgtgtacgcgtgggacctatttaagaacccaaaaatg 25813913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 457 - 742
Target Start/End: Original strand, 27544257 - 27544548
Alignment:
Q  457 atttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcag 556  Q
    ||||||||| || || ||||||||||||  || | | ||||| |||||| |  || |||||||||| ||||||||| |||||||||||| | |||||  |    
T  27544257 atttaagacccgatatctattaggtacccccatttgggagaaactttttcaaggttttataagactcggggtcttatttaagacccccaatcttaagtgg 27544356  T
Q  557 gaccg-cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctga 654  Q
    ||||  |||| ||||||||||||||| ||||||  ||||||  |||| ||| ||||| ||||||| ||| ||||||||||||||| |||||  ||||||     
T  27544357 gacccacactcttttaatattaaaaagttgaaatgtaatgacttaaagttagtgataattgtttaatgggtctcatttaagaactgtgtgtcagatctgg 27544456  T
Q  655 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttt----atgagacccatttaagaaccaaaaaat 742  Q
     |||||| |||| |||||||||||| | ||  |||||||||||||||||| | |||||| |    |||||||||||||||| ||||||||||    
T  27544457 gttggagggattgagtgcttattagatgctattattaaaaaattataaatgagtgatgtgtacacatgagacccatttaagtaccaaaaaat 27544548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 448 - 681
Target Start/End: Complemental strand, 40287232 - 40287000
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||  ||||||||| |||||| ||||||||| || ||  || |||||| ||||| || ||||||||||||  || |||||||||||||||| ||      
T  40287232 gtcttaaacatttaagacccggtacgtattaggtatct-catcggggagaatatttttcagggtcttataagacccggagtcttacttaagacccacaac 40287134  T
Q  548 tttaagcaggaccg-cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 645  Q
    ||||||| |||||  ||| ||||||||||||||||||| |||  ||||||||  |||||||||||||||| |||| || || ||||||| ||||||||||    
T  40287133 tttaagcgggacccacacctttttaatattaaaaaattaaaatgtaatgata--aaattattgatagttgattagcgggtcccatttaataactttgtgt 40287036  T
Q  646 gtgatctgaattggagtgatttagtgcttattaggt 681  Q
    | ||||||  |||||| |||||||||||||||||||    
T  40287035 gagatctgggttggagggatttagtgcttattaggt 40287000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 510 - 704
Target Start/End: Original strand, 13983976 - 13984172
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcag-gaccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattatt 607  Q
    ||||||||||||  ||||||||| |||||||| |||  ||||||| | |||  |||  ||||||||||||||||||||||  || ||||||||| |||||    
T  13983976 gtcttataagacatggggtcttatttaagacctccaactttaagcggagacaacacgcttttaatattaaaaaattgaaatgtagtgatataaagttatt 13984075  T
Q  608 gatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    |||||||| ||||| | ||||||||||||| |||||||| ||||||  || ||| |||| ||| |||||||| |||| |||||||||||||||||||    
T  13984076 gatagttgattagtaggtctcatttaagaattttgtgtgagatctgggttagagagattgagtacttattagatactactattaaaaaattataaat 13984172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 563 - 761
Target Start/End: Complemental strand, 52353920 - 52353716
Alignment:
Q  563 acttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattgga 660  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| |   ||||||||| |||||||| ||| |||  |||||    
T  52353920 acttttttaatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggttctatttaagaaatttgtgtgagatgctgc-ttgga 52353822  T
Q  661 gtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaatgagtgt-ttcattg 755  Q
    | |||  ||||||||||||||||||||||||||||||||||||| | |||||| ||    || |||||||||||| |||  |||||| |||| |||||||    
T  52353821 gggatcgagtgcttattaggtactgctattaaaaaattataaattagtgatgtgtacacgtgggacccatttaagtaccctaaaatgtgtgtcttcattg 52353722  T
Q  756 tggatg 761  Q
    ||||||    
T  52353721 tggatg 52353716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 451 - 614
Target Start/End: Original strand, 38901886 - 38902051
Alignment:
Q  451 ttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccactttt 550  Q
    ||||||||||||||| |||| |||||||||||||| |||||| | |||||||||| || ||||||||||||  ||  ||||| ||||||| |  ||||||    
T  38901886 ttaactatttaagacccggtgcctattaggtacctccaatggggggaatctttttcagggtcttataagacccggaatcttatttaagactcatactttt 38901985  T
Q  551 aagcaggac-cgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagtt 614  Q
    |||| |||| || ||| |||||||||||||||||| ||| ||||||||||||| ||||| ||||||    
T  38901986 aagcgggactcgtactcttttaatattaaaaaattaaaatataatgatataaagttattaatagtt 38902051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 446 - 744
Target Start/End: Original strand, 36166766 - 36167069
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||  ||||||||||||||||||||||||||||| || ||| |  ||| ||||| |  |||||||||||     ||||||| ||||||||||||    
T  36166766 gggtcttaaacatttaagactcggtacctattaggtacctccattggggtcaatttttttcaaggtcttataagatccatggtcttatttaagaccccca 36166865  T
Q  546 cttttaagcaggacc-gcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
      ||||||| || || ||||  ||||||||| |||||||| |||  || ||||||||| ||||||||||||  ||||||  ||  ||||||||| |||||    
T  36166866 actttaagcggggcccgcacgcttttaatatgaaaaaattaaaatgtagtgatataaagttattgatagtttattagtgagtccaatttaagaattttgt 36166965  T
Q  644 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaa 739  Q
    |||  || |   ||||||  ||| |||  |||||||||||| | |||||||||||||||||||||||||| ||    || ||||||||||||||| ||||    
T  36166966 gtgacatttaggttggaggaattgagtaattattaggtactac-attaaaaaattataaataaatgatgtgtacatgtgggacccatttaagaactaaaa 36167064  T
Q  740 aatga 744  Q
    |||||    
T  36167065 aatga 36167069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 446 - 623
Target Start/End: Original strand, 36297858 - 36298036
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    ||||||||||||||||| |  ||||| ||||||||||||| || ||| |||| | ||||| || ||||  ||||||  | ||| |||||||||||| |||    
T  36297858 gggtcttaactatttaaaatccggtatctattaggtacctccattggggagagtatttttcagggtctcctaagacc-gaggttttacttaagacctcca 36297956  T
Q  546 cttttaagcaggaccg-cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtgg 623  Q
    |||||||||  ||||  |||| ||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  36297957 cttttaagcgagaccctcactattttaatattaaaaaattgaaatgtaatgatataaaattattgatagttgattagtgg 36298036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 562 - 713
Target Start/End: Complemental strand, 32851892 - 32851740
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattgga 660  Q
    |||| ||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||  || ||||||||||||| ||| | ||||||   ||||    
T  32851892 cactcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtgtgtcccatttaagaacttcgtgggagatctgggatgga 32851793  T
Q  661 gtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |  ||| | |||||||||| |||| ||||||||||||| ||||| | ||||||    
T  32851792 ggaattgattgcttattagatactactattaaaaaattgtaaatgagtgatgt 32851740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 567 - 693
Target Start/End: Complemental strand, 44665444 - 44665316
Alignment:
Q  567 ttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtga 664  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| || ||||||||||  ||||| || ||| ||| ||||||| ||    
T  44665444 ttttaatattaaaaaattgaaatataatgatataaaattattgatagttgattagtgtatttcatttaagagatttgtatgagatactggattggagcga 44665345  T
Q  665 tttagtgcttattaggtactgctattaaa 693  Q
    || ||| |||||||| || | ||||||||    
T  44665344 ttgagtacttattagatattactattaaa 44665316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 437 - 519
Target Start/End: Complemental strand, 24556024 - 24555942
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataag 519  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||   ||||| |||||||||||| || ||||||||||    
T  24556024 ccattggatgggtcttaactatttaagacccgttacctattaggtacccctaatggggagaatctttttcagggtcttataag 24555942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 562 - 704
Target Start/End: Complemental strand, 11241612 - 11241468
Alignment:
Q  562 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtga-tctgaattgg 659  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||||  | ||||| || ||||||||  | | || |||||    
T  11241612 cacttttttaatattataaaattgaaatataatgatataaagttattgatagttgattagtggataccttttaaaaaatttgtgtgaaattatggattgg 11241513  T
Q  660 agtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    ||  |||  ||| |||||| |||||  ||||||||||||||||||    
T  11241512 aggaattgggtgtttattatgtactaatattaaaaaattataaat 11241468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 501 - 703
Target Start/End: Complemental strand, 49003558 - 49003354
Alignment:
Q  501 tttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggaccgcacttttttaatattaaaaaattgaaaa-taatgatata 599  Q
    |||||||  ||| |||||||||  |||||||||||||||| |||| | ||||    |||| ||| ||||||||||||||||||||  |  ||||  ||||    
T  49003558 tttttgaaggtcctataagactcagggtcttacttaagactcccaatcttaaatgagaccacacctttttaatattaaaaaattgttatgtaattgtata 49003459  T
Q  600 aaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaatt 698  Q
    || ||||||||||||| || |||| ||| ||||||||| |||||||| ||| ||   |||||| |||| | | ||||||||||| | |||||||||||||    
T  49003458 aagttattgatagttgatttgtgggtctaatttaagaattttgtgtgagatgctcggttggagagattgaatacttattaggtattactattaaaaaatt 49003359  T
Q  699 ataaa 703  Q
    |||||    
T  49003358 ataaa 49003354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 566 - 704
Target Start/End: Original strand, 51263185 - 51263323
Alignment:
Q  566 tttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg-tgatctgaattggagtg 663  Q
    ||||||||||||||||||| ||| ||||||| ||||| ||||||||||||| ||||||  | ||||||||||| |||||| | ||  |||||||| | ||    
T  51263185 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtttcatttaagaaatttgtgagatg--ctgaattgaaatg 51263282  T
Q  664 atttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    ||| |||||| ||||||||||  |||| |||| ||||||||    
T  51263283 attgagtgctcattaggtactattattgaaaatttataaat 51263323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 659 - 748
Target Start/End: Original strand, 38902053 - 38902146
Alignment:
Q  659 gagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaatgagtgt 748  Q
    |||||||  ||||||||||||||||| ||||||||||||||||||| | |||| | ||    ||||||||||||||||||| ||||||||||||    
T  38902053 gagtgatcgagtgcttattaggtactactattaaaaaattataaatgagtgatatgtacacgtgagacccatttaagaacccaaaaatgagtgt 38902146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 566 - 743
Target Start/End: Complemental strand, 51504663 - 51504479
Alignment:
Q  566 tttttaatattaaaaaattgaaaa--taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagt 662  Q
    ||||||||||||||||||||||||  |  ||||||||||||||| ||||||| | ||||| ||  |||||||||  ||||||| |||  ||  ||||||     
T  51504663 tttttaatattaaaaaattgaaaatgttgtgatataaaattattaatagttgataagtgggtcctatttaagaaacttgtgtgggatgatgggttggagg 51504564  T
Q  663 gatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaatg 743  Q
     ||| ||| |||| || ||||| ||||||||||||||||||| | |||||| ||    ||||||||||||||| ||||| |||||    
T  51504563 aattgagtacttaatacgtactactattaaaaaattataaatgagtgatgtatacacgtgagacccatttaagcaccaacaaatg 51504479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 541 - 613
Target Start/End: Complemental strand, 24555939 - 24555864
Alignment:
Q  541 ccccacttttaagcaggacc-gcacttttttaatattaaaaaa-ttgaaa-ataatgatataaaattattgatagt 613  Q
    |||||||||||||| ||||| ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||    
T  24555939 ccccacttttaagcgggacccgcactcttttaatattaaaaaaattgaaatataatgatataaaattattgatagt 24555864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 621
Target Start/End: Complemental strand, 31133240 - 31133165
Alignment:
Q  547 ttttaagcaggaccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagt 621  Q
    ||||||| |||||| |||||||||||||||||| |||| |||  ||||||||| |||||||||||||||| |||||    
T  31133240 ttttaagtaggaccacacttttttaatattaaataatttaaatgtaatgatatgaaattattgatagttgattagt 31133165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 494 - 646
Target Start/End: Complemental strand, 11570114 - 11569965
Alignment:
Q  494 gagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggaccgcacttttttaatattaaaaaattgaaaa-taa 592  Q
    ||||| ||||||  ||||||||||||||| | | |||||||||||||||||| | ||||    |||| ||||||||  |||||||||||||||||  |||    
T  11570114 gagaaacttttttggagtcttataagactcgtg-tcttacttaagacccccaatcttaaatgagacc-cacttttt--atattaaaaaattgaaatgtaa 11570019  T
Q  593 tgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 646  Q
    ||||||||| ||||||||||||| ||| |   |||||||| |||| ||||||||    
T  11570018 tgatataaagttattgatagttgattaataagtctcatttgagaaatttgtgtg 11569965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 655 - 703
Target Start/End: Original strand, 42401085 - 42401133
Alignment:
Q  655 attggagtgatttagtgcttattaggtactgctattaaaaaattataaa 703  Q
    |||||||||| | |||||||||||||||||| |||||||||||||||||    
T  42401085 attggagtgactgagtgcttattaggtactgttattaaaaaattataaa 42401133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 563 - 645
Target Start/End: Complemental strand, 51061753 - 51061670
Alignment:
Q  563 acttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 645  Q
    |||||||||| |||||||||||||||  |||||||| ||| ||||||||||| | |||| || || |||||||||| |||||||    
T  51061753 acttttttaaaattaaaaaattgaaatgtaatgatagaaagttattgatagtagattagcgggtcccatttaagaaatttgtgt 51061670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 654 - 703
Target Start/End: Complemental strand, 37583091 - 37583042
Alignment:
Q  654 aattggagtgatttagtgcttattaggtactgctattaaaaaattataaa 703  Q
    ||||||||||| | ||||||||||||||| || |||||||||||||||||    
T  37583091 aattggagtgactaagtgcttattaggtattgttattaaaaaattataaa 37583042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 447 - 516
Target Start/End: Original strand, 42831537 - 42831606
Alignment:
Q  447 ggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttat 516  Q
    ||||||||  |||||||||||||||||||||||||||  ||| |||  ||||||||||| ||| ||||||    
T  42831537 ggtcttaatcatttaagactcggtacctattaggtactctcattgggaagaatctttttcagactcttat 42831606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 673 - 717
Target Start/End: Complemental strand, 23655202 - 23655158
Alignment:
Q  673 ttattaggtactgctattaaaaaattataaataaatgatgtttat 717  Q
    |||||| |||||  |||||||||||||||||||||||||||||||    
T  23655202 ttattaagtactattattaaaaaattataaataaatgatgtttat 23655158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 655 - 699
Target Start/End: Original strand, 31827237 - 31827281
Alignment:
Q  655 attggagtgatttagtgcttattaggtactgctattaaaaaatta 699  Q
    |||| |||||| ||||||||||||||||||| |||||||||||||    
T  31827237 attgaagtgatctagtgcttattaggtactgttattaaaaaatta 31827281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 655 - 703
Target Start/End: Complemental strand, 42483745 - 42483697
Alignment:
Q  655 attggagtgatttagtgcttattaggtactgctattaaaaaattataaa 703  Q
    |||||| ||||| |||||||||||| ||||| |||||||||||||||||    
T  42483745 attggaatgattgagtgcttattagatactgttattaaaaaattataaa 42483697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 562 - 634
Target Start/End: Complemental strand, 3623176 - 3623108
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaa 634  Q
    ||||||||||||||||||||| |    |||||||| |||| ||||||||||||| |||||  |||||||||||    
T  3623176 cacttttttaatattaaaaaaat----ataatgatctaaagttattgatagttgattagtaaatctcatttaa 3623108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 668 - 703
Target Start/End: Original strand, 20558608 - 20558643
Alignment:
Q  668 agtgcttattaggtactgctattaaaaaattataaa 703  Q
    |||||||||||||||||| |||||||||||||||||    
T  20558608 agtgcttattaggtactgttattaaaaaattataaa 20558643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 655 - 713
Target Start/End: Complemental strand, 30627142 - 30627084
Alignment:
Q  655 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||| ||| ||| |||| ||||||||  |||||||||||||||||||| ||||||    
T  30627142 attggagtcattaagtccttaataggtacttttattaaaaaattataaataagtgatgt 30627084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 655 - 713
Target Start/End: Original strand, 32913943 - 32914001
Alignment:
Q  655 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||||||| ||| | |||||| ||||  ||||||||||||||||| |||||||||    
T  32913943 attggagtgattgagtacctattagatactattattaaaaaattataaaaaaatgatgt 32914001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 668 - 713
Target Start/End: Original strand, 37073763 - 37073808
Alignment:
Q  668 agtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||| ||||||| ||||  |||||||||||||||||||||||||||    
T  37073763 agtgtttattagatactagtattaaaaaattataaataaatgatgt 37073808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 5e-56; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 437 - 704
Target Start/End: Complemental strand, 6711131 - 6710861
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||  |||||||||||||| |||||  |||| |||||||||||||||||||| |||||| ||||| |  |||||||||||||  |||| |||||||    
T  6711131 ccattgggagggtcttaactattcaagacatggtatctattaggtaccttcaatggggagaatatttttcaatgtcttataagactcagggttttactta 6711032  T
Q  537 agacccccacttttaagcaggacc-gcacttttttaatattaaaaaattgaaaa--taatgatataaaattattgatagttgtttagtggatctcattta 633  Q
    |||||||||||||||| | | ||| |||||||| ||||||||||||| | ||||  |||||||||||| ||||||||||||| ||| | |||   |||||    
T  6711031 agacccccacttttaaacggaacctgcacttttataatattaaaaaaattaaaatgtaatgatataaagttattgatagttgattaattgattctattta 6710932  T
Q  634 agaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    ||||||||||||| |||||   ||||||||| | |||||||||||| |||| |||||||||||||||||||    
T  6710931 agaactttgtgtgagatctaggttggagtgactgagtgcttattagatactactattaaaaaattataaat 6710861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 480 - 742
Target Start/End: Original strand, 9583050 - 9583318
Alignment:
Q  480 gtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcagga-ccgcacttttttaatattaa 578  Q
    ||||||||||||| |||||| ||||| |||||||||||||||  | |||||||||||||| || |||||| |||| ||| ||||||| |||||||  |||    
T  9583050 gtaccttcaatggggagaatattttttagagtcttataagacctgaggtcttacttaagatcctcactttaaagcgggatccgcactcttttaatgataa 9583149  T
Q  579 aaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttatt 677  Q
    |||||||||| |||||||| |||| ||||||| | ||| ||||||| ||  |||||||||||||||||| ||||||| || |||||||| ||||||||||    
T  9583150 aaaattgaaatataatgatgtaaagttattgacaattgattagtgggtccaatttaagaactttgtgtgagatctgagtttgagtgattgagtgcttatt 9583249  T
Q  678 aggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaat 742  Q
    || |||| ||||||||||||||||||||| |||||  ||    |||||| |||||||||||| ||||||    
T  9583250 agatactactattaaaaaattataaataagtgatgcgtacacgtgagactcatttaagaacccaaaaat 9583318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 446 - 766
Target Start/End: Original strand, 11921818 - 11922145
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||  ||||||||| || |||||||||||||||| || ||| ||||| |||||| || ||||||||||||  ||||||||||||||||||||||    
T  11921818 gggtcttaaacatttaagacccgatacctattaggtacctccattggggagaaacttttttagggtcttataagacccggggtcttacttaagaccccca 11921917  T
Q  546 cttttaagcaggac-cgcacttttttaatattaaaaaatt-gaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
     | |||||| |||| | |||  |||||||||||||||||| |||  |||||||||||| |||||| |||||| ||||| | || |||||||||| |||||    
T  11921918 atcttaagcgggactcacacacttttaatattaaaaaattagaatctaatgatataaagttattggtagttgattagtaggtcccatttaagaaatttgt 11922017  T
Q  644 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaa 739  Q
    ||| ||| ||  ||||||  ||| ||||||| ||||||||| ||||||||||||||||||| | | |||| ||    ||||||||||||||| |   |||    
T  11922018 gtgagatttgggttggaggaattgagtgctttttaggtactactattaaaaaattataaatgagtaatgtgtacacgtgagacccatttaagtaattaaa 11922117  T
Q  740 aatgagtgt-ttcattgtggatggtctt 766  Q
    ||||||||| | ||||||||||| ||||    
T  11922118 aatgagtgtctccattgtggatgctctt 11922145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 473 - 748
Target Start/End: Complemental strand, 14773147 - 14772867
Alignment:
Q  473 ctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacc-gcactttttta 571  Q
    |||||||||| ||||| ||||| |||| ||||| | |||||||||||| |   ||||||| ||||||||| ||  ||||||| || || |||| ||||||    
T  14773147 ctattaggtatcttcattggagtgaatttttttcaaagtcttataagaattatggtcttatttaagaccctcaactttaagcggggcctgcacgttttta 14773048  T
Q  572 atattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtg 671  Q
    |||||||||||||||||   |   |||||| ||||||||||||| ||| ||  || ||||||||||||||||||| ||||||  ||||||  ||| |||     
T  14773047 atattaaaaaattgaaatgcagtgtataaagttattgatagttgattaatgagtcccatttaagaactttgtgtgagatctgtgttggaggaattgagta 14772948  T
Q  672 cttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaatgagtgt 748  Q
    |||||||||||||  | |||||||||||||||| |||||||| ||    ||||||||||||||||||  ||||||| ||||    
T  14772947 cttattaggtactattgttaaaaaattataaatgaatgatgtgtacgcgtgagacccatttaagaactcaaaaatgggtgt 14772867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 448 - 713
Target Start/End: Original strand, 26312349 - 26312614
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||  ||||||||| || ||||||||||||||   || | | ||||| |||||   |||||||||||||    | ||||||||||||||||||| |    
T  26312349 gtcttaaacatttaagacccgatacctattaggtactcccattagggagaaacttttccggagtcttataagaacctgagtcttacttaagacccccaat 26312448  T
Q  548 tttaagcaggaccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 646  Q
     |||||| || || |||| || |||||||||||||| ||||  |||||| ||||| |||||| |||||| ||||||| |   |||||| || ||||||||    
T  26312449 cttaagcggg-ccacactcttctaatattaaaaaatagaaatgtaatgacataaagttattggtagttgattagtgggttctatttaataaatttgtgtg 26312547  T
Q  647 tgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
     ||||||| ||||||  ||| ||||||||||||||||| ||||||||||||||||||| | ||||||    
T  26312548 agatctgagttggaggaattgagtgcttattaggtactactattaaaaaattataaatgagtgatgt 26312614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 457 - 643
Target Start/End: Complemental strand, 44887479 - 44887291
Alignment:
Q  457 atttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcag 556  Q
    |||||||||||||||| ||||||||||||||| | ||||||| ||||||  |  |||||||||||  | ||||| |||| |||||  || ||||||||||    
T  44887479 atttaagactcggtacttattaggtaccttcattagagagaaactttttcgggatcttataagacatgtggtctcacttgagacctacaattttaagcag 44887380  T
Q  557 gaccgcactt-ttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
    ||    | || |||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||| || |||||    
T  44887379 gattcaaattcttttaatattaaaaaattgaaatataatgatataaatttattgatagttgattattggatctcatttaaaaaatttgt 44887291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 448 - 713
Target Start/End: Original strand, 34374926 - 34375191
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccc-ac 546  Q
    |||||||| |||||||| |||||||||||||||||||  ||  ||| ||||||||||| || ||||||||||||  | ||||||||||||||||||| |     
T  34374926 gtcttaaccatttaagattcggtacctattaggtacccccatggga-agaatctttttcagggtcttataagacctgaggtcttacttaagacccccaaa 34375024  T
Q  547 ttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtg 644  Q
    |  ||||  | | |  ||||||||||||||| |||||||||||  |||| ||||||| ||||||||||||| ||| ||| || |||||||||  ||| |     
T  34375025 tcataagtggaatcatcacttttttaatatt-aaaaattgaaatgtaataatataaagttattgatagttgattaatgggtcccatttaaga--tttttt 34375121  T
Q  645 tgtgatctga-attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    || ||||| |  |||||| |||| | | ||||||||||||| ||||||||||||||||||||| ||||||    
T  34375122 tgagatcttaggttggagggattgaattcttattaggtactactattaaaaaattataaataagtgatgt 34375191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 446 - 645
Target Start/End: Original strand, 40999552 - 40999753
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||  |||||||| |||||| ||||| |||||||||| |||  |||| |||||| || ||||||||| | |  |||||| ||||||||||| ||    
T  40999552 gggtcttaaacatttaagattcggtatctatttggtaccttcattgggaagaaactttttcagggtcttataaaatttagggtctcacttaagaccctca 40999651  T
Q  546 cttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
     | |||||  ||| || ||||| ||||||||||||| ||||||| ||||||||||||| |||||||| |||| ||||||| |  |||||||||| |||||    
T  40999652 atcttaagtgggacccacacttgtttaatattaaaagattgaaatataatgatataaagttattgatggttgattagtgggttccatttaagaaatttgt 40999751  T
Q  644 gt 645  Q
    ||    
T  40999752 gt 40999753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 448 - 713
Target Start/End: Complemental strand, 41069036 - 41068777
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    ||||||| ||| ||||||  ||||||||||||| ||   || ||||||||| ||||||  |||||||||||||||  |||||| ||||||||| | || |    
T  41069036 gtcttaaatatataagacatggtacctattaggaactcccattggagagaaacttttttggagtcttataagactcagggtctcacttaagactctcaat 41068937  T
Q  548 tttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttg-tttagtggatctcatttaagaactttgtg 644  Q
    ||||||  ||| || ||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||| || ||||||    
T  41068936 tttaagtgggacccacactttttt-ata-taaaaaattgaaatataatgatataaagttattgatagttgatttagtgg-tctcatttaaaaattttgtg 41068840  T
Q  645 tgtgatctgaattggagtgatttagtgctta-ttaggtactgctattaaaaaattataaataaatgatgt 713  Q
    || ||   ||    || ||||| |||||||| ||| ||||| ||||| ||||||||||||| ||||||||    
T  41068839 tgaga---ga----gaatgattgagtgcttatttaagtactactatttaaaaattataaatgaatgatgt 41068777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 451 - 646
Target Start/End: Complemental strand, 36887814 - 36887617
Alignment:
Q  451 ttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccactttt 550  Q
    ||||| ||||||||  || |||||||||||||| |  | ||| ||||||  |||| |  |||||||||||   ||||| |||||||||| |   ||||||    
T  36887814 ttaaccatttaagatccgatacctattaggtacttctattggggagaattattttcaaggtcttataagatcgggggttttacttaagatcttaactttt 36887715  T
Q  551 aagcaggaccg-cacttttttaatattaaaaaattgaaaat-aatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 646  Q
    || | |||||  |||| ||||||||||||||||||||||   ||||||||||| ||||||||||||| ||||||||||||||||||||| ||| ||||    
T  36887714 aaacgggaccctcactcttttaatattaaaaaattgaaatgcaatgatataaatttattgatagttgattagtggatctcatttaagaattttttgtg 36887617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 566 - 703
Target Start/End: Complemental strand, 65522 - 65383
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtg 663  Q
    |||||||||| ||||||||||||  |||||||| ||| ||||||||||||| ||| ||| |||||||||| || |||||||| |||  || ||||||| |    
T  65522 tttttaatataaaaaaattgaaatgtaatgatacaaacttattgatagttgattaatggttctcatttaataaatttgtgtgagatgttggattggaggg 65423  T
Q  664 atttagtgcttattaggtactgctattaaaaaattataaa 703  Q
    ||| |||| |||||| ||||| | ||||||||||||||||    
T  65422 attaagtgtttattatgtactacaattaaaaaattataaa 65383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 527 - 664
Target Start/End: Original strand, 45135717 - 45135855
Alignment:
Q  527 gtcttacttaagacccccacttttaagc-aggaccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtgga 624  Q
    ||||||||||||||| |||||||||||| ||  ||||||| ||||||||||||| || ||||| ||||||||||||| ||||||||||||| || ||||     
T  45135717 gtcttacttaagacctccacttttaagcgagacccgcactcttttaatattaaataactgaaatataatgatataaagttattgatagttgatttgtggg 45135816  T
Q  625 tctcatttaagaactttgtgtgtgatctgaattggagtga 664  Q
    || ||||||| |||||||| ||  |||||  |||||||||    
T  45135817 tc-catttaaaaactttgtatgatatctgggttggagtga 45135855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 567 - 710
Target Start/End: Original strand, 5038707 - 5038854
Alignment:
Q  567 ttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggat--ctcatttaagaactttgtgtgtgat-ctgaattggagt 662  Q
    |||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||| |  | || ||||||| |||||||| ||| | |  ||||||     
T  5038707 ttttaatattaaaaaattaaaatataataatataaaattattgatagttgattagtgggtcacacaattaagaaatttgtgtgagatgccgggttggaga 5038806  T
Q  663 gatttagtgcttattaggtactgctattaaaaaattataaataaatga 710  Q
    |||| | |||||||||  ||||  ||||||||||||||||||||||||    
T  5038807 gattgaatgcttattaattactattattaaaaaattataaataaatga 5038854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 562 - 709
Target Start/End: Complemental strand, 32887735 - 32887588
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattgga 660  Q
    |||| |||||||||||||||||| |||  |||| ||||||| ||||| ||||||| ||||||||| | |||||| || ||| ||||  ||||| ||||||    
T  32887735 cactcttttaatattaaaaaattaaaatgtaataatataaagttatttatagttgattagtggattt-atttaaaaaatttatgtgatatctggattgga 32887637  T
Q  661 gtgatttagtgcttattaggtactgctattaaaaaattataaataaatg 709  Q
    | |||| | ||||||||||| ||  ||||||||||||||||||| ||||    
T  32887636 gagattgaatgcttattaggcaccactattaaaaaattataaatgaatg 32887588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 565 - 704
Target Start/End: Original strand, 3668832 - 3668973
Alignment:
Q  565 ttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagt 662  Q
    |||| ||||||||||||||| |||  ||||||||||||||||| |||||||  ||||||| ||| ||||||||| ||||||||  ||  ||| |||||      
T  3668832 ttttgtaatattaaaaaattaaaacgtaatgatataaaattatcgatagttaattagtggttcttatttaagaaatttgtgtgatatattgagttggacg 3668931  T
Q  663 gatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    |||| ||| |||||||  |||| |||||||||||||||||||    
T  3668932 gattgagtacttattaattactactattaaaaaattataaat 3668973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 447 - 614
Target Start/End: Original strand, 30465136 - 30465306
Alignment:
Q  447 ggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccac 546  Q
    ||||||||||||||||||||| |||  ||||||||| ||||| ||  |||||||||||| |  || |||||||||  | |||||||||||| | |  |||    
T  30465136 ggtcttaactatttaagactcagtatttattaggtatcttcattgtggagaatctttttcaaggttttataagacccgaggtcttacttaataacttcac 30465235  T
Q  547 ttttaagcagga-ccgcacttttttaatattaaaaaattgaaaat--aatgatataaaattattgatagtt 614  Q
    |||||||| | | || |||| ||||||||||||||||||  ||||  | | ||||||| ||||||||||||    
T  30465236 ttttaagcggtacccccactcttttaatattaaaaaatttgaaattgagtaatataaagttattgatagtt 30465306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 562 - 643
Target Start/End: Original strand, 6459070 - 6459152
Alignment:
Q  562 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| |||||   ||||||||| ||| |||||    
T  6459070 cacttttttaatattaaaaaattaaaatataatgatagaaaattattgatagttgattagtaagtctcatttacgaaatttgt 6459152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 494 - 634
Target Start/End: Original strand, 39368657 - 39368798
Alignment:
Q  494 gagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggaccg-cacttttttaatattaaaaaattgaaaa-ta 591  Q
    |||||||||||| || ||||||||||||  |  |||||| |||||||||| |||||||| | |||||  | ||||||||||||| |||||||||||  ||    
T  39368657 gagaatctttttcagggtcttataagacccgaagtcttatttaagacccc-acttttaaacgggaccctcccttttttaatattcaaaaattgaaatgta 39368755  T
Q  592 atgatataaaattattgatagttgtttagtggatctcatttaa 634  Q
    |  ||||||||||||||||||||| ||| |||||  |||||||    
T  39368756 aaaatataaaattattgatagttgattaatggattccatttaa 39368798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 560 - 704
Target Start/End: Complemental strand, 16118047 - 16117901
Alignment:
Q  560 cgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaatt 657  Q
    ||||| |||||||||||||||||| |  | ||||||||||||| ||||||||||||| || ||||||  |||||| | | | |||||| ||| |    ||    
T  16118047 cgcacctttttaatattaaaaaatggttatataatgatataaagttattgatagttgatttgtggataccatttatggaatatgtgtgagatgcatggtt 16117948  T
Q  658 ggagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    ||||  ||| ||||||||||||||| || ||||||||||||||||||    
T  16117947 ggaggaattgagtgcttattaggtattgatattaaaaaattataaat 16117901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 566 - 643
Target Start/End: Original strand, 34234879 - 34234957
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||| ||| ||||||| ||| |||||| || |||||    
T  34234879 tttttaatattaaaaaattgaaatgtaatgatataaagttattgataattgattagtgggtctaatttaataaatttgt 34234957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 568 - 646
Target Start/End: Original strand, 26297112 - 26297191
Alignment:
Q  568 tttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 646  Q
    |||||||||||||||||||||  |  ||||||||| ||||||||||||| |||  ||||| |||||||||||||| ||||    
T  26297112 tttaatattaaaaaattgaaatgtggtgatataaagttattgatagttgattatcggatcccatttaagaactttatgtg 26297191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 629 - 742
Target Start/End: Complemental strand, 37347905 - 37347784
Alignment:
Q  629 atttaagaactttgtgtgtgat----ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgag 720  Q
    |||||||||||||||||| |||    |||  |||||| |||| | | |||||||| || | |||||||||||||||||||||||||||| ||    ||||    
T  37347905 atttaagaactttgtgtgagatgatgctgggttggagggattgaattcttattagatattactattaaaaaattataaataaatgatgtgtacacgtgag 37347806  T
Q  721 acccatttaagaaccaaaaaat 742  Q
    | ||||||||||||| ||||||    
T  37347805 atccatttaagaacccaaaaat 37347784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 565 - 622
Target Start/End: Complemental strand, 13022854 - 13022796
Alignment:
Q  565 ttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtg 622  Q
    ||||||||||||||||||||||||  |||| ||||||| ||||||||||||| ||||||    
T  13022854 ttttttaatattaaaaaattgaaatgtaataatataaatttattgatagttgattagtg 13022796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 483
Target Start/End: Original strand, 45135657 - 45135691
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtac 483  Q
    |||||||||||||||||||||||||||||||||||    
T  45135657 tcttaactatttaagactcggtacctattaggtac 45135691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 590 - 693
Target Start/End: Original strand, 18970016 - 18970120
Alignment:
Q  590 taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtga-tctgaattggagtgatttagtgcttattaggtactgcta 688  Q
    |||| ||||||| ||||| ||||||| ||||||  | ||||||||||| |||||||| ||  |||| ||| || |||| |||| |||||||||||| |||    
T  18970016 taattatataaagttattaatagttgattagtgagtttcatttaagaaatttgtgtgagaggctgagttgaagagattgagtgtttattaggtactacta 18970115  T
Q  689 ttaaa 693  Q
    |||||    
T  18970116 ttaaa 18970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 658 - 713
Target Start/End: Original strand, 4634045 - 4634100
Alignment:
Q  658 ggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    ||||||||| ||| |||||||||||||  ||||||||||||||| | |||||||||    
T  4634045 ggagtgattgagttcttattaggtactattattaaaaaattatacaaaaatgatgt 4634100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 565 - 617
Target Start/End: Original strand, 6562936 - 6562988
Alignment:
Q  565 ttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtt 617  Q
    ||||||||||||||||| ||||||  |||||||||||| |||||||||||||||    
T  6562936 ttttttaatattaaaaa-ttgaaatgtaatgatataaagttattgatagttgtt 6562988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 672 - 746
Target Start/End: Original strand, 28857181 - 28857259
Alignment:
Q  672 cttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaatgagt 746  Q
    ||||||| ||| | ||| ||||||||||||||||||| |||| ||    | ||||||||||||| ||||||||||||||    
T  28857181 cttattaagtattactactaaaaaattataaataaattatgtgtataagtaagacccatttaagtaccaaaaaatgagt 28857259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 672 - 713
Target Start/End: Original strand, 41000006 - 41000047
Alignment:
Q  672 cttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||| ||||||| |||||||| ||||||||||||||||    
T  41000006 cttattagatactgcttttaaaaaactataaataaatgatgt 41000047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 2e-55; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 487 - 748
Target Start/End: Complemental strand, 32658633 - 32658367
Alignment:
Q  487 caatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggaccg-cacttttttaatattaaaaaattg 585  Q
    |||||| |||||||||||  ||  ||||| |||||| |||||||||||| |||| || |||||||||| |||||  |||| ||||||||||||||||||     
T  32658633 caatggggagaatcttttacagtatcttaaaagacttggggtcttacttcagactcc-acttttaagcgggacccacactcttttaatattaaaaaatta 32658535  T
Q  586 aaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtact 684  Q
    ||| ||| ||||||||| ||||||||||||| |||||||||  ||||||||||||||||||| ||| ||  |||||||||||||||| ||||||||||||    
T  32658534 aaatatactgatataaagttattgatagttgattagtggattccatttaagaactttgtgtgagatatgggttggagtgatttagtgtttattaggtact 32658435  T
Q  685 gctattaaaaaattataaataaatgatgttt----atgagacccatttaagaaccaaaaaatgagtgt 748  Q
     ||||||||||||||||||| | |||||| |     ||||||||||||||||||| ||||||||||||    
T  32658434 actattaaaaaattataaatgagtgatgtgtccacgtgagacccatttaagaacctaaaaatgagtgt 32658367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 437 - 743
Target Start/End: Complemental strand, 5002627 - 5002315
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||| |||||||||||||||||||  ||||||||||||||||||  |||||  |||||||||||  |||||| |||||||   ||||||||| | |    
T  5002627 ccattggaagggtcttaactatttaagatccggtacctattaggtaccc-caatgaggagaatcttttacagagtcctataagatatggggtcttattaa 5002529  T
Q  537 agacccccacttttaagcaggacc-gcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaa 634  Q
    ||||||| ||||| |||| ||||| ||||| |||||||||| ||||||||||| ||||| ||||||| ||||||||||||| ||||||| || |||||||    
T  5002528 agacccc-actttgaagcgggacccgcactcttttaatatttaaaaattgaaatataataatataaagttattgatagttgattagtgggtcccatttaa 5002430  T
Q  635 gaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgct--attaaaaaattataaataaatgatgttta----tgagacccattt 728  Q
    |||||||||||| |||||   ||||||||||| |||||||||||| |||| ||  |  |||||||||||||||| |||||| ||    | ||||||||||    
T  5002429 gaactttgtgtgagatctcggttggagtgattgagtgcttattagatactactacaaaaaaaaattataaataagtgatgtgtacacgtaagacccattt 5002330  T
Q  729 aagaaccaaaaaatg 743  Q
    || |||| |||||||    
T  5002329 aaaaacccaaaaatg 5002315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 525 - 698
Target Start/End: Complemental strand, 22281938 - 22281763
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcaggacc-gcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtg 622  Q
    |||||||||||||||||||||||||||||  | ||| ||||| ||||||| |||||||||||||| ||||||||||||| |||||||| |||| ||||||    
T  22281938 gggtcttacttaagacccccacttttaagtggcacccgcactcttttaatgttaaaaaattgaaatataatgatataaagttattgatggttgattagtg 22281839  T
Q  623 gatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaatt 698  Q
     ||| ||||||||||||||||| | ||||    ||||||||||| ||||||||||||||||| |||||||||||||    
T  22281838 aatcccatttaagaactttgtgggagatcaaggttggagtgattgagtgcttattaggtactactattaaaaaatt 22281763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 561 - 696
Target Start/End: Complemental strand, 32977506 - 32977370
Alignment:
Q  561 gcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattgg 659  Q
    ||||| ||||||| ||||||||||||||  || || |||||| ||||||||||||| ||||||| || ||||||||||||||||||| ||||||  ||||    
T  32977506 gcactcttttaatgttaaaaaattgaaatgtagtggtataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagatctgggttgg 32977407  T
Q  660 agtgatttagtgcttattaggtactgctattaaaaaa 696  Q
    || |||| ||||||||||||||||| |||||||||||    
T  32977406 agggattgagtgcttattaggtactactattaaaaaa 32977370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 598 - 743
Target Start/End: Original strand, 33755768 - 33755917
Alignment:
Q  598 taaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaat 697  Q
    |||| ||||||||||||| ||||||||| ||||||||||| |||||||| ||| ||  ||||||||||| | | ||||||||||||| ||||||||||||    
T  33755768 taaagttattgatagttgattagtggatttcatttaagaattttgtgtgagatttgtgttggagtgattgaatacttattaggtactactattaaaaaat 33755867  T
Q  698 tataaataaatgatgttta----tgagacccatttaagaaccaaaaaatg 743  Q
     |||||||| | |||| ||    |||||||||||||||||||||| ||||    
T  33755868 aataaataagtaatgtatacacttgagacccatttaagaaccaaagaatg 33755917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 562 - 713
Target Start/End: Complemental strand, 7694056 - 7693903
Alignment:
Q  562 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtga-tctgaattgg 659  Q
    |||||||||||||||||||||||||||  || |||||| || ||||||||||||| ||||||| |  ||||||| || |||||||| || | ||  ||||    
T  7694056 cacttttttaatattaaaaaattgaaatgtattgatatgaagttattgatagttgattagtgggttccatttaaaaaatttgtgtgagattatgggttgg 7693957  T
Q  660 agtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    || |||| ||| |||||||||||||  || ||||||||||||||| | ||||||    
T  7693956 agggattgagtacttattaggtactattactaaaaaattataaatgagtgatgt 7693903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 474 - 684
Target Start/End: Complemental strand, 21941153 - 21940941
Alignment:
Q  474 tattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacc-gcacttttttaa 572  Q
    |||||||||||| || ||| |||||| ||||| || ||||||||||| |     ||||| |||||||| |||  ||||||| ||||| |  || ||||||    
T  21941153 tattaggtacctccattggtgagaatttttttcagggtcttataagattccaaatcttatttaagacctccaactttaagcgggacccgtgctcttttaa 21941054  T
Q  573 tattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtg 671  Q
    |||||||||||||||| ||| | | ||||| ||||||||||||  |||||||  | |||||||||  |||||||| ||| ||  |||||| |||| ||||    
T  21941053 tattaaaaaattgaaatatagtaacataaagttattgatagtttattagtgggacccatttaagacttttgtgtgagatatgggttggagggattgagtg 21940954  T
Q  672 cttattaggtact 684  Q
     ||||||||||||    
T  21940953 tttattaggtact 21940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 441 - 560
Target Start/End: Complemental strand, 31103660 - 31103542
Alignment:
Q  441 tggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagac 540  Q
    |||| |||||||||| ||||||||| || || ||||||||||| || | |||||||||||||||| | ||||||||||||   | | |||||||||| ||    
T  31103660 tggaagggtcttaaccatttaagacccgttatctattaggtacttt-attggagagaatcttttttaaagtcttataagatccgtgatcttacttaacac 31103562  T
Q  541 ccccacttttaagcaggacc 560  Q
    | |||||||||||| |||||    
T  31103561 ctccacttttaagcgggacc 31103542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 565 - 646
Target Start/End: Original strand, 387718 - 387801
Alignment:
Q  565 ttttttaatattaaaaaattgaaaata--atgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 646  Q
    ||||| |||||||||||||| ||||||  || ||||||| ||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  387718 tttttaaatattaaaaaattaaaaatataataatataaagttattgatagttgattagtgggtcttatttaagaaatttgtgtg 387801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 562 - 621
Target Start/End: Original strand, 25099068 - 25099128
Alignment:
Q  562 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagt 621  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  25099068 cacttgtttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagt 25099128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 562 - 634
Target Start/End: Original strand, 6988167 - 6988240
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaa 634  Q
    |||| |||||||||||||||||| |||  | |||||||||||||||||||||||||||||| | | ||||||||    
T  6988167 cactcttttaatattaaaaaattaaaatgtgatgatataaaattattgatagttgtttagtaggtttcatttaa 6988240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 569 - 623
Target Start/End: Complemental strand, 31103498 - 31103444
Alignment:
Q  569 ttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtgg 623  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||  |||||||    
T  31103498 ttaatattaaaaaattgatattaatgatataaaattatttatagttaattagtgg 31103444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 448 - 573
Target Start/End: Complemental strand, 7269902 - 7269777
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||| ||||||||  || || |||||||||| ||||| ||| || | | ||||| ||| ||| ||||||   ||||||||| ||||||||||||||    
T  7269902 gtcttaaccatttaagatccgatatctattaggtatcttcattggggaaattttttttcagaatctcataagatccggggtcttatttaagacccccact 7269803  T
Q  548 tttaagcaggaccgcacttttttaat 573  Q
    || |||| ||||| |||  |||||||    
T  7269802 ttaaagcgggaccacacacttttaat 7269777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 565 - 621
Target Start/End: Complemental strand, 18804306 - 18804249
Alignment:
Q  565 ttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagt 621  Q
    |||||||||||||| |||||||||  |||| ||||||||||||||||||||| |||||    
T  18804306 ttttttaatattaataaattgaaatgtaataatataaaattattgatagttgattagt 18804249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 565 - 613
Target Start/End: Complemental strand, 9491885 - 9491836
Alignment:
Q  565 ttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagt 613  Q
    |||||||||||||||||||| |||  |||||||||||| |||||||||||    
T  9491885 ttttttaatattaaaaaattaaaatgtaatgatataaagttattgatagt 9491836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 570 - 612
Target Start/End: Complemental strand, 32730592 - 32730548
Alignment:
Q  570 taatattaaaaaattgaaaa--taatgatataaaattattgatag 612  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||    
T  32730592 taatattaaaaaattgaaaaattaatgatatagaattattgatag 32730548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 2e-55; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 437 - 713
Target Start/End: Complemental strand, 46006336 - 46006059
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||  |||||||||||||||||||| | ||| ||||||||||||  ||| || |||||||||||| |  |||||||||||    ||||||||||||    
T  46006336 ccattgggagggtcttaactatttaagaccccgtaactattaggtacccccaacggggagaatcttttttatggtcttataagagcctgggtcttactta 46006237  T
Q  537 agacccccacttttaagcaggacc-gcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaa 634  Q
    |||| |||||||||||||  |||| ||||| |||||||||||||||||| ||| ||||||||||||| ||||||||||||| ||| ||| ||  ||||||    
T  46006236 agacgcccacttttaagcgtgacctgcactcttttaatattaaaaaattaaaatataatgatataaagttattgatagttgattactgggtcaaatttaa 46006137  T
Q  635 gaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||||||  ||||||  ||||||||||| | || |||||||||||| ||||||||||||||||||| | ||||||    
T  46006136 gaactttgtgtaagatctgggttggagtgattgaatg-ttattaggtactactattaaaaaattataaatgagtgatgt 46006059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 449 - 601
Target Start/End: Original strand, 35539439 - 35539594
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaaga-cccccact 547  Q
    ||||||| ||||||||| ||||| ||||||||||||| ||||| ||||||||||||| || ||||||||||||  |  ||||||||||||| |||||| |    
T  35539439 tcttaaccatttaagacccggtatctattaggtacctccaatgtagagaatctttttcagggtcttataagacccgatgtcttacttaagaccccccaat 35539538  T
Q  548 tttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaa 601  Q
    ||||||  ||| ||||||||||||||||||||||| |||||| |||||||||||||    
T  35539539 tttaagtgggacccgcacttttttaatattaaaaagttgaaatataatgatataaa 35539594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 588 - 735
Target Start/End: Original strand, 35539608 - 35539759
Alignment:
Q  588 aataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgct 687  Q
    ||||| |||||||| ||||||||||||| ||| ||| || ||||||||||||||||||| |||||   ||||||||||  |||| |||||||||||| ||    
T  35539608 aataacgatataaagttattgatagttgattaatgggtcccatttaagaactttgtgtgagatcttggttggagtgatcgagtgtttattaggtactact 35539707  T
Q  688 attaaaaaattataaataaatgatgttta----tgagacccatttaagaacc 735  Q
    |||||||||||||||||||||||||| ||    |||||| ||||||||||||    
T  35539708 attaaaaaattataaataaatgatgtgtacacgtgagactcatttaagaacc 35539759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 446 - 646
Target Start/End: Complemental strand, 52995901 - 52995700
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||||||||||||||| ||| ||||||||||   | | ||||||||||||||||  | || |||||| ||| ||| ||| |||||||| || ||    
T  52995901 gggtcttaactatttaagactcagtatctattaggtattcttactggagagaatctttttcggggtattataatactcggg-tctcacttaagatcctca 52995803  T
Q  546 cttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 643  Q
     | |||| | ||| || |||| |||||||||||||||| | ||| ||||||||||||| ||||||||||||| |||||   |||||||||| || |||||    
T  52995802 atcttaaacgggagcctcactcttttaatattaaaaaaattaaagataatgatataaagttattgatagttgattagtatgtctcatttaacaaatttgt 52995703  T
Q  644 gtg 646  Q
    |||    
T  52995702 gtg 52995700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 562 - 642
Target Start/End: Original strand, 54422716 - 54422796
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttg 642  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||    
T  54422716 cacttttttagtattaaaaaattgaatgtaatgatataaaattattgataattgattagtgggtctcatttaagaaatttg 54422796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 560 - 704
Target Start/End: Original strand, 41211973 - 41212118
Alignment:
Q  560 cgcacttttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattg 658  Q
    ||||| |||||||||||||||| |  ||  |||||||||||| ||||||||||||| |||||   |||||||||||||  |||| || |||  |  ||||    
T  41211973 cgcacctttttaatattaaaaattaaaatgtaatgatataaagttattgatagttgattagtatgtctcatttaagaaacttgtatgagatgttcgattg 41212072  T
Q  659 gagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    ||| |||||| ||||||||||||||| |||||| ||||||||||||    
T  41212073 gagggatttactgcttattaggtactactattacaaaattataaat 41212118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 567 - 654
Target Start/End: Complemental strand, 36902451 - 36902363
Alignment:
Q  567 ttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctga 654  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||| || ||||||||||| ||||| || |||||||    
T  36902451 ttttaatattaaaaaattaaaatataatgatataaagttattgatagttgattagtgaatttcatttaagaaatttgtttgagatctga 36902363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 510 - 731
Target Start/End: Original strand, 46048821 - 46049050
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggaccgca-cttttttaatattaaaaaattgaaaa-taatgatataaaattatt 607  Q
    ||||||||||||| ||||||| ||||||||||| || | |||||  |||||  | | ||| ||||||||||||||||  |  ||||| |||||| |||||    
T  46048821 gtcttataagactcggggtctcacttaagaccctcaatcttaagtgggacccaaacctttgtaatattaaaaaattgttatgtaatggtataaagttatt 46048920  T
Q  608 gatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctatt-aaaaaattataaata 705  Q
    |||||||| || |||  |  ||||||||||||||||||| ||| |||| |||||| ||||   | |||||||||||||  |||| ||||||||||||||     
T  46048921 gatagttgatttgtgagttccatttaagaactttgtgtgagatgctgagttggagggattggatacttattaggtactaatattaaaaaaattataaatg 46049020  T
Q  706 aatgatgttta----tgagacccatttaag 731  Q
    | | |||||||    |||||||||||||||    
T  46049021 agtaatgtttacatgtgagacccatttaag 46049050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 562 - 624
Target Start/End: Complemental strand, 19900264 - 19900201
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtgga 624  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||| ||||||| ||||||||    
T  19900264 cacttttttaatattaaaaaattaaaatgtaatgatataaaattatttatagttgattagtgga 19900201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 541 - 634
Target Start/End: Complemental strand, 30595236 - 30595141
Alignment:
Q  541 ccccacttttaagcaggaccg-cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaa 634  Q
    |||||||||||||| |||||  || | ||||| |||||||||||| |||  |||||||||||||||||||||||||| ||||||  ||||||||||    
T  30595236 ccccacttttaagcgggaccttcattcttttagtattaaaaaatttaaatgtaatgatataaaattattgatagttgattagtgagtctcatttaa 30595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 510 - 615
Target Start/End: Original strand, 55272746 - 55272853
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggac-cgcacttttttaatattaaaaaattgaaa-ataatgatataaaattatt 607  Q
    ||||||||||||  | | || ||||||||||| ||| |||||||| | |  |||||  |||||||||||||||||||||| ||||||||||||| |||||    
T  55272746 gtcttataagacccgagttcctacttaagacctccatttttaagcggaattcgcacacttttaatattaaaaaattgaaatataatgatataaagttatt 55272845  T
Q  608 gatagttg 615  Q
    ||||||||    
T  55272846 gatagttg 55272853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 559 - 636
Target Start/End: Complemental strand, 47075683 - 47075605
Alignment:
Q  559 ccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaaga 636  Q
    |||||| ||||||||||||||||||||| |  ||||||||||||||||| |||||||| ||||||  |||| |||||||    
T  47075683 ccgcacatttttaatattaaaaaattgatatgtaatgatataaaattatagatagttgattagtgagtctcgtttaaga 47075605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 566 - 646
Target Start/End: Complemental strand, 33832069 - 33831988
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 646  Q
    ||||||||||||||||||| ||   ||||||||| |||||||||||||||| |||||||||  |||| ||||| ||||||||    
T  33832069 tttttaatattaaaaaattaaattgtaatgatatgaaattattgatagttgattagtggattccattaaagaaatttgtgtg 33831988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 560 - 704
Target Start/End: Complemental strand, 36277900 - 36277750
Alignment:
Q  560 cgcacttttttaatattaaaaaattgaa----aataatgatataaaattattgatagttgtttagtggatctcattt-aagaactttgtgtgtgat-ctg 653  Q
    |||||| |||||||||||||||||||||    |||||||||||||| ||||||||| ||  ||||||| | | |||| || || |||||||| ||| |||    
T  36277900 cgcactcttttaatattaaaaaattgaaatgtaataatgatataaagttattgatattttattagtgggtttaatttaaaaaaatttgtgtgagatgctg 36277801  T
Q  654 aattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    | ||||||  ||| | | |||||||| || | |||||||||||||||||||    
T  36277800 agttggaggaattgaatacttattagatattactattaaaaaattataaat 36277750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 565 - 646
Target Start/End: Original strand, 26085061 - 26085143
Alignment:
Q  565 ttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 646  Q
    |||||||||||||||||||||||| |||||| |||||| |||||||| |||| | ||||  || |||||||||| ||| ||||    
T  26085061 ttttttaatattaaaaaattgaaatataatggtataaagttattgatggttgataagtgtgtcccatttaagaaatttatgtg 26085143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 593 - 713
Target Start/End: Complemental strand, 13755251 - 13755133
Alignment:
Q  593 tgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaa 692  Q
    ||||||||| ||||||||||||| ||  ||| || |||||||||| |||||||| |  | |  || ||| |||| ||| ||||||| ||||| |||||||    
T  13755251 tgatataaagttattgatagttgatttttgggtcccatttaagaaatttgtgtgag--cagggttagagggattgagttcttattaagtactactattaa 13755154  T
Q  693 aaaattataaataaatgatgt 713  Q
    |||||||||||| | ||||||    
T  13755153 aaaattataaatgagtgatgt 13755133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 655 - 716
Target Start/End: Complemental strand, 40485130 - 40485069
Alignment:
Q  655 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta 716  Q
    ||||||||| || | |||||||||||||||  |||||||||||||||||  |||||||||||    
T  40485130 attggagtggttgaatgcttattaggtactattattaaaaaattataaaagaatgatgttta 40485069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 668 - 711
Target Start/End: Complemental strand, 40242210 - 40242167
Alignment:
Q  668 agtgcttattaggtactgctattaaaaaattataaataaatgat 711  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||    
T  40242210 agtgcttattaggtattactattaaaaaattataaataagtgat 40242167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 659 - 713
Target Start/End: Complemental strand, 29950820 - 29950766
Alignment:
Q  659 gagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||| |||||||||||| |||| ||||||||||| ||||||| | ||||||    
T  29950820 gagtgattgagtgcttattagatactactattaaaaaaatataaatgagtgatgt 29950766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 659 - 713
Target Start/End: Complemental strand, 29999974 - 29999920
Alignment:
Q  659 gagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||| |||||||||||| |||| ||||||||||| ||||||| | ||||||    
T  29999974 gagtgattgagtgcttattagatactactattaaaaaaatataaatgagtgatgt 29999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 562 - 611
Target Start/End: Original strand, 41211726 - 41211776
Alignment:
Q  562 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgata 611  Q
    |||||||||||||||||||||||||||  |||||||||||| ||| |||||    
T  41211726 cacttttttaatattaaaaaattgaaacgtaatgatataaagttaatgata 41211776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 659 - 713
Target Start/End: Original strand, 52393731 - 52393785
Alignment:
Q  659 gagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||| | || ||||||| || || |||||||||||||||||||||||||||    
T  52393731 gagtgattgaatgtttattagatattgttattaaaaaattataaataaatgatgt 52393785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 3e-54; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 449 - 704
Target Start/End: Complemental strand, 43302366 - 43302108
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccc--ac 546  Q
    |||||||||||||||||   ||| ||||||||||||| ||| || |||||  ||||| |  ||||||||||||  |||||||||||||||||||||  ||    
T  43302366 tcttaactatttaagacctagtaactattaggtacctccaaggg-gagaacttttttcaaggtcttataagacctggggtcttacttaagacccccctac 43302268  T
Q  547 ttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtg 644  Q
    |||||||| ||| || |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| || |||||||||| | ||||    
T  43302267 ttttaagcgggatccacactcttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtgggtcccatttaagaattatgtg 43302168  T
Q  645 tgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    || |||||  |||||||||||| |||  |||||||||||| |||||||||||||||||||    
T  43302167 tgagatctagattggagtgattgagtatttattaggtactactattaaaaaattataaat 43302108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 495 - 748
Target Start/End: Complemental strand, 36658089 - 36657830
Alignment:
Q  495 agaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacc-gcacttttttaatattaaaaaattgaaa-ataa 592  Q
    ||||| ||||| || |||||||  |||| ||||||||||||||||||||||||||||| | | ||| ||||| |||||||||||||| ||| ||| ||||    
T  36658089 agaatttttttcagggtcttatgggactcggggtcttacttaagacccccacttttaaccggaacccgcactattttaatattaaaatattaaaatataa 36657990  T
Q  593 tgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaa 692  Q
    || |||||||||||||||||||| ||||||| || ||||||||||||||||||| ||||||  ||||||||||| |||||||||||| || | |||||||    
T  36657989 tggtataaaattattgatagttgattagtgggtcccatttaagaactttgtgtgagatctgggttggagtgattgagtgcttattagatagtactattaa 36657890  T
Q  693 aaaattataaataaatgatgttt----atgagacccatttaagaaccaaaaaatgagtgt 748  Q
    |||||||||||| |   |||| |    |||||||||||||||||||| ||||||| ||||    
T  36657889 aaaattataaatgagcaatgtgtacacatgagacccatttaagaacccaaaaatgggtgt 36657830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 470 - 699
Target Start/End: Complemental strand, 36482231 - 36482001
Alignment:
Q  470 tacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggac-cgcactttt 568  Q
    ||||||||||||||| | |||||||| ||||||||| ||  |||||||| |   ||||||||||||||||||||||||||||||| |||  |||||| ||    
T  36482231 tacctattaggtaccct-aatggagataatcttttttaggatcttataaaatctggggtcttacttaagacccccacttttaagcgggaatcgcactctt 36482133  T
Q  569 ttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgattt 667  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||| |||||| |||||||||||||||||||||||  |||||  || ||||||||     
T  36482132 ttaatattaaaaaattgaaatataattatataaagttattgatagttgattagtgaatctcatttaagaactttgtgtgatatctgggttagagtgattg 36482033  T
Q  668 agtgcttattaggtactgctattaaaaaatta 699  Q
    |||||||||||  |||| ||||||||| ||||    
T  36482032 agtgcttattaaatactactattaaaatatta 36482001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 494 - 713
Target Start/End: Complemental strand, 23156442 - 23156221
Alignment:
Q  494 gagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacc-gcacttttttaatattaaaaaattgaaaa-ta 591  Q
    ||||||| |||| || || ||||||||  | | ||||||| ||||||||||| ||||| || ||||| ||||| |||||||||||||||||| |||  ||    
T  23156442 gagaatcgttttcagggttttataagatcatgagtcttacctaagacccccaattttatgcgggacctgcactcttttaatattaaaaaattaaaatgta 23156343  T
Q  592 atgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctatta 691  Q
     ||||||||| ||||||||||||| ||| ||| |||||||||||||||||||||| |||||   |||||| |||| |||||||||||| |||| ||||||    
T  23156342 gtgatataaagttattgatagttgattaatgggtctcatttaagaactttgtgtgagatctaggttggagggattaagtgcttattagctactactatta 23156243  T
Q  692 aaaaattataaataaatgatgt 713  Q
     |||| |||||||  |||||||    
T  23156242 taaaactataaattgatgatgt 23156221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 448 - 646
Target Start/End: Original strand, 39853645 - 39853845
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||| |||| |||  ||||||||||||||||| |||| |||  ||||||||||| |  ||||||||||||| ||||||||| |||||||||| |||    
T  39853645 gtcttaaccatttgagatccggtacctattaggtactttcattgggaagaatctttttcaaggtcttataagactcggggtcttatttaagacccctact 39853744  T
Q  548 tttaagcaggac-cgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 645  Q
    ||||||| || |   |  | ||| |||||||||||||||||| |||||| |||||| ||||||||||||| ||||||| || |||||||||| ||| |||    
T  39853745 tttaagcggggcattcgttatttcaatattaaaaaattgaaatataatggtataaagttattgatagttgattagtgggtcccatttaagaaatttttgt 39853844  T
Q  646 g 646  Q
    |    
T  39853845 g 39853845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 510 - 735
Target Start/End: Original strand, 44441529 - 44441761
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcagg-accgcacttttttaatattaaaaaattgaa-aataatgatataaaattatt 607  Q
    ||||||||||||  ||||||||| ||||||||||||||||||| | ||  || |||| |||||||||||||||||||||   |||||||||  | || ||    
T  44441529 gtcttataagacctggggtcttatttaagacccccacttttaatcgggtccctcactcttttaatattaaaaaattgaagtgtaatgatatccagttgtt 44441628  T
Q  608 gatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataa 706  Q
    |||||||| ||||||| ||||||||||||| ||| |||| ||| |||  ||||||  ||| ||| ||||||||||||| |  |||||||||||||||| |    
T  44441629 gatagttgattagtgggtctcatttaagaaatttttgtgagatgctgggttggagatattgagttcttattaggtactaccgttaaaaaattataaatga 44441728  T
Q  707 atgatgttta----tgagacccatttaagaacc 735  Q
     |||||| ||    |||||||||||||||||||    
T  44441729 gtgatgtgtacatttgagacccatttaagaacc 44441761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 448 - 646
Target Start/End: Complemental strand, 36901285 - 36901085
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||| ||||||||||  |||||| |||||||||| ||  || || ||||||||| || |||||||||||    | |||||| |||||||| |||||    
T  36901285 gtcttaaccatttaagacttcgtaccttttaggtacctccatcggggataatctttttcagggtcttataagatccagagtcttatttaagacctccact 36901186  T
Q  548 tttaagcaggaccgcactt-ttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 645  Q
    ||||||| || ||    || |||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| | ||||||||||||| ||| |||    
T  36901185 tttaagctgggcccttattcttttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagtaggtctcatttaagaaatttttgt 36901086  T
Q  646 g 646  Q
    |    
T  36901085 g 36901085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 565 - 713
Target Start/End: Complemental strand, 46282260 - 46282111
Alignment:
Q  565 ttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagt 662  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||  || ||| |||  ||||||     
T  46282260 ttttttaatattcaaaaattaaaacataatgatataaaattattgatagttgattagtgggtctcatttaagaaatttgaatgagatgctg-gttggagg 46282162  T
Q  663 gatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    ||| ||||| ||||||||||  |||||||||||||||||||| || |||||    
T  46282161 gatctagtgtttattaggtatcgctattaaaaaattataaattaacgatgt 46282111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 567 - 713
Target Start/End: Original strand, 31330390 - 31330538
Alignment:
Q  567 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtga 664  Q
    ||||||||||||||||||||||  |||||||||| | ||||||||||||| |||||   ||||||||||||| ||||||||  ||  ||  |||||| ||    
T  31330390 ttttaatattaaaaaattgaaatgtaatgatatatacttattgatagttgattagtacgtctcatttaagaaatttgtgtgaaatgttgggttggaggga 31330489  T
Q  665 tttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    || ||||||||||||||||| | ||||||||||||||||| | ||||||    
T  31330490 ttgagtgcttattaggtactaccattaaaaaattataaatgagtgatgt 31330538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 566 - 742
Target Start/End: Complemental strand, 36656737 - 36656556
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtga 664  Q
    ||||||||||||||||||||| |  |||||||||||| ||||| ||||||| ||  ||| ||||||||||||||||||| || |||   |||||||| ||    
T  36656737 tttttaatattaaaaaattgatatgtaatgatataaagttattaatagttgatttatgggtctcatttaagaactttgtatgagatactaattggaggga 36656638  T
Q  665 tttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaat 742  Q
    || |||  ||||||| |||  ||||||||||||||||||| | |||| | ||    ||||||||||||||| ||||||||||    
T  36656637 ttgagtatttattagataccactattaaaaaattataaatgagtgatatatataagtgagacccatttaagtaccaaaaaat 36656556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 559 - 696
Target Start/End: Original strand, 6068085 - 6068223
Alignment:
Q  559 ccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaatt 657  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||| ||||||||| | |||||| || ||||| || ||||| | ||    
T  6068085 ccgcacttttttaatattaaaaaattgaaatgtaatgatagaaaattattggtagttgattagtggattttatttaaaaaatttgtatgagatcttagtt 6068184  T
Q  658 ggagtgatttagtgcttattaggtactgctattaaaaaa 696  Q
    | ||  ||| ||| |||||||| |||| |||||||||||    
T  6068185 gaaggaattaagtacttattagatactactattaaaaaa 6068223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 562 - 716
Target Start/End: Original strand, 37698479 - 37698632
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattgga 660  Q
    |||| |||||||||||||||||| |||  || ||||||||| || |||||||||  ||||||| | ||||||||||| |||||||| ||| ||  |||||    
T  37698479 cactcttttaatattaaaaaattaaaatgtagtgatataaagttgttgatagtttattagtgggtttcatttaagaattttgtgtgagatttgggttgga 37698578  T
Q  661 gtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta 716  Q
    | |||| ||||||||||||||||| |||||  || ||||||||| | |||||||||    
T  37698579 gggattgagtgcttattaggtactactatt--aacattataaattagtgatgttta 37698632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 449 - 743
Target Start/End: Complemental strand, 46748271 - 46747979
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccactt 548  Q
    ||||||| |||||||||  |||| |||||||||||   || ||| ||||||||| || || |   ||||||||| | ||||||| |||||||||||||||    
T  46748271 tcttaaccatttaagacctggtatctattaggtactcccattggggagaatcttcttcaggg---tataagactcgaggtcttagttaagacccccactt 46748175  T
Q  549 ttaagcagga-ccgcacttttttaatattaaaaaattga-aaataatgatataaaattattgatagttgtttagtggatctcattt--aagaactttgtg 644  Q
    |||||| ||| || |||| ||||||||||||| |||||| |  |||||||||||| ||||||| ||||| |||| || || |||||  || ||  |||||    
T  46748174 ttaagcgggacccacactcttttaatattaaataattgatatgtaatgatataaagttattgacagttgattagggggtcccattttaaaaaaaattgtg 46748075  T
Q  645 tgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaa 740  Q
            ||||| ||| |||| ||| |||||||||| || ||||||||||||||||||||| |||||| ||    || ||||||||||| |||| ||||    
T  46748074 -------agaatttgagggattgagttcttattaggtgctactattaaaaaattataaataagtgatgtgtataagtgggacccatttaaaaacccaaaa 46747982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 563 - 698
Target Start/End: Original strand, 2008581 - 2008718
Alignment:
Q  563 acttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggag 661  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||||||||| |||  || |  |||||||||| |||||||| ||||||  || |||    
T  2008581 acttttttaatattaaaaaattgaaatgtaatggtataaaattattgatagttgattaacgggttccatttaagaaatttgtgtgagatctgggttagag 2008680  T
Q  662 tgatttagtgc-ttattaggtactgctattaaaaaatt 698  Q
     |||| ||| | |||||| ||||| ||| |||||||||    
T  2008681 ggattgagtactttattaagtactactactaaaaaatt 2008718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 570 - 712
Target Start/End: Complemental strand, 29914528 - 29914383
Alignment:
Q  570 taatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaa-ttggagtgattt 667  Q
    |||||||||||||||||||  |||| ||||||| ||||||||||||| |||| |  || |||||| ||| |||||||| ||| | || |||||| ||||     
T  29914528 taatattaaaaaattgaaatgtaataatataaagttattgatagttgattagcgagtcccatttatgaaatttgtgtgagatgttaagttggagggatta 29914429  T
Q  668 agtgcttattaggtactgctatta-aaaaattataaataaatgatg 712  Q
    |||| |||||||||| | |||||| ||||||||||||||| |||||    
T  29914428 agtgtttattaggtattactattataaaaattataaataagtgatg 29914383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 562 - 637
Target Start/End: Complemental strand, 48767290 - 48767214
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaat-aatgatataaaattattgatagttgtttagtggatctcatttaagaa 637  Q
    ||||||||||||| |||||||||||||   ||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  48767290 cacttttttaataataaaaaattgaaatgcaatgatataaagttattgatagttgattagtgggtctcatttaagaa 48767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 566 - 713
Target Start/End: Original strand, 4958233 - 4958385
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat----ctgaattgga 660  Q
    ||||||||||||||||||||| |  |||||||||||| || |||||||||| || |||| | |||||||||||  ||||||| |||     |   |||||    
T  4958233 tttttaatattaaaaaattgatatgtaatgatataaagttgttgatagttgatttgtgggtttcatttaagaaagttgtgtgagatgttgttcggttgga 4958332  T
Q  661 gtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    | |||| |||| ||||||| |||| ||||||||||||||||||| ||||||||    
T  4958333 gggattgagtgtttattagatactactattaaaaaattataaatgaatgatgt 4958385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 566 - 713
Target Start/End: Original strand, 19987154 - 19987303
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtg 663  Q
    ||||||||||||||||||||  |  ||||||| |||| ||||||||||| | || || | || ||||||||||||||||||| |||  ||  |||||| |    
T  19987154 tttttaatattaaaaaattgttatgtaatgatttaaagttattgatagtcgatttgtaggtcccatttaagaactttgtgtgagatgttgggttggaggg 19987253  T
Q  664 atttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    ||   || ||||||| ||||| ||||||||||||||||||| ||||||||    
T  19987254 atcatgtacttattatgtactactattaaaaaattataaatgaatgatgt 19987303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 566 - 645
Target Start/End: Complemental strand, 25307612 - 25307532
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 645  Q
    ||||||||||||||||||||| |  |||||||||||  |||||||| |||| || |||||||||||||||||| |||||||    
T  25307612 tttttaatattaaaaaattgagatgtaatgatataagtttattgattgttgatttgtggatctcatttaagaaatttgtgt 25307532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 566 - 704
Target Start/End: Complemental strand, 47841551 - 47841411
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtg 663  Q
    ||||||||||||||||||||| |  | ||| |||||| ||||||||||||| || |||  ||||||||||||||||| |||| ||| ||   |||||| |    
T  47841551 tttttaatattaaaaaattgatatgtgatggtataaagttattgatagttgatttgtgagtctcatttaagaactttatgtgagatgcttggttggaggg 47841452  T
Q  664 atttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    ||| ||| |||||||  |||| |||||| ||||||||||||    
T  47841451 attgagtacttattaaatactactattacaaaattataaat 47841411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 446 - 713
Target Start/End: Original strand, 38223849 - 38224121
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||||||||||||   |||||||| | ||||| |||| ||  || ||  |||||| | ||||||||||||   | |||| ||||||||| | ||    
T  38223849 gggtcttaactatttaagatctggtacctaattggtactttcattgtggacaaaatttttgggggtcttataagacccagagtctcacttaagactctca 38223948  T
Q  546 cttttaagcaggaccg-cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcattt--aagaacttt 641  Q
     | |||||  |||||  ||| ||||||||||||||||||| | |  |||||||||||  ||||||||||||| ||  ||  ||||||||  |||||||||    
T  38223949 atcttaagtgggacccacacctttttaatattaaaaaatttatatgtaatgatataatgttattgatagttgatttttgagtctcatttttaagaacttt 38224048  T
Q  642 gtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    || || ||| |||  ||| || |||| ||| ||||||||||||| | || |||||||| ||||||||| ||||    
T  38224049 gtttgagatactgggttgaagggattgagtacttattaggtactaccatcaaaaaattctaaataaatcatgt 38224121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 501 - 713
Target Start/End: Complemental strand, 5514041 - 5513826
Alignment:
Q  501 tttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggac-cgcacttttttaatattaaaaaattgaaaa-taatgatat 598  Q
    ||||| ||| |||||||||||| ||| ||| |||||||||||| | | ||||||  ||| | |||| ||||||||| ||||||||||||  |||| ||||    
T  5514041 tttttcagaatcttataagactcgggatctcacttaagaccccaa-tcttaagcgagacacacactcttttaatataaaaaaattgaaatgtaattatat 5513943  T
Q  599 aaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaa- 696  Q
    ||| |||||||| || | ||||||  |||||||||| || |||| ||| ||| | |  |||||| |||| ||  |||||||| || | |||||||||||     
T  5513942 aaagttattgatggtcgattagtgagtctcatttaaaaaatttgcgtgagatacggggttggagggattgagaacttattagatattactattaaaaaaa 5513843  T
Q  697 ttataaataaatgatgt 713  Q
    |||||||||| ||||||    
T  5513842 ttataaataagtgatgt 5513826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 473 - 622
Target Start/End: Complemental strand, 25324723 - 25324573
Alignment:
Q  473 ctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggaccg-cactttttta 571  Q
    |||||| ||||||| | ||  ||||| ||||||  ||||||||| |||  |||||||| |||||||||| ||| | |||||   ||||  |||||||| |    
T  25324723 ctattaagtacctttattgaggagaaactttttcggagtcttatgagatcaggggtctcacttaagaccaccaatcttaagtgagacccacacttttt-a 25324625  T
Q  572 atattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtg 622  Q
    ||||||||||||||  | |||||||||||||||||||||||| || ||||||    
T  25324624 atattaaaaaattgttatataatgatataaaattattgatagctgattagtg 25324573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 634
Target Start/End: Complemental strand, 44441449 - 44441347
Alignment:
Q  534 ttaagacccccacttttaagcaggac-cgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatt 631  Q
    ||||||||||||  ||||| |||| | |||||  |||||||||||||||||| |||  || ||||||||| ||||||||||||| ||||||| || ||||    
T  44441449 ttaagacccccaactttaaacagggcgcgcacgcttttaatattaaaaaattaaaatgtagtgatataaagttattgatagttgattagtgggtcccatt 44441350  T
Q  632 taa 634  Q
    |||    
T  44441349 taa 44441347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 566 - 614
Target Start/End: Original strand, 19594044 - 19594093
Alignment:
Q  566 tttttaatattaaaaaattgaaa-ataatgatataaaattattgatagtt 614  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  19594044 tttttaagattaaaaaattgaaatataatgatataaagttattgatagtt 19594093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 565 - 646
Target Start/End: Original strand, 13057863 - 13057946
Alignment:
Q  565 ttttttaatattaaaaaattgaaaata--atgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 646  Q
    ||||||||||||||||||||  ||||   |||||||||| ||||||||||||| |||||   || |||||||||| ||||||||    
T  13057863 ttttttaatattaaaaaatttgaaatgttatgatataaagttattgatagttgattagtaagtcacatttaagaaatttgtgtg 13057946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 566 - 613
Target Start/End: Complemental strand, 19753090 - 19753042
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagt 613  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  19753090 tttttaagattaaaaaattgaaatgtaatgatataaaattattgatagt 19753042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 566 - 621
Target Start/End: Original strand, 36039050 - 36039106
Alignment:
Q  566 tttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagt 621  Q
    ||||||||||||||||| ||||| ||||||||||||| |||| |||||||| |||||    
T  36039050 tttttaatattaaaaaaatgaaatataatgatataaagttatcgatagttgattagt 36039106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 448 - 479
Target Start/End: Complemental strand, 36658119 - 36658088
Alignment:
Q  448 gtcttaactatttaagactcggtacctattag 479  Q
    ||||||||||||||||||||||||||||||||    
T  36658119 gtcttaactatttaagactcggtacctattag 36658088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 565 - 634
Target Start/End: Original strand, 15018373 - 15018443
Alignment:
Q  565 ttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaa 634  Q
    |||||||||||| ||||||| |||  |||| ||||||| ||||||||| ||| ||||| ||||||||||||    
T  15018373 ttttttaatattcaaaaattaaaatgtaataatataaagttattgataattgattagtagatctcatttaa 15018443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 672 - 743
Target Start/End: Complemental strand, 31322334 - 31322259
Alignment:
Q  672 cttattaggtactgctattaaaaaattataaataaatgatgt----ttatgagacccatttaagaaccaaaaaatg 743  Q
    ||||||||||||| || |||||||||||||||| | ||||||     |||| |||||||||||| |||||||||||    
T  31322334 cttattaggtactactgttaaaaaattataaatgagtgatgtgtacatatgtgacccatttaagtaccaaaaaatg 31322259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 655 - 713
Target Start/End: Original strand, 43788610 - 43788668
Alignment:
Q  655 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||| ||| ||| |||| ||||||||  |||||||||||||||||||| ||||||    
T  43788610 attggagtcattgagtccttaataggtacttttattaaaaaattataaataagtgatgt 43788668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 673 - 706
Target Start/End: Original strand, 27334475 - 27334508
Alignment:
Q  673 ttattaggtactgctattaaaaaattataaataa 706  Q
    |||||||||||| |||||||||||||||||||||    
T  27334475 ttattaggtactactattaaaaaattataaataa 27334508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 631 - 704
Target Start/End: Original strand, 30859633 - 30859706
Alignment:
Q  631 ttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    ||||||| ||| |||| ||||||  ||||||  ||| ||| |||||| |||||| |||||||||||||||||||    
T  30859633 ttaagaaatttttgtgagatctgggttggaggaattgagtacttattgggtactactattaaaaaattataaat 30859706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 3e-48; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 437 - 679
Target Start/End: Original strand, 13486446 - 13486693
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||| | |||||||||||||||||| | |||| |||||||||||| |||||| |||||| ||||| ||  ||||| |||||| | |||||||||||    
T  13486446 ccattggaagagtcttaactatttaagacgcagtacatattaggtacctccaatggggagaatttttttaaggatcttacaagactcgaggtcttactta 13486545  T
Q  537 agacccccacttttaagc----aggaccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatt 631  Q
    |||||||| |||||||||    ||  ||||||| |||||||||||||||||||||| ||||||||||||| |||||||||| || ||||||| |  ||||    
T  13486546 agacccccgcttttaagcggcgagacccgcactattttaatattaaaaaattgaaatataatgatataaagttattgatagctgattagtgggttccatt 13486645  T
Q  632 taagaactttgtgtgtgatctgaattggagtgatttagtgcttattag 679  Q
    ||| ||||||||| | |||||   ||||||||||| ||||||||||||    
T  13486646 taaaaactttgtgagagatctaggttggagtgattgagtgcttattag 13486693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 528 - 711
Target Start/End: Complemental strand, 1309930 - 1309745
Alignment:
Q  528 tcttacttaagacccccacttttaagcagga-ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggat 625  Q
    ||||||||| |||| | ||||||||| |||| ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| ||| |||||| ||    
T  1309930 tcttacttacgacctctacttttaagtaggatccgcactcttttaatattaaaaaattaaaatataatgatataaaattattgataattgattagtgtat 1309831  T
Q  626 ctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgat 711  Q
    |  |||||||||||||||||| ||| || |||||||||||| |||||||||||| ||||  |||||||||||||||||||||||||    
T  1309830 ccaatttaagaactttgtgtgagatttggattggagtgattgagtgcttattagatactattattaaaaaattataaataaatgat 1309745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 559 - 706
Target Start/End: Original strand, 2375536 - 2375684
Alignment:
Q  559 ccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaatt 657  Q
    ||||||| |||||||||||||||||| ||| ||||| ||||||| ||||||||||||| ||||||| || ||||||||||||||||||| ||| |||  |    
T  2375536 ccgcactcttttaatattaaaaaattaaaatataattatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagatttgaggt 2375635  T
Q  658 ggagtgatttagtgcttattaggtactgctattaaaaaattataaataa 706  Q
     |||||||| | || |||||||||||| |||||||||||||||||||||    
T  2375636 tgagtgattgaatgtttattaggtactactattaaaaaattataaataa 2375684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 441 - 666
Target Start/End: Complemental strand, 42951986 - 42951760
Alignment:
Q  441 tggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagac 540  Q
    |||| |||||||||  ||||||||  | ||| |||||||||||||| | ||| | |||| ||||| |   |||||||||| | | | ||||| |||||||    
T  42951986 tggaagggtcttaaacatttaagatccagtatctattaggtacctttattggggtgaatttttttcaagatcttataaga-tcgtgatcttatttaagac 42951888  T
Q  541 ccccacttttaagcagga-ccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaac 638  Q
    ||||| |||||| | ||  |||||  |||||||||||||||||||||||  || ||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  42951887 ccccaattttaaacggggtccgcatatttttaatattaaaaaattgaaatgtagtgatataaaattattgataattgattagtgggtctcatttaagaac 42951788  T
Q  639 tttgtgtgtgatctgaattggagtgatt 666  Q
    |||||||| ||||||| |||||| ||||    
T  42951787 tttgtgtgagatctgagttggagggatt 42951760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 566 - 743
Target Start/End: Complemental strand, 41520991 - 41520808
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtg 663  Q
    ||||||||| ||||||||||| |  ||||| |||||| ||||||||||||  || |||| || |||||| |||||||||||| ||| |||  |||||| |    
T  41520991 tttttaatagtaaaaaattgatatgtaatggtataaagttattgatagttaatttgtgggtcccatttaggaactttgtgtgagatgctgggttggaggg 41520892  T
Q  664 atttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaatg 743  Q
    ||| ||| ||||||||||||  ||||||||||||||||||||| |||||| ||    ||| |||||||||||||||||||||||    
T  41520891 attgagttcttattaggtaccactattaaaaaattataaataagtgatgtgtacacgtgaaacccatttaagaaccaaaaaatg 41520808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 567 - 742
Target Start/End: Complemental strand, 13420836 - 13420656
Alignment:
Q  567 ttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 665  Q
    |||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||  || ||||||| ||||||||||| ||||| | ||||||||||    
T  13420836 ttttaatattaaaaaattgaaatataattatataaagttattgatagttgattagtgagtcccatttaacaactttgtgtgagatctaagttggagtgat 13420737  T
Q  666 ttagtgcttattaggtactgctattaaaaaattataaataaatgatgtttat-----gagacccatttaagaaccaaaaaat 742  Q
      |||| |||||| ||||  ||||| |||||||| |||||| |||||| |||      ||||||||||||||||| ||||||    
T  13420736 cgagtgattattaagtaccactatt-aaaaattacaaataagtgatgtatatacgtgaagacccatttaagaacccaaaaat 13420656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 567 - 748
Target Start/End: Complemental strand, 26675607 - 26675421
Alignment:
Q  567 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 665  Q
    |||||||||||||||||||||   | |||||||||| ||||||||| ||| ||||||| ||| ||||||||| ||| |||| ||||||| |||||  |||    
T  26675607 ttttaatattaaaaaattgaagtgtgatgatataaagttattgatatttgattagtgggtctaatttaagaaatttatgtgagatctgagttggaaggat 26675508  T
Q  666 ttagtgcttattaggtactgctattaaaaaattataaataaatgatgt----ttatgagacccatttaagaaccaaaaaatgagtgt 748  Q
    | ||||||||| || |||| ||||||||||||||||||| | ||||||     ||||||||||||||| | ||| ||||||| ||||    
T  26675507 taagtgcttataagatactactattaaaaaattataaatgagtgatgtgtacatatgagacccatttaggtacccaaaaatgtgtgt 26675421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 567 - 748
Target Start/End: Complemental strand, 26947215 - 26947029
Alignment:
Q  567 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 665  Q
    |||||||||||||||||||||   | |||||||||| ||||||||| ||| ||||||| ||| ||||||||| ||| |||| ||||||| |||||  |||    
T  26947215 ttttaatattaaaaaattgaagtgtgatgatataaagttattgatatttgattagtgggtctaatttaagaaatttatgtgagatctgagttggaaggat 26947116  T
Q  666 ttagtgcttattaggtactgctattaaaaaattataaataaatgatgt----ttatgagacccatttaagaaccaaaaaatgagtgt 748  Q
    | ||||||||| || |||| ||||||||||||||||||| | ||||||     ||||||||||||||| | ||| ||||||| ||||    
T  26947115 taagtgcttataagatactactattaaaaaattataaatgagtgatgtgtacatatgagacccatttaggtacccaaaaatgtgtgt 26947029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 510 - 704
Target Start/End: Complemental strand, 18396703 - 18396508
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggaccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattg 608  Q
    |||||||||||   ||||||||| ||||||||||||  ||||||| || |||||   |||||||||||||||||||||| ||  ||||||||| |||||     
T  18396703 gtcttataagatccggggtcttatttaagacccccaactttaagcggggccgcatgcttttaatattaaaaaattgaaatattgtgatataaagttattt 18396604  T
Q  609 atagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    ||||||| || |||| || |||||||||  |||||||| ||||  | || |||  ||| |||  ||||||||||||  ||||||||||||||||||    
T  18396603 atagttgattggtgggtcccatttaagatttttgtgtgagatccaagttagaggaattgagtatttattaggtactattattaaaaaattataaat 18396508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 569 - 703
Target Start/End: Complemental strand, 35463354 - 35463217
Alignment:
Q  569 ttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatct--gaattggagtgat 665  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||  || || ||||||||||| |||||||| ||| |  |  ||| |  |||    
T  35463354 ttaatattaaaaaattgaaacataatgatataaaattattgatagttgatttatgaatttcatttaagaaatttgtgtgagatgttgggtttgaaaggat 35463255  T
Q  666 ttagtgcttattaggtactgctattaaaaaattataaa 703  Q
    | ||| ||||||||||||| ||||||||||||||||||    
T  35463254 tgagtacttattaggtactactattaaaaaattataaa 35463217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 510 - 643
Target Start/End: Original strand, 12593063 - 12593199
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggaccg-cacttttttaatattaaaaaattgaaaat--aatgatataaaattat 606  Q
    ||||||||||||  || |||| |||||||||||||| |||||||||  |||  |||| |||||||||||||||| | |||||  ||||||||||| ||||    
T  12593063 gtcttataagacccggtgtctcacttaagacccccaattttaagcaaaacccacactcttttaatattaaaaaagttaaaatgtaatgatataaagttat 12593162  T
Q  607 tgatagttgtttagtggatctcatttaagaactttgt 643  Q
    ||||| ||| ||||| | ||||||||||||| |||||    
T  12593163 tgataattgattagttggtctcatttaagaaatttgt 12593199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 562 - 646
Target Start/End: Complemental strand, 15468255 - 15468170
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaat-aatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 646  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||||||  || |||||||||| |||||||||| ||||||||    
T  15468255 cactcttttaatattaaaaaattgaaatttaatgatataaaattattgataaatgattagtggatcccatttaagaaatttgtgtg 15468170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 590 - 713
Target Start/End: Original strand, 29558357 - 29558480
Alignment:
Q  590 taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgcta 688  Q
    |||||||||||||||||||||||||| ||| | ||||| ||||||||| |||||||| ||| |||| ||| || |||| ||||||||||| |||||  ||    
T  29558357 taatgatataaaattattgatagttgattattagatcttatttaagaaatttgtgtgagatgctgagttgaagagattaagtgcttatta-gtactatta 29558455  T
Q  689 ttaaaaaattataaataaatgatgt 713  Q
    |||||||||| ||||| | ||||||    
T  29558456 ttaaaaaattgtaaatgagtgatgt 29558480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 567 - 743
Target Start/End: Original strand, 7293042 - 7293223
Alignment:
Q  567 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 665  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||||||  ||||||  ||  |||||| ||||||||||| ||| ||  | |||| ||     
T  7293042 ttttaatattaaaaaattgaaatgtaatgatataatgttattgatagttaattagtgagtcctatttaaaaactttgtgtgagatttgggtcggagggaa 7293141  T
Q  666 ttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta----tgagacccatttaagaaccaaaaaatg 743  Q
    | | | ||||| ||||| | ||||||||||||||||||| ||||||||  |    || |||||||||||||||| |||||||    
T  7293142 tgaatacttataaggtattactattaaaaaattataaatgaatgatgtgcacgcgtgggacccatttaagaacccaaaaatg 7293223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 566 - 745
Target Start/End: Complemental strand, 837874 - 837691
Alignment:
Q  566 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtg 663  Q
    ||||||||||||||| |||||||  ||||||||||||||||| |||||||  |||||   | ||||||||||| ||| |||| ||| |||  ||| || |    
T  837874 tttttaatattaaaatattgaaatgtaatgatataaaattatagatagtt--ttagtttgtttcatttaagaaatttatgtgagatactgggttgaagag 837777  T
Q  664 atttagtgcttattaggtactgctattaaaaaattataaataaatgatgttta-----tgagacccatttaagaaccaaaaaatgag 745  Q
    ||| |||||||||||| || |||| ||||||| |||||||| | |||||| ||     ||| ||||||||| |||||||||||||||    
T  837776 attgagtgcttattagatattgctgttaaaaatttataaatgagtgatgtatacacgttga-acccatttacgaaccaaaaaatgag 837691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 559 - 632
Target Start/End: Original strand, 8228754 - 8228828
Alignment:
Q  559 ccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcattt 632  Q
    |||||||||| ||||||||||||| |||||  |||||||||| ||||||||||||||| || |||||||| ||||    
T  8228754 ccgcacttttctaatattaaaaaaatgaaatgtaatgatatacaattattgatagttgattcgtggatcttattt 8228828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 449 - 521
Target Start/End: Original strand, 4432229 - 4432300
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagac 521  Q
    ||||||| ||||||||||||||||||||||||||||  |  |||||||||||||||| |  ||||||||||||    
T  4432229 tcttaaccatttaagactcggtacctattaggtacc-ccgttggagagaatctttttaaaggtcttataagac 4432300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 438 - 492
Target Start/End: Original strand, 2375477 - 2375531
Alignment:
Q  438 cattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatgg 492  Q
    ||||||| |||||||||||||| |||| | ||||||||||||||| |||||||||    
T  2375477 cattggaagggtcttaactattcaagaattggtacctattaggtatcttcaatgg 2375531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 655 - 713
Target Start/End: Complemental strand, 4747108 - 4747050
Alignment:
Q  655 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    |||||||||||| |||||||||||| || || |||||||||||||||||| ||| ||||    
T  4747108 attggagtgattgagtgcttattagataatgttattaaaaaattataaatgaattatgt 4747050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 696
Target Start/End: Original strand, 31111753 - 31111890
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaa--taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattg 658  Q
    |||||||||||||||||||||||  |||  | ||||||||||| |||| ||||||| ||| ||  ||| |||||| || |||||||| ||| |||| |||    
T  31111753 cacttttttaatattaaaaaatttgaaatgtgatgatataaaactattaatagttgattaatgattcttatttaaaaaatttgtgtgagatgctgagttg 31111852  T
Q  659 gagtgatttagtgcttattaggtactgctattaaaaaa 696  Q
     ||| ||| | ||| ||||||||| | |||||||||||    
T  31111853 aagtaattgattgcatattaggtattactattaaaaaa 31111890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 566 - 684
Target Start/End: Original strand, 3558767 - 3558887
Alignment:
Q  566 tttttaatattaaaaaattga-aaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtg 663  Q
    ||||||||||||||||||||| |  |||| || |||| ||||||||||||| ||| ||| || |||||| ||| ||||||||  || ||| ||||||| |    
T  3558767 tttttaatattaaaaaattgatatctaataatttaaagttattgatagttgattaatgggtcccatttatgaaatttgtgtgacatgctggattggaggg 3558866  T
Q  664 atttagtgcttattaggtact 684  Q
    ||| ||| |||||||| ||||    
T  3558867 attgagttcttattagatact 3558887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 494 - 542
Target Start/End: Complemental strand, 13420887 - 13420839
Alignment:
Q  494 gagaatctttttgagagtcttataagactaggggtcttacttaagaccc 542  Q
    |||||||||||| ||| |||||||||||| || ||||||||||||||||    
T  13420887 gagaatctttttcagaatcttataagacttggagtcttacttaagaccc 13420839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 565 - 607
Target Start/End: Complemental strand, 35463396 - 35463353
Alignment:
Q  565 ttttttaatattaaaaaattgaaa-ataatgatataaaattatt 607  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  35463396 ttttttgatattaaaaaattgaaacataatgatataaaattatt 35463353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 565 - 615
Target Start/End: Complemental strand, 14642345 - 14642295
Alignment:
Q  565 ttttttaatattaaaaaattgaaaataatgatataaaattattgatagttg 615  Q
    ||||||||||||||||| |  || ||||||||||||| |||||||||||||    
T  14642345 ttttttaatattaaaaattaaaatataatgatataaagttattgatagttg 14642295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 595 - 676
Target Start/End: Complemental strand, 33133346 - 33133264
Alignment:
Q  595 atataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttat 676  Q
    ||||||| ||||||||||||| ||||||  ||| ||||||||| |||||||| ||| |||| || ||| |||| |||||||||    
T  33133346 atataaagttattgatagttgattagtgagtcttatttaagaaatttgtgtgagatgctgagtttgagagattgagtgcttat 33133264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 524 - 644
Target Start/End: Complemental strand, 3054 - 2933
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggaccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtg 622  Q
    ||||||||||||||||||| || | |||||| ||||     |||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||||||    
T  3054 ggggtcttacttaagaccctcaatcttaagcgggactcatatttttttatattaaaaaattgaaatataatgatataaaattattgatagtggattagtg 2955  T
Q  623 gatctcatttaagaactttgtg 644  Q
      ||  ||||||||| ||||||    
T  2954 tgtcctatttaagaaatttgtg 2933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 562 - 713
Target Start/End: Complemental strand, 31934 - 31783
Alignment:
Q  562 cacttttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggag 661  Q
    |||| ||||||||||||||| || || ||||| ||||||| |||||| |||||| ||| |   ||  ||||||||||||||||||  |||||  ||||||    
T  31934 cactcttttaatattaaaaatttaaatataatcatataaagttattgttagttgattacttagtcctatttaagaactttgtgtgaaatctgggttggag 31835  T
Q  662 tgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    | ||| | |||||||| | |||| ||||||| ||||||||||| | ||||||    
T  31834 taattgaatgcttatttgatactactattaagaaattataaatgagtgatgt 31783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 38; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 458 - 586
Target Start/End: Complemental strand, 56011 - 55883
Alignment:
Q  458 tttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcagg 557  Q
    ||||||| ||| ||||||||||||||| ||| ||| ||||| ||||||||| |||||||| |||   |||||| ||||||||||| || | |||||  |     
T  56011 tttaagattcgatacctattaggtaccctcattggggagaaactttttgag-gtcttataggacccagggtctcacttaagaccctcattcttaagtgga 55913  T
Q  558 ac-cgcacttttttaatattaaaaaattga 586  Q
    || | |||| ||||||||||||||||||||    
T  55912 actcacactcttttaatattaaaaaattga 55883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 673 - 713
Target Start/End: Original strand, 59703 - 59743
Alignment:
Q  673 ttattaggtactgctattaaaaaattataaataaatgatgt 713  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  59703 ttattagatattgctattaaaaaattataaataaatgatgt 59743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 566 - 621
Target Start/End: Complemental strand, 6189 - 6133
Alignment:
Q  566 tttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagt 621  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||    
T  6189 tttttaatattaaaaaattgatatataataatataaaattattgatagttgattagt 6133  T

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Target: scaffold0709 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 566 - 621
Target Start/End: Complemental strand, 6207 - 6151
Alignment:
Q  566 tttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagt 621  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||    
T  6207 tttttaatattaaaaaattgatatataataatataaaattattgatagttgattagt 6151  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 567 - 652
Target Start/End: Complemental strand, 2199 - 2114
Alignment:
Q  567 ttttaatattaaaaaattgaaaataa-tgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatct 652  Q
    ||||||||||||||| |||||| | | ||||||||| ||||| ||||||| |||||| |||  |||||||||||||||||| |||||    
T  2199 ttttaatattaaaaa-ttgaaattcagtgatataaagttattaatagttgattagtgaatcctatttaagaactttgtgtgagatct 2114  T

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Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 663 - 704
Target Start/End: Original strand, 63644 - 63685
Alignment:
Q  663 gatttagtgcttattaggtactgctattaaaaaattataaat 704  Q
    |||| ||| ||||||||||||| |||||||||||||||||||    
T  63644 gattgagtccttattaggtactactattaaaaaattataaat 63685  T

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