View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3056-3-Insertion-27 (Length: 46)
Name: NF3056-3-Insertion-27
Description: NF3056-3
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3056-3-Insertion-27 |
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| [»] chr2 (2 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 40; Significance: 0.00000000000001; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 14915007 - 14915046
Alignment:
| Q |
7 |
acaaatccacatgcatattcaatccatgtgatcccttgta |
46 |
Q |
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| T |
14915007 |
acaaatccacatgcatattcaatccatgtgatcccttgta |
14915046 |
T |
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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 14923498 - 14923537
Alignment:
| Q |
7 |
acaaatccacatgcatattcaatccatgtgatcccttgta |
46 |
Q |
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| T |
14923498 |
acaaatccacatgcatattcaatccatatgatcccttgta |
14923537 |
T |
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