View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3056-3-Insertion-2 (Length: 1080)

Name: NF3056-3-Insertion-2
Description: NF3056-3
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3056-3-Insertion-2
NF3056-3-Insertion-2
[»] chr4 (38 HSPs)
chr4 (8-1011)||(39628870-39629894)
chr4 (446-707)||(35331971-35332233)
chr4 (446-711)||(35382347-35382613)
chr4 (510-749)||(52199741-52199985)
chr4 (446-749)||(39055039-39055344)
chr4 (437-644)||(43968647-43968854)
chr4 (528-714)||(23359059-23359245)
chr4 (472-705)||(38864970-38865205)
chr4 (515-714)||(2396242-2396442)
chr4 (457-702)||(11346865-11347116)
chr4 (535-714)||(822360-822541)
chr4 (448-714)||(8824842-8825103)
chr4 (441-607)||(5036047-5036213)
chr4 (526-705)||(10180603-10180783)
chr4 (501-601)||(45832497-45832599)
chr4 (526-743)||(35144344-35144564)
chr4 (525-712)||(49210981-49211170)
chr4 (563-647)||(30865882-30865967)
chr4 (449-707)||(23607230-23607490)
chr4 (618-714)||(45833896-45833991)
chr4 (557-712)||(12447403-12447560)
chr4 (591-704)||(22628488-22628602)
chr4 (557-697)||(41915985-41916126)
chr4 (562-705)||(44500483-44500628)
chr4 (568-644)||(54018500-54018577)
chr4 (510-703)||(26698947-26699139)
chr4 (591-646)||(51655147-51655202)
chr4 (571-707)||(35308972-35309110)
chr4 (563-616)||(53779432-53779486)
chr4 (494-547)||(12447359-12447412)
chr4 (494-539)||(28909509-28909554)
chr4 (549-644)||(2574100-2574196)
chr4 (664-710)||(18743264-18743311)
chr4 (656-711)||(51788881-51788936)
chr4 (562-610)||(25424376-25424426)
chr4 (656-714)||(51175607-51175665)
chr4 (525-647)||(40918029-40918153)
chr4 (569-647)||(41963646-41963727)
[»] chr8 (44 HSPs)
chr8 (446-762)||(31226397-31226714)
chr8 (437-714)||(5535774-5536052)
chr8 (448-767)||(18806491-18806815)
chr8 (446-672)||(5978539-5978765)
chr8 (449-667)||(23982122-23982344)
chr8 (448-749)||(6518986-6519290)
chr8 (528-710)||(2603057-2603240)
chr8 (454-704)||(5139667-5139912)
chr8 (525-714)||(14426101-14426291)
chr8 (510-653)||(9134089-9134233)
chr8 (524-714)||(31128537-31128728)
chr8 (446-714)||(37673737-37674011)
chr8 (510-712)||(11777650-11777853)
chr8 (513-714)||(1155117-1155323)
chr8 (457-705)||(28540556-28540806)
chr8 (501-705)||(9604491-9604697)
chr8 (446-714)||(35468207-35468475)
chr8 (563-707)||(35973373-35973519)
chr8 (525-653)||(9133756-9133884)
chr8 (566-712)||(3628223-3628369)
chr8 (541-697)||(16531567-16531724)
chr8 (510-696)||(8673597-8673785)
chr8 (568-703)||(23036790-23036927)
chr8 (524-616)||(28567759-28567852)
chr8 (524-616)||(28575352-28575445)
chr8 (446-712)||(38937666-38937934)
chr8 (567-744)||(13628983-13629166)
chr8 (567-744)||(13729395-13729578)
chr8 (510-714)||(28557184-28557390)
chr8 (513-624)||(10954143-10954255)
chr8 (513-624)||(10962148-10962260)
chr8 (524-616)||(28562261-28562354)
chr8 (556-647)||(6427150-6427242)
chr8 (446-505)||(9133694-9133753)
chr8 (458-647)||(12733931-12734118)
chr8 (497-575)||(5217195-5217273)
chr8 (591-707)||(30714036-30714153)
chr8 (591-707)||(30721813-30721930)
chr8 (590-712)||(7288241-7288364)
chr8 (446-517)||(16531728-16531799)
chr8 (439-517)||(31129615-31129693)
chr8 (656-714)||(43976699-43976757)
chr8 (582-685)||(23812580-23812686)
chr8 (567-616)||(36316757-36316806)
[»] chr1 (39 HSPs)
chr1 (448-739)||(47783605-47783901)
chr1 (446-714)||(32451739-32452008)
chr1 (447-705)||(23333637-23333894)
chr1 (528-705)||(42831601-42831780)
chr1 (525-744)||(43822730-43822953)
chr1 (437-714)||(11120435-11120695)
chr1 (457-743)||(27544257-27544548)
chr1 (448-682)||(40287000-40287232)
chr1 (457-714)||(25813622-25813879)
chr1 (446-624)||(36297858-36298036)
chr1 (451-615)||(38901886-38902051)
chr1 (510-705)||(13983976-13984172)
chr1 (564-714)||(52353769-52353920)
chr1 (446-745)||(36166766-36167069)
chr1 (437-614)||(24555864-24556024)
chr1 (563-714)||(32851740-32851892)
chr1 (532-694)||(44665316-44665480)
chr1 (563-705)||(11241468-11241612)
chr1 (567-705)||(51263185-51263323)
chr1 (660-749)||(38902053-38902146)
chr1 (501-704)||(49003354-49003558)
chr1 (567-744)||(51504479-51504663)
chr1 (494-647)||(11569965-11570114)
chr1 (656-704)||(42401085-42401133)
chr1 (564-646)||(51061670-51061753)
chr1 (655-704)||(37583042-37583091)
chr1 (447-516)||(42831537-42831606)
chr1 (563-622)||(31133165-31133225)
chr1 (656-700)||(31827237-31827281)
chr1 (656-704)||(42483697-42483745)
chr1 (510-705)||(47364269-47364457)
chr1 (563-635)||(3623108-3623176)
chr1 (532-638)||(9505540-9505647)
chr1 (669-704)||(20558608-20558643)
chr1 (525-615)||(43675277-43675368)
chr1 (656-714)||(30627084-30627142)
chr1 (656-714)||(32913943-32914001)
chr1 (674-715)||(23655161-23655202)
chr1 (669-714)||(37073763-37073808)
[»] chr6 (16 HSPs)
chr6 (487-749)||(32658367-32658633)
chr6 (437-714)||(5002349-5002627)
chr6 (525-699)||(22281763-22281938)
chr6 (556-697)||(32977370-32977512)
chr6 (599-744)||(33755768-33755917)
chr6 (474-685)||(21940941-21941153)
chr6 (525-714)||(7693903-7694094)
chr6 (441-571)||(31103531-31103660)
chr6 (467-622)||(25098971-25099128)
chr6 (566-647)||(387718-387801)
chr6 (563-635)||(6988167-6988240)
chr6 (570-624)||(31103444-31103498)
chr6 (566-622)||(18804249-18804306)
chr6 (448-560)||(7269790-7269902)
chr6 (556-614)||(9491836-9491895)
chr6 (571-613)||(32730548-32730592)
[»] chr2 (31 HSPs)
chr2 (437-705)||(6710861-6711131)
chr2 (480-713)||(9583050-9583284)
chr2 (446-705)||(11921818-11922078)
chr2 (473-749)||(14772867-14773147)
chr2 (457-644)||(44887291-44887479)
chr2 (446-646)||(40999552-40999753)
chr2 (448-714)||(26312349-26312614)
chr2 (448-714)||(34374926-34375191)
chr2 (448-714)||(41068777-41069036)
chr2 (451-647)||(36887617-36887814)
chr2 (527-665)||(45135717-45135855)
chr2 (567-704)||(65383-65522)
chr2 (447-615)||(30465136-30465306)
chr2 (556-710)||(32887588-32887742)
chr2 (511-742)||(5038651-5038891)
chr2 (494-635)||(39368657-39368798)
chr2 (566-705)||(3668832-3668973)
chr2 (563-644)||(6459070-6459152)
chr2 (510-705)||(16117901-16118099)
chr2 (567-644)||(34234879-34234957)
chr2 (569-647)||(26297112-26297191)
chr2 (566-623)||(13022796-13022854)
chr2 (447-714)||(37347817-37348087)
chr2 (449-483)||(45135657-45135691)
chr2 (591-694)||(18970016-18970120)
chr2 (659-714)||(4634045-4634100)
chr2 (457-615)||(37648551-37648709)
chr2 (566-618)||(6562936-6562988)
chr2 (527-626)||(16341891-16341992)
chr2 (525-647)||(36266933-36267050)
chr2 (673-714)||(41000006-41000047)
[»] chr7 (35 HSPs)
chr7 (495-749)||(36657830-36658089)
chr7 (449-705)||(43302108-43302366)
chr7 (470-700)||(36482001-36482231)
chr7 (494-714)||(23156221-23156442)
chr7 (448-647)||(36901085-36901285)
chr7 (448-647)||(39853645-39853845)
chr7 (510-736)||(44441529-44441761)
chr7 (566-714)||(46282111-46282260)
chr7 (547-743)||(36656556-36656757)
chr7 (449-714)||(46748013-46748271)
chr7 (558-697)||(6068083-6068223)
chr7 (568-714)||(31330390-31330538)
chr7 (534-693)||(37698451-37698610)
chr7 (511-638)||(48767214-48767342)
chr7 (511-699)||(2008528-2008718)
chr7 (525-714)||(4958191-4958385)
chr7 (571-713)||(29914383-29914528)
chr7 (446-714)||(38223849-38224121)
chr7 (449-714)||(19987037-19987303)
chr7 (473-623)||(25324573-25324723)
chr7 (522-705)||(47841411-47841593)
chr7 (501-714)||(5513826-5514041)
chr7 (567-646)||(25307532-25307612)
chr7 (534-635)||(44441347-44441449)
chr7 (524-615)||(19594001-19594093)
chr7 (524-614)||(19753042-19753133)
chr7 (556-712)||(32724215-32724376)
chr7 (566-647)||(13057863-13057946)
chr7 (567-622)||(36039050-36039106)
chr7 (448-479)||(36658088-36658119)
chr7 (566-635)||(15018373-15018443)
chr7 (656-714)||(43788610-43788668)
chr7 (524-612)||(23802216-23802304)
chr7 (674-707)||(27334475-27334508)
chr7 (632-705)||(30859633-30859706)
[»] chr3 (22 HSPs)
chr3 (437-714)||(46006059-46006336)
chr3 (449-602)||(35539439-35539594)
chr3 (589-714)||(35539608-35539733)
chr3 (446-647)||(52995700-52995901)
chr3 (563-643)||(54422716-54422796)
chr3 (510-705)||(46048821-46049019)
chr3 (561-705)||(41211973-41212118)
chr3 (568-655)||(36902363-36902451)
chr3 (541-635)||(30595141-30595236)
chr3 (510-616)||(55272746-55272853)
chr3 (563-625)||(19900201-19900264)
chr3 (551-705)||(36277750-36277910)
chr3 (560-637)||(47075605-47075683)
chr3 (567-647)||(33831988-33832069)
chr3 (528-647)||(26085023-26085143)
chr3 (594-714)||(13755133-13755251)
chr3 (669-712)||(40242167-40242210)
chr3 (656-715)||(40485071-40485130)
chr3 (660-714)||(29950766-29950820)
chr3 (660-714)||(29999920-29999974)
chr3 (563-612)||(41211726-41211776)
chr3 (660-714)||(52393731-52393785)
[»] chr5 (25 HSPs)
chr5 (437-680)||(13486446-13486693)
chr5 (528-712)||(1309745-1309930)
chr5 (556-744)||(2375532-2375719)
chr5 (441-667)||(42951760-42951986)
chr5 (556-744)||(41520808-41521002)
chr5 (568-714)||(13420690-13420836)
chr5 (568-714)||(26675460-26675607)
chr5 (568-714)||(26947068-26947215)
chr5 (510-644)||(12593063-12593199)
chr5 (570-704)||(35463217-35463354)
chr5 (549-647)||(15468170-15468269)
chr5 (568-744)||(7293042-7293223)
chr5 (510-705)||(18396508-18396703)
chr5 (591-714)||(29558357-29558480)
chr5 (558-633)||(8228752-8228828)
chr5 (567-714)||(837727-837874)
chr5 (449-521)||(4432229-4432300)
chr5 (438-492)||(2375477-2375531)
chr5 (656-714)||(4747050-4747108)
chr5 (563-697)||(31111753-31111890)
chr5 (567-685)||(3558767-3558887)
chr5 (494-542)||(13420839-13420887)
chr5 (566-608)||(35463353-35463396)
chr5 (566-616)||(14642295-14642345)
chr5 (596-677)||(33133264-33133346)
[»] scaffold0991 (1 HSPs)
scaffold0991 (524-645)||(2933-3054)
[»] scaffold0017 (1 HSPs)
scaffold0017 (563-749)||(31744-31934)
[»] scaffold0040 (2 HSPs)
scaffold0040 (458-587)||(55883-56011)
scaffold0040 (674-714)||(59703-59743)
[»] scaffold0712 (1 HSPs)
scaffold0712 (567-622)||(6133-6189)
[»] scaffold0709 (1 HSPs)
scaffold0709 (567-622)||(6151-6207)
[»] scaffold0036 (2 HSPs)
scaffold0036 (535-653)||(2114-2232)
scaffold0036 (664-705)||(63644-63685)


Alignment Details
Target: chr4 (Bit Score: 792; Significance: 0; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 792; E-Value: 0
Query Start/End: Original strand, 8 - 1011
Target Start/End: Complemental strand, 39629894 - 39628870
Alignment:
Q  8 caatgttgatggcagctgcctataggtaatccaatcagagctgaatctgaacgcttactggatcaattatctcgatcttggataaaatgtttttctgact 107  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  39629894 caatgttgatggcagctgcctataggtaacctaatcagagctgaacctgaacgcttaccggatcaattatctcgatcttggataaaaggtttttctgact 39629795  T
Q  108 acgttgtagaaacaattgacattctttttcctaagctacacggga-------------cttttacgggctagagagttaaacttccatgttattatttgg 194  Q
    || ||||||||| ||||||||||||||||||||||||||||||||             ||||||||||||| ||||||||||||||||||||||||||||    
T  39629794 acattgtagaaataattgacattctttttcctaagctacacgggatatccacacgggacttttacgggctacagagttaaacttccatgttattatttgg 39629695  T
Q  195 tacacggattctctccattgtgttcacattttttaagaaccagctttcagatttcacaaatattatacttttgatccggaacatcaaagatcttctcaaa 294  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39629694 tacacggattatctccattgtgttcacattttttaggaaccagctttcagatttcacaaatattatacttttgatccggaacatcaaagatcttctcaaa 39629595  T
Q  295 cttcattggtttgcttccatccaccatttcctatgagaaggaaattgttgtggtgacttataagctaaactttgtgcttcatctacttaaatttatggca 394  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39629594 cttcattggtttgcttccatccaccatttcctatgagaaggaaattgttgtggtgacttataagctaaactttgtgcttcatctacttaaatttatggca 39629495  T
Q  395 catattttttcctacatcacacttattaatctcattcttagaccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggag 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| | ||||||| |    
T  39629494 catattttttcctacatcacacttattaatctcattcttagaccattggatgagtcttaactatttaagattcggtgcctattaggtatcctcaatgggg 39629395  T
Q  495 agaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattg-aaaataa 593  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  39629394 agaatctttttgagagtcttataagactagggatcttacttaagacccccacttttaagcaggactcgcactcttttaatattaaaaaattgaaaaataa 39629295  T
Q  594 tgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaa 693  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||    
T  39629294 tgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgggttggagtgatttagtgcttattagatactactattaa 39629195  T
Q  694 aaaattataaataaatgatgttcatgagacccatttaagaaccaaaaaatgagtgtttcattgtggatggtcttggattcttagccttgtaaaataaaat 793  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  39629194 aaaattataaataaatgatgtgtatgagacccatttaagaaccgaaaaatgagtgtttcattgcggatggtcttgcattcttagccttgtaaaataaaat 39629095  T
Q  794 aaaattatctccacccataaaagtaataatatttgaaaaaccaacccaacaagcatgggccacaaccccacttttcatcacaccaccgccaccaccttca 893  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39629094 aaaattatctccacccataaaagcaataatatttgaaaaaccaacccaacaagcat-ggccacaaccccacttttcatcacaccaccgccaccaccttca 39628996  T
Q  894 gcca-cgcggcgcca-catctacagtagaaacccttgccgtcttaattgacaaatcc-aatc--aaacccaccttctcc-aatccacgcttctctcgttc 987  Q
    |||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||||||    
T  39628995 gccaccgcggcgccaccatttacagtagaaacccttgccgtcttaattgacaaatccaaatccaaaacccaccttctccaaatccacgcttctctcgttc 39628896  T
Q  988 gacgcaac--tgacgaccacactatc 1011  Q
    ||||||||  ||||||||||||||||    
T  39628895 gacgcaaccttgacgaccacactatc 39628870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 446 - 707
Target Start/End: Complemental strand, 35332233 - 35331971
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||||||||||||| ||||||||||||||||||  |||| |||||||||||||| || ||||||||||||| |||||||||||||||||||  |    
T  35332233 gggtcttaactatttaagacccggtacctattaggtacccccaattgagagaatctttttcagggtcttataagacttggggtcttacttaagacccaaa 35332134  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  35332133 cttttaagcaggacacgcactcttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtggatcccatttaagaactttgt 35332034  T
Q  645 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataa 707  Q
    ||| ||||||  ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||    
T  35332033 gtgagatctgggttggagtgattgagtgcttattatgtactactattaaaaaagtataaataa 35331971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 446 - 711
Target Start/End: Complemental strand, 35382613 - 35382347
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||||||||||||| | ||| |||||||| |||   ||||| || ||||||||| || ||||||||||||   |||| ||||||||||||| ||    
T  35382613 gggtcttaactatttaagacccagtaactattaggcacccctaatggggataatctttttcagggtcttataagacccagggttttacttaagaccctca 35382514  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
    ||||||||| |||||| |||| |||||||||| ||||||||||| ||||||||||||| ||| ||||||||| ||||||  |||||||||||||||||||    
T  35382513 cttttaagcgggacccacactcttttaatatttaaaaattgaaatataatgatataaagttagtgatagttgattagtgtgtctcatttaagaactttgt 35382414  T
Q  645 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatga 711  Q
    |||  |||||  ||||||||||| | ||||||||| ||||| ||||||||||||||||||| |||||    
T  35382413 gtgaaatctgggttggagtgattgaatgcttattatgtactactattaaaaaattataaatgaatga 35382347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 510 - 749
Target Start/End: Original strand, 52199741 - 52199985
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattatt 608  Q
    ||||||||||||  |||||||||||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  52199741 gtcttataagacccggggtcttacttaagacccctacttttaagggggacccgcactcttttaatattaaaaaattgaaatataatgatatataattatt 52199840  T
Q  609 gatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaa 708  Q
    |||||| | ||||||| || ||||||||||||||||||| ||||||  ||||||||||| | ||||||||||||||| ||||||||||||||||||| |     
T  52199841 gatagtggattagtgggtcccatttaagaactttgtgtgagatctgggttggagtgattgaatgcttattaggtactactattaaaaaattataaatgag 52199940  T
Q  709 tga--tgttca--tgagacccatttaagaaccaaaaaatgagtgt 749  Q
    |||  ||| ||  || |||||||||||||||| ||||||| ||||    
T  52199941 tgacgtgtgcacgtgggacccatttaagaacccaaaaatgggtgt 52199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 446 - 749
Target Start/End: Original strand, 39055039 - 39055344
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||  |||||| || |||||||||||||||| || || ||| | |||| ||||| |  ||||||||||||| ||||||||| |||||||||| |    
T  39055039 gggtcttaaacatttaaaacccggtacctattaggtatctccattggggtgaattttttttaaggtcttataagactcggggtctta-ttaagaccccaa 39055137  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
    |||| ||| ||| |||||||||||| |||||||||||||| |||  |||||||||||| ||||||||||||| ||||||| | |||||||||||||||||    
T  39055138 cttt-aagtagggcccgcacttttt-aatattaaaaaattaaaatgtaatgatataaagttattgatagttgattagtgggtttcatttaagaactttgt 39055235  T
Q  645 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt----tcatgagacccatttaagaaccaaaa 740  Q
    ||| ||||||| |||||| |||||| | |||||||||||||  |||||||||||||||||| | ||||||     | ||||||||||||||||||| |||    
T  39055236 gtgagatctgagttggagggatttaatacttattaggtactaatattaaaaaattataaatgagtgatgtgtacgcgtgagacccatttaagaacctaaa 39055335  T
Q  741 aatgagtgt 749  Q
    |||| ||||    
T  39055336 aatgggtgt 39055344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 437 - 644
Target Start/End: Original strand, 43968647 - 43968854
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||  |||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||| |  |||||||||||   |||||||||||||    
T  43968647 ccattgggagggtcttaactatttaagacccggaacctattaggtacccccaatggagagaatctttttcacggtcttataagatccggggtcttactta 43968746  T
Q  537 agacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaa 635  Q
    ||| | ||||||||||||||||||| |||| |||||||||||||||||| ||| ||| ||||||||| ||||||||||||| ||||||| ||  ||||||    
T  43968747 aga-ctccacttttaagcaggacccacactcttttaatattaaaaaattaaaatatagtgatataaagttattgatagttgattagtgggtcctatttaa 43968845  T
Q  636 gaactttgt 644  Q
    ||| |||||    
T  43968846 gaattttgt 43968854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 528 - 714
Target Start/End: Original strand, 23359059 - 23359245
Alignment:
Q  528 tcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggat 626  Q
    |||||| ||||||||| | ||||||||  || || |||| |||||||||||||||||||||| || || ||||||| ||||||||||||| || ||||||    
T  23359059 tcttacataagacccc-atttttaagcgagatccacactcttttaatattaaaaaattgaaatattataatataaagttattgatagttgatttgtggat 23359157  T
Q  627 ctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    ||||||||||||||||||||| |||||   ||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||||||    
T  23359158 ctcatttaagaactttgtgtgagatctaggttggagtgattgagtgcttattagatactactattaaaaaattataaatgaatgatgt 23359245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 472 - 705
Target Start/End: Complemental strand, 38865205 - 38864970
Alignment:
Q  472 cctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcactttttt 571  Q
    |||||||||||||| |||||| |||||||||||| || |||||| |||||   ||||||||| |||||| |||||||| ||||| |||||||||| ||||    
T  38865205 cctattaggtacctccaatggggagaatctttttcagggtcttacaagacccagggtcttacgtaagacacccactttgaagcaagacccgcactctttt 38865106  T
Q  572 aatattaa--aaaattgaaa---ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 666  Q
    ||||||||  |||| | |||   |||| ||||||||||| |||||||||| || ||||||| |   ||||||||||||||| ||||||  ||||||||||    
T  38865105 aatattaaaaaaaaataaaaaatataacgatataaaattgttgatagttgattggtggatccc---taagaactttgtgtgagatctgggttggagtgat 38865009  T
Q  667 ttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    | ||||||| ||| ||||| |||||||||||||||||||    
T  38865008 taagtgctttttaagtactactattaaaaaattataaat 38864970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 515 - 714
Target Start/End: Original strand, 2396242 - 2396442
Alignment:
Q  515 ataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatag 613  Q
    |||||||  |||||||||||||||||||| |||||||||  |||||| || ||||||||||||||||| ||||||  || ||||||||| ||||||||||    
T  2396242 ataagacccggggtcttacttaagacccc-acttttaagagggaccctcaattttttaatattaaaaacttgaaatgtactgatataaagttattgatag 2396340  T
Q  614 ttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgat 712  Q
    ||| ||||||| |  |||||||||| ||| |||| ||| |||| || ||| |||| ||| ||||||||||||| ||||||| ||||||||||||| ||||    
T  2396341 ttgattagtgggttccatttaagaaatttttgtgagatgctgagtttgagcgattgagttcttattaggtactactattaacaaattataaataagtgat 2396440  T
Q  713 gt 714  Q
    ||    
T  2396441 gt 2396442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 457 - 702
Target Start/End: Original strand, 11346865 - 11347116
Alignment:
Q  457 atttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcag 556  Q
    |||||| ||||||||||||||||||| ||||| | | ||||| ||||||  | ||||||||||||  ||||| | ||||||||||| || | ||||||||    
T  11346865 atttaaaactcggtacctattaggtatcttcattagggagaaacttttttggcgtcttataagacccggggtttcacttaagaccctcaatcttaagcag 11346964  T
Q  557 gacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctg 654  Q
    | ||| |||| ||||||||||| |||||| ||| ||||||||||||||||||| ||| ||| ||| ||  ||||||||||||| |||||||| ||| |||    
T  11346965 ggcccacactcttttaatattataaaattaaaatataatgatataaaattattaataattgattaatgcgtctcatttaagaaatttgtgtgagatgctg 11347064  T
Q  655 ----aattggagtgatttagtgcttattaggtactgctattaaaaaattata 702  Q
          |||||| |||| | | ||||||||||||| ||||||||||||||||    
T  11347065 ggttggttggagggattgaatacttattaggtactactattaaaaaattata 11347116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 535 - 714
Target Start/End: Complemental strand, 822541 - 822360
Alignment:
Q  535 taagacccccacttttaagcaggacccgcactt-ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatt 632  Q
    |||||||||||  ||||||| | ||||||||   ||||||||||||||||||||||  || ||||||||  ||||||||||||| ||| ||  |||||||    
T  822541 taagacccccaactttaagcggaacccgcacaacttttaatattaaaaaattgaaatgtagtgatataatgttattgatagttgattaatgtgtctcatt 822442  T
Q  633 taagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    ||||||||||||||| ||||||  |||||| |||| ||| |||||||| |||| ||||||||||| ||||||||||||||||    
T  822441 taagaactttgtgtgagatctgggttggagggattgagtacttattagatactactattaaaaaactataaataaatgatgt 822360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 448 - 714
Target Start/End: Original strand, 8824842 - 8825103
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||||||||||||  |||||||||||||||| || || ||  |||||| ||||| || |||||||||||   ||| |||||||||||||||| |||    
T  8824842 gtcttaactatttaagatccggtacctattaggtatctccagtgaggagaat-tttttcagggtcttataagatccgggatcttacttaagacccc-act 8824939  T
Q  548 tttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 646  Q
    ||||||| |||| | |||| |||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||| | |  |||||||||| ||| |||    
T  8824940 tttaagcgggacgcacactcttttaatatt-aaaaattgaaatataatgatataaagttattgatagttgattagtaggttccatttaagaattttatgt 8825038  T
Q  647 gtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
      ||| || |||| ||| ||| | | |||||||| ||   ||| ||||||||||||||| | ||||||    
T  8825039 aagatatggattgaagtaattgaatacttattagata---ctactaaaaaattataaatgagtgatgt 8825103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 441 - 607
Target Start/End: Complemental strand, 5036213 - 5036047
Alignment:
Q  441 tggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagac 540  Q
    |||| |||||||||| ||||||||| |  || ||||||||||||  || ||| |||| ||||||| |||||||||||||||  ||||||||| |||||||    
T  5036213 tggaagggtcttaaccatttaagacccaatagctattaggtaccc-cattggggagagtctttttcagagtcttataagaccgggggtcttaattaagac 5036115  T
Q  541 ccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattat 607  Q
    || || |||||||| |||| | |||| ||||||||||||||||||||||  |||||||||||| ||||    
T  5036114 cctcaattttaagcgggactctcactcttttaatattaaaaaattgaaatgtaatgatataaagttat 5036047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 526 - 705
Target Start/End: Complemental strand, 10180783 - 10180603
Alignment:
Q  526 ggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattga-aaataatgatataaaattattgatagttgtttagtgg 624  Q
    ||||| ||||||||| |||| | |||||  ||||||  || ||||||||||||||||||||| |  |||||||||||| ||||||||||||| || ||||    
T  10180783 ggtctcacttaagacgcccaatcttaagtgggacccatacctttttaatattaaaaaattgatatgtaatgatataaagttattgatagttgatt-gtgg 10180685  T
Q  625 atctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    |||||||||||||| |||||||  ||| ||   ||||||  ||| ||| ||||||||||||| |||||||||||||||||||    
T  10180684 atctcatttaagaaatttgtgtaagatgctaggttggaggcattgagttcttattaggtactactattaaaaaattataaat 10180603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 501 - 601
Target Start/End: Original strand, 45832497 - 45832599
Alignment:
Q  501 tttttgagagtcttataagactaggggtcttacttaagaccccc-acttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgata 598  Q
    ||||| |||||||||||||||  ||||||||||||||||||||| |||||||||| ||| ||||||  ||||||||||||||| |||||| |||||||||    
T  45832497 ttttttagagtcttataagacacggggtcttacttaagaccccctacttttaagcgggatccgcacccttttaatattaaaaatttgaaatataatgata 45832596  T
Q  599 taa 601  Q
    |||    
T  45832597 taa 45832599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 526 - 743
Target Start/End: Original strand, 35144344 - 35144564
Alignment:
Q  526 ggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtgg 624  Q
    ||||||| |||||||||| | |||||||  |||||| || | ||||||||||||||||||||||  ||||| |||||||||||| || |||  | |||||    
T  35144344 ggtcttatttaagaccccaa-ttttaagtgggacccaca-tattttaatattaaaaaattgaaatgtaatggtataaaattattaatggtttatcagtgg 35144441  T
Q  625 atctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatg--atgttca--tga 720  Q
    ||   ||||||||| ||||| || ||||||  |||||| |||| | |||||||||| |||| ||| ||||||||||||||||| ||  |||| ||  |||    
T  35144442 attctatttaagaaatttgtatgagatctgggttggagggattgaatgcttattagatactactactaaaaaattataaataattgatatgtacacgtga 35144541  T
Q  721 gacccatttaagaaccaaaaaat 743  Q
    |||||||||||  ||||||||||    
T  35144542 gacccatttaaataccaaaaaat 35144564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 525 - 712
Target Start/End: Original strand, 49210981 - 49211170
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtg 623  Q
    ||||||||||||||||| | | |||||||| ||| || | || |||||||||||||||||| |||  |||||||||||| ||||||||| ||| ||| ||    
T  49210981 gggtcttacttaagacctc-atttttaagcgggatcctcgctcttttaatattaaaaaattaaaatgtaatgatataaagttattgataattgattaatg 49211079  T
Q  624 gatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctatt-aaaaaattataaataaatgat 712  Q
    | ||||||||||| | ||| |||| ||| ||   |||||| |||  ||| |||||||| |||| ||||| |||||||||||||||||||||    
T  49211080 ggtctcatttaaggaatttttgtgagatgctaggttggagggatagagttcttattagatactactattaaaaaaattataaataaatgat 49211170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 563 - 647
Target Start/End: Original strand, 30865882 - 30865967
Alignment:
Q  563 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 647  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||  ||||||||||||| ||| ||||    
T  30865882 cacttttttaatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgagtctcatttaagaaatttatgtg 30865967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 449 - 707
Target Start/End: Original strand, 23607230 - 23607490
Alignment:
Q  449 tcttaactatttaagactcggtacctattagg-taccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    ||||||| ||||||||| || ||||||||||| || || || ||  |||||||||||| || |||| |||||||  | | |||||||||||||| ||| |    
T  23607230 tcttaaccatttaagacccgatacctattaggatatctccattgtggagaatctttttcagggtctcataagacccgag-tcttacttaagacctccaat 23607328  T
Q  548 tttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttg-tg 645  Q
     |||||| |||||  |||| |||||||||| ||||||| |||  ||| |||| ||  |||||||||| || |||||||||| ||||| | || |||| ||    
T  23607329 cttaagcgggaccatcactcttttaatattgaaaaattaaaatgtaaagataaaatgttattgatagctgattagtggatcccatttta-aattttgttg 23607427  T
Q  646 tgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataa 707  Q
    || ||| ||| ||| ||| |||| ||| |||| ||| |||| |||||||||||||||||||||    
T  23607428 tgagatgctggattagagagattgagttcttaatagatactactattaaaaaattataaataa 23607490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 618 - 714
Target Start/End: Original strand, 45833896 - 45833991
Alignment:
Q  618 ttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    ||||||| || ||||||||||||||||||| ||||||  ||||||||||| |||||||||||  || | ||||||||||||||||||| | ||||||    
T  45833896 ttagtgggtcccatttaagaactttgtgtgagatctgggttggagtgattgagtgcttatta-atattactattaaaaaattataaatgagtgatgt 45833991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 557 - 712
Target Start/End: Original strand, 12447403 - 12447560
Alignment:
Q  557 gacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctg 654  Q
    ||||| |||| ||| ||| ||||||||||||||  |||||||||||| ||||||||||||| ||||||| ||| ||||||||| ||| |||| ||| |||    
T  12447403 gaccctcactatttcaattttaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggtcttatttaagaaatttttgtgagatgctg 12447502  T
Q  655 aattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgat 712  Q
      ||  |  |||| ||| |||||||   ||| ||||||||||||||||||||| ||||    
T  12447503 ggttaaaaggattgagttcttattatagactactattaaaaaattataaataagtgat 12447560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 591 - 704
Target Start/End: Original strand, 22628488 - 22628602
Alignment:
Q  591 taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgcta 689  Q
    |||||||||||| ||||||||||||| ||||||  || ||||||| || ||||||||||||  ||  |  ||| |||| |||| |||||| ||||| |||    
T  22628488 taatgatataaagttattgatagttgattagtgagtcccatttaaaaaatttgtgtgtgatattgggtcagagagattgagtgtttattatgtactccta 22628587  T
Q  690 ttaaaaaattataaa 704  Q
    |||||||||||||||    
T  22628588 ttaaaaaattataaa 22628602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 557 - 697
Target Start/End: Complemental strand, 41916126 - 41915985
Alignment:
Q  557 gacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctga 655  Q
    |||||||| | |||||||||||||||||| ||| ||||||||||||||||||| ||| ||| || | || ||| |||||| || ||||| ||  || |||    
T  41916126 gacccgcattcttttaatattaaaaaattaaaatataatgatataaaattatttatacttgatttgagggtcttatttaataaatttgtatgaaatatga 41916027  T
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaa 697  Q
     || ||| |||| |||| ||||||  |||| |||||||||||    
T  41916026 gttagagagattaagtgtttattaaatactactattaaaaaa 41915985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 562 - 705
Target Start/End: Original strand, 44500483 - 44500628
Alignment:
Q  562 gcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtga-tctgaattg 659  Q
    ||||| ||||||||||||||||||||||  ||||| ||||||| |||||||||||| |||||| |||| |||| | ||  ||||||| ||  |||| ||     
T  44500483 gcactattttaatattaaaaaattgaaatgtaatgttataaaactattgatagttgattagtgaatctaatttgaaaaaattgtgtgagaggctgagttt 44500582  T
Q  660 gagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
     || |||| |||||||||||  ||||  |||||||| |||||||||    
T  44500583 cagggattaagtgcttattaaatactattattaaaatattataaat 44500628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 568 - 644
Target Start/End: Complemental strand, 54018577 - 54018500
Alignment:
Q  568 ttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| ||||  ||||||| | |||||||| || |||||    
T  54018577 ttttaatattaaaaaattgaaatataataatataaaattattgacagtttattagtgggtttcatttaaaaaatttgt 54018500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 510 - 703
Target Start/End: Original strand, 26698947 - 26699139
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaat-aatgatataaaattatt 608  Q
    |||||||||||  |||||||| |||||||||||| | | |||||  |||| | ||| ||||||||  ||||||||||| | | ||||||||||| |||||    
T  26698947 gtcttataagaacaggggtctcacttaagacccc-attcttaagtgggactcacacctttttaat--taaaaaattgatattcaatgatataaagttatt 26699043  T
Q  609 gatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataa 703  Q
     || |||| ||||||  ||||||||||||| ||||||||  || ||  |||| | ||||| ||| |||||||| || | |||||||||| ||||||    
T  26699044 aatcgttgattagtgtgtctcatttaagaaatttgtgtgaaatgctatattgaaatgattgagttcttattagatattactattaaaaatttataa 26699139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 591 - 646
Target Start/End: Original strand, 51655147 - 51655202
Alignment:
Q  591 taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 646  Q
    |||||||||||||||||||||||||| ||||| | |||||||||| || |||||||    
T  51655147 taatgatataaaattattgatagttgattagttggtctcatttaataaatttgtgt 51655202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 571 - 707
Target Start/End: Complemental strand, 35309110 - 35308972
Alignment:
Q  571 taatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgattt 668  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||  || ||||||| ||  ||||||| | | ||    | ||| ||||     
T  35309110 taatattaaaaaattaaaatataatgatataaagttattgatagttgattagtgagtcccatttaaaaaaattgtgtgagttgctaggctagagggattg 35309011  T
Q  669 agtgcttattaggtactgctattaaaaaattataaataa 707  Q
    ||| |||||||| || | |||||||||||||||||||||    
T  35309010 agtacttattagatattactattaaaaaattataaataa 35308972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 563 - 616
Target Start/End: Complemental strand, 53779486 - 53779432
Alignment:
Q  563 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttg 616  Q
    ||||||||||||||||||||||| ||| |||||||||| || |||||||||||||    
T  53779486 cacttttttaatattaaaaaattaaaatataatgatattaagttattgatagttg 53779432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 494 - 547
Target Start/End: Original strand, 12447359 - 12447412
Alignment:
Q  494 gagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||||||| || ||||||||||||  ||||||||||||||||||| ||||    
T  12447359 gagaatcttttttagtgtcttataagacccggggtcttacttaagaccctcact 12447412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 494 - 539
Target Start/End: Complemental strand, 28909554 - 28909509
Alignment:
Q  494 gagaatctttttgagagtcttataagactaggggtcttacttaaga 539  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||    
T  28909554 gagaatctttttcagagtcttataagacccggggtcttacttaaga 28909509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 549 - 644
Target Start/End: Complemental strand, 2574196 - 2574100
Alignment:
Q  549 ttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
    |||||| ||| || |||| |||||| |||||||||||||||  |||||||||||| ||||| ||||||| |||||| ||   ||||||||| |||||    
T  2574196 ttaagcgggatccacactcttttaacattaaaaaattgaaatgtaatgatataaagttattaatagttgattagtgaattctatttaagaaatttgt 2574100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 710
Target Start/End: Complemental strand, 18743311 - 18743264
Alignment:
Q  664 gatttagtgcttattaggtactgctattaa-aaaattataaataaatg 710  Q
    |||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  18743311 gattgagtgcttattaggtactactattaaaaaaattataaataaatg 18743264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 711
Target Start/End: Complemental strand, 51788936 - 51788881
Alignment:
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatga 711  Q
    |||||||||||| | || |||| || ||||| ||||||||||||||||||||||||    
T  51788936 attggagtgattgaatgtttataagttactgttattaaaaaattataaataaatga 51788881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 562 - 610
Target Start/End: Complemental strand, 25424426 - 25424376
Alignment:
Q  562 gcacttttttaatattaa-aaaattgaaa-ataatgatataaaattattga 610  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  25424426 gcacttttttaatattaaaaaaattgaaatgtaatgatataaaattattga 25424376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 656 - 714
Target Start/End: Original strand, 51175607 - 51175665
Alignment:
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||| ||| ||| |||| ||||||||  |||||||||||||||||||| ||||||    
T  51175607 attggagtcattgagtccttaataggtacttttattaaaaaattataaataagtgatgt 51175665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 525 - 647
Target Start/End: Complemental strand, 40918153 - 40918029
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa--taatgatataaaattattgatagttgtttagt 622  Q
    ||||||||||||| || |||| | |||||| ||||||||| | || |||||||||||| ||  |||  || ||||||||| |||||||| |||| ||  |    
T  40918153 gggtcttacttaatactcccaatcttaagcgggacccgcagtcttctaatattaaaaattttgaaatgtattgatataaagttattgattgttgattgat 40918054  T
Q  623 ggatctcatttaagaactttgtgtg 647  Q
    || | |||||||||||  |||||||    
T  40918053 gggtgtcatttaagaaagttgtgtg 40918029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 569 - 647
Target Start/End: Complemental strand, 41963727 - 41963646
Alignment:
Q  569 tttaatatta-aaaaattgaaa-ataatgatataaaattattgatagttgtttagt-ggatctcatttaagaactttgtgtg 647  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||||| || ||| | ||  |||||||||||| ||||||||    
T  41963727 tttaatattacaaaaaatgaaatataatgatataaaattattgatagatgattaatgggggctcatttaagaaatttgtgtg 41963646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 6e-74; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 6e-74
Query Start/End: Original strand, 446 - 762
Target Start/End: Complemental strand, 31226714 - 31226397
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||||||||||||| | ||||||||||| |||||  ||||| |||||||||||| || ||||||||||||| |||||     |||||||| |||    
T  31226714 gggtcttaactatttaagacccagtacctattagatacctcaaatggggagaatcttttttagggtcttataagacttggggt-----ttaagacctcca 31226620  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| || ||||||||||||||||    
T  31226619 cttttaagcgggacccgcactcttttaatattaaaaaattgaaatataatgatataaaattattgatagttgagtagtgggtcccatttaagaactttgt 31226520  T
Q  645 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttca----tgagacccatttaagaaccaaaa 740  Q
    ||| |||||   |||||||| || |||  |||||||||||| ||||||||||||||||||| | ||||||  |    ||| ||||||||||||||| |||    
T  31226519 gtgagatctaggttggagtgtttgagtatttattaggtactactattaaaaaattataaatgagtgatgtgtacatgtgacacccatttaagaacccaaa 31226420  T
Q  741 aatgagtgttt-cattgtggatg 762  Q
    |||| |||||| |||||||||||    
T  31226419 aatgggtgtttccattgtggatg 31226397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 437 - 714
Target Start/End: Complemental strand, 5536052 - 5535774
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| |  |||| | ||||||| |||  |  |||||||||||   ||||| |||||||    
T  5536052 ccattggaagggtcttaactatttaagacacggtacctattaggtatccccaattgggagaatcatttccaaggtcttataagatccggggttttactta 5535953  T
Q  537 agacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaa 635  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||| || |||| |  | |||||    
T  5535952 agacccccacttttaagcgagacccgcactcttttaatattaaaaaattgaaatataatgatataaagttattgaaagttgatttgtgggttccgtttaa 5535853  T
Q  636 gaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||||||| |||||   ||||||||||| ||||||||| |||||||  |||||||||||||||||| | ||||||    
T  5535852 gaactttgtgtgagatctaggttggagtgattgagtgcttataaggtactaatattaaaaaattataaatgagtgatgt 5535774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 448 - 767
Target Start/End: Complemental strand, 18806815 - 18806491
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||| |||||||||||| || |||||||||||   || ||||| ||||||||||| |||    
T  18806815 gtcttaactatttaagacctggtacatattaggtacccccaatggggagaatctttttcagggtcttataagatccggagtcttgcttaagacccctact 18806716  T
Q  548 tttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 646  Q
    ||||||| ||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||| || |||||||    
T  18806715 tttaagcgggacccgcac-cttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtggatcccatttaaaaaatttgtgt 18806617  T
Q  647 gtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt----tcatgagacccatttaagaaccaaaaaa 742  Q
    | |||||   || |||||||  | || ||||||| |||| ||||||||||||||||||||| ||||||     | ||| |||||||||| || | |||||    
T  18806616 gagatctaggtttgagtgatcgaatgtttattagatactactattaaaaaattataaataagtgatgtgtacacgtgaaacccatttaaaaatccaaaaa 18806517  T
Q  743 tgagtgt-ttcattgtggatggtctt 767  Q
    ||||||| |||||||| |||| ||||    
T  18806516 tgagtgtcttcattgtagatgctctt 18806491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 446 - 672
Target Start/End: Complemental strand, 5978765 - 5978539
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||||||| || ||||||||||||| |||||||||||||  ||||| |    
T  5978765 gggtcttaactatttaagacctggtacctattaggtaccctcaatggggagaatctttttcagggtcttataagactcggggtcttacttactaccccga 5978666  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
    |||||| || ||||||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||| ||||||| || ||||||||||||||||    
T  5978665 cttttaggcgggacccgcactcttttaacattaaaaa-ttgaaatataatgatataaagttattgatagttgattagtgggtcccatttaagaactttgt 5978567  T
Q  645 gtgtgatctgaattggagtgatttagtg 672  Q
    ||  ||||||  ||||||||||| ||||    
T  5978566 gtcagatctgggttggagtgattgagtg 5978539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 449 - 667
Target Start/End: Original strand, 23982122 - 23982344
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccactt 548  Q
    ||||| ||||||||||  |||| ||||||| |||||| ||||||||| ||||||||| || ||||||||||||  ||||||||||||||||||| |||||    
T  23982122 tcttatctatttaagatccggtgcctattaagtacctccaatggagataatctttttcagggtcttataagacccggggtcttacttaagaccctcactt 23982221  T
Q  549 ttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgttta----gtggatctcatttaagaactttg 643  Q
    |||||| ||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||    ||||||| |||||||||||||||    
T  23982222 ttaagcggga-ccacacttttttaatattaaaaaattgaaatataatgatataaagttattgatagttggttagtacgtggatcccatttaagaactttg 23982320  T
Q  644 tgtgtgatctgaattggagtgatt 667  Q
    |||  ||||||  |||||||||||    
T  23982321 tgtaagatctgggttggagtgatt 23982344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 448 - 749
Target Start/End: Complemental strand, 6519290 - 6518986
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||| ||||||||| |||||||||||||| |||| || ||  |||||| ||||| |  ||||| ||| ||| |||||||||||||||||| || ||    
T  6519290 gtcttaaccatttaagacccggtacctattaggcacctccattgaggagaatttttttcaaggtcttgtaatactcggggtcttacttaagacctccgct 6519191  T
Q  548 tttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 646  Q
    ||||||| ||| ||||||| ||||| ||||||||||||||||  |||||||||||| ||||||||||||| ||||||  ||||||||||||| ||||||     
T  6519190 tttaagcgggatccgcactcttttagtattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgagtctcatttaagaaatttgtga 6519091  T
Q  647 g-tgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatg--atgttca--tgagacccatttaagaaccaaaaa 741  Q
    | ||  |||  |||||| |||| | | ||||||||||||| ||||||||||||||||||||| ||  |||| ||  || |||||||||||||| ||||||    
T  6519090 gatg--ctgggttggagagattgaattcttattaggtactactattaaaaaattataaataagtgatatgtgcacgtgggacccatttaagaa-caaaaa 6518994  T
Q  742 atgagtgt 749  Q
    ||||||||    
T  6518993 atgagtgt 6518986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 528 - 710
Target Start/End: Complemental strand, 2603240 - 2603057
Alignment:
Q  528 tcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggat 626  Q
    ||||| |||||||||| |  ||||||| ||  ||||||  ||||||||||||||||||||||  || ||||||||| ||||||||||||| |||||||||    
T  2603240 tcttatttaagaccccaaactttaagcggggtccgcacgcttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtggat 2603141  T
Q  627 ctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatg 710  Q
    ||||||||||||||||||||| |||||| ||||||| |||| ||| |||||||| |||| ||||||||||||||||||||||||    
T  2603140 ctcatttaagaactttgtgtgagatctggattggagggattgagtacttattagatactactattaaaaaattataaataaatg 2603057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 454 - 704
Target Start/End: Complemental strand, 5139912 - 5139667
Alignment:
Q  454 actatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaag 553  Q
    |||||||||||| ||||||||||||| ||||  |||| | |||||||||||| || ||||||||||||| |||||||||||    |||  ||||||||||    
T  5139912 actatttaagacccggtacctattagatacccccaatagggagaatctttttcag-gtcttataagactcggggtcttact----accttcacttttaag 5139818  T
Q  554 caggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatc 652  Q
    | ||||| ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||  | |||||||||| ||||||||| ||||    
T  5139817 cgggaccagcactcttttaatattaaaaaatgaaaatataatgatataaaattattgatagttgattagtgagtttcatttaagagctttgtgtgagatc 5139718  T
Q  653 tgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaa 704  Q
    ||  ||||||||||| |||  |||||||||||| |  | |||||||||||||    
T  5139717 tgggttggagtgattaagt-attattaggtactacattaaaaaaattataaa 5139667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 525 - 714
Target Start/End: Complemental strand, 14426291 - 14426101
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaataa-tgatataaaattattgatagttgtttagtg 623  Q
    |||||||| ||||||||||||||||||||  ||| || |||| |||||||||||||||||| ||| ||| ||||||||||||||||||| |||  |||||    
T  14426291 gggtcttatttaagacccccacttttaagtgggatccacactcttttaatattaaaaaattaaaattaaatgatataaaattattgataattgagtagtg 14426192  T
Q  624 gatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
      || ||||||||||||||||||| ||||||| ||||||||||| |||| |||||||||| ||| |||||||||||||||| || ||||||    
T  14426191 agtcccatttaagaactttgtgtgagatctgagttggagtgattgagtgtttattaggtattgcaattaaaaaattataaagaagtgatgt 14426101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 510 - 653
Target Start/End: Original strand, 9134089 - 9134233
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattatt 608  Q
    ||||||||||||| |||||||||||||||| || | ||||||||| ||| ||||||| |||||||||||||||||||||| ||||||||||||| |||||    
T  9134089 gtcttataagactcggggtcttacttaagatcctcccttttaagcgggatccgcactcttttaatattaaaaaattgaaatataatgatataaagttatt 9134188  T
Q  609 gatagttgtttagtggatctcatttaagaactttgtgtgtgatct 653  Q
    |||||||| ||||||  |||||||||||||||||||||| |||||    
T  9134189 gatagttgattagtgagtctcatttaagaactttgtgtgagatct 9134233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 524 - 714
Target Start/End: Complemental strand, 31128728 - 31128537
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagt 622  Q
    ||||||||||||||||   |||||||||||  ||||||||||| || ||||||||| ||||||||| ||||||||||||| ||||||||||||  |||||    
T  31128728 ggggtcttacttaagaattccacttttaagagggacccgcactcttataatattaacaaattgaaatataatgatataaagttattgatagtttattagt 31128629  T
Q  623 ggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
     | |||||||||||||||||||| | ||| |   || |||||||| | ||||||||||||||| ||||||||||||||||||| | ||||||    
T  31128628 aggtctcatttaagaactttgtgagagatttaggttagagtgattgaatgcttattaggtactactattaaaaaattataaatgagtgatgt 31128537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 446 - 714
Target Start/End: Complemental strand, 37674011 - 37673737
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||  |||||||||||||||||||||||||| || || ||| | |||| ||||| |   ||||||||||||  |  ||||| ||||||||||||    
T  37674011 gggtcttaaacatttaagactcggtacctattaggtatctccattggggtgaatttttttcaagatcttataagactcagaatcttatttaagaccccca 37673912  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaatt-gaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
      ||||||| ||  ||  ||  |||||||||||||||||| |||  || ||||||||||||||||||||||| ||||||| ||  |||||||||||||||    
T  37673911 actttaagcggggtccatacgcttttaatattaaaaaattagaatgtagtgatataaaattattgatagttgattagtgggtccaatttaagaactttgt 37673812  T
Q  645 gtgtgatctgaattggagtga-----tttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    ||| |||||| ||||||| ||     || ||| ||||||||||||| ||||||||||||||||||| | ||||||    
T  37673811 gtgagatctggattggagggattaagttaagtacttattaggtactactattaaaaaattataaatgagtgatgt 37673737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 510 - 712
Target Start/End: Complemental strand, 11777853 - 11777650
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattatt 608  Q
    |||||||||||||  || |||||||||||| || || | |||| | |||| |||||| ||||||||||||||| ||||||  |||||||||||| |||||    
T  11777853 gtcttataagactctggatcttacttaagatcctcaatcttaaacgggactcgcactcttttaatattaaaaagttgaaatgtaatgatataaagttatt 11777754  T
Q  609 gatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaa 708  Q
    |||||||| ||||| | ||||||||||||| ||||||||  || || |||| || |||| | ||||| ||||||||| ||||||| ||||||||||| ||    
T  11777753 gatagttgattagtaggtctcatttaagaaatttgtgtgatatatggattgcagggattgaatgcttgttaggtactactattaagaaattataaatgaa 11777654  T
Q  709 tgat 712  Q
    ||||    
T  11777653 tgat 11777650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 513 - 714
Target Start/End: Complemental strand, 1155323 - 1155117
Alignment:
Q  513 ttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-----taatgatataaaattat 607  Q
    |||||||||  | |||||||||||||||| ||| | |||||| |||| | |||| ||||||||||||||||||||||      |||||||||||| ||||    
T  1155323 ttataagacccgaggtcttacttaagacctccaatcttaagcgggactcacactcttttaatattaaaaaattgaaatgtaattaatgatataaagttat 1155224  T
Q  608 tgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataa 707  Q
    || |||||| ||| |   ||||||||||||| |||||||| ||||||  |||||| |||| | |||||||||| |||| ||||||||||||||||||| |    
T  1155223 tggtagttgattaatatgtctcatttaagaaatttgtgtgagatctgggttggagggattgaatgcttattagatactactattaaaaaattataaatga 1155124  T
Q  708 atgatgt 714  Q
     ||||||    
T  1155123 gtgatgt 1155117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 457 - 705
Target Start/End: Original strand, 28540556 - 28540806
Alignment:
Q  457 atttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcag 556  Q
    |||||||||  | |||||||||| |||| ||| ||| |||||  |||||  | |||||||||||| | | |||| |||||||| || || | ||| || |    
T  28540556 atttaagacctgatacctattagttaccctcattggggagaagttttttcggggtcttataagaccacgagtctcacttaagaacctcaatcttatgcgg 28540655  T
Q  557 gacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctg 654  Q
    ||| | |||| ||||||||||||||||||||||  ||||||||||||| |||||||||||| ||||||  |||| |||||||| |||||||| ||| |||    
T  28540656 gactcacactcttttaatattaaaaaattgaaatgtaatgatataaaactattgatagttgattagtgagtctcttttaagaaatttgtgtgagatgctg 28540755  T
Q  655 aattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
      ||||||| ||| | | ||||||| ||||| |||||||||||||||||||    
T  28540756 ggttggagtaattgaatacttattaagtactactattaaaaaattataaat 28540806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 501 - 705
Target Start/End: Complemental strand, 9604697 - 9604491
Alignment:
Q  501 tttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatat 599  Q
    ||||| || |||||| |||||| ||||||||| |||||| ||||| |||||||| ||| || |||| ||||||| ||||||||||||||  |||||||||    
T  9604697 ttttttagggtcttacaagactcggggtcttatttaagatccccatttttaagcgggatcctcactcttttaatgttaaaaaattgaaatctaatgatat 9604598  T
Q  600 aaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaat 698  Q
    ||| ||||||||||||| ||||||| |  |||||||||| ||| | || ||| |||  |||||  |||| ||| |||||||| ||||  |||||||||||    
T  9604597 aaagttattgatagttgattagtgggttccatttaagaaatttttatgagatgctgggttggatggattgagttcttattagatactattattaaaaaat 9604498  T
Q  699 tataaat 705  Q
    |||||||    
T  9604497 tataaat 9604491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 446 - 714
Target Start/End: Original strand, 35468207 - 35468475
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||  ||||||||| ||||||||||||||||||     ||  | |||| ||||| |  ||||||||||||  ||||||||| |||||||| |||    
T  35468207 gggtcttaaacatttaagacccggtacctattaggtacccctgttgaggtgaatttttttcaaggtcttataagacccggggtcttatttaagaccacca 35468306  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
      ||||||| || | |||||  |||||||||||||||||| |||  || ||  ||||| ||||||||||||  ||||||  ||||||||||||||||||     
T  35468307 actttaagcggggctcgcacgcttttaatattaaaaaattcaaatgtagtggcataaagttattgatagttaattagtgagtctcatttaagaactttga 35468406  T
Q  645 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    ||| |||| |  |||||| |||| ||| ||||||| ||||||||||| ||||||||||||| | ||||||    
T  35468407 gtgagatcagtgttggagggattgagtacttattaagtactgctatt-aaaaattataaatgagtgatgt 35468475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 563 - 707
Target Start/End: Complemental strand, 35973519 - 35973373
Alignment:
Q  563 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattgg 660  Q
    ||||||||||||||||||||||||| | ||||||||||||  ||||||||| ||| ||||| ||||||||||||||| | |||||| |||  ||| ||||    
T  35973519 cacttttttaatattaaaaaattgatatataatgatataatgttattgataattgattagtagatctcatttaagaaatgtgtgtgagatattgagttgg 35973420  T
Q  661 agtgatttagtgcttattaggtactgctattaaaaaattataaataa 707  Q
    |  |||| |||| |||||||||||  |||||||||||||||||||||    
T  35973419 atggattaagtgtttattaggtacaactattaaaaaattataaataa 35973373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 525 - 653
Target Start/End: Original strand, 9133756 - 9133884
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtg 623  Q
    |||| ||||||||||||| ||||||||||| ||| ||||||| ||||||||||| |||||||||| |||||||||| || || ||| |||||| ||||||    
T  9133756 gggttttacttaagaccctcacttttaagcgggatccgcactcttttaatattagaaaattgaaatataatgatat-aagtttttggtagttgattagtg 9133854  T
Q  624 gatctcatttaagaactttgtgtgtgatct 653  Q
      |||||||||||||||||||||| |||||    
T  9133855 agtctcatttaagaactttgtgtgagatct 9133884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 566 - 712
Target Start/End: Original strand, 3628223 - 3628369
Alignment:
Q  566 ttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtg 664  Q
    |||||||||||||||||||||| |  |||||||||||| |||||| |||||| ||| || || ||||||||||| |||||| |  | |||| ||||||      
T  3628223 ttttttaatattaaaaaattgagatgtaatgatataaagttattgctagttgattaatgaatttcatttaagaaatttgtgagata-ctgagttggagga 3628321  T
Q  665 atttagtgcttattaggtactgctattaaaaaattataaataaatgat 712  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  3628322 atttagtgcttattaagcactactattaaaaaattataaataaatgat 3628369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 541 - 697
Target Start/End: Complemental strand, 16531724 - 16531567
Alignment:
Q  541 ccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaac 639  Q
    ||||| |||||||| ||| ||||||  |||||||||||||||||||||| ||||||||||||| ||||  ||||||| ||||| |||||| ||||||||     
T  16531724 ccccatttttaagcgggatccgcacaattttaatattaaaaaattgaaatataatgatataaagttatgaatagttgattagtagatctcttttaagaat 16531625  T
Q  640 tttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaa 697  Q
    ||||| || |||||   ||||| ||||| |||||||||||  || | |||||||||||    
T  16531624 tttgtatgagatctaggttggaatgattgagtgcttattaaatattactattaaaaaa 16531567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 510 - 696
Target Start/End: Complemental strand, 8673785 - 8673597
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa--taatgatataaaattat 607  Q
    ||||||||||||| | ||||| ||||||||||| || | ||||   ||||||  |||||||||||||||||||| ||||||  || ||||||||| || |    
T  8673785 gtcttataagactcgaggtctcacttaagaccctcaatcttaaatgggacccaaacttttttaatattaaaaaa-tgaaaatgtagtgatataaagtttt 8673687  T
Q  608 tgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaa 696  Q
    ||||| ||| ||||||| ||  |||||| || ||| |||| ||| |||  |||||| |||| ||||||||||||||||| ||||||||||    
T  8673686 tgataattgattagtgggtcaaatttaaaaaatttatgtgagatgctgggttggagagattgagtgcttattaggtactactattaaaaa 8673597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 568 - 703
Target Start/End: Original strand, 23036790 - 23036927
Alignment:
Q  568 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtga 665  Q
    |||||||||||||||||||| |  |||||||||||||||||||||||||| | ||||||| ||  ||||||| |||||||| ||| |||  ||| || ||    
T  23036790 ttttaatattaaaaaattgatatgtaatgatataaaattattgatagttgatcagtggatttctattaagaaatttgtgtgagatgctgggttgaagaga 23036889  T
Q  666 tttagtgcttattaggtactgctattaaaaaattataa 703  Q
    || ||| |||||||| |||| ||||| |||||||||||    
T  23036890 ttgagttcttattagatactactattgaaaaattataa 23036927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 524 - 616
Target Start/End: Original strand, 28567759 - 28567852
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttg 616  Q
    ||||||| ||||||||||| || | |||||| |||||| | || |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  28567759 ggggtctcacttaagaccctcaatcttaagcgggacccactctattttaatattaaaaaattgaaatataatgatataaagttattgatagttg 28567852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 524 - 616
Target Start/End: Original strand, 28575352 - 28575445
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttg 616  Q
    ||||||| ||||||||||| || | |||||| |||||| | || |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  28575352 ggggtctcacttaagaccctcaatcttaagcgggacccactctcttttaatattaaaaaattgaaatataatgatataaagttattgatagttg 28575445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 446 - 712
Target Start/End: Original strand, 38937666 - 38937934
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgaga-gtcttataagactaggggtcttacttaagaccccc 544  Q
    ||||||||||||||||||||||||||| || ||||||||| || ||   |   |||||||  || ||||||||||||   | |||||||||||||||||     
T  38937666 gggtcttaactatttaagactcggtacttaataggtacctccattgtgaaatttcttttttggaagtcttataagacccagagtcttacttaagacccca 38937765  T
Q  545 acttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttg 643  Q
    | | |||||  | |||| ||  ||||||||||||||||||| | |  | |||||||||| || |||||||||| || |||||||  |||||| |||||||    
T  38937766 a-tcttaagtggaacccacatctttttaatattaaaaaattaatatgtgatgatataaagttgttgatagttgatttgtggatcctatttaaaaactttg 38937864  T
Q  644 tgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgat 712  Q
    |||| |||  ||  |||||| |||| ||| ||||||||||    ||||||||||||||||||||| ||||    
T  38937865 tgtgagatgttgtgttggagggattgagttcttattaggtgtcactattaaaaaattataaataagtgat 38937934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 567 - 744
Target Start/End: Complemental strand, 13629166 - 13628983
Alignment:
Q  567 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatct-gaattggagtg 664  Q
    ||||||||||||||||||||| |  ||||| |||||| ||||||||||||| ||  ||||||  ||||||||| ||||| || ||| | |  |||||| |    
T  13629166 tttttaatattaaaaaattgatatgtaatggtataaagttattgatagttgatttctggatcctatttaagaattttgtatgagatgttgggttggaggg 13629067  T
Q  665 atttagtgcttattaggtactgctattaaaaaattataaataaatgatgttca----tgagacccatttaagaaccaaaaaatg 744  Q
    ||| | | |||||||| |||| ||||||||||||||||||| ||||||||  |    ||||||||||||||||||  |||||||    
T  13629066 attgactacttattagatactactattaaaaaattataaatgaatgatgtgtacatgtgagacccatttaagaactcaaaaatg 13628983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 567 - 744
Target Start/End: Complemental strand, 13729578 - 13729395
Alignment:
Q  567 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatct-gaattggagtg 664  Q
    ||||||||||||||||||||| |  ||||| |||||| ||||||||||||| ||  ||||||  ||||||||| ||||| || ||| | |  |||||| |    
T  13729578 tttttaatattaaaaaattgatatgtaatggtataaagttattgatagttgatttctggatcctatttaagaattttgtatgagatgttgggttggaggg 13729479  T
Q  665 atttagtgcttattaggtactgctattaaaaaattataaataaatgatgttca----tgagacccatttaagaaccaaaaaatg 744  Q
    ||| | | |||||||| |||| ||||||||||||||||||| ||||||||  |    ||||||||||||||||||  |||||||    
T  13729478 attgactacttattagatactactattaaaaaattataaatgaatgatgtgtacatgtgagacccatttaagaactcaaaaatg 13729395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 510 - 714
Target Start/End: Original strand, 28557184 - 28557390
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattatt 608  Q
    |||||||||||| | |||||| ||||||||||| || | ||| |  ||| || |||| ||||||||||||||||||||||  |||| |||||||| | ||    
T  28557184 gtcttataagaccacgggtctcacttaagaccctcaatcttatgtgggatccacactcttttaatattaaaaaattgaaatgtaataatataaaagtgtt 28557283  T
Q  609 gatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataa 707  Q
    |||||||| ||||||  |||| ||||| ||  || |||| ||| ||   ||||||  ||| |||  |||||||||||| ||||||||||||||||||| |    
T  28557284 gatagttgattagtgagtctcttttaaaaaaattatgtgagatcctaggttggaggaattgagtagttattaggtactactattaaaaaattataaatta 28557383  T
Q  708 atgatgt 714  Q
     ||||||    
T  28557384 gtgatgt 28557390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 513 - 624
Target Start/End: Complemental strand, 10954255 - 10954143
Alignment:
Q  513 ttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgat 611  Q
    |||||||||  | ||||| ||||||||| | || |||| ||| |||| |||| | ||||||||||||||||||||||  |||||||||||||| ||||||    
T  10954255 ttataagacccgaggtctcacttaagactctcaatttttagcgggactcgcaatcttttaatattaaaaaattgaaatgtaatgatataaaataattgat 10954156  T
Q  612 agttgtttagtgg 624  Q
    ||||| |||||||    
T  10954155 agttgattagtgg 10954143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 513 - 624
Target Start/End: Complemental strand, 10962260 - 10962148
Alignment:
Q  513 ttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgat 611  Q
    |||||||||  | ||||| ||||||||| | || |||| ||| |||| |||| | ||||||||||||||||||||||  |||||||||||||| ||||||    
T  10962260 ttataagacccgaggtctcacttaagactctcaatttttagcgggactcgcaatcttttaatattaaaaaattgaaatgtaatgatataaaataattgat 10962161  T
Q  612 agttgtttagtgg 624  Q
    ||||| |||||||    
T  10962160 agttgattagtgg 10962148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 524 - 616
Target Start/End: Original strand, 28562261 - 28562354
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttg 616  Q
    ||||||| ||||||||||| || | |||||| |||||| | || |||||||||||||||||||||| ||||| ||||||| |||||||| ||||    
T  28562261 ggggtctcacttaagaccctcaatcttaagcgggacccactctattttaatattaaaaaattgaaatataataatataaagttattgattgttg 28562354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 6427242 - 6427150
Alignment:
Q  556 ggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 647  Q
    |||||| ||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| | ||  |||||| || ||||||||    
T  6427242 ggacccacactagtttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagtaggtcctatttaaaaaatttgtgtg 6427150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 446 - 505
Target Start/End: Original strand, 9133694 - 9133753
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatcttttt 505  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||   |||||||||||    
T  9133694 gggtcttaactatttaagacccggtacctattaggtacctccaatgagaagaatcttttt 9133753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 458 - 647
Target Start/End: Original strand, 12733931 - 12734118
Alignment:
Q  458 tttaagactcggtacctattaggtaccttcaatggagagaatctttttgagag-tcttataagactaggggtcttacttaagacccccacttttaagcag 556  Q
    |||||||||| ||||||||||||||||  ||||   ||||| |||||| |||| ||||||||||||   ||||| |||||||||| ||| | ||||   |    
T  12733931 tttaagactcagtacctattaggtaccc-caattaggagaaacttttt-agaggtcttataagactcatggtctcacttaagaccaccaatcttaatgtg 12734028  T
Q  557 gacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 647  Q
     |||  ||||||||||||||||||||||| |||  |||||||||||| ||   |||||||| ||||||| ||||||||||||| ||||||||    
T  12734029 -acctacacttttttaatattaaaaaattaaaatgtaatgatataaagttgaggatagttgattagtgg-tctcatttaagaaatttgtgtg 12734118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 497 - 575
Target Start/End: Original strand, 5217195 - 5217273
Alignment:
Q  497 aatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaata 575  Q
    ||||||||| || ||||||||||||  |  ||||||| |||||||||||||||||||| |||||| |||| ||||||||    
T  5217195 aatctttttcagggtcttataagacccgaagtcttacctaagacccccacttttaagcgggaccctcactcttttaata 5217273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 591 - 707
Target Start/End: Complemental strand, 30714153 - 30714036
Alignment:
Q  591 taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatct-gaattggagtgatttagtgcttattaggtactgcta 689  Q
    |||||||||||| ||||||||||||| ||||||  || ||||||  || |||||||| ||| | | ||||||   ||| ||||||||||| ||||| |||    
T  30714153 taatgatataaagttattgatagttgattagtgagtcccatttacaaaatttgtgtgagatgttggattggaaatattaagtgcttattatgtactacta 30714054  T
Q  690 ttaaaaaattataaataa 707  Q
    |||||| |||||||||||    
T  30714053 ttaaaatattataaataa 30714036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 591 - 707
Target Start/End: Complemental strand, 30721930 - 30721813
Alignment:
Q  591 taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatct-gaattggagtgatttagtgcttattaggtactgcta 689  Q
    |||||||||||| ||||||||||||| ||||||  || ||||||  || |||||||| ||| | | ||||||   ||| ||||||||||| ||||| |||    
T  30721930 taatgatataaagttattgatagttgattagtgagtcccatttacaaaatttgtgtgagatgttggattggaaatattaagtgcttattatgtactacta 30721831  T
Q  690 ttaaaaaattataaataa 707  Q
    |||||| |||||||||||    
T  30721830 ttaaaatattataaataa 30721813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 590 - 712
Target Start/End: Original strand, 7288241 - 7288364
Alignment:
Q  590 ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgct 688  Q
    ||||||||||||| |||| |||||||| |||||   ||||||||||||| ||| | || ||| |||  |||||| |||| ||| |||||||| |||| ||    
T  7288241 ataatgatataaagttatcgatagttgattagtaagtctcatttaagaaatttctatgagatgctgggttggagggattaagttcttattagatactact 7288340  T
Q  689 attaaaaaattataaataaatgat 712  Q
    || ||| |||||||||||| ||||    
T  7288341 atgaaacaattataaataagtgat 7288364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 446 - 517
Target Start/End: Complemental strand, 16531799 - 16531728
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttata 517  Q
    |||| |||||||||||| | |||||||||||||||||| || ||||| || ||||||||| | |||||||||    
T  16531799 gggtgttaactatttaaaattcggtacctattaggtacttttaatggggaaaatctttttcaaagtcttata 16531728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 439 - 517
Target Start/End: Complemental strand, 31129693 - 31129615
Alignment:
Q  439 attggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttata 517  Q
    |||||| |||||| ||||||||||||| |||||| ||||||||||| | ||||   ||||||||||| || ||||||||    
T  31129693 attggaagggtctaaactatttaagacccggtacttattaggtacccttaatgagaagaatctttttcagggtcttata 31129615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 656 - 714
Target Start/End: Original strand, 43976699 - 43976757
Alignment:
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||| ||| ||| |||| ||||||||  |||||||||||||||||||||||||||    
T  43976699 attggagtcattgagtccttaataggtacttttattaaaaaattataaataaatgatgt 43976757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 582 - 685
Target Start/End: Complemental strand, 23812686 - 23812580
Alignment:
Q  582 aattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaacttt-gtgtgtgat-ctgaattggagtgatttagtgcttatt 678  Q
    |||||||| ||||| ||||||| ||||||||||||| |||||| ||  ||||||| || ||| ||||| ||| ||  ||||||| |||| ||||||||||    
T  23812686 aattgaaatataattatataaagttattgatagttgattagtgaataccatttaaaaaattttgtgtgagatgctagattggagagattgagtgcttatt 23812587  T
Q  679 aggtact 685  Q
    |||||||    
T  23812586 aggtact 23812580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 567 - 616
Target Start/End: Original strand, 36316757 - 36316806
Alignment:
Q  567 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttg 616  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  36316757 tttttaatattaaaaa-ttgaaatgtaatgatataaaattattgatagttg 36316806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 5e-68; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 448 - 739
Target Start/End: Complemental strand, 47783901 - 47783605
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||||||||||||| | |||||||||| | |||  |||||| || ||||||||| || ||||||||||||  ||||||||||||||||||||||||    
T  47783901 gtcttaactatttaagacccagtacctattaagaacccccaatggggaaaatctttttcagggtcttataagacccggggtcttacttaagacccccact 47783802  T
Q  548 tttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 646  Q
    ||||||| |||| | |||| | |||||||||||||||||||| ||||||||||||||||||||||||||| ||| | | |  ||||||||||||||||||    
T  47783801 tttaagcgggactcacactctattaatattaaaaaattgaaatataatgatataaaattattgatagttgattaataggttccatttaagaactttgtgt 47783702  T
Q  647 gtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt----tcatgagacccatttaagaaccaaa 739  Q
    | ||| ||| ||||||||||| |||| ||||||  ||||  ||||||||||||||||| |||||||||     | ||||||||||||||||||||||    
T  47783701 gagatttgagttggagtgattgagtgtttattaaatactattattaaaaaattataaacaaatgatgtgtacacgtgagacccatttaagaaccaaa 47783605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 446 - 714
Target Start/End: Complemental strand, 32452008 - 32451739
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||||||||||||| |||||| |||||||||||   |||||||||||||||||| ||  |||||||||||  || |||||| |||||||| |||    
T  32452008 gggtcttaactatttaagacccggtacatattaggtacccctaatggagagaatctttttcaggatcttataagacatggagtcttatttaagacctcca 32451909  T
Q  546 cttttaagcaggacccgcacttttttaatattaa-aaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttg 643  Q
    |||||||  ||||| | ||||  ||||||||||| |||| ||||| | ||||||||||| ||||||||| ||  ||||||| |||||||||||||||||     
T  32451908 cttttaaataggacacacactcatttaatattaaaaaaaatgaaatacaatgatataaagttattgataatttattagtgggtctcatttaagaacttt- 32451810  T
Q  644 tgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||| ||||||| ||||||||||| | ||||||||||||| | ||||||||||||||||||| | ||||||    
T  32451809 tgtgagatctgagttggagtgattgaatgcttattaggtattactattaaaaaattataaattagtgatgt 32451739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 447 - 705
Target Start/End: Original strand, 23333637 - 23333894
Alignment:
Q  447 ggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccac 546  Q
    |||||||||||||||||| |||||  ||||||| ||  ||||||||||| ||||||||| |  || |||||| ||  | | ||||||||| |||||  ||    
T  23333637 ggtcttaactatttaagattcggtgtctattagatattttcaatggagaaaatctttttcaaggttttataaaacccgtg-tcttacttaggaccct-ac 23333734  T
Q  547 ttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtg 645  Q
    |||||||| ||| ||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||| | ||||  ||||||||||||||| ||||    
T  23333735 ttttaagcgggatccgtacttttttaatattaaaaaattgaaatataataatataaagttattgatatttgatcagtgagtctcatttaagaactgtgtg 23333834  T
Q  646 tgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    || ||||||  ||||||||||| ||||||||||| |||||  ||||||||||||||||||    
T  23333835 tgagatctgggttggagtgattgagtgcttattaagtactattattaaaaaattataaat 23333894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 528 - 705
Target Start/End: Original strand, 42831601 - 42831780
Alignment:
Q  528 tcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggat 626  Q
    ||||| ||||||| ||||||||||||| ||||||||||  |||||||||||||||||| |||  |||||||||||||||||||||||||| ||| |||||    
T  42831601 tcttatttaagacacccacttttaagcgggacccgcacacttttaatattaaaaaattaaaatgtaatgatataaaattattgatagttgattaatggat 42831700  T
Q  627 ctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    |||||||||||| ||| |||| ||| ||   ||||||  ||||||| ||||||||||||| |||||||||||||||||||    
T  42831701 ctcatttaagaaatttttgtgagatgctaggttggaggaatttagttcttattaggtactactattaaaaaattataaat 42831780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 525 - 744
Target Start/End: Original strand, 43822730 - 43822953
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtg 623  Q
    |||||||| |||||||||| ||||| || | |||||  |||| ||||||||||||||||||||||  || ||||||||| ||||||||||||| ||||||    
T  43822730 gggtcttatttaagaccccaactttaaa-cgggacctacactcttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtg 43822828  T
Q  624 gatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt----tcatg 719  Q
    | || ||||||||||||||||||| ||||||  ||||||  ||| |||||||||||| |||| ||||||||||||||||||| | ||||||     | ||    
T  43822829 ggtcccatttaagaactttgtgtgagatctgggttggaggaattgagtgcttattagatactactattaaaaaattataaatgagtgatgtgtacgcgtg 43822928  T
Q  720 agacccatttaagaaccaaaaaatg 744  Q
     ||||||||||||||||||||||||    
T  43822929 ggacccatttaagaaccaaaaaatg 43822953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 437 - 714
Target Start/End: Original strand, 11120435 - 11120695
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||  ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||  ||                 |||||||||||    
T  11120435 ccattgggagggtcttaactttttaaaactcggtacctattaggtaccttcaatggggagaatcttttccag-----------------ggtcttactta 11120517  T
Q  537 agacccccacttttaagcaggacccgcact-tttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaa 635  Q
    ||||| | |||||||||| ||| ||||||| |||||||||||||||| |  || ||||||||||||| ||||||||||||| |||||||||   ||||||    
T  11120518 agacctc-acttttaagcgggatccgcactctttttaatattaaaaattaaaatataatgatataaagttattgatagttgattagtggattgtatttaa 11120616  T
Q  636 gaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||||||| ||||||  ||||||| ||| |||| ||||||| |||| |||||||| |||||||||| | ||||||    
T  11120617 gaactttgtgtgagatctgcgttggagtaattgagtgtttattagatactactattaaagaattataaatgagtgatgt 11120695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 457 - 743
Target Start/End: Original strand, 27544257 - 27544548
Alignment:
Q  457 atttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcag 556  Q
    ||||||||| || || ||||||||||||  || | | ||||| |||||| |  || |||||||||| ||||||||| |||||||||||| | |||||  |    
T  27544257 atttaagacccgatatctattaggtacccccatttgggagaaactttttcaaggttttataagactcggggtcttatttaagacccccaatcttaagtgg 27544356  T
Q  557 gacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctga 655  Q
    ||||| |||| ||||||||||||||| ||||||  ||||||  |||| ||| ||||| ||||||| ||| ||||||||||||||| |||||  ||||||     
T  27544357 gacccacactcttttaatattaaaaagttgaaatgtaatgacttaaagttagtgataattgtttaatgggtctcatttaagaactgtgtgtcagatctgg 27544456  T
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt----tcatgagacccatttaagaaccaaaaaat 743  Q
     |||||| |||| |||||||||||| | ||  |||||||||||||||||| | ||||||     ||||||||||||||||| ||||||||||    
T  27544457 gttggagggattgagtgcttattagatgctattattaaaaaattataaatgagtgatgtgtacacatgagacccatttaagtaccaaaaaat 27544548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 448 - 682
Target Start/End: Complemental strand, 40287232 - 40287000
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||  ||||||||| |||||| ||||||||| || ||  || |||||| ||||| || ||||||||||||  || |||||||||||||||| ||      
T  40287232 gtcttaaacatttaagacccggtacgtattaggtatct-catcggggagaatatttttcagggtcttataagacccggagtcttacttaagacccacaac 40287134  T
Q  548 tttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 646  Q
    ||||||| |||||| ||| ||||||||||||||||||| |||  ||||||||  |||||||||||||||| |||| || || ||||||| ||||||||||    
T  40287133 tttaagcgggacccacacctttttaatattaaaaaattaaaatgtaatgata--aaattattgatagttgattagcgggtcccatttaataactttgtgt 40287036  T
Q  647 gtgatctgaattggagtgatttagtgcttattaggt 682  Q
    | ||||||  |||||| |||||||||||||||||||    
T  40287035 gagatctgggttggagggatttagtgcttattaggt 40287000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 457 - 714
Target Start/End: Original strand, 25813622 - 25813879
Alignment:
Q  457 atttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcag 556  Q
    |||||||||  | ||| ||||||||||| ||| ||| | |||| ||||| |  ||||||||||||  ||||||||| ||||||||||||  ||||||| |    
T  25813622 atttaagacctgatacttattaggtaccctcattggggtgaatttttttcaaggtcttataagacacggggtcttatttaagacccccaactttaagcgg 25813721  T
Q  557 gacccgcacttttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaa 656  Q
    | |  |||   ||||||||||||||| || ||  || ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| ||||||      
T  25813722 ggcttgcaggcttttaatattaaaaatttaaatgtagtgatataaaattattgatagttgattagtgggtctcatttaagaactttgcgtgagatctggg 25813821  T
Q  657 ttggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||| ||   ||| ||||||| ||||| ||||||||||||||||||| | ||||||    
T  25813822 ttggagggaccgagtacttattatgtacttctattaaaaaattataaatgagtgatgt 25813879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 446 - 624
Target Start/End: Original strand, 36297858 - 36298036
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    ||||||||||||||||| |  ||||| ||||||||||||| || ||| |||| | ||||| || ||||  ||||||  | ||| |||||||||||| |||    
T  36297858 gggtcttaactatttaaaatccggtatctattaggtacctccattggggagagtatttttcagggtctcctaagacc-gaggttttacttaagacctcca 36297956  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtgg 624  Q
    |||||||||  ||||| |||| ||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  36297957 cttttaagcgagaccctcactattttaatattaaaaaattgaaatgtaatgatataaaattattgatagttgattagtgg 36298036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 451 - 615
Target Start/End: Original strand, 38901886 - 38902051
Alignment:
Q  451 ttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccactttt 550  Q
    ||||||||||||||| |||| |||||||||||||| |||||| | |||||||||| || ||||||||||||  ||  ||||| ||||||| |  ||||||    
T  38901886 ttaactatttaagacccggtgcctattaggtacctccaatggggggaatctttttcagggtcttataagacccggaatcttatttaagactcatactttt 38901985  T
Q  551 aagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagtt 615  Q
    |||| |||| || ||| |||||||||||||||||| ||| ||||||||||||| ||||| ||||||    
T  38901986 aagcgggactcgtactcttttaatattaaaaaattaaaatataatgatataaagttattaatagtt 38902051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 510 - 705
Target Start/End: Original strand, 13983976 - 13984172
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattatt 608  Q
    ||||||||||||  ||||||||| |||||||| |||  ||||||| |   |  |||  ||||||||||||||||||||||  || ||||||||| |||||    
T  13983976 gtcttataagacatggggtcttatttaagacctccaactttaagcggagacaacacgcttttaatattaaaaaattgaaatgtagtgatataaagttatt 13984075  T
Q  609 gatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    |||||||| ||||| | ||||||||||||| |||||||| ||||||  || ||| |||| ||| |||||||| |||| |||||||||||||||||||    
T  13984076 gatagttgattagtaggtctcatttaagaattttgtgtgagatctgggttagagagattgagtacttattagatactactattaaaaaattataaat 13984172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 564 - 714
Target Start/End: Complemental strand, 52353920 - 52353769
Alignment:
Q  564 acttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattgga 661  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| |   ||||||||| |||||||| ||| |||  |||||    
T  52353920 acttttttaatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggttctatttaagaaatttgtgtgagatgctgc-ttgga 52353822  T
Q  662 gtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    | |||  ||||||||||||||||||||||||||||||||||||| | ||||||    
T  52353821 gggatcgagtgcttattaggtactgctattaaaaaattataaattagtgatgt 52353769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 446 - 745
Target Start/End: Original strand, 36166766 - 36167069
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||  ||||||||||||||||||||||||||||| || ||| |  ||| ||||| |  |||||||||||     ||||||| ||||||||||||    
T  36166766 gggtcttaaacatttaagactcggtacctattaggtacctccattggggtcaatttttttcaaggtcttataagatccatggtcttatttaagaccccca 36166865  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
      ||||||| || |||||||  ||||||||| |||||||| |||  || ||||||||| ||||||||||||  ||||||  ||  ||||||||| |||||    
T  36166866 actttaagcggggcccgcacgcttttaatatgaaaaaattaaaatgtagtgatataaagttattgatagtttattagtgagtccaatttaagaattttgt 36166965  T
Q  645 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttca----tgagacccatttaagaaccaaaa 740  Q
    |||  || |   ||||||  ||| |||  |||||||||||| | ||||||||||||||||||||||||||  |    || ||||||||||||||| ||||    
T  36166966 gtgacatttaggttggaggaattgagtaattattaggtactac-attaaaaaattataaataaatgatgtgtacatgtgggacccatttaagaactaaaa 36167064  T
Q  741 aatga 745  Q
    |||||    
T  36167065 aatga 36167069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 437 - 614
Target Start/End: Complemental strand, 24556024 - 24555864
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||   ||||| |||||||||||| || ||||||||||       |||           
T  24556024 ccattggatgggtcttaactatttaagacccgttacctattaggtacccctaatggggagaatctttttcagggtcttataag-------gtc------- 24555939  T
Q  537 agacccccacttttaagcaggacccgcacttttttaatattaa-aaaattgaaa-ataatgatataaaattattgatagt 614  Q
         ||||||||||||| ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  24555938 -----cccacttttaagcgggacccgcactcttttaatattaaaaaaattgaaatataatgatataaaattattgatagt 24555864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 563 - 714
Target Start/End: Complemental strand, 32851892 - 32851740
Alignment:
Q  563 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattgga 661  Q
    |||| ||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||  || ||||||||||||| ||| | ||||||   ||||    
T  32851892 cactcttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtgtgtcccatttaagaacttcgtgggagatctgggatgga 32851793  T
Q  662 gtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |  ||| | |||||||||| |||| ||||||||||||| ||||| | ||||||    
T  32851792 ggaattgattgcttattagatactactattaaaaaattgtaaatgagtgatgt 32851740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 532 - 694
Target Start/End: Complemental strand, 44665480 - 44665316
Alignment:
Q  532 acttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctca 630  Q
    ||||||||||| || | ||||||  ||| |  ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| || |||    
T  44665480 acttaagacccacaatcttaagcgagactcatactcttttaatattaaaaaattgaaatataatgatataaaattattgatagttgattagtgtatttca 44665381  T
Q  631 tttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaa 694  Q
    |||||||  ||||| || ||| ||| ||||||| |||| ||| |||||||| || | ||||||||    
T  44665380 tttaagagatttgtatgagatactggattggagcgattgagtacttattagatattactattaaa 44665316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 563 - 705
Target Start/End: Complemental strand, 11241612 - 11241468
Alignment:
Q  563 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtga-tctgaattgg 660  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||||  | ||||| || ||||||||  | | || |||||    
T  11241612 cacttttttaatattataaaattgaaatataatgatataaagttattgatagttgattagtggataccttttaaaaaatttgtgtgaaattatggattgg 11241513  T
Q  661 agtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    ||  |||  ||| |||||| |||||  ||||||||||||||||||    
T  11241512 aggaattgggtgtttattatgtactaatattaaaaaattataaat 11241468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 567 - 705
Target Start/End: Original strand, 51263185 - 51263323
Alignment:
Q  567 tttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg-tgatctgaattggagtg 664  Q
    ||||||||||||||||||| ||| ||||||| ||||| ||||||||||||| ||||||  | ||||||||||| |||||| | ||  |||||||| | ||    
T  51263185 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtttcatttaagaaatttgtgagatg--ctgaattgaaatg 51263282  T
Q  665 atttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    ||| |||||| ||||||||||  |||| |||| ||||||||    
T  51263283 attgagtgctcattaggtactattattgaaaatttataaat 51263323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 660 - 749
Target Start/End: Original strand, 38902053 - 38902146
Alignment:
Q  660 gagtgatttagtgcttattaggtactgctattaaaaaattataaataaatg--atgttca--tgagacccatttaagaaccaaaaaatgagtgt 749  Q
    |||||||  ||||||||||||||||| ||||||||||||||||||| | ||  |||| ||  ||||||||||||||||||| ||||||||||||    
T  38902053 gagtgatcgagtgcttattaggtactactattaaaaaattataaatgagtgatatgtacacgtgagacccatttaagaacccaaaaatgagtgt 38902146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 501 - 704
Target Start/End: Complemental strand, 49003558 - 49003354
Alignment:
Q  501 tttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatat 599  Q
    |||||||  ||| |||||||||  |||||||||||||||| |||| | ||||    ||||  ||| ||||||||||||||||||||  |  ||||  |||    
T  49003558 tttttgaaggtcctataagactcagggtcttacttaagactcccaatcttaaatgagacca-cacctttttaatattaaaaaattgttatgtaattgtat 49003460  T
Q  600 aaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaat 698  Q
    ||| ||||||||||||| || |||| ||| ||||||||| |||||||| ||| ||   |||||| |||| | | ||||||||||| | ||||||||||||    
T  49003459 aaagttattgatagttgatttgtgggtctaatttaagaattttgtgtgagatgctcggttggagagattgaatacttattaggtattactattaaaaaat 49003360  T
Q  699 tataaa 704  Q
    ||||||    
T  49003359 tataaa 49003354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 567 - 744
Target Start/End: Complemental strand, 51504663 - 51504479
Alignment:
Q  567 tttttaatattaaaaaattgaaaa--taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagt 663  Q
    ||||||||||||||||||||||||  |  ||||||||||||||| ||||||| | ||||| ||  |||||||||  ||||||| |||  ||  ||||||     
T  51504663 tttttaatattaaaaaattgaaaatgttgtgatataaaattattaatagttgataagtgggtcctatttaagaaacttgtgtgggatgatgggttggagg 51504564  T
Q  664 gatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt----tcatgagacccatttaagaaccaaaaaatg 744  Q
     ||| ||| |||| || ||||| ||||||||||||||||||| | ||||||     | ||||||||||||||| ||||| |||||    
T  51504563 aattgagtacttaatacgtactactattaaaaaattataaatgagtgatgtatacacgtgagacccatttaagcaccaacaaatg 51504479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 494 - 647
Target Start/End: Complemental strand, 11570114 - 11569965
Alignment:
Q  494 gagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-ta 592  Q
    ||||| ||||||  ||||||||||||||| | | |||||||||||||||||| | ||||    |||||  |||||||  |||||||||||||||||  ||    
T  11570114 gagaaacttttttggagtcttataagactcgtg-tcttacttaagacccccaatcttaaatgagaccc--acttttt--atattaaaaaattgaaatgta 11570020  T
Q  593 atgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 647  Q
    |||||||||| ||||||||||||| ||| |   |||||||| |||| ||||||||    
T  11570019 atgatataaagttattgatagttgattaataagtctcatttgagaaatttgtgtg 11569965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 656 - 704
Target Start/End: Original strand, 42401085 - 42401133
Alignment:
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaattataaa 704  Q
    |||||||||| | |||||||||||||||||| |||||||||||||||||    
T  42401085 attggagtgactgagtgcttattaggtactgttattaaaaaattataaa 42401133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 564 - 646
Target Start/End: Complemental strand, 51061753 - 51061670
Alignment:
Q  564 acttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 646  Q
    |||||||||| |||||||||||||||  |||||||| ||| ||||||||||| | |||| || || |||||||||| |||||||    
T  51061753 acttttttaaaattaaaaaattgaaatgtaatgatagaaagttattgatagtagattagcgggtcccatttaagaaatttgtgt 51061670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 655 - 704
Target Start/End: Complemental strand, 37583091 - 37583042
Alignment:
Q  655 aattggagtgatttagtgcttattaggtactgctattaaaaaattataaa 704  Q
    ||||||||||| | ||||||||||||||| || |||||||||||||||||    
T  37583091 aattggagtgactaagtgcttattaggtattgttattaaaaaattataaa 37583042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 447 - 516
Target Start/End: Original strand, 42831537 - 42831606
Alignment:
Q  447 ggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttat 516  Q
    ||||||||  |||||||||||||||||||||||||||  ||| |||  ||||||||||| ||| ||||||    
T  42831537 ggtcttaatcatttaagactcggtacctattaggtactctcattgggaagaatctttttcagactcttat 42831606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 563 - 622
Target Start/End: Complemental strand, 31133225 - 31133165
Alignment:
Q  563 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagt 622  Q
    |||||||||||||||||| |||| |||  ||||||||| |||||||||||||||| |||||    
T  31133225 cacttttttaatattaaataatttaaatgtaatgatatgaaattattgatagttgattagt 31133165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 656 - 700
Target Start/End: Original strand, 31827237 - 31827281
Alignment:
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaatta 700  Q
    |||| |||||| ||||||||||||||||||| |||||||||||||    
T  31827237 attgaagtgatctagtgcttattaggtactgttattaaaaaatta 31827281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 656 - 704
Target Start/End: Complemental strand, 42483745 - 42483697
Alignment:
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaattataaa 704  Q
    |||||| ||||| |||||||||||| ||||| |||||||||||||||||    
T  42483745 attggaatgattgagtgcttattagatactgttattaaaaaattataaa 42483697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 510 - 705
Target Start/End: Original strand, 47364269 - 47364457
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa--taatgatataaaattat 607  Q
    ||||||||||||| ||||||||| ||||||| |||| |||||||  |||  | |||| |||||||||||||| | | ||||  |||||||||||          
T  47364269 gtcttataagactcggggtcttatttaagactcccaattttaagtgggattcacactattttaatattaaaacaattaaaatgtaatgatataa------ 47364362  T
Q  608 tgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
        ||||| ||||||  ||||||||||||| |||||||| ||| || | ||| ||||||| |||  ||||||  |||| ||||| |||||||||||||    
T  47364363 ----agttgattagtgtgtctcatttaagaaatttgtgtgagatgctcagttgaagtgattaagtatttattatatactactatttaaaaattataaat 47364457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 3623176 - 3623108
Alignment:
Q  563 cacttttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaa 635  Q
    ||||||||||||||||||||| |    |||||||| |||| ||||||||||||| |||||  |||||||||||    
T  3623176 cacttttttaatattaaaaaaat----ataatgatctaaagttattgatagttgattagtaaatctcatttaa 3623108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 532 - 638
Target Start/End: Complemental strand, 9505647 - 9505540
Alignment:
Q  532 acttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattga-aaataatgatataaaattattgatagttgtttagtggatctca 630  Q
    ||||||||||| |  | |||||  |||||| ||| ||||||||||||||||||| | |  |||| ||||||| ||||||||||||| ||||| | ||||     
T  9505647 acttaagaccctctttcttaagtgggacccacacctttttaatattaaaaaatttatatgtaataatataaagttattgatagttgattagtaggtctcg 9505548  T
Q  631 tttaagaa 638  Q
    ||||||||    
T  9505547 tttaagaa 9505540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 704
Target Start/End: Original strand, 20558608 - 20558643
Alignment:
Q  669 agtgcttattaggtactgctattaaaaaattataaa 704  Q
    |||||||||||||||||| |||||||||||||||||    
T  20558608 agtgcttattaggtactgttattaaaaaattataaa 20558643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 615
Target Start/End: Complemental strand, 43675368 - 43675277
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattga-aaataatgatataaaattattgatagtt 615  Q
    |||||||||||||||||| || |||||||  | || |||| |||||||||||| ||||||||| |   ||||||||||| || |||||||||    
T  43675368 gggtcttacttaagaccctcaattttaagtggaactcgcatttttttaatattgaaaaattgatatgcaatgatataaagttgttgatagtt 43675277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 656 - 714
Target Start/End: Complemental strand, 30627142 - 30627084
Alignment:
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||| ||| ||| |||| ||||||||  |||||||||||||||||||| ||||||    
T  30627142 attggagtcattaagtccttaataggtacttttattaaaaaattataaataagtgatgt 30627084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 656 - 714
Target Start/End: Original strand, 32913943 - 32914001
Alignment:
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||||||| ||| | |||||| ||||  ||||||||||||||||| |||||||||    
T  32913943 attggagtgattgagtacctattagatactattattaaaaaattataaaaaaatgatgt 32914001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 674 - 715
Target Start/End: Complemental strand, 23655202 - 23655161
Alignment:
Q  674 ttattaggtactgctattaaaaaattataaataaatgatgtt 715  Q
    |||||| |||||  ||||||||||||||||||||||||||||    
T  23655202 ttattaagtactattattaaaaaattataaataaatgatgtt 23655161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 669 - 714
Target Start/End: Original strand, 37073763 - 37073808
Alignment:
Q  669 agtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||| ||||||| ||||  |||||||||||||||||||||||||||    
T  37073763 agtgtttattagatactagtattaaaaaattataaataaatgatgt 37073808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 3e-60; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 487 - 749
Target Start/End: Complemental strand, 32658633 - 32658367
Alignment:
Q  487 caatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattg 586  Q
    |||||| |||||||||||  ||  ||||| |||||| |||||||||||| |||| || |||||||||| |||||| |||| ||||||||||||||||||     
T  32658633 caatggggagaatcttttacagtatcttaaaagacttggggtcttacttcagactcc-acttttaagcgggacccacactcttttaatattaaaaaatta 32658535  T
Q  587 aaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtact 685  Q
    ||| ||| ||||||||| ||||||||||||| |||||||||  ||||||||||||||||||| ||| ||  |||||||||||||||| ||||||||||||    
T  32658534 aaatatactgatataaagttattgatagttgattagtggattccatttaagaactttgtgtgagatatgggttggagtgatttagtgtttattaggtact 32658435  T
Q  686 gctattaaaaaattataaataaatgatgt----tcatgagacccatttaagaaccaaaaaatgagtgt 749  Q
     ||||||||||||||||||| | ||||||     | ||||||||||||||||||| ||||||||||||    
T  32658434 actattaaaaaattataaatgagtgatgtgtccacgtgagacccatttaagaacctaaaaatgagtgt 32658367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 437 - 714
Target Start/End: Complemental strand, 5002627 - 5002349
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||| |||||||||||||||||||  ||||||||||||||||||  |||||  |||||||||||  |||||| |||||||   ||||||||| | |    
T  5002627 ccattggaagggtcttaactatttaagatccggtacctattaggtaccc-caatgaggagaatcttttacagagtcctataagatatggggtcttattaa 5002529  T
Q  537 agacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaa 635  Q
    ||||||| ||||| |||| ||||||||||| |||||||||| ||||||||||| ||||| ||||||| ||||||||||||| ||||||| || |||||||    
T  5002528 agacccc-actttgaagcgggacccgcactcttttaatatttaaaaattgaaatataataatataaagttattgatagttgattagtgggtcccatttaa 5002430  T
Q  636 gaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgct--attaaaaaattataaataaatgatgt 714  Q
    |||||||||||| |||||   ||||||||||| |||||||||||| |||| ||  |  |||||||||||||||| ||||||    
T  5002429 gaactttgtgtgagatctcggttggagtgattgagtgcttattagatactactacaaaaaaaaattataaataagtgatgt 5002349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 525 - 699
Target Start/End: Complemental strand, 22281938 - 22281763
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtg 623  Q
    |||||||||||||||||||||||||||||  | ||||||||| ||||||| |||||||||||||| ||||||||||||| |||||||| |||| ||||||    
T  22281938 gggtcttacttaagacccccacttttaagtggcacccgcactcttttaatgttaaaaaattgaaatataatgatataaagttattgatggttgattagtg 22281839  T
Q  624 gatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaatt 699  Q
     ||| ||||||||||||||||| | ||||    ||||||||||| ||||||||||||||||| |||||||||||||    
T  22281838 aatcccatttaagaactttgtgggagatcaaggttggagtgattgagtgcttattaggtactactattaaaaaatt 22281763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 556 - 697
Target Start/End: Complemental strand, 32977512 - 32977370
Alignment:
Q  556 ggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctg 654  Q
    ||||| ||||| ||||||| ||||||||||||||  || || |||||| ||||||||||||| ||||||| || ||||||||||||||||||| ||||||    
T  32977512 ggacctgcactcttttaatgttaaaaaattgaaatgtagtggtataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagatctg 32977413  T
Q  655 aattggagtgatttagtgcttattaggtactgctattaaaaaa 697  Q
      |||||| |||| ||||||||||||||||| |||||||||||    
T  32977412 ggttggagggattgagtgcttattaggtactactattaaaaaa 32977370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 599 - 744
Target Start/End: Original strand, 33755768 - 33755917
Alignment:
Q  599 taaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaat 698  Q
    |||| ||||||||||||| ||||||||| ||||||||||| |||||||| ||| ||  ||||||||||| | | ||||||||||||| ||||||||||||    
T  33755768 taaagttattgatagttgattagtggatttcatttaagaattttgtgtgagatttgtgttggagtgattgaatacttattaggtactactattaaaaaat 33755867  T
Q  699 tataaataaatgatgt----tcatgagacccatttaagaaccaaaaaatg 744  Q
     |||||||| | ||||     | |||||||||||||||||||||| ||||    
T  33755868 aataaataagtaatgtatacacttgagacccatttaagaaccaaagaatg 33755917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 474 - 685
Target Start/End: Complemental strand, 21941153 - 21940941
Alignment:
Q  474 tattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaa 573  Q
    |||||||||||| || ||| |||||| ||||| || ||||||||||| |     ||||| |||||||| |||  ||||||| |||||||  || ||||||    
T  21941153 tattaggtacctccattggtgagaatttttttcagggtcttataagattccaaatcttatttaagacctccaactttaagcgggacccgtgctcttttaa 21941054  T
Q  574 tattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtg 672  Q
    |||||||||||||||| ||| | | ||||| ||||||||||||  |||||||  | |||||||||  |||||||| ||| ||  |||||| |||| ||||    
T  21941053 tattaaaaaattgaaatatagtaacataaagttattgatagtttattagtgggacccatttaagacttttgtgtgagatatgggttggagggattgagtg 21940954  T
Q  673 cttattaggtact 685  Q
     ||||||||||||    
T  21940953 tttattaggtact 21940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 525 - 714
Target Start/End: Complemental strand, 7694094 - 7693903
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtg 623  Q
    |||||| ||||||||||  || | |||||  |||||  |||||||||||||||||||||||||||  || |||||| || ||||||||||||| ||||||    
T  7694094 gggtctcacttaagaccttcaatcttaagagggacctacacttttttaatattaaaaaattgaaatgtattgatatgaagttattgatagttgattagtg 7693995  T
Q  624 gatctcatttaagaactttgtgtgtga-tctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    | |  ||||||| || |||||||| || | ||  |||||| |||| ||| |||||||||||||  || ||||||||||||||| | ||||||    
T  7693994 ggttccatttaaaaaatttgtgtgagattatgggttggagggattgagtacttattaggtactattactaaaaaattataaatgagtgatgt 7693903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 441 - 571
Target Start/End: Complemental strand, 31103660 - 31103531
Alignment:
Q  441 tggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagac 540  Q
    |||| |||||||||| ||||||||| || || ||||||||||| || | |||||||||||||||| | ||||||||||||   | | |||||||||| ||    
T  31103660 tggaagggtcttaaccatttaagacccgttatctattaggtacttt-attggagagaatcttttttaaagtcttataagatccgtgatcttacttaacac 31103562  T
Q  541 ccccacttttaagcaggacccgcactttttt 571  Q
    | |||||||||||| |||||| |||||||||    
T  31103561 ctccacttttaagcgggaccctcactttttt 31103531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 467 - 622
Target Start/End: Original strand, 25098971 - 25099128
Alignment:
Q  467 cggtacctattaggtaccttcaatggagagaatctttttg-agagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcac 565  Q
    ||||| |||||| ||||| ||| | ||||||| ||||||  || ||||| ||||||| | || || |||||||| | ||| | | |||  |||||  |||    
T  25098971 cggtatctattaagtaccctcattagagagaaactttttttagggtcttttaagactcgaggactcacttaagatctccaatctcaagtgggaccaacac 25099070  T
Q  566 ttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagt 622  Q
    || ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  25099071 ttgtttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagt 25099128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 566 - 647
Target Start/End: Original strand, 387718 - 387801
Alignment:
Q  566 ttttttaatattaaaaaattgaaaata--atgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 647  Q
    ||||| |||||||||||||| ||||||  || ||||||| ||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  387718 tttttaaatattaaaaaattaaaaatataataatataaagttattgatagttgattagtgggtcttatttaagaaatttgtgtg 387801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 563 - 635
Target Start/End: Original strand, 6988167 - 6988240
Alignment:
Q  563 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaa 635  Q
    |||| |||||||||||||||||| |||  | |||||||||||||||||||||||||||||| | | ||||||||    
T  6988167 cactcttttaatattaaaaaattaaaatgtgatgatataaaattattgatagttgtttagtaggtttcatttaa 6988240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 570 - 624
Target Start/End: Complemental strand, 31103498 - 31103444
Alignment:
Q  570 ttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtgg 624  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||  |||||||    
T  31103498 ttaatattaaaaaattgatattaatgatataaaattatttatagttaattagtgg 31103444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 566 - 622
Target Start/End: Complemental strand, 18804306 - 18804249
Alignment:
Q  566 ttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagt 622  Q
    |||||||||||||| |||||||||  |||| ||||||||||||||||||||| |||||    
T  18804306 ttttttaatattaataaattgaaatgtaataatataaaattattgatagttgattagt 18804249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 448 - 560
Target Start/End: Complemental strand, 7269902 - 7269790
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||| ||||||||  || || |||||||||| ||||| ||| || | | ||||| ||| ||| ||||||   ||||||||| ||||||||||||||    
T  7269902 gtcttaaccatttaagatccgatatctattaggtatcttcattggggaaattttttttcagaatctcataagatccggggtcttatttaagacccccact 7269803  T
Q  548 tttaagcaggacc 560  Q
    || |||| |||||    
T  7269802 ttaaagcgggacc 7269790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 614
Target Start/End: Complemental strand, 9491895 - 9491836
Alignment:
Q  556 ggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagt 614  Q
    |||||| || |||||||||||||||||||| |||  |||||||||||| |||||||||||    
T  9491895 ggacccacatttttttaatattaaaaaattaaaatgtaatgatataaagttattgatagt 9491836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 571 - 613
Target Start/End: Complemental strand, 32730592 - 32730548
Alignment:
Q  571 taatattaaaaaattgaaaa--taatgatataaaattattgatag 613  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||    
T  32730592 taatattaaaaaattgaaaaattaatgatatagaattattgatag 32730548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 2e-58; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 437 - 705
Target Start/End: Complemental strand, 6711131 - 6710861
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||  |||||||||||||| |||||  |||| |||||||||||||||||||| |||||| ||||| |  |||||||||||||  |||| |||||||    
T  6711131 ccattgggagggtcttaactattcaagacatggtatctattaggtaccttcaatggggagaatatttttcaatgtcttataagactcagggttttactta 6711032  T
Q  537 agacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa--taatgatataaaattattgatagttgtttagtggatctcattta 634  Q
    |||||||||||||||| | | ||| |||||||| ||||||||||||| | ||||  |||||||||||| ||||||||||||| ||| | |||   |||||    
T  6711031 agacccccacttttaaacggaacctgcacttttataatattaaaaaaattaaaatgtaatgatataaagttattgatagttgattaattgattctattta 6710932  T
Q  635 agaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    ||||||||||||| |||||   ||||||||| | |||||||||||| |||| |||||||||||||||||||    
T  6710931 agaactttgtgtgagatctaggttggagtgactgagtgcttattagatactactattaaaaaattataaat 6710861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 480 - 713
Target Start/End: Original strand, 9583050 - 9583284
Alignment:
Q  480 gtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaa 579  Q
    ||||||||||||| |||||| ||||| |||||||||||||||  | |||||||||||||| || |||||| |||| ||| ||||||| |||||||  |||    
T  9583050 gtaccttcaatggggagaatattttttagagtcttataagacctgaggtcttacttaagatcctcactttaaagcgggatccgcactcttttaatgataa 9583149  T
Q  580 aaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttatt 678  Q
    |||||||||| |||||||| |||| ||||||| | ||| ||||||| ||  |||||||||||||||||| ||||||| || |||||||| ||||||||||    
T  9583150 aaaattgaaatataatgatgtaaagttattgacaattgattagtgggtccaatttaagaactttgtgtgagatctgagtttgagtgattgagtgcttatt 9583249  T
Q  679 aggtactgctattaaaaaattataaataaatgatg 713  Q
    || |||| ||||||||||||||||||||| |||||    
T  9583250 agatactactattaaaaaattataaataagtgatg 9583284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 446 - 705
Target Start/End: Original strand, 11921818 - 11922078
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||  ||||||||| || |||||||||||||||| || ||| ||||| |||||| || ||||||||||||  ||||||||||||||||||||||    
T  11921818 gggtcttaaacatttaagacccgatacctattaggtacctccattggggagaaacttttttagggtcttataagacccggggtcttacttaagaccccca 11921917  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaatt-gaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
     | |||||| |||| | |||  |||||||||||||||||| |||  |||||||||||| |||||| |||||| ||||| | || |||||||||| |||||    
T  11921918 atcttaagcgggactcacacacttttaatattaaaaaattagaatctaatgatataaagttattggtagttgattagtaggtcccatttaagaaatttgt 11922017  T
Q  645 gtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    ||| ||| ||  ||||||  ||| ||||||| ||||||||| |||||||||||||||||||    
T  11922018 gtgagatttgggttggaggaattgagtgctttttaggtactactattaaaaaattataaat 11922078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 473 - 749
Target Start/End: Complemental strand, 14773147 - 14772867
Alignment:
Q  473 ctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcactttttta 572  Q
    |||||||||| ||||| ||||| |||| ||||| | |||||||||||| |   ||||||| ||||||||| ||  ||||||| || || |||| ||||||    
T  14773147 ctattaggtatcttcattggagtgaatttttttcaaagtcttataagaattatggtcttatttaagaccctcaactttaagcggggcctgcacgttttta 14773048  T
Q  573 atattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtg 672  Q
    |||||||||||||||||   |   |||||| ||||||||||||| ||| ||  || ||||||||||||||||||| ||||||  ||||||  ||| |||     
T  14773047 atattaaaaaattgaaatgcagtgtataaagttattgatagttgattaatgagtcccatttaagaactttgtgtgagatctgtgttggaggaattgagta 14772948  T
Q  673 cttattaggtactgctattaaaaaattataaataaatgatgt----tcatgagacccatttaagaaccaaaaaatgagtgt 749  Q
    |||||||||||||  | |||||||||||||||| ||||||||     | ||||||||||||||||||  ||||||| ||||    
T  14772947 cttattaggtactattgttaaaaaattataaatgaatgatgtgtacgcgtgagacccatttaagaactcaaaaatgggtgt 14772867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 457 - 644
Target Start/End: Complemental strand, 44887479 - 44887291
Alignment:
Q  457 atttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcag 556  Q
    |||||||||||||||| ||||||||||||||| | ||||||| ||||||  |  |||||||||||  | ||||| |||| |||||  || ||||||||||    
T  44887479 atttaagactcggtacttattaggtaccttcattagagagaaactttttcgggatcttataagacatgtggtctcacttgagacctacaattttaagcag 44887380  T
Q  557 gacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
    ||  |  | | |||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||| || |||||    
T  44887379 gattcaaattcttttaatattaaaaaattgaaatataatgatataaatttattgatagttgattattggatctcatttaaaaaatttgt 44887291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 446 - 646
Target Start/End: Original strand, 40999552 - 40999753
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||  |||||||| |||||| ||||| |||||||||| |||  |||| |||||| || ||||||||| | |  |||||| ||||||||||| ||    
T  40999552 gggtcttaaacatttaagattcggtatctatttggtaccttcattgggaagaaactttttcagggtcttataaaatttagggtctcacttaagaccctca 40999651  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
     | |||||  |||||| ||||| ||||||||||||| ||||||| ||||||||||||| |||||||| |||| ||||||| |  |||||||||| |||||    
T  40999652 atcttaagtgggacccacacttgtttaatattaaaagattgaaatataatgatataaagttattgatggttgattagtgggttccatttaagaaatttgt 40999751  T
Q  645 gt 646  Q
    ||    
T  40999752 gt 40999753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 448 - 714
Target Start/End: Original strand, 26312349 - 26312614
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||  ||||||||| || ||||||||||||||   || | | ||||| |||||   |||||||||||||    | ||||||||||||||||||| |    
T  26312349 gtcttaaacatttaagacccgatacctattaggtactcccattagggagaaacttttccggagtcttataagaacctgagtcttacttaagacccccaat 26312448  T
Q  548 tttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 646  Q
     |||||| ||  || |||| || |||||||||||||| ||||  |||||| ||||| |||||| |||||| ||||||| |   |||||| || |||||||    
T  26312449 cttaagcggg--ccacactcttctaatattaaaaaatagaaatgtaatgacataaagttattggtagttgattagtgggttctatttaataaatttgtgt 26312546  T
Q  647 gtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    | ||||||| ||||||  ||| ||||||||||||||||| ||||||||||||||||||| | ||||||    
T  26312547 gagatctgagttggaggaattgagtgcttattaggtactactattaaaaaattataaatgagtgatgt 26312614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 448 - 714
Target Start/End: Original strand, 34374926 - 34375191
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccc-ac 546  Q
    |||||||| |||||||| |||||||||||||||||||  ||  ||| ||||||||||| || ||||||||||||  | ||||||||||||||||||| |     
T  34374926 gtcttaaccatttaagattcggtacctattaggtacccccatggga-agaatctttttcagggtcttataagacctgaggtcttacttaagacccccaaa 34375024  T
Q  547 ttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtg 645  Q
    |  ||||  | | |  ||||||||||||||| |||||||||||  |||| ||||||| ||||||||||||| ||| ||| || |||||||||  ||| |     
T  34375025 tcataagtggaatcatcacttttttaatatt-aaaaattgaaatgtaataatataaagttattgatagttgattaatgggtcccatttaaga--tttttt 34375121  T
Q  646 tgtgatctga-attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    || ||||| |  |||||| |||| | | ||||||||||||| ||||||||||||||||||||| ||||||    
T  34375122 tgagatcttaggttggagggattgaattcttattaggtactactattaaaaaattataaataagtgatgt 34375191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 448 - 714
Target Start/End: Complemental strand, 41069036 - 41068777
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    ||||||| ||| ||||||  ||||||||||||| ||   || ||||||||| ||||||  |||||||||||||||  |||||| ||||||||| | || |    
T  41069036 gtcttaaatatataagacatggtacctattaggaactcccattggagagaaacttttttggagtcttataagactcagggtctcacttaagactctcaat 41068937  T
Q  548 tttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttg-tttagtggatctcatttaagaactttgtg 645  Q
    ||||||  |||||| ||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||| || ||||||    
T  41068936 tttaagtgggacccacactttttt-ata-taaaaaattgaaatataatgatataaagttattgatagttgatttagtgg-tctcatttaaaaattttgtg 41068840  T
Q  646 tgtgatctgaattggagtgatttagtgctta-ttaggtactgctattaaaaaattataaataaatgatgt 714  Q
    || ||   ||    || ||||| |||||||| ||| ||||| ||||| ||||||||||||| ||||||||    
T  41068839 tgaga---ga----gaatgattgagtgcttatttaagtactactatttaaaaattataaatgaatgatgt 41068777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 451 - 647
Target Start/End: Complemental strand, 36887814 - 36887617
Alignment:
Q  451 ttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccactttt 550  Q
    ||||| ||||||||  || |||||||||||||| |  | ||| ||||||  |||| |  |||||||||||   ||||| |||||||||| |   ||||||    
T  36887814 ttaaccatttaagatccgatacctattaggtacttctattggggagaattattttcaaggtcttataagatcgggggttttacttaagatcttaactttt 36887715  T
Q  551 aagcaggacccgcacttttttaatattaaaaaattgaaaat-aatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 647  Q
    || | |||||| |||| ||||||||||||||||||||||   ||||||||||| ||||||||||||| ||||||||||||||||||||| ||| ||||    
T  36887714 aaacgggaccctcactcttttaatattaaaaaattgaaatgcaatgatataaatttattgatagttgattagtggatctcatttaagaattttttgtg 36887617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 527 - 665
Target Start/End: Original strand, 45135717 - 45135855
Alignment:
Q  527 gtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtgga 625  Q
    ||||||||||||||| ||||||||||||  |||||||||| ||||||||||||| || ||||| ||||||||||||| ||||||||||||| || ||||     
T  45135717 gtcttacttaagacctccacttttaagcgagacccgcactcttttaatattaaataactgaaatataatgatataaagttattgatagttgatttgtggg 45135816  T
Q  626 tctcatttaagaactttgtgtgtgatctgaattggagtga 665  Q
    || ||||||| |||||||| ||  |||||  |||||||||    
T  45135817 tc-catttaaaaactttgtatgatatctgggttggagtga 45135855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 567 - 704
Target Start/End: Complemental strand, 65522 - 65383
Alignment:
Q  567 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtg 664  Q
    |||||||||| ||||||||||||  |||||||| ||| ||||||||||||| ||| ||| |||||||||| || |||||||| |||  || ||||||| |    
T  65522 tttttaatataaaaaaattgaaatgtaatgatacaaacttattgatagttgattaatggttctcatttaataaatttgtgtgagatgttggattggaggg 65423  T
Q  665 atttagtgcttattaggtactgctattaaaaaattataaa 704  Q
    ||| |||| |||||| ||||| | ||||||||||||||||    
T  65422 attaagtgtttattatgtactacaattaaaaaattataaa 65383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 447 - 615
Target Start/End: Original strand, 30465136 - 30465306
Alignment:
Q  447 ggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccac 546  Q
    ||||||||||||||||||||| |||  ||||||||| ||||| ||  |||||||||||| |  || |||||||||  | |||||||||||| | |  |||    
T  30465136 ggtcttaactatttaagactcagtatttattaggtatcttcattgtggagaatctttttcaaggttttataagacccgaggtcttacttaataacttcac 30465235  T
Q  547 ttttaagcaggacccgcacttttttaatattaaaaaattgaaaat--aatgatataaaattattgatagtt 615  Q
    |||||||| | |||| |||| ||||||||||||||||||  ||||  | | ||||||| ||||||||||||    
T  30465236 ttttaagcggtacccccactcttttaatattaaaaaatttgaaattgagtaatataaagttattgatagtt 30465306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 556 - 710
Target Start/End: Complemental strand, 32887742 - 32887588
Alignment:
Q  556 ggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctg 654  Q
    |||||| |||| |||||||||||||||||| |||  |||| ||||||| ||||| ||||||| ||||||||| | |||||| || ||| ||||  |||||    
T  32887742 ggacccacactcttttaatattaaaaaattaaaatgtaataatataaagttatttatagttgattagtggattt-atttaaaaaatttatgtgatatctg 32887644  T
Q  655 aattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatg 710  Q
     ||||||| |||| | ||||||||||| ||  ||||||||||||||||||| ||||    
T  32887643 gattggagagattgaatgcttattaggcaccactattaaaaaattataaatgaatg 32887588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 511 - 742
Target Start/End: Original strand, 5038651 - 5038891
Alignment:
Q  511 tcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattg 609  Q
    |||||||||||  ||||||| |||||||| | | | | |||||| |||| | || | |||||||||||||||||| ||| ||||| ||||||||||||||    
T  5038651 tcttataagacatggggtctcacttaagatctcaa-tcttaagcgggacacacaatattttaatattaaaaaattaaaatataataatataaaattattg 5038749  T
Q  610 atagttgtttagtggat--ctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaata 706  Q
    ||||||| ||||||| |  | || ||||||| |||||||| ||| | |  |||||| |||| | |||||||||  ||||  |||||||||||||||||||    
T  5038750 atagttgattagtgggtcacacaattaagaaatttgtgtgagatgccgggttggagagattgaatgcttattaattactattattaaaaaattataaata 5038849  T
Q  707 aatga--tgttcatg----agacccatttaagaaccaaaaaa 742  Q
    |||||  ||||||||     |||||||||||| |||||||||    
T  5038850 aatgaggtgttcatgtagacgacccatttaagtaccaaaaaa 5038891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 494 - 635
Target Start/End: Original strand, 39368657 - 39368798
Alignment:
Q  494 gagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ata 592  Q
    |||||||||||| || ||||||||||||  |  |||||| |||||||||| |||||||| | |||||| | ||||||||||||| |||||||||||  ||    
T  39368657 gagaatctttttcagggtcttataagacccgaagtcttatttaagacccc-acttttaaacgggaccctcccttttttaatattcaaaaattgaaatgta 39368755  T
Q  593 atgatataaaattattgatagttgtttagtggatctcatttaa 635  Q
    |  ||||||||||||||||||||| ||| |||||  |||||||    
T  39368756 aaaatataaaattattgatagttgattaatggattccatttaa 39368798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 566 - 705
Target Start/End: Original strand, 3668832 - 3668973
Alignment:
Q  566 ttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagt 663  Q
    |||| ||||||||||||||| |||  ||||||||||||||||| |||||||  ||||||| ||| ||||||||| ||||||||  ||  ||| |||||      
T  3668832 ttttgtaatattaaaaaattaaaacgtaatgatataaaattatcgatagttaattagtggttcttatttaagaaatttgtgtgatatattgagttggacg 3668931  T
Q  664 gatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    |||| ||| |||||||  |||| |||||||||||||||||||    
T  3668932 gattgagtacttattaattactactattaaaaaattataaat 3668973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 563 - 644
Target Start/End: Original strand, 6459070 - 6459152
Alignment:
Q  563 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| |||||   ||||||||| ||| |||||    
T  6459070 cacttttttaatattaaaaaattaaaatataatgatagaaaattattgatagttgattagtaagtctcatttacgaaatttgt 6459152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 510 - 705
Target Start/End: Complemental strand, 16118099 - 16117901
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccactt-ttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattat 607  Q
    ||||||||||||   | |||| ||||||||||||||  | |||||  |||| ||||| |||||||||||||||||| |  | ||||||||||||| ||||    
T  16118099 gtcttataagacctagtgtctcacttaagacccccaaatcttaagtgggactcgcacctttttaatattaaaaaatggttatataatgatataaagttat 16118000  T
Q  608 tgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    ||||||||| || ||||||  |||||| | | | |||||| ||| |    ||||||  ||| ||||||||||||||| || ||||||||||||||||||    
T  16117999 tgatagttgatttgtggataccatttatggaatatgtgtgagatgcatggttggaggaattgagtgcttattaggtattgatattaaaaaattataaat 16117901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 567 - 644
Target Start/End: Original strand, 34234879 - 34234957
Alignment:
Q  567 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||| ||| ||||||| ||| |||||| || |||||    
T  34234879 tttttaatattaaaaaattgaaatgtaatgatataaagttattgataattgattagtgggtctaatttaataaatttgt 34234957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 569 - 647
Target Start/End: Original strand, 26297112 - 26297191
Alignment:
Q  569 tttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 647  Q
    |||||||||||||||||||||  |  ||||||||| ||||||||||||| |||  ||||| |||||||||||||| ||||    
T  26297112 tttaatattaaaaaattgaaatgtggtgatataaagttattgatagttgattatcggatcccatttaagaactttatgtg 26297191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 566 - 623
Target Start/End: Complemental strand, 13022854 - 13022796
Alignment:
Q  566 ttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtg 623  Q
    ||||||||||||||||||||||||  |||| ||||||| ||||||||||||| ||||||    
T  13022854 ttttttaatattaaaaaattgaaatgtaataatataaatttattgatagttgattagtg 13022796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 447 - 714
Target Start/End: Complemental strand, 37348087 - 37347817
Alignment:
Q  447 ggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccac 546  Q
    |||||||||||||||| | |||||| ||| |||||||||||| ||  |||||   ||||| |  |||||||||| |  |||||| | |||||||| | |     
T  37348087 ggtcttaactatttaaaattcggtatctaataggtaccttcattgtggagaaatgttttggggatcttataagattcagggtctaatttaagacctcaa- 37347989  T
Q  547 ttttaagcaggacccgcacttttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 646  Q
    | |||||  |||| | ||| ||||||||| |||||| |   |  ||||| |||||| ||||||| | ||| || || | ||  |||||||||||||||||    
T  37347988 tcttaagtgggactcacacctttttaatagtaaaaattaatatgtaatggtataaagttattgacacttgatttgtaggtcatatttaagaactttgtgt 37347889  T
Q  647 gtgat----ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    | |||    |||  |||||| |||| | | |||||||| || | ||||||||||||||||||||||||||||    
T  37347888 gagatgatgctgggttggagggattgaattcttattagatattactattaaaaaattataaataaatgatgt 37347817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 449 - 483
Target Start/End: Original strand, 45135657 - 45135691
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtac 483  Q
    |||||||||||||||||||||||||||||||||||    
T  45135657 tcttaactatttaagactcggtacctattaggtac 45135691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 591 - 694
Target Start/End: Original strand, 18970016 - 18970120
Alignment:
Q  591 taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtga-tctgaattggagtgatttagtgcttattaggtactgcta 689  Q
    |||| ||||||| ||||| ||||||| ||||||  | ||||||||||| |||||||| ||  |||| ||| || |||| |||| |||||||||||| |||    
T  18970016 taattatataaagttattaatagttgattagtgagtttcatttaagaaatttgtgtgagaggctgagttgaagagattgagtgtttattaggtactacta 18970115  T
Q  690 ttaaa 694  Q
    |||||    
T  18970116 ttaaa 18970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 714
Target Start/End: Original strand, 4634045 - 4634100
Alignment:
Q  659 ggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    ||||||||| ||| |||||||||||||  ||||||||||||||| | |||||||||    
T  4634045 ggagtgattgagttcttattaggtactattattaaaaaattatacaaaaatgatgt 4634100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 615
Target Start/End: Complemental strand, 37648709 - 37648551
Alignment:
Q  457 atttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcag 556  Q
    ||||||||||||||| |||||| |||||  || | |  |||| ||||||    ||||| ||||||| | ||||| |||||||||| ||| |  |||| ||    
T  37648709 atttaagactcggtatctattaagtacccccattagtaagaaacttttttgcggtcttgtaagactcgaggtctcacttaagacctccaatcctaagtag 37648610  T
Q  557 gacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagtt 615  Q
    | ||| ||||||| |||||| ||||||||||||  | |||||||||| ||||||||||||    
T  37648609 gccccacacttttataatat-aaaaaattgaaatgtgatgatataaagttattgatagtt 37648551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 566 - 618
Target Start/End: Original strand, 6562936 - 6562988
Alignment:
Q  566 ttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtt 618  Q
    ||||||||||||||||| ||||||  |||||||||||| |||||||||||||||    
T  6562936 ttttttaatattaaaaa-ttgaaatgtaatgatataaagttattgatagttgtt 6562988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 527 - 626
Target Start/End: Original strand, 16341891 - 16341992
Alignment:
Q  527 gtcttacttaagacccccactt-ttaagcaggacccgcacttttttaatattaaaaaattg-aaaataatgatataaaattattgatagttgtttagtgg 624  Q
    |||| ||||||||||||||  | |||||  |||| ||||| ||||||||||||||||||||  |  ||| |||||||| ||||||||||||| || ||||    
T  16341891 gtctcacttaagacccccaaatcttaagtgggactcgcacctttttaatattaaaaaattgttatgtaaagatataaagttattgatagttgatttgtgg 16341990  T
Q  625 at 626  Q
    ||    
T  16341991 at 16341992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 525 - 647
Target Start/End: Original strand, 36266933 - 36267050
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtgg 624  Q
    |||||| ||||| |||||||| | |||||   ||||| |||| ||||||||||||||| ||||||    ||  ||||| |||||||||| || |||||||    
T  36266933 gggtctcacttaggacccccaatcttaagtgagacccacactattttaatattaaaaa-ttgaaa----tgtaataaagttattgatagctgattagtgg 36267027  T
Q  625 atctcatttaagaactttgtgtg 647  Q
     ||||||||||||| || |||||    
T  36267028 gtctcatttaagaaattcgtgtg 36267050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 673 - 714
Target Start/End: Original strand, 41000006 - 41000047
Alignment:
Q  673 cttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||| ||||||| |||||||| ||||||||||||||||    
T  41000006 cttattagatactgcttttaaaaaactataaataaatgatgt 41000047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 7e-58; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 495 - 749
Target Start/End: Complemental strand, 36658089 - 36657830
Alignment:
Q  495 agaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataa 593  Q
    ||||| ||||| || |||||||  |||| ||||||||||||||||||||||||||||| | | ||||||||| |||||||||||||| ||| ||| ||||    
T  36658089 agaatttttttcagggtcttatgggactcggggtcttacttaagacccccacttttaaccggaacccgcactattttaatattaaaatattaaaatataa 36657990  T
Q  594 tgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaa 693  Q
    || |||||||||||||||||||| ||||||| || ||||||||||||||||||| ||||||  ||||||||||| |||||||||||| || | |||||||    
T  36657989 tggtataaaattattgatagttgattagtgggtcccatttaagaactttgtgtgagatctgggttggagtgattgagtgcttattagatagtactattaa 36657890  T
Q  694 aaaattataaataaatgatgt----tcatgagacccatttaagaaccaaaaaatgagtgt 749  Q
    |||||||||||| |   ||||     ||||||||||||||||||||| ||||||| ||||    
T  36657889 aaaattataaatgagcaatgtgtacacatgagacccatttaagaacccaaaaatgggtgt 36657830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 449 - 705
Target Start/End: Complemental strand, 43302366 - 43302108
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccc--ac 546  Q
    |||||||||||||||||   ||| ||||||||||||| ||| || |||||  ||||| |  ||||||||||||  |||||||||||||||||||||  ||    
T  43302366 tcttaactatttaagacctagtaactattaggtacctccaaggg-gagaacttttttcaaggtcttataagacctggggtcttacttaagacccccctac 43302268  T
Q  547 ttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtg 645  Q
    |||||||| ||| || |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| || |||||||||| | ||||    
T  43302267 ttttaagcgggatccacactcttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtgggtcccatttaagaattatgtg 43302168  T
Q  646 tgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    || |||||  |||||||||||| |||  |||||||||||| |||||||||||||||||||    
T  43302167 tgagatctagattggagtgattgagtatttattaggtactactattaaaaaattataaat 43302108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 470 - 700
Target Start/End: Complemental strand, 36482231 - 36482001
Alignment:
Q  470 tacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcactttt 569  Q
    ||||||||||||||| | |||||||| ||||||||| ||  |||||||| |   ||||||||||||||||||||||||||||||| |||  |||||| ||    
T  36482231 tacctattaggtaccct-aatggagataatcttttttaggatcttataaaatctggggtcttacttaagacccccacttttaagcgggaatcgcactctt 36482133  T
Q  570 ttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgattt 668  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||| |||||| |||||||||||||||||||||||  |||||  || ||||||||     
T  36482132 ttaatattaaaaaattgaaatataattatataaagttattgatagttgattagtgaatctcatttaagaactttgtgtgatatctgggttagagtgattg 36482033  T
Q  669 agtgcttattaggtactgctattaaaaaatta 700  Q
    |||||||||||  |||| ||||||||| ||||    
T  36482032 agtgcttattaaatactactattaaaatatta 36482001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 494 - 714
Target Start/End: Complemental strand, 23156442 - 23156221
Alignment:
Q  494 gagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-ta 592  Q
    ||||||| |||| || || ||||||||  | | ||||||| ||||||||||| ||||| || ||||| ||||| |||||||||||||||||| |||  ||    
T  23156442 gagaatcgttttcagggttttataagatcatgagtcttacctaagacccccaattttatgcgggacctgcactcttttaatattaaaaaattaaaatgta 23156343  T
Q  593 atgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctatta 692  Q
     ||||||||| ||||||||||||| ||| ||| |||||||||||||||||||||| |||||   |||||| |||| |||||||||||| |||| ||||||    
T  23156342 gtgatataaagttattgatagttgattaatgggtctcatttaagaactttgtgtgagatctaggttggagggattaagtgcttattagctactactatta 23156243  T
Q  693 aaaaattataaataaatgatgt 714  Q
     |||| |||||||  |||||||    
T  23156242 taaaactataaattgatgatgt 23156221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 448 - 647
Target Start/End: Complemental strand, 36901285 - 36901085
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||| ||||||||||  |||||| |||||||||| ||  || || ||||||||| || |||||||||||    | |||||| |||||||| |||||    
T  36901285 gtcttaaccatttaagacttcgtaccttttaggtacctccatcggggataatctttttcagggtcttataagatccagagtcttatttaagacctccact 36901186  T
Q  548 tttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 646  Q
    ||||||| || |||  | | |||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| | ||||||||||||| ||| |||    
T  36901185 tttaagctgggcccttattcttttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagtaggtctcatttaagaaatttttgt 36901086  T
Q  647 g 647  Q
    |    
T  36901085 g 36901085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 448 - 647
Target Start/End: Original strand, 39853645 - 39853845
Alignment:
Q  448 gtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccact 547  Q
    |||||||| |||| |||  ||||||||||||||||| |||| |||  ||||||||||| |  ||||||||||||| ||||||||| |||||||||| |||    
T  39853645 gtcttaaccatttgagatccggtacctattaggtactttcattgggaagaatctttttcaaggtcttataagactcggggtcttatttaagacccctact 39853744  T
Q  548 tttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 646  Q
    ||||||| || |   |  | ||| |||||||||||||||||| |||||| |||||| ||||||||||||| ||||||| || |||||||||| ||| |||    
T  39853745 tttaagcggggcattcgttatttcaatattaaaaaattgaaatataatggtataaagttattgatagttgattagtgggtcccatttaagaaatttttgt 39853844  T
Q  647 g 647  Q
    |    
T  39853845 g 39853845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 510 - 736
Target Start/End: Original strand, 44441529 - 44441761
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaa-aataatgatataaaattatt 608  Q
    ||||||||||||  ||||||||| ||||||||||||||||||| | || ||| |||| |||||||||||||||||||||   |||||||||  | || ||    
T  44441529 gtcttataagacctggggtcttatttaagacccccacttttaatcgggtccctcactcttttaatattaaaaaattgaagtgtaatgatatccagttgtt 44441628  T
Q  609 gatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataa 707  Q
    |||||||| ||||||| ||||||||||||| ||| |||| ||| |||  ||||||  ||| ||| ||||||||||||| |  |||||||||||||||| |    
T  44441629 gatagttgattagtgggtctcatttaagaaatttttgtgagatgctgggttggagatattgagttcttattaggtactaccgttaaaaaattataaatga 44441728  T
Q  708 atgatgttca----tgagacccatttaagaacc 736  Q
     ||||||  |    |||||||||||||||||||    
T  44441729 gtgatgtgtacatttgagacccatttaagaacc 44441761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 566 - 714
Target Start/End: Complemental strand, 46282260 - 46282111
Alignment:
Q  566 ttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagt 663  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||  || ||| |||  ||||||     
T  46282260 ttttttaatattcaaaaattaaaacataatgatataaaattattgatagttgattagtgggtctcatttaagaaatttgaatgagatgctg-gttggagg 46282162  T
Q  664 gatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    ||| ||||| ||||||||||  |||||||||||||||||||| || |||||    
T  46282161 gatctagtgtttattaggtatcgctattaaaaaattataaattaacgatgt 46282111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 547 - 743
Target Start/End: Complemental strand, 36656757 - 36656556
Alignment:
Q  547 ttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtg 645  Q
    |||||||| |||||| ||| ||||||||||||||||||||| |  |||||||||||| ||||| ||||||| ||  ||| |||||||||||||||||||     
T  36656757 ttttaagcgggacccacacctttttaatattaaaaaattgatatgtaatgatataaagttattaatagttgatttatgggtctcatttaagaactttgta 36656658  T
Q  646 tgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttca----tgagacccatttaagaaccaaaaa 741  Q
    || |||   |||||||| |||| |||  ||||||| |||  ||||||||||||||||||| | |||| |  |    ||||||||||||||| ||||||||    
T  36656657 tgagatactaattggagggattgagtatttattagataccactattaaaaaattataaatgagtgatatatataagtgagacccatttaagtaccaaaaa 36656558  T
Q  742 at 743  Q
    ||    
T  36656557 at 36656556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 449 - 714
Target Start/End: Complemental strand, 46748271 - 46748013
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccactt 548  Q
    ||||||| |||||||||  |||| |||||||||||   || ||| ||||||||| || || |   ||||||||| | ||||||| |||||||||||||||    
T  46748271 tcttaaccatttaagacctggtatctattaggtactcccattggggagaatcttcttcaggg---tataagactcgaggtcttagttaagacccccactt 46748175  T
Q  549 ttaagcaggacccgcacttttttaatattaaaaaattga-aaataatgatataaaattattgatagttgtttagtggatctcattt--aagaactttgtg 645  Q
    |||||| |||||| |||| ||||||||||||| |||||| |  |||||||||||| ||||||| ||||| |||| || || |||||  || ||  |||||    
T  46748174 ttaagcgggacccacactcttttaatattaaataattgatatgtaatgatataaagttattgacagttgattagggggtcccattttaaaaaaaattgtg 46748075  T
Q  646 tgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
            ||||| ||| |||| ||| |||||||||| || ||||||||||||||||||||| ||||||    
T  46748074 -------agaatttgagggattgagttcttattaggtgctactattaaaaaattataaataagtgatgt 46748013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 558 - 697
Target Start/End: Original strand, 6068083 - 6068223
Alignment:
Q  558 acccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaa 656  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||| ||||||||| | |||||| || ||||| || ||||| |     
T  6068083 acccgcacttttttaatattaaaaaattgaaatgtaatgatagaaaattattggtagttgattagtggattttatttaaaaaatttgtatgagatcttag 6068182  T
Q  657 ttggagtgatttagtgcttattaggtactgctattaaaaaa 697  Q
    ||| ||  ||| ||| |||||||| |||| |||||||||||    
T  6068183 ttgaaggaattaagtacttattagatactactattaaaaaa 6068223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 568 - 714
Target Start/End: Original strand, 31330390 - 31330538
Alignment:
Q  568 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtga 665  Q
    ||||||||||||||||||||||  |||||||||| | ||||||||||||| |||||   ||||||||||||| ||||||||  ||  ||  |||||| ||    
T  31330390 ttttaatattaaaaaattgaaatgtaatgatatatacttattgatagttgattagtacgtctcatttaagaaatttgtgtgaaatgttgggttggaggga 31330489  T
Q  666 tttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    || ||||||||||||||||| | ||||||||||||||||| | ||||||    
T  31330490 ttgagtgcttattaggtactaccattaaaaaattataaatgagtgatgt 31330538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 534 - 693
Target Start/End: Original strand, 37698451 - 37698610
Alignment:
Q  534 ttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatt 632  Q
    |||||||||||||||  | || |||||| |||| |||||||||||||||||| |||  || ||||||||| || |||||||||  ||||||| | |||||    
T  37698451 ttaagacccccacttc-acgcgggacccacactcttttaatattaaaaaattaaaatgtagtgatataaagttgttgatagtttattagtgggtttcatt 37698549  T
Q  633 taagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaa 693  Q
    |||||| |||||||| ||| ||  |||||| |||| ||||||||||||||||| |||||||    
T  37698550 taagaattttgtgtgagatttgggttggagggattgagtgcttattaggtactactattaa 37698610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 511 - 638
Target Start/End: Complemental strand, 48767342 - 48767214
Alignment:
Q  511 tcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaat-aatgatataaaattattg 609  Q
    |||||||||||  ||||||| || |||||||| || | |||||  ||||   ||||||||||||| |||||||||||||   ||||||||||| ||||||    
T  48767342 tcttataagacctggggtctcacataagaccctcaatcttaagtgggactaacacttttttaataataaaaaattgaaatgcaatgatataaagttattg 48767243  T
Q  610 atagttgtttagtggatctcatttaagaa 638  Q
    ||||||| ||||||| |||||||||||||    
T  48767242 atagttgattagtgggtctcatttaagaa 48767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 511 - 699
Target Start/End: Original strand, 2008528 - 2008718
Alignment:
Q  511 tcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattg 609  Q
    ||||||||||||   ||| ||||||||||||  || | |||||  |||| |  ||||||||||||||||||||||||||  ||||| |||||||||||||    
T  2008528 tcttataagactcatggttttacttaagaccttcaatcttaagtgggacacatacttttttaatattaaaaaattgaaatgtaatggtataaaattattg 2008627  T
Q  610 atagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgc-ttattaggtactgctattaaaaaatt 699  Q
    ||||||| |||  || |  |||||||||| |||||||| ||||||  || ||| |||| ||| | |||||| ||||| ||| |||||||||    
T  2008628 atagttgattaacgggttccatttaagaaatttgtgtgagatctgggttagagggattgagtactttattaagtactactactaaaaaatt 2008718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 525 - 714
Target Start/End: Original strand, 4958191 - 4958385
Alignment:
Q  525 gggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtg 623  Q
    |||||| ||||||||||| |  | |||||  ||| || ||| ||||||||||||||||||||| |  |||||||||||| || |||||||||| || |||    
T  4958191 gggtctcacttaagaccctccatcttaagtgggatccacacctttttaatattaaaaaattgatatgtaatgatataaagttgttgatagttgatttgtg 4958290  T
Q  624 gatctcatttaagaactttgtgtgtgat----ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    | | |||||||||||  ||||||| |||     |   |||||| |||| |||| ||||||| |||| ||||||||||||||||||| ||||||||    
T  4958291 ggtttcatttaagaaagttgtgtgagatgttgttcggttggagggattgagtgtttattagatactactattaaaaaattataaatgaatgatgt 4958385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 571 - 713
Target Start/End: Complemental strand, 29914528 - 29914383
Alignment:
Q  571 taatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaa-ttggagtgattt 668  Q
    |||||||||||||||||||  |||| ||||||| ||||||||||||| |||| |  || |||||| ||| |||||||| ||| | || |||||| ||||     
T  29914528 taatattaaaaaattgaaatgtaataatataaagttattgatagttgattagcgagtcccatttatgaaatttgtgtgagatgttaagttggagggatta 29914429  T
Q  669 agtgcttattaggtactgctatta-aaaaattataaataaatgatg 713  Q
    |||| |||||||||| | |||||| ||||||||||||||| |||||    
T  29914428 agtgtttattaggtattactattataaaaattataaataagtgatg 29914383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 446 - 714
Target Start/End: Original strand, 38223849 - 38224121
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||||||||||||   |||||||| | ||||| |||| ||  || ||  |||||| | ||||||||||||   | |||| ||||||||| | ||    
T  38223849 gggtcttaactatttaagatctggtacctaattggtactttcattgtggacaaaatttttgggggtcttataagacccagagtctcacttaagactctca 38223948  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaattga-aaataatgatataaaattattgatagttgtttagtggatctca--tttaagaacttt 642  Q
     | |||||  |||||| ||| ||||||||||||||||||| | |  |||||||||||  ||||||||||||| ||  ||  |||||  ||||||||||||    
T  38223949 atcttaagtgggacccacacctttttaatattaaaaaatttatatgtaatgatataatgttattgatagttgatttttgagtctcatttttaagaacttt 38224048  T
Q  643 gtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    || || ||| |||  ||| || |||| ||| ||||||||||||| | || |||||||| ||||||||| ||||    
T  38224049 gtttgagatactgggttgaagggattgagtacttattaggtactaccatcaaaaaattctaaataaatcatgt 38224121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 449 - 714
Target Start/End: Original strand, 19987037 - 19987303
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccactt 548  Q
    |||||||||||||||||   ||||||||||||||||  |  ||  |||||  |||||| | ||| ||||||||    ||||| ||||||||||| || |     
T  19987037 tcttaactatttaagacctagtacctattaggtacccccgttgtggagaaa-tttttgggggtcctataagacccaaggtctcacttaagaccctcaatc 19987135  T
Q  549 ttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 647  Q
    |||||   ||||| ||  ||||||||||||||||||||  |  ||||||| |||| ||||||||||| | || || | || |||||||||||||||||||    
T  19987136 ttaagtgagacccacaactttttaatattaaaaaattgttatgtaatgatttaaagttattgatagtcgatttgtaggtcccatttaagaactttgtgtg 19987235  T
Q  648 tgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
     |||  ||  |||||| |||   || ||||||| ||||| ||||||||||||||||||| ||||||||    
T  19987236 agatgttgggttggagggatcatgtacttattatgtactactattaaaaaattataaatgaatgatgt 19987303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 473 - 623
Target Start/End: Complemental strand, 25324723 - 25324573
Alignment:
Q  473 ctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcactttttta 572  Q
    |||||| ||||||| | ||  ||||| ||||||  ||||||||| |||  |||||||| |||||||||| ||| | |||||   ||||| |||||||| |    
T  25324723 ctattaagtacctttattgaggagaaactttttcggagtcttatgagatcaggggtctcacttaagaccaccaatcttaagtgagacccacacttttt-a 25324625  T
Q  573 atattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtg 623  Q
    ||||||||||||||  | |||||||||||||||||||||||| || ||||||    
T  25324624 atattaaaaaattgttatataatgatataaaattattgatagctgattagtg 25324573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 522 - 705
Target Start/End: Complemental strand, 47841593 - 47841411
Alignment:
Q  522 taggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgttta 620  Q
    |||||||||||  ||||||||| ||||| |||  |||| | ||| ||||||||||||||||||||| |  | ||| |||||| ||||||||||||| ||     
T  47841593 taggggtctta--taagaccccaacttt-aagtgggactcacacctttttaatattaaaaaattgatatgtgatggtataaagttattgatagttgattt 47841497  T
Q  621 gtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    |||  ||||||||||||||||| |||| ||| ||   |||||| |||| ||| |||||||  |||| |||||| ||||||||||||    
T  47841496 gtgagtctcatttaagaactttatgtgagatgcttggttggagggattgagtacttattaaatactactattacaaaattataaat 47841411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 501 - 714
Target Start/End: Complemental strand, 5514041 - 5513826
Alignment:
Q  501 tttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatat 599  Q
    ||||| ||| |||||||||||| ||| ||| |||||||| ||||| | ||||||  ||| | |||| ||||||||| ||||||||||||  |||| ||||    
T  5514041 tttttcagaatcttataagactcgggatctcacttaaga-ccccaatcttaagcgagacacacactcttttaatataaaaaaattgaaatgtaattatat 5513943  T
Q  600 aaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctatt-aaaaaa 697  Q
    ||| |||||||| || | ||||||  |||||||||| || |||| ||| ||| | |  |||||| |||| ||  |||||||| || | ||||| ||||||    
T  5513942 aaagttattgatggtcgattagtgagtctcatttaaaaaatttgcgtgagatacggggttggagggattgagaacttattagatattactattaaaaaaa 5513843  T
Q  698 ttataaataaatgatgt 714  Q
    |||||||||| ||||||    
T  5513842 ttataaataagtgatgt 5513826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 567 - 646
Target Start/End: Complemental strand, 25307612 - 25307532
Alignment:
Q  567 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgt 646  Q
    ||||||||||||||||||||| |  |||||||||||  |||||||| |||| || |||||||||||||||||| |||||||    
T  25307612 tttttaatattaaaaaattgagatgtaatgatataagtttattgattgttgatttgtggatctcatttaagaaatttgtgt 25307532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 534 - 635
Target Start/End: Complemental strand, 44441449 - 44441347
Alignment:
Q  534 ttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatt 632  Q
    ||||||||||||  ||||| |||| | |||||  |||||||||||||||||| |||  || ||||||||| ||||||||||||| ||||||| || ||||    
T  44441449 ttaagacccccaactttaaacagggcgcgcacgcttttaatattaaaaaattaaaatgtagtgatataaagttattgatagttgattagtgggtcccatt 44441350  T
Q  633 taa 635  Q
    |||    
T  44441349 taa 44441347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 524 - 615
Target Start/End: Original strand, 19594001 - 19594093
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagtt 615  Q
    ||||||| ||||||||| | || | |||||   ||||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  19594001 ggggtctaacttaagactctcaatcttaagtgagacccacacctttttaagattaaaaaattgaaatataatgatataaagttattgatagtt 19594093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 524 - 614
Target Start/End: Complemental strand, 19753133 - 19753042
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagt 614  Q
    ||||||| ||||||||| | || | |||||   ||||| ||| ||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  19753133 ggggtctaacttaagactctcaatcttaagtgagacccacacctttttaagattaaaaaattgaaatgtaatgatataaaattattgatagt 19753042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 556 - 712
Target Start/End: Original strand, 32724215 - 32724376
Alignment:
Q  556 ggacccgcacttttttaatattaaaaaattga-aaataatgatataaaattattga---tagttgtttagtggatctcatttaagaactttgtgtgtgat 651  Q
    |||||| ||| ||||||||||||||||||||| |  |||||||||||| |||||||   |||||  ||||||| |  |||||||||| ||||| || |||    
T  32724215 ggacccacacctttttaatattaaaaaattgatatgtaatgatataaagttattgatactagttaattagtgggttccatttaagaaatttgtttgagat 32724314  T
Q  652 -ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgat 712  Q
      ||  ||||||  |||| || ||||||||| ||  ||||||||||||||||||| ||||||    
T  32724315 gttgggttggagaaatttggttcttattaggcaccactattaaaaaattataaatgaatgat 32724376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 566 - 647
Target Start/End: Original strand, 13057863 - 13057946
Alignment:
Q  566 ttttttaatattaaaaaattgaaaata--atgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 647  Q
    ||||||||||||||||||||  ||||   |||||||||| ||||||||||||| |||||   || |||||||||| ||||||||    
T  13057863 ttttttaatattaaaaaatttgaaatgttatgatataaagttattgatagttgattagtaagtcacatttaagaaatttgtgtg 13057946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 567 - 622
Target Start/End: Original strand, 36039050 - 36039106
Alignment:
Q  567 tttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagt 622  Q
    ||||||||||||||||| ||||| ||||||||||||| |||| |||||||| |||||    
T  36039050 tttttaatattaaaaaaatgaaatataatgatataaagttatcgatagttgattagt 36039106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 479
Target Start/End: Complemental strand, 36658119 - 36658088
Alignment:
Q  448 gtcttaactatttaagactcggtacctattag 479  Q
    ||||||||||||||||||||||||||||||||    
T  36658119 gtcttaactatttaagactcggtacctattag 36658088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 566 - 635
Target Start/End: Original strand, 15018373 - 15018443
Alignment:
Q  566 ttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaa 635  Q
    |||||||||||| ||||||| |||  |||| ||||||| ||||||||| ||| ||||| ||||||||||||    
T  15018373 ttttttaatattcaaaaattaaaatgtaataatataaagttattgataattgattagtagatctcatttaa 15018443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 656 - 714
Target Start/End: Original strand, 43788610 - 43788668
Alignment:
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||| ||| ||| |||| ||||||||  |||||||||||||||||||| ||||||    
T  43788610 attggagtcattgagtccttaataggtacttttattaaaaaattataaataagtgatgt 43788668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 524 - 612
Target Start/End: Complemental strand, 23802304 - 23802216
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgata 612  Q
    |||||||||||||||||| | | | ||||||||||  | |||| ||| ||||||||||||||||||  |||||||||||| | |||||||    
T  23802304 ggggtcttacttaagacctcaa-tcttaagcaggattcacactctttcaatattaaaaaattgaaatgtaatgatataaagtaattgata 23802216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 674 - 707
Target Start/End: Original strand, 27334475 - 27334508
Alignment:
Q  674 ttattaggtactgctattaaaaaattataaataa 707  Q
    |||||||||||| |||||||||||||||||||||    
T  27334475 ttattaggtactactattaaaaaattataaataa 27334508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 632 - 705
Target Start/End: Original strand, 30859633 - 30859706
Alignment:
Q  632 ttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    ||||||| ||| |||| ||||||  ||||||  ||| ||| |||||| |||||| |||||||||||||||||||    
T  30859633 ttaagaaatttttgtgagatctgggttggaggaattgagtacttattgggtactactattaaaaaattataaat 30859706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 7e-58; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 437 - 714
Target Start/End: Complemental strand, 46006336 - 46006059
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||  |||||||||||||||||||| | ||| ||||||||||||  ||| || |||||||||||| |  |||||||||||    ||||||||||||    
T  46006336 ccattgggagggtcttaactatttaagaccccgtaactattaggtacccccaacggggagaatcttttttatggtcttataagagcctgggtcttactta 46006237  T
Q  537 agacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaa 635  Q
    |||| |||||||||||||  |||| ||||| |||||||||||||||||| ||| ||||||||||||| ||||||||||||| ||| ||| ||  ||||||    
T  46006236 agacgcccacttttaagcgtgacctgcactcttttaatattaaaaaattaaaatataatgatataaagttattgatagttgattactgggtcaaatttaa 46006137  T
Q  636 gaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||||||  ||||||  ||||||||||| | || |||||||||||| ||||||||||||||||||| | ||||||    
T  46006136 gaactttgtgtaagatctgggttggagtgattgaatg-ttattaggtactactattaaaaaattataaatgagtgatgt 46006059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 449 - 602
Target Start/End: Original strand, 35539439 - 35539594
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaaga-cccccact 547  Q
    ||||||| ||||||||| ||||| ||||||||||||| ||||| ||||||||||||| || ||||||||||||  |  ||||||||||||| |||||| |    
T  35539439 tcttaaccatttaagacccggtatctattaggtacctccaatgtagagaatctttttcagggtcttataagacccgatgtcttacttaagaccccccaat 35539538  T
Q  548 tttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaa 602  Q
    ||||||  ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  35539539 tttaagtgggacccgcacttttttaatattaaaaagttgaaatataatgatataaa 35539594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 589 - 714
Target Start/End: Original strand, 35539608 - 35539733
Alignment:
Q  589 aataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgct 688  Q
    ||||| |||||||| ||||||||||||| ||| ||| || ||||||||||||||||||| |||||   ||||||||||  |||| |||||||||||| ||    
T  35539608 aataacgatataaagttattgatagttgattaatgggtcccatttaagaactttgtgtgagatcttggttggagtgatcgagtgtttattaggtactact 35539707  T
Q  689 attaaaaaattataaataaatgatgt 714  Q
    ||||||||||||||||||||||||||    
T  35539708 attaaaaaattataaataaatgatgt 35539733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 446 - 647
Target Start/End: Complemental strand, 52995901 - 52995700
Alignment:
Q  446 gggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagaccccca 545  Q
    |||||||||||||||||||||| ||| ||||||||||   | | ||||||||||||||||  | || |||||| ||| ||| ||| |||||||| || ||    
T  52995901 gggtcttaactatttaagactcagtatctattaggtattcttactggagagaatctttttcggggtattataatactcggg-tctcacttaagatcctca 52995803  T
Q  546 cttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgt 644  Q
     | |||| | ||| || |||| |||||||||||||||| | ||| ||||||||||||| ||||||||||||| |||||   |||||||||| || |||||    
T  52995802 atcttaaacgggagcctcactcttttaatattaaaaaaattaaagataatgatataaagttattgatagttgattagtatgtctcatttaacaaatttgt 52995703  T
Q  645 gtg 647  Q
    |||    
T  52995702 gtg 52995700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 563 - 643
Target Start/End: Original strand, 54422716 - 54422796
Alignment:
Q  563 cacttttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttg 643  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||    
T  54422716 cacttttttagtattaaaaaattgaatgtaatgatataaaattattgataattgattagtgggtctcatttaagaaatttg 54422796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 510 - 705
Target Start/End: Original strand, 46048821 - 46049019
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattg-aaaataatgatataaaattatt 608  Q
    ||||||||||||| ||||||| ||||||||||| || | |||||  ||||||  || ||| ||||||||||||||||  |  ||||| |||||| |||||    
T  46048821 gtcttataagactcggggtctcacttaagaccctcaatcttaagtgggacccaaacctttgtaatattaaaaaattgttatgtaatggtataaagttatt 46048920  T
Q  609 gatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgctatt-aaaaaattataaat 705  Q
    |||||||| || |||  |  ||||||||||||||||||| ||| |||| |||||| ||||   | |||||||||||||  |||| ||||||||||||||    
T  46048921 gatagttgatttgtgagttccatttaagaactttgtgtgagatgctgagttggagggattggatacttattaggtactaatattaaaaaaattataaat 46049019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 561 - 705
Target Start/End: Original strand, 41211973 - 41212118
Alignment:
Q  561 cgcacttttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattg 659  Q
    ||||| |||||||||||||||| |  ||  |||||||||||| ||||||||||||| |||||   |||||||||||||  |||| || |||  |  ||||    
T  41211973 cgcacctttttaatattaaaaattaaaatgtaatgatataaagttattgatagttgattagtatgtctcatttaagaaacttgtatgagatgttcgattg 41212072  T
Q  660 gagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    ||| |||||| ||||||||||||||| |||||| ||||||||||||    
T  41212073 gagggatttactgcttattaggtactactattacaaaattataaat 41212118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 568 - 655
Target Start/End: Complemental strand, 36902451 - 36902363
Alignment:
Q  568 ttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctga 655  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||| || ||||||||||| ||||| || |||||||    
T  36902451 ttttaatattaaaaaattaaaatataatgatataaagttattgatagttgattagtgaatttcatttaagaaatttgtttgagatctga 36902363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 541 - 635
Target Start/End: Complemental strand, 30595236 - 30595141
Alignment:
Q  541 ccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaa 635  Q
    |||||||||||||| |||||  || | ||||| |||||||||||| |||  |||||||||||||||||||||||||| ||||||  ||||||||||    
T  30595236 ccccacttttaagcgggaccttcattcttttagtattaaaaaatttaaatgtaatgatataaaattattgatagttgattagtgagtctcatttaa 30595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 510 - 616
Target Start/End: Original strand, 55272746 - 55272853
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattatt 608  Q
    ||||||||||||  | | || ||||||||||| ||| |||||||| | |  |||||  |||||||||||||||||||||| ||||||||||||| |||||    
T  55272746 gtcttataagacccgagttcctacttaagacctccatttttaagcggaattcgcacacttttaatattaaaaaattgaaatataatgatataaagttatt 55272845  T
Q  609 gatagttg 616  Q
    ||||||||    
T  55272846 gatagttg 55272853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 563 - 625
Target Start/End: Complemental strand, 19900264 - 19900201
Alignment:
Q  563 cacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtgga 625  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||| ||||||| ||||||||    
T  19900264 cacttttttaatattaaaaaattaaaatgtaatgatataaaattatttatagttgattagtgga 19900201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 551 - 705
Target Start/End: Complemental strand, 36277910 - 36277750
Alignment:
Q  551 aagcaggacccgcacttttttaatattaaaaaattgaa----aataatgatataaaattattgatagttgtttagtggatctcattt-aagaactttgtg 645  Q
    |||| |||| |||||| |||||||||||||||||||||    |||||||||||||| ||||||||| ||  ||||||| | | |||| || || ||||||    
T  36277910 aagcgggactcgcactcttttaatattaaaaaattgaaatgtaataatgatataaagttattgatattttattagtgggtttaatttaaaaaaatttgtg 36277811  T
Q  646 tgtgat-ctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    || ||| |||| ||||||  ||| | | |||||||| || | |||||||||||||||||||    
T  36277810 tgagatgctgagttggaggaattgaatacttattagatattactattaaaaaattataaat 36277750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 560 - 637
Target Start/End: Complemental strand, 47075683 - 47075605
Alignment:
Q  560 ccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaaga 637  Q
    |||||| ||||||||||||||||||||| |  ||||||||||||||||| |||||||| ||||||  |||| |||||||    
T  47075683 ccgcacatttttaatattaaaaaattgatatgtaatgatataaaattatagatagttgattagtgagtctcgtttaaga 47075605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 567 - 647
Target Start/End: Complemental strand, 33832069 - 33831988
Alignment:
Q  567 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 647  Q
    ||||||||||||||||||| ||   ||||||||| |||||||||||||||| |||||||||  |||| ||||| ||||||||    
T  33832069 tttttaatattaaaaaattaaattgtaatgatatgaaattattgatagttgattagtggattccattaaagaaatttgtgtg 33831988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 528 - 647
Target Start/End: Original strand, 26085023 - 26085143
Alignment:
Q  528 tcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggat 626  Q
    |||||||||||| | ||| | |||||  ||| || || |||||||||||||||||||||||| |||||| |||||| |||||||| |||| | ||||  |    
T  26085023 tcttacttaagatctccaatcttaagtgggatccacatttttttaatattaaaaaattgaaatataatggtataaagttattgatggttgataagtgtgt 26085122  T
Q  627 ctcatttaagaactttgtgtg 647  Q
    | |||||||||| ||| ||||    
T  26085123 cccatttaagaaatttatgtg 26085143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 594 - 714
Target Start/End: Complemental strand, 13755251 - 13755133
Alignment:
Q  594 tgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaa 693  Q
    ||||||||| ||||||||||||| ||  ||| || |||||||||| |||||||| |  | |  || ||| |||| ||| ||||||| ||||| |||||||    
T  13755251 tgatataaagttattgatagttgatttttgggtcccatttaagaaatttgtgtgag--cagggttagagggattgagttcttattaagtactactattaa 13755154  T
Q  694 aaaattataaataaatgatgt 714  Q
    |||||||||||| | ||||||    
T  13755153 aaaattataaatgagtgatgt 13755133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 712
Target Start/End: Complemental strand, 40242210 - 40242167
Alignment:
Q  669 agtgcttattaggtactgctattaaaaaattataaataaatgat 712  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||    
T  40242210 agtgcttattaggtattactattaaaaaattataaataagtgat 40242167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 715
Target Start/End: Complemental strand, 40485130 - 40485071
Alignment:
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgtt 715  Q
    ||||||||| || | |||||||||||||||  |||||||||||||||||  |||||||||    
T  40485130 attggagtggttgaatgcttattaggtactattattaaaaaattataaaagaatgatgtt 40485071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 660 - 714
Target Start/End: Complemental strand, 29950820 - 29950766
Alignment:
Q  660 gagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||| |||||||||||| |||| ||||||||||| ||||||| | ||||||    
T  29950820 gagtgattgagtgcttattagatactactattaaaaaaatataaatgagtgatgt 29950766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 660 - 714
Target Start/End: Complemental strand, 29999974 - 29999920
Alignment:
Q  660 gagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||| |||||||||||| |||| ||||||||||| ||||||| | ||||||    
T  29999974 gagtgattgagtgcttattagatactactattaaaaaaatataaatgagtgatgt 29999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 563 - 612
Target Start/End: Original strand, 41211726 - 41211776
Alignment:
Q  563 cacttttttaatattaaaaaattgaaa-ataatgatataaaattattgata 612  Q
    |||||||||||||||||||||||||||  |||||||||||| ||| |||||    
T  41211726 cacttttttaatattaaaaaattgaaacgtaatgatataaagttaatgata 41211776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 660 - 714
Target Start/End: Original strand, 52393731 - 52393785
Alignment:
Q  660 gagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||| | || ||||||| || || |||||||||||||||||||||||||||    
T  52393731 gagtgattgaatgtttattagatattgttattaaaaaattataaataaatgatgt 52393785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 2e-52; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 437 - 680
Target Start/End: Original strand, 13486446 - 13486693
Alignment:
Q  437 ccattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttactta 536  Q
    |||||||| | |||||||||||||||||| | |||| |||||||||||| |||||| |||||| ||||| ||  ||||| |||||| | |||||||||||    
T  13486446 ccattggaagagtcttaactatttaagacgcagtacatattaggtacctccaatggggagaatttttttaaggatcttacaagactcgaggtcttactta 13486545  T
Q  537 agacccccacttttaagcag---gacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatt 632  Q
    |||||||| ||||||||| |   |||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||| || ||||||| |  ||||    
T  13486546 agacccccgcttttaagcggcgagacccgcactattttaatattaaaaaattgaaatataatgatataaagttattgatagctgattagtgggttccatt 13486645  T
Q  633 taagaactttgtgtgtgatctgaattggagtgatttagtgcttattag 680  Q
    ||| ||||||||| | |||||   ||||||||||| ||||||||||||    
T  13486646 taaaaactttgtgagagatctaggttggagtgattgagtgcttattag 13486693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 528 - 712
Target Start/End: Complemental strand, 1309930 - 1309745
Alignment:
Q  528 tcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggat 626  Q
    ||||||||| |||| | ||||||||| |||| ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| ||| |||||| ||    
T  1309930 tcttacttacgacctctacttttaagtaggatccgcactcttttaatattaaaaaattaaaatataatgatataaaattattgataattgattagtgtat 1309831  T
Q  627 ctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgat 712  Q
    |  |||||||||||||||||| ||| || |||||||||||| |||||||||||| ||||  |||||||||||||||||||||||||    
T  1309830 ccaatttaagaactttgtgtgagatttggattggagtgattgagtgcttattagatactattattaaaaaattataaataaatgat 1309745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 556 - 744
Target Start/End: Original strand, 2375532 - 2375719
Alignment:
Q  556 ggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctg 654  Q
    ||||||||||| |||||||||||||||||| ||| ||||| ||||||| ||||||||||||| ||||||| || ||||||||||||||||||| ||| ||    
T  2375532 ggacccgcactcttttaatattaaaaaattaaaatataattatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagatttg 2375631  T
Q  655 aattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgttcatgagacccatttaagaaccaaaaaatg 744  Q
    |  | |||||||| | || |||||||||||| ||||||||||||||||||||| |||    | |||||| ||||||||||| ||||||||    
T  2375632 aggttgagtgattgaatgtttattaggtactactattaaaaaattataaataagtga--cacgtgagactcatttaagaactaaaaaatg 2375719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 441 - 667
Target Start/End: Complemental strand, 42951986 - 42951760
Alignment:
Q  441 tggatgggtcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagac 540  Q
    |||| |||||||||  ||||||||  | ||| |||||||||||||| | ||| | |||| ||||| |   |||||||||| | | | ||||| |||||||    
T  42951986 tggaagggtcttaaacatttaagatccagtatctattaggtacctttattggggtgaatttttttcaagatcttataaga-tcgtgatcttatttaagac 42951888  T
Q  541 ccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaac 639  Q
    ||||| |||||| | ||  |||||  |||||||||||||||||||||||  || ||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  42951887 ccccaattttaaacggggtccgcatatttttaatattaaaaaattgaaatgtagtgatataaaattattgataattgattagtgggtctcatttaagaac 42951788  T
Q  640 tttgtgtgtgatctgaattggagtgatt 667  Q
    |||||||| ||||||| |||||| ||||    
T  42951787 tttgtgtgagatctgagttggagggatt 42951760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 556 - 744
Target Start/End: Complemental strand, 41521002 - 41520808
Alignment:
Q  556 ggacccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ct 653  Q
    |||||| ||| ||||||||| ||||||||||| |  ||||| |||||| ||||||||||||  || |||| || |||||| |||||||||||| ||| ||    
T  41521002 ggacccacacctttttaatagtaaaaaattgatatgtaatggtataaagttattgatagttaatttgtgggtcccatttaggaactttgtgtgagatgct 41520903  T
Q  654 gaattggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt----tcatgagacccatttaagaaccaaaaaatg 744  Q
    |  |||||| |||| ||| ||||||||||||  ||||||||||||||||||||| ||||||     | ||| |||||||||||||||||||||||    
T  41520902 gggttggagggattgagttcttattaggtaccactattaaaaaattataaataagtgatgtgtacacgtgaaacccatttaagaaccaaaaaatg 41520808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 568 - 714
Target Start/End: Complemental strand, 13420836 - 13420690
Alignment:
Q  568 ttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 666  Q
    |||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||  || ||||||| ||||||||||| ||||| | ||||||||||    
T  13420836 ttttaatattaaaaaattgaaatataattatataaagttattgatagttgattagtgagtcccatttaacaactttgtgtgagatctaagttggagtgat 13420737  T
Q  667 ttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
      |||| |||||| ||||  ||||| |||||||| |||||| ||||||    
T  13420736 cgagtgattattaagtaccactatt-aaaaattacaaataagtgatgt 13420690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 568 - 714
Target Start/End: Complemental strand, 26675607 - 26675460
Alignment:
Q  568 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 666  Q
    |||||||||||||||||||||   | |||||||||| ||||||||| ||| ||||||| ||| ||||||||| ||| |||| ||||||| |||||  |||    
T  26675607 ttttaatattaaaaaattgaagtgtgatgatataaagttattgatatttgattagtgggtctaatttaagaaatttatgtgagatctgagttggaaggat 26675508  T
Q  667 ttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    | ||||||||| || |||| ||||||||||||||||||| | ||||||    
T  26675507 taagtgcttataagatactactattaaaaaattataaatgagtgatgt 26675460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 568 - 714
Target Start/End: Complemental strand, 26947215 - 26947068
Alignment:
Q  568 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 666  Q
    |||||||||||||||||||||   | |||||||||| ||||||||| ||| ||||||| ||| ||||||||| ||| |||| ||||||| |||||  |||    
T  26947215 ttttaatattaaaaaattgaagtgtgatgatataaagttattgatatttgattagtgggtctaatttaagaaatttatgtgagatctgagttggaaggat 26947116  T
Q  667 ttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    | ||||||||| || |||| ||||||||||||||||||| | ||||||    
T  26947115 taagtgcttataagatactactattaaaaaattataaatgagtgatgt 26947068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 510 - 644
Target Start/End: Original strand, 12593063 - 12593199
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaa--taatgatataaaattat 607  Q
    ||||||||||||  || |||| |||||||||||||| |||||||||  |||| |||| |||||||||||||||| | ||||  |||||||||||| ||||    
T  12593063 gtcttataagacccggtgtctcacttaagacccccaattttaagcaaaacccacactcttttaatattaaaaaagttaaaatgtaatgatataaagttat 12593162  T
Q  608 tgatagttgtttagtggatctcatttaagaactttgt 644  Q
    ||||| ||| ||||| | ||||||||||||| |||||    
T  12593163 tgataattgattagttggtctcatttaagaaatttgt 12593199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 570 - 704
Target Start/End: Complemental strand, 35463354 - 35463217
Alignment:
Q  570 ttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatct--gaattggagtgat 666  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||  || || ||||||||||| |||||||| ||| |  |  ||| |  |||    
T  35463354 ttaatattaaaaaattgaaacataatgatataaaattattgatagttgatttatgaatttcatttaagaaatttgtgtgagatgttgggtttgaaaggat 35463255  T
Q  667 ttagtgcttattaggtactgctattaaaaaattataaa 704  Q
    | ||| ||||||||||||| ||||||||||||||||||    
T  35463254 tgagtacttattaggtactactattaaaaaattataaa 35463217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 549 - 647
Target Start/End: Complemental strand, 15468269 - 15468170
Alignment:
Q  549 ttaagcaggacccgcacttttttaatattaaaaaattgaaaat-aatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtg 647  Q
    |||||| | |||| |||| |||||||||||||||||||||| | |||||||||||||||||||||  || |||||||||| |||||||||| ||||||||    
T  15468269 ttaagcggtacccacactcttttaatattaaaaaattgaaatttaatgatataaaattattgataaatgattagtggatcccatttaagaaatttgtgtg 15468170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 568 - 744
Target Start/End: Original strand, 7293042 - 7293223
Alignment:
Q  568 ttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgat 666  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||||||  ||||||  ||  |||||| ||||||||||| ||| ||  | |||| ||     
T  7293042 ttttaatattaaaaaattgaaatgtaatgatataatgttattgatagttaattagtgagtcctatttaaaaactttgtgtgagatttgggtcggagggaa 7293141  T
Q  667 ttagtgcttattaggtactgctattaaaaaattataaataaatgatgttca----tgagacccatttaagaaccaaaaaatg 744  Q
    | | | ||||| ||||| | ||||||||||||||||||| |||||||| ||    || |||||||||||||||| |||||||    
T  7293142 tgaatacttataaggtattactattaaaaaattataaatgaatgatgtgcacgcgtgggacccatttaagaacccaaaaatg 7293223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 510 - 705
Target Start/End: Complemental strand, 18396703 - 18396508
Alignment:
Q  510 gtcttataagactaggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattatt 608  Q
    |||||||||||   ||||||||| ||||||||||||  ||||||| || || |||   |||||||||||||||||||||| ||  ||||||||| |||||    
T  18396703 gtcttataagatccggggtcttatttaagacccccaactttaagcggggcc-gcatgcttttaatattaaaaaattgaaatattgtgatataaagttatt 18396605  T
Q  609 gatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggagtgatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
     ||||||| || |||| || |||||||||  |||||||| ||||  | || |||  ||| |||  ||||||||||||  ||||||||||||||||||    
T  18396604 tatagttgattggtgggtcccatttaagatttttgtgtgagatccaagttagaggaattgagtatttattaggtactattattaaaaaattataaat 18396508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 591 - 714
Target Start/End: Original strand, 29558357 - 29558480
Alignment:
Q  591 taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttattaggtactgcta 689  Q
    |||||||||||||||||||||||||| ||| | ||||| ||||||||| |||||||| ||| |||| ||| || |||| ||||||||||| |||||  ||    
T  29558357 taatgatataaaattattgatagttgattattagatcttatttaagaaatttgtgtgagatgctgagttgaagagattaagtgcttatta-gtactatta 29558455  T
Q  690 ttaaaaaattataaataaatgatgt 714  Q
    |||||||||| ||||| | ||||||    
T  29558456 ttaaaaaattgtaaatgagtgatgt 29558480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 558 - 633
Target Start/End: Original strand, 8228752 - 8228828
Alignment:
Q  558 acccgcacttttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcattt 633  Q
    |||||||||||| ||||||||||||| |||||  |||||||||| ||||||||||||||| || |||||||| ||||    
T  8228752 acccgcacttttctaatattaaaaaaatgaaatgtaatgatatacaattattgatagttgattcgtggatcttattt 8228828  T

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Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 567 - 714
Target Start/End: Complemental strand, 837874 - 837727
Alignment:
Q  567 tttttaatattaaaaaattgaaaa-taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtg 664  Q
    ||||||||||||||| |||||||  ||||||||||||||||| |||||||  |||||   | ||||||||||| ||| |||| ||| |||  ||| || |    
T  837874 tttttaatattaaaatattgaaatgtaatgatataaaattatagatagtt--ttagtttgtttcatttaagaaatttatgtgagatactgggttgaagag 837777  T
Q  665 atttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    ||| |||||||||||| || |||| ||||||| |||||||| | ||||||    
T  837776 attgagtgcttattagatattgctgttaaaaatttataaatgagtgatgt 837727  T

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Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 449 - 521
Target Start/End: Original strand, 4432229 - 4432300
Alignment:
Q  449 tcttaactatttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagac 521  Q
    ||||||| ||||||||||||||||||||||||||||  |  |||||||||||||||| |  ||||||||||||    
T  4432229 tcttaaccatttaagactcggtacctattaggtacc-ccgttggagagaatctttttaaaggtcttataagac 4432300  T

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Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 438 - 492
Target Start/End: Original strand, 2375477 - 2375531
Alignment:
Q  438 cattggatgggtcttaactatttaagactcggtacctattaggtaccttcaatgg 492  Q
    ||||||| |||||||||||||| |||| | ||||||||||||||| |||||||||    
T  2375477 cattggaagggtcttaactattcaagaattggtacctattaggtatcttcaatgg 2375531  T

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Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 656 - 714
Target Start/End: Complemental strand, 4747108 - 4747050
Alignment:
Q  656 attggagtgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    |||||||||||| |||||||||||| || || |||||||||||||||||| ||| ||||    
T  4747108 attggagtgattgagtgcttattagataatgttattaaaaaattataaatgaattatgt 4747050  T

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Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 563 - 697
Target Start/End: Original strand, 31111753 - 31111890
Alignment:
Q  563 cacttttttaatattaaaaaattgaaaa--taatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattg 659  Q
    |||||||||||||||||||||||  |||  | ||||||||||| |||| ||||||| ||| ||  ||| |||||| || |||||||| ||| |||| |||    
T  31111753 cacttttttaatattaaaaaatttgaaatgtgatgatataaaactattaatagttgattaatgattcttatttaaaaaatttgtgtgagatgctgagttg 31111852  T
Q  660 gagtgatttagtgcttattaggtactgctattaaaaaa 697  Q
     ||| ||| | ||| ||||||||| | |||||||||||    
T  31111853 aagtaattgattgcatattaggtattactattaaaaaa 31111890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 567 - 685
Target Start/End: Original strand, 3558767 - 3558887
Alignment:
Q  567 tttttaatattaaaaaattga-aaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtg 664  Q
    ||||||||||||||||||||| |  |||| || |||| ||||||||||||| ||| ||| || |||||| ||| ||||||||  || ||| ||||||| |    
T  3558767 tttttaatattaaaaaattgatatctaataatttaaagttattgatagttgattaatgggtcccatttatgaaatttgtgtgacatgctggattggaggg 3558866  T
Q  665 atttagtgcttattaggtact 685  Q
    ||| ||| |||||||| ||||    
T  3558867 attgagttcttattagatact 3558887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 494 - 542
Target Start/End: Complemental strand, 13420887 - 13420839
Alignment:
Q  494 gagaatctttttgagagtcttataagactaggggtcttacttaagaccc 542  Q
    |||||||||||| ||| |||||||||||| || ||||||||||||||||    
T  13420887 gagaatctttttcagaatcttataagacttggagtcttacttaagaccc 13420839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 608
Target Start/End: Complemental strand, 35463396 - 35463353
Alignment:
Q  566 ttttttaatattaaaaaattgaaa-ataatgatataaaattatt 608  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  35463396 ttttttgatattaaaaaattgaaacataatgatataaaattatt 35463353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 566 - 616
Target Start/End: Complemental strand, 14642345 - 14642295
Alignment:
Q  566 ttttttaatattaaaaaattgaaaataatgatataaaattattgatagttg 616  Q
    ||||||||||||||||| |  || ||||||||||||| |||||||||||||    
T  14642345 ttttttaatattaaaaattaaaatataatgatataaagttattgatagttg 14642295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 596 - 677
Target Start/End: Complemental strand, 33133346 - 33133264
Alignment:
Q  596 atataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgat-ctgaattggagtgatttagtgcttat 677  Q
    ||||||| ||||||||||||| ||||||  ||| ||||||||| |||||||| ||| |||| || ||| |||| |||||||||    
T  33133346 atataaagttattgatagttgattagtgagtcttatttaagaaatttgtgtgagatgctgagtttgagagattgagtgcttat 33133264  T

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Target: scaffold0991 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 524 - 645
Target Start/End: Complemental strand, 3054 - 2933
Alignment:
Q  524 ggggtcttacttaagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagt 622  Q
    ||||||||||||||||||| || | |||||| |||| |  | ||||||| |||||||||||||||| ||||||||||||||||||||||||| | |||||    
T  3054 ggggtcttacttaagaccctcaatcttaagcgggactcatattttttta-tattaaaaaattgaaatataatgatataaaattattgatagtggattagt 2956  T
Q  623 ggatctcatttaagaactttgtg 645  Q
    |  ||  ||||||||| ||||||    
T  2955 gtgtcctatttaagaaatttgtg 2933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 563 - 749
Target Start/End: Complemental strand, 31934 - 31744
Alignment:
Q  563 cacttttttaatattaaaaaattgaaaataatgatataaaattattgatagttgtttagtggatctcatttaagaactttgtgtgtgatctgaattggag 662  Q
    |||| ||||||||||||||| || || ||||| ||||||| |||||| |||||| ||| |   ||  ||||||||||||||||||  |||||  ||||||    
T  31934 cactcttttaatattaaaaatttaaatataatcatataaagttattgttagttgattacttagtcctatttaagaactttgtgtgaaatctgggttggag 31835  T
Q  663 tgatttagtgcttattaggtactgctattaaaaaattataaataaatgatgtt----catgagacccatttaagaaccaaaaaatgagtgt 749  Q
    | ||| | |||||||| | |||| ||||||| ||||||||||| | ||||||     |||||||||||||||| || | |||||| |||||    
T  31834 taattgaatgcttatttgatactactattaagaaattataaatgagtgatgtgaatacatgagacccatttaaaaatctaaaaataagtgt 31744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 458 - 587
Target Start/End: Complemental strand, 56011 - 55883
Alignment:
Q  458 tttaagactcggtacctattaggtaccttcaatggagagaatctttttgagagtcttataagactaggggtcttacttaagacccccacttttaagcagg 557  Q
    ||||||| ||| ||||||||||||||| ||| ||| ||||| ||||||||| |||||||| |||   |||||| ||||||||||| || | |||||  |     
T  56011 tttaagattcgatacctattaggtaccctcattggggagaaactttttgag-gtcttataggacccagggtctcacttaagaccctcattcttaagtgga 55913  T
Q  558 acccgcacttttttaatattaaaaaattga 587  Q
    || | |||| ||||||||||||||||||||    
T  55912 actcacactcttttaatattaaaaaattga 55883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 674 - 714
Target Start/End: Original strand, 59703 - 59743
Alignment:
Q  674 ttattaggtactgctattaaaaaattataaataaatgatgt 714  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  59703 ttattagatattgctattaaaaaattataaataaatgatgt 59743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 567 - 622
Target Start/End: Complemental strand, 6189 - 6133
Alignment:
Q  567 tttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagt 622  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||    
T  6189 tttttaatattaaaaaattgatatataataatataaaattattgatagttgattagt 6133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 567 - 622
Target Start/End: Complemental strand, 6207 - 6151
Alignment:
Q  567 tttttaatattaaaaaattgaaa-ataatgatataaaattattgatagttgtttagt 622  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||    
T  6207 tttttaatattaaaaaattgatatataataatataaaattattgatagttgattagt 6151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 535 - 653
Target Start/End: Complemental strand, 2232 - 2114
Alignment:
Q  535 taagacccccacttttaagcaggacccgcacttttttaatattaaaaaattgaaaataa-tgatataaaattattgatagttgtttagtggatctcattt 633  Q
    |||||||||||  ||||||  ||  ||||||  ||||||||||||||| |||||| | | ||||||||| ||||| ||||||| |||||| |||  ||||    
T  2232 taagacccccaactttaagtggggtccgcacacttttaatattaaaaa-ttgaaattcagtgatataaagttattaatagttgattagtgaatcctattt 2134  T
Q  634 aagaactttgtgtgtgatct 653  Q
    |||||||||||||| |||||    
T  2133 aagaactttgtgtgagatct 2114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 664 - 705
Target Start/End: Original strand, 63644 - 63685
Alignment:
Q  664 gatttagtgcttattaggtactgctattaaaaaattataaat 705  Q
    |||| ||| ||||||||||||| |||||||||||||||||||    
T  63644 gattgagtccttattaggtactactattaaaaaattataaat 63685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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