View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3056-Insertion-14 (Length: 757)

Name: NF3056-Insertion-14
Description: NF3056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3056-Insertion-14
NF3056-Insertion-14
[»] chr7 (23 HSPs)
chr7 (333-757)||(6079974-6080393)
chr7 (179-459)||(35315890-35316168)
chr7 (177-370)||(33189923-33190115)
chr7 (177-372)||(25658428-25658622)
chr7 (192-461)||(26073199-26073466)
chr7 (199-468)||(47120-47387)
chr7 (192-461)||(26096986-26097253)
chr7 (177-348)||(36642648-36642819)
chr7 (227-370)||(527553-527694)
chr7 (255-386)||(7511188-7511316)
chr7 (177-279)||(33190107-33190209)
chr7 (179-276)||(47286-47383)
chr7 (177-325)||(32047274-32047422)
chr7 (184-276)||(35315890-35315982)
chr7 (177-276)||(26073372-26073471)
chr7 (177-276)||(26097159-26097258)
chr7 (179-276)||(527461-527558)
chr7 (177-241)||(32056667-32056730)
chr7 (169-227)||(6080057-6080115)
chr7 (706-752)||(35011881-35011927)
chr7 (589-627)||(18371817-18371855)
chr7 (226-279)||(7511157-7511210)
chr7 (177-234)||(32056863-32056920)
[»] chr3 (24 HSPs)
chr3 (177-445)||(46163881-46164146)
chr3 (177-463)||(32808192-32808482)
chr3 (179-455)||(26244901-26245175)
chr3 (179-463)||(12089033-12089316)
chr3 (198-369)||(55214101-55214272)
chr3 (143-455)||(33140328-33140646)
chr3 (179-463)||(43031169-43031446)
chr3 (208-370)||(3157795-3157956)
chr3 (177-445)||(26121992-26122259)
chr3 (179-370)||(45708482-45708674)
chr3 (179-370)||(2051602-2051792)
chr3 (177-276)||(32808189-32808289)
chr3 (177-276)||(2051508-2051607)
chr3 (179-277)||(26244204-26244302)
chr3 (189-276)||(33140329-33140416)
chr3 (179-278)||(43804114-43804213)
chr3 (177-276)||(55214006-55214105)
chr3 (179-276)||(45708669-45708766)
chr3 (177-276)||(46163860-46163958)
chr3 (175-276)||(36012642-36012743)
chr3 (177-236)||(7565632-7565690)
chr3 (179-245)||(43031381-43031447)
chr3 (189-248)||(26245115-26245174)
chr3 (179-276)||(12089032-12089129)
[»] chr4 (27 HSPs)
chr4 (142-370)||(45302458-45302687)
chr4 (177-463)||(51103405-51103689)
chr4 (191-370)||(4892440-4892617)
chr4 (179-370)||(4872589-4872778)
chr4 (194-370)||(35251443-35251619)
chr4 (179-370)||(22886555-22886746)
chr4 (179-370)||(22938219-22938410)
chr4 (179-370)||(43049141-43049332)
chr4 (177-370)||(40681571-40681759)
chr4 (194-355)||(54511373-54511534)
chr4 (199-372)||(34932121-34932292)
chr4 (219-370)||(42077156-42077308)
chr4 (177-269)||(35251621-35251713)
chr4 (179-263)||(39864133-39864217)
chr4 (177-276)||(4892612-4892711)
chr4 (177-276)||(51103593-51103692)
chr4 (179-276)||(54511541-54511638)
chr4 (577-622)||(56338226-56338271)
chr4 (193-276)||(4872773-4872856)
chr4 (179-276)||(43049327-43049421)
chr4 (186-276)||(45302373-45302463)
chr4 (586-622)||(2274396-2274432)
chr4 (181-212)||(35004517-35004548)
chr4 (177-244)||(42077066-42077133)
chr4 (179-276)||(22886460-22886560)
chr4 (179-276)||(22938124-22938224)
chr4 (190-232)||(36825070-36825112)
[»] chr8 (22 HSPs)
chr8 (179-451)||(42950397-42950667)
chr8 (181-370)||(41480641-41480830)
chr8 (175-345)||(34153370-34153539)
chr8 (175-445)||(38225494-38225762)
chr8 (179-463)||(42026987-42027269)
chr8 (179-463)||(5074295-5074576)
chr8 (175-370)||(11732728-11732925)
chr8 (177-279)||(38225473-38225575)
chr8 (177-276)||(5074480-5074579)
chr8 (177-264)||(7905674-7905761)
chr8 (189-370)||(23488640-23488820)
chr8 (143-276)||(23488925-23489065)
chr8 (223-370)||(42373289-42373436)
chr8 (177-276)||(23488815-23488913)
chr8 (292-370)||(18385858-18385936)
chr8 (175-276)||(16997132-16997235)
chr8 (179-276)||(42026986-42027083)
chr8 (314-370)||(16997230-16997286)
chr8 (177-276)||(11732634-11732733)
chr8 (177-276)||(42950382-42950481)
chr8 (580-633)||(6133509-6133562)
chr8 (190-279)||(18385779-18385866)
[»] chr1 (18 HSPs)
chr1 (171-370)||(4066917-4067113)
chr1 (177-370)||(34535330-34535523)
chr1 (177-463)||(33321076-33321360)
chr1 (181-370)||(49784654-49784847)
chr1 (263-463)||(27133979-27134177)
chr1 (221-370)||(23329431-23329581)
chr1 (242-346)||(38208437-38208541)
chr1 (179-276)||(27134081-27134178)
chr1 (179-279)||(27133862-27133962)
chr1 (179-276)||(33321264-33321361)
chr1 (185-276)||(49784570-49784659)
chr1 (177-276)||(23329337-23329436)
chr1 (177-264)||(34535535-34535622)
chr1 (182-276)||(38208302-38208396)
chr1 (179-269)||(4067115-4067204)
chr1 (177-225)||(2464189-2464237)
chr1 (182-241)||(2464100-2464159)
chr1 (191-236)||(7481190-7481235)
[»] chr2 (14 HSPs)
chr2 (177-445)||(36937545-36937809)
chr2 (238-395)||(29469629-29469784)
chr2 (181-370)||(26407536-26407725)
chr2 (177-370)||(29166839-29167032)
chr2 (177-276)||(26407442-26407541)
chr2 (177-276)||(36937731-36937830)
chr2 (177-276)||(29469556-29469657)
chr2 (179-248)||(18143965-18144034)
chr2 (190-270)||(25961135-25961215)
chr2 (311-363)||(25961223-25961275)
chr2 (182-275)||(29166748-29166843)
chr2 (580-633)||(26379647-26379700)
chr2 (177-212)||(30786444-30786479)
chr2 (252-338)||(30786351-30786432)
[»] chr6 (12 HSPs)
chr6 (183-370)||(10388265-10388452)
chr6 (177-463)||(67380-67664)
chr6 (180-370)||(30847668-30847858)
chr6 (177-276)||(67568-67667)
chr6 (177-308)||(30122751-30122871)
chr6 (177-308)||(3687665-3687799)
chr6 (190-370)||(16434938-16435114)
chr6 (177-276)||(16434845-16434943)
chr6 (179-276)||(3687821-3687918)
chr6 (297-351)||(30122481-30122535)
chr6 (177-230)||(6714532-6714585)
chr6 (188-236)||(35072422-35072470)
[»] chr5 (9 HSPs)
chr5 (179-386)||(20730451-20730653)
chr5 (177-367)||(36150869-36151059)
chr5 (193-445)||(13932619-13932866)
chr5 (208-360)||(8999597-8999750)
chr5 (191-276)||(13932788-13932873)
chr5 (177-236)||(17990784-17990843)
chr5 (177-263)||(36150773-36150860)
chr5 (177-231)||(22843783-22843837)
chr5 (191-240)||(22843894-22843943)
[»] scaffold0024 (2 HSPs)
scaffold0024 (177-276)||(70791-70890)
scaffold0024 (177-246)||(70629-70698)
[»] scaffold0081 (1 HSPs)
scaffold0081 (251-351)||(8564-8664)
[»] scaffold0912 (1 HSPs)
scaffold0912 (576-633)||(1854-1908)


Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 333 - 757
Target Start/End: Original strand, 6079974 - 6080393
Alignment:
Q  333 aatatccaaaagacattgaactattaacactcaaaatatacaaaagaatt-aataaagccagggatcagtttaaaaaatatttgacaaatacattgatta 431  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||  ||||||||| ||||| ||||||||||    
T  6079974 aatatacaaaagacattaaactattaacactcaaaatatacaaaagaatttaataaagtcagggttca-tttggaaaatatttaacaaagacattgatta 6080072  T
Q  432 ttttgagttattaacaaagtcagagaccaattcaatacaaagataagaaccaatttgataatttactcnnnnnnnnnnnttcatcatctttataactaaa 531  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||   ||||||| |||||||| |            ||||||||||| ||| |||||    
T  6080073 ttttgagttattaacagagtcagagaccaatttaatacaaagataaagtccaatttaataatttatt--aaaaaaaaaattcatcatcttcatatctaaa 6080170  T
Q  532 ccaaacattaataaacttcatcactaaactaaaagnnnnnnnntcaaaatattatcttcatcatcatacaaaattaacacaaatttaaacccaaaagtta 631  Q
    | ||||||||||||||||||||||||||  |||||        ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6080171 cgaaacattaataaacttcatcactaaaaaaaaagaaaaa---tcaaaatattatcttcatcatgatacaaaattaacacaaatttaaacccaaaagtta 6080267  T
Q  632 aaaaagaaatgcacatgttgtgaactgtgtgatagtgtttccaacgcttagccccgtcgcccttaccgccaccaagcttctccgatcaccgttgaggtac 731  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6080268 aaaaagaaatgcacatgttgtgaactgtgtgatagtgtttccaacgcttagccccgtcgcccttaccgccaccaagcttctccgatcaccgttgaggtac 6080367  T
Q  732 ggcttttattcttaagcatcttattg 757  Q
    ||||||||||||||||||||||||||    
T  6080368 ggcttttattcttaagcatcttattg 6080393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 179 - 459
Target Start/End: Complemental strand, 35316168 - 35315890
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||| |||||||||||  | ||||||||||||||||||||||||||    
T  35316168 aaattggtccctgactctattaataactcaaaatggtccctgtctttctcaaacgtttctcagattggtccctaactctattagttgttttgcattttaa 35316069  T
Q  279 ggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaaag 378  Q
    | || |||||||||||||||||| ||||||  ||||||||||||||||||||| ||||||||||||||||||    | |||||||||||  ||||||||     
T  35316068 gtcattaacgtatcaaataagatccaaaaggcattatgtcattaaccactaaaaaatatccaaaagacattgggtcaataacactcaaa--atacaaaac 35315971  T
Q  379 aattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagacc 459  Q
    || ||||| || |||||| || | | | ||| |||||||||| |||| || |||||||||||||||| | |||||| ||||    
T  35315970 aactaatagagtcagggagcaatctgagaaacatttgacaaagacatagactattttgagttattaatagagtcagggacc 35315890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 177 - 370
Target Start/End: Original strand, 33189923 - 33190115
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||  |||||||||||||||||||||||| | ||||||||| ||||| |||| |||||||||||  ||||||||||||||||||||||||||    
T  33189923 tcaaattggtctttgactctattaataactcaaaatggtatttgtctttatcaaaagtttctcagattggtccctgactctattagttgttttgcatttt 33190022  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    ||| |  ||||||| ||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||||   ||||||||| ||||||    
T  33190023 aagcctttaacgtaccaaataaga-tcaaaatgtattatgccattaaccactaaataatatccaaaagacattgagacattaacacttaaaata 33190115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 177 - 372
Target Start/End: Original strand, 25658428 - 25658622
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||||||||||| |||||||||||||||| || |||| |||||||||||||| |||||||| || | |||| |||||||||||||| |||||    
T  25658428 tcaaattggtccctgactctgttaataactcaaaatggtcattgtttttgtcaaacgtttatcagattgctcctcgactttattagttgttttgtatttt 25658527  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatata 372  Q
    ||| |||||| ||| |||||||||| ||||| | ||||||  |||| |||||||||||||| |||||||| |||||  ||||||||||||||||||    
T  25658528 aagccactaaagtaccaaataagatccaaaacacattatgcaattatccactaaataatat-caaaagacgttgaatcattaacactcaaaatata 25658622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 192 - 461
Target Start/End: Original strand, 26073199 - 26073466
Alignment:
Q  192 actctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgtat 291  Q
    |||||||||||||||||||||| ||  | |||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| || |||||||     
T  26073199 actctattaataactcaaaatggtcactttctttgtcaaacgtttctcagattggtccctgcctctattagttgttttgcattttaagccattaacgtac 26073298  T
Q  292 caaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaaagaattaataaagcc 391  Q
    |||||||||| ||||||  |||||  ||| ||||| |||||||||||||||| || |||||    |||||||||||  |||||||| ||||||||||| |    
T  26073299 caaataagatccaaaaggcattattccataaaccagtaaataatatccaaaacacgttgaatcgataacactcaaa--atacaaaacaattaataaaggc 26073396  T
Q  392 agggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagaccaa 461  Q
    || || || | ||| ||| |||||||||| |||  ||  ||||||| ||||||| | |||||| ||||||    
T  26073397 agagaccaatctaagaaacatttgacaaagacagagaccattttgaattattaatagagtcagggaccaa 26073466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 199 - 468
Target Start/End: Original strand, 47120 - 47387
Alignment:
Q  199 taataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgtatcaaataa 298  Q
    |||||| |||||||| | | ||| | |||||||||||| ||| |||||||||  |||||||||||||||||  |||||||| || |||||||||||||||    
T  47120 taataattcaaaatggtttctgtttctgtcaaacgtttctcaaattggtcatcaactctattagttgttttatattttaagtcattaacgtatcaaataa 47219  T
Q  299 gattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaaagaattaataaagccagggatc 398  Q
    ||||||||| | ||||| ||||||||||||||||||||| ||||||| ||||| |  ||||||||||||  |||||||| || ||||| |  |||||| |    
T  47220 gattcaaaatacattatatcattaaccactaaataatattcaaaagatattgagccgttaacactcaaa--atacaaaacaactaatagaatcagggacc 47317  T
Q  399 agtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagaccaattcaata 468  Q
    | | | |||||| || |||||| |||  ||| ||||||||||||||| | || || ||||||||| ||||    
T  47318 aatctgaaaaatgttcgacaaagacagagatcattttgagttattaatagagacaaagaccaatttaata 47387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 192 - 461
Target Start/End: Original strand, 26096986 - 26097253
Alignment:
Q  192 actctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgtat 291  Q
    |||||||||||||||||||||| ||  | |||||||||||||||| ||| |||||||  || |||||||||||||||||||||||||| || |||||||     
T  26096986 actctattaataactcaaaatggtcactttctttgtcaaacgtttctcaaattggtccctgcctctattagttgttttgcattttaagccattaacgtac 26097085  T
Q  292 caaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaaagaattaataaagcc 391  Q
    |||||||||| ||||||  |||||  ||| ||||| |||||||||||||||| || |||||    |||||||||||  |||||||| ||||||||||| |    
T  26097086 caaataagatccaaaaggcattattccataaaccagtaaataatatccaaaacacgttgaatcgataacactcaaa--atacaaaacaattaataaaggc 26097183  T
Q  392 agggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagaccaa 461  Q
    || || || | ||| ||| |||||||||| |||  ||  ||||||| ||||||| | |||||| ||||||    
T  26097184 agagaccaatctaagaaacatttgacaaagacagagaccattttgaattattaatagagtcagggaccaa 26097253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 177 - 348
Target Start/End: Original strand, 36642648 - 36642819
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||||||||||||||||||||||||| || |||| ||||||||||||| || ||| |||||||||  ||| | |||||||||||||||||||     
T  36642648 tcaaattggtccctgactctattaataactcaacatcatctctgtctttgtcaaaagtgttttagattggtccgtgaatgtattagttgttttgcattta 36642747  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacat 348  Q
    ||| || | || || ||||||| ||  |||| | ||||| ||||||||||||||||||||| ||||||||||    
T  36642748 aagccattgacataccaaataaaatctaaaatacattatatcattaaccactaaataatattcaaaagacat 36642819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 227 - 370
Target Start/End: Complemental strand, 527694 - 527553
Alignment:
Q  227 tcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaacca 326  Q
    |||||||||| |||||||||||  ||||||| ||| |||||||||||||| || || || |||| || |||||||||||||||  |||||||||||||||    
T  527694 tcaaacgtttctcagattggtctctgactct-ttaattgttttgcatttttagccattagcgta-cagataagattcaaaagacgttatgtcattaacca 527597  T
Q  327 ctaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    |||||||||||| |||| |||||||   ||||||||||||||||    
T  527596 ctaaataatatctaaaaaacattgagtcattaacactcaaaata 527553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 255 - 386
Target Start/End: Complemental strand, 7511316 - 7511188
Alignment:
Q  255 tctattagttgttttgcattttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaact 354  Q
    |||||||||| ||||| |||||||| || |||||||| |||||||||| ||||   |||||||||||||| |||||||||||| | ||||||||||||||    
T  7511316 tctattagttattttgtattttaagtcattaacgtataaaataagatttaaaaagcattatgtcattaactactaaataatattc-aaagacattgaact 7511218  T
Q  355 attaacactcaaaatatacaaaagaattaata 386  Q
    ||||||||| |||  |||||||| ||||||||    
T  7511217 attaacacttaaa--atacaaaacaattaata 7511188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 33190209 - 33190107
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||| ||| ||||||||||||||||||| |||||||| ||| ||||||||| ||| |||| |||||||||||  |||||||||||||||||||| |||||    
T  33190209 tcaatttgatccctgactctattaataattcaaaatggtctctgtctttgttaaatgtttctcagattggtctctgactctattagttgttttgtatttt 33190110  T
Q  277 aag 279  Q
    |||    
T  33190109 aag 33190107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 47383 - 47286
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||  || ||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||  ||| |||||||||||||||| |||||    
T  47383 aaattggtctttgtctctattaataactcaaaatgatctctgtctttgtcgaacatttttcagattggtccctgattctattagttgttttgtatttt 47286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 177 - 325
Target Start/End: Original strand, 32047274 - 32047422
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| ||| ||| |||  ||    |||||||||||||||||| |||||    
T  32047274 tcaaattggtctctgactctattaataactcaaaatggtctctgtctttgtcaaacttttctcatattattccccaactctattagttgttttgtatttt 32047373  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaacc 325  Q
    ||| || ||| ||| |||| ||| | ||||||  |||||| ||||||||    
T  32047374 aagccattaaggtaccaaaaaagttccaaaaggcattatgccattaacc 32047422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 35315890 - 35315982
Alignment:
Q  184 ggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||| |||| |||||||| ||  |||||||||||||||||||| |||||    
T  35315890 ggtccctgactctattaataactcaaaatagtctatgtctttgtcaaatgtttctcagattgctccctgactctattagttgttttgtatttt 35315982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 26073471 - 26073372
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||| | |||||||||  || || ||||| |||||||| |||||    
T  26073471 tcaatttggtccctgactctattaataattcaaaatggtctctgtctttgtcaaatgtttcttagattggtctctgcctttattaattgttttgtatttt 26073372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 26097258 - 26097159
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||| | |||||||||  || || ||||| |||||||| |||||    
T  26097258 tcaatttggtccctgactctattaataattcaaaatggtctctgtctttgtcaaatgtttcttagattggtctctgcctttattaattgttttgtatttt 26097159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 527461 - 527558
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||| ||| || ||||||||| |||| ||  ||| ||||||||||||| |||| |||||||||||| ||| | | |||||||||||| |||||    
T  527461 aaattggtctctgtctatattaataattcaagattgtctctgtctttgtcaaatgtttctcagattggtcagtgattttgttagttgttttgtatttt 527558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 32056667 - 32056730
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcag 241  Q
    |||| ||||||||| ||||||||||||||| |||||| |||||||||||||||||| ||| ||||    
T  32056667 tcaatttggtccct-actctattaataacttaaaatggtctttgtctttgtcaaacatttctcag 32056730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 6080115 - 6080057
Alignment:
Q  169 tctttgtatcaaattggtccctgactctattaataactcaaaatgatctttgtctttgt 227  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||| |||  |||||||||    
T  6080115 tctttgtattaaattggtctctgactctgttaataactcaaaataatcaatgtctttgt 6080057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 706 - 752
Target Start/End: Complemental strand, 35011927 - 35011881
Alignment:
Q  706 agcttctccgatcaccgttgaggtacggcttttattcttaagcatct 752  Q
    ||||||||||| |||||||||||||||||||||| || |||||||||    
T  35011927 agcttctccgaccaccgttgaggtacggcttttaatcctaagcatct 35011881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 589 - 627
Target Start/End: Original strand, 18371817 - 18371855
Alignment:
Q  589 tcatcatcatacaaaattaacacaaatttaaacccaaaa 627  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  18371817 tcatcatcatccaacattaacacaaatttaaacccaaaa 18371855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 7511157 - 7511210
Alignment:
Q  226 gtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaag 279  Q
    ||||||||||| |||||||||||  | ||||||||| |||||||| ||||||||    
T  7511157 gtcaaacgtttctcagattggtccctaactctattaattgttttgtattttaag 7511210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 32056920 - 32056863
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgt 234  Q
    |||| |||||||| |||| ||||||||||| |||||| | | ||||||||||||||||    
T  32056920 tcaatttggtcccggactttattaataacttaaaatggtttctgtctttgtcaaacgt 32056863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 6e-67; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 177 - 445
Target Start/End: Complemental strand, 46164146 - 46163881
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| |||||||  |||||||||||||||| |||||||||    
T  46164146 tcaaattagtccctgactctattaataactcaaaatggtctctgtctttgtcaaacgtttctcatattggtccctgactctattagttgtattgcatttt 46164047  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaa 376  Q
    ||| || ||||||| |||||||||| ||||||| |||||| ||||||| |||||||||||||||||||||||||| | |||||||||||||  |||||||    
T  46164046 aagccattaacgtaccaaataagatccaaaagacattatgccattaactactaaataatatccaaaagacattgagccattaacactcaaa--atacaaa 46163949  T
Q  377 agaattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaa 445  Q
    | |||||||| || || |||||| | | | ||| |||||||||| |||  ||  |||||||||||||||    
T  46163948 acaattaatagagtca-ggatcaatctgagaaacatttgacaaagacagggaccattttgagttattaa 46163881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 177 - 463
Target Start/End: Complemental strand, 32808482 - 32808192
Alignment:
Q  177 tcaaattggtccctgactctatta--ataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgtt---ttgc 271  Q
    |||||||||||| || ||||||||  ||||||||||||| ||| | |||||||||||||||| |||||||||||  |||||||||||||||||   ||||    
T  32808482 tcaaattggtccttggctctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgc 32808383  T
Q  272 attttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatat 371  Q
    |||||||| |  |||||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  32808382 attttaagcccttaacgtatcaaataagatccaaaagacattatgctattaaccactaaataatatccaaaagacattgaactattaacactcaaaata- 32808284  T
Q  372 acaaaagaattaataaagc-cagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagaccaatt 463  Q
     ||||| || ||||| ||  ||| || || ||| | ||| |||||||||| |||  ||| ||||||||||||||| | |||||| ||||||||    
T  32808283 -caaaacaactaatagaggtcagagaccaatttgagaaacatttgacaaagacagagatcattttgagttattaatagagtcagggaccaatt 32808192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 179 - 455
Target Start/End: Original strand, 26244901 - 26245175
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    |||||||||| |||||||||||||||  ||||||| ||| |||||||||||||  ||| |||||||||||| ||||||||||| |||||||| |||||||    
T  26244901 aaattggtccatgactctattaataaaacaaaatggtctctgtctttgtcaaatatttatcagattggtcagtgactctattaattgttttgtattttaa 26245000  T
Q  279 ggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaaag 378  Q
    | |||||| ||| |||||||||| ||||| | ||||||||||||||||||||||||||| |||||||||||||   |||| || |||||  |||| |||     
T  26245001 gtcactaatgtaccaaataagatccaaaaaacattatgtcattaaccactaaataatattcaaaagacattgagtcattaccattcaaa--atacgaaac 26245098  T
Q  379 aattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcaga 455  Q
    ||||| || ||  ||||| || | |||||||  ||| ||||| ||||  || ||||||||||||||| |||||||||    
T  26245099 aattattagagttagggaccaatctaaaaaacctttaacaaagacataaatcattttgagttattaataaagtcaga 26245175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 179 - 463
Target Start/End: Complemental strand, 12089316 - 12089033
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcatt-gactctattagttgtttt-gcatttt 276  Q
    |||||||| | |||||||||||||||||| ||| | ||  | |||||||||||| |||||||||||| ||    |||||||||||||||||| | |||||    
T  12089316 aaattggttcttgactctattaataactctaaagg-tccctctctttgtcaaacatttttcagattgatcccccgactctattagttgtttttgtatttt 12089218  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaa 376  Q
    ||| || |||||||||||||||||||| ||||  |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||  |||||||    
T  12089217 aagtcattaacgtatcaaataagattctaaaggcattatgacattaaccactaaataatatccaaaagacatttaaccattaacactcaaa--atacaaa 12089120  T
Q  377 agaattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagaccaatt 463  Q
    | || ||||| || | ||||  | | |||||||  ||||| ||||||||  |  ||||||| ||||||| |||||||| ||||||||    
T  12089119 acaactaatagagtcggggactaatctaaaaaaattttgataaatacatgaaccattttgaattattaataaagtcagggaccaatt 12089033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 198 - 369
Target Start/End: Complemental strand, 55214272 - 55214101
Alignment:
Q  198 ttaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgtatcaaata 297  Q
    |||||||||||||||||| | | |||||||||||| ||||| | ||||||| |  |||||||||||||||||| |||| |||  | |||| || ||||||    
T  55214272 ttaataactcaaaatgatttatatctttgtcaaacattttttaaattggtcttcaactctattagttgttttgtatttgaagtgattaacataccaaata 55214173  T
Q  298 agattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaat 369  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  55214172 agattcaaaagacattatgttattaaccactaaataatatccaaaagacattgaatcattaacactcaaaat 55214101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 143 - 455
Target Start/End: Complemental strand, 33140646 - 33140328
Alignment:
Q  143 tgagtaaaccactaaattgatccttgtctttgta--------tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgt 234  Q
    |||||||| |||||||||| ||||||||||||||        |||||||| || ||||||||||||||||||||||||| ||  |||||||||||||| |    
T  33140646 tgagtaaatcactaaattggtccttgtctttgtaccaaatgctcaaattgatctctgactctattaataactcaaaatggtcactgtctttgtcaaacat 33140547  T
Q  235 ttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataa 334  Q
    || |||||||||||   |||||| |||||| ||||| |||||||| || |||| || ||||||||||  |||||  ||||||||||||||   |||||||    
T  33140546 ttctcagattggtccccgactcttttagttattttgtattttaagtcattaacataccaaataagatcaaaaaggcattatgtcattaacggttaaataa 33140447  T
Q  335 tatccaaaagacattgaactattaacactcaaaatatacaaaagaattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattt 434  Q
    ||||||||||||||| |   |||||||||||||  |||||||| || ||||||||     || || ||| |||||| ||||||||| |||   || ||||    
T  33140446 tatccaaaagacattaagacattaacactcaaa--atacaaaataactaataaagttgatgaccaatttgaaaaatgtttgacaaagacaaaaatcattt 33140349  T
Q  435 tgagttattaacaaagtcaga 455  Q
    ||||||||||| | |||||||    
T  33140348 tgagttattaatagagtcaga 33140328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 179 - 463
Target Start/End: Original strand, 43031169 - 43031446
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    ||||||||| | |||||||||||||||| |||||| |||||||    ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  43031169 aaattggtcacggactctattaataacttaaaatggtctttgt----gtcaaacatttatcagattggtccttgactctattagttgttttgcattttaa 43031264  T
Q  279 ggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaac----tattaacactcaaaatataca 374  Q
    | || ||| ||||||||||| |||||||||| ||||||  ||||||||||||||||||||  ||||| | ||| |     ||||||| |||||  |||||    
T  43031265 gtcattaaagtatcaaataaaattcaaaagacattatgctattaaccactaaataatatcgcaaagatactgatccattaattaacattcaaa--ataca 43031362  T
Q  375 aaagaattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagaccaatt 463  Q
    ||| ||||||||      ||||||| | ||||||| |||||||||| ||| |||| ||||| ||||||||| | | ||||| |||||||    
T  43031363 aaacaattaata-----cgggatcaatctaaaaaacatttgacaaagacaatgatcattttaagttattaatagaatcagaaaccaatt 43031446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 208 - 370
Target Start/End: Complemental strand, 3157956 - 3157795
Alignment:
Q  208 aaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgtatcaaataagattcaaaa 307  Q
    |||||| ||| |||||||||||||| |||||||||||| |  |  |||||||||||||||||||||| |||| || |||| || |||||||||| |||||    
T  3157956 aaaatggtctctgtctttgtcaaacatttttcagattgattcta-actctattagttgttttgcattataagccattaacataccaaataagatccaaaa 3157858  T
Q  308 gatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    || ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  3157857 gacattatgtcattaatcactaaataatatccaaaaaacattgaaccattaacactcaaaata 3157795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 177 - 445
Target Start/End: Original strand, 26121992 - 26122259
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||| |||||||||||||||| ||||||| | | ||||||||||||| |||| | |||||||||  |||||||||||||||||||| |||||    
T  26121992 tcaaattggtccatgactctattaataacacaaaatggtatctgtctttgtcaaatgtttcttagattggtccatgactctattagttgttttgtatttt 26122091  T
Q  277 aaggcactaacgtatcaaataagattc-aaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaa 375  Q
    ||  || ||| ||| |||||||||| | |||| | | | | |||||||||||||||||||||||||||||||||||   |||| ||||||||  |||| |    
T  26122092 aaatcattaatgtaccaaataagatccaaaaaaacactctctcattaaccactaaataatatccaaaagacattgagtcattaccactcaaa--atacca 26122189  T
Q  376 aagaattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaa 445  Q
    || ||||| || ||  ||||| || | |||||||| ||||||||| ||||  || ||||| |||||||||    
T  26122190 aacaattattagagttagggaccaatctaaaaaatgtttgacaaaaacataaatcattttaagttattaa 26122259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 179 - 370
Target Start/End: Original strand, 45708482 - 45708674
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaa-tgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttta 277  Q
    ||||||||| || |||||||||||||||||||| ||||   |||||||||||||||||| |||||||||||   | ||||||||||| ||||| ||||||    
T  45708482 aaattggtctctaactctattaataactcaaaaatgattcatgtctttgtcaaacgtttctcagattggtctccgtctctattagttcttttgtatttta 45708581  T
Q  278 aggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    || ||  |||||| |||||||||| ||||| | |||||||||||||| ||||||||||||| ||||||||||||   ||||||| ||||||||    
T  45708582 agtcatcaacgtaccaaataagatccaaaaaaaattatgtcattaacgactaaataatatctaaaagacattgagtcattaacagtcaaaata 45708674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 179 - 370
Target Start/End: Complemental strand, 2051792 - 2051602
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    |||||||||| ||||| |||||||||||||||||  ||  ||| ||| |||||| |||| || ||||||     ||||||||| |||||||| |||||||    
T  2051792 aaattggtccatgactttattaataactcaaaatagtccctgtttttatcaaacatttt-catattggtttccaactctattaattgttttgtattttaa 2051694  T
Q  279 ggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    | || ||||||| |||||||||| ||||||| ||||||| || |||||||||||| |||| ||||| |||||||| |||||| |||||||||    
T  2051693 gccattaacgtaccaaataagatccaaaagacattatgttatcaaccactaaatattatctaaaaggcattgaaccattaaccctcaaaata 2051602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 32808189 - 32808289
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattga-ctctattagttgttttgcattt 275  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||| |||||||  ||| ||||||||||||||||| ||||    
T  32808189 tcaaattggtccctgactctattaataactcaaaatgatctctgtctttgtcaaatgtttctcaaattggtctctgacctctattagttgttttgtattt 32808288  T
Q  276 t 276  Q
    |    
T  32808289 t 32808289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 2051508 - 2051607
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||| |||||||| |||||||||||||||| || || |||||||||||||||| ||| |||||||||||  |||||||||||||||| |||||    
T  2051508 tcaaattggtctctgactctgttaataactcaaaatggtccttatctttgtcaaacgtttctcatattggtcattgtttctattagttgttttgtatttt 2051607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 26244204 - 26244302
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttta 277  Q
    |||||| ||| |||||||||||||||| ||||||| ||| |||||||||| || |||| ||||||||||| ||||||||||||||||||||| ||||||    
T  26244204 aaattgatccatgactctattaataacacaaaatggtctctgtctttgtccaatgtttctcagattggtccttgactctattagttgttttgtatttta 26244302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 33140329 - 33140416
Alignment:
Q  189 ctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||  ||| |||||||| ||||| |||||    
T  33140329 ctgactctattaataactcaaaatgatttttgtctttgtcaaacatttttcaaattggtcatcaactttattagttattttgtatttt 33140416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 43804213 - 43804114
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    |||||||||| | ||| ||||||||| |||||||| || |||||||||||||| |||| |||||||||||  ||| |||||||||||||||| |||||||    
T  43804213 aaattggtccttaactttattaataattcaaaatggtcattgtctttgtcaaatgtttctcagattggtctctgaatctattagttgttttgtattttaa 43804114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 55214006 - 55214105
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||  |||| |||||||||||||||||||| ||   ||||||||||||||||| ||| |||||||   |||||||||||| ||||||||||||    
T  55214006 tcaaattggtatctgaatctattaataactcaaaatggtcaaggtctttgtcaaacgtttctcaaattggtctccgactctattagtggttttgcatttt 55214105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 45708766 - 45708669
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||| |||||| | ||||||||||||||||  || |||||||||||||||||  ||| |||||||  |||||| ||||||||||||| |||||    
T  45708766 aaattggtcactgactatgttaataactcaaaatggcctctgtctttgtcaaacgttcctcaaattggtctctgactcgattagttgttttgtatttt 45708669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 46163860 - 46163958
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||| |||||||  ||||||||||||||||||||||| ||  ||||||||||||| |||| |||||||| ||  ||||||||||| |||||||| |||||    
T  46163860 tcaatttggtccgcgactctattaataactcaaaatggtccctgtctttgtcaaatgtttctcagattgatc-ctgactctattaattgttttgtatttt 46163958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 36012743 - 36012642
Alignment:
Q  175 tatcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatt 274  Q
    |||||||||| || ||||||||||||||||||||||||| ||  ||||||| |||||||||| ||| ||||||   |||   |||||||||||||| |||    
T  36012743 tatcaaattgatctctgactctattaataactcaaaatggtccctgtctttttcaaacgtttctcaaattggttcctgatcttattagttgttttgtatt 36012644  T
Q  275 tt 276  Q
    ||    
T  36012643 tt 36012642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 7565632 - 7565690
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgttt 236  Q
    ||||||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||    
T  7565632 tcaaattggtccc-gactctattaataactcaaaatgatatctatctttgtcaaacgttt 7565690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 43031447 - 43031381
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattg 245  Q
    ||||||||  |||| ||||||||||||| ||||||||| |||||||||||||| |||||| ||||||    
T  43031447 aaattggtttctgattctattaataacttaaaatgatcattgtctttgtcaaatgttttttagattg 43031381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 26245174 - 26245115
Alignment:
Q  189 ctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtc 248  Q
    |||||| |||||||||||||||||||| | ||||||||| ||| |||||| |||||||||    
T  26245174 ctgactttattaataactcaaaatgatttatgtctttgttaaaggttttttagattggtc 26245115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 12089032 - 12089129
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||||||| ||||||||| |||||||| |   ||| ||| |||||  ||||| ||||| |||   ||||||||||||||||||| |||||    
T  12089032 aaattggtccctgactttattaataattcaaaatggttcatgtatttatcaaaatttttttagattagtccccgactctattagttgttttgtatttt 12089129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 8e-60; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 142 - 370
Target Start/End: Complemental strand, 45302687 - 45302458
Alignment:
Q  142 ttgagtaaaccactaaattgatccttgtctttgtatcaaattggt-ccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttca 240  Q
    |||||||||||||||||||| | | ||||||||||| |||||  | |||||||| ||||||||| |||||||| | | |||||||||||||| |||||||    
T  45302687 ttgagtaaaccactaaattggttcatgtctttgtattaaattctttccctgactttattaataattcaaaatggtttctgtctttgtcaaacatttttca 45302588  T
Q  241 gattggtcattgactctattagttgttttgcattttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatcca 340  Q
     |||||||  ||||||||||||||||||||||||||||| || |||| |||||||||||||||||||   |||||| ||||||||||| |||||||||||    
T  45302587 tattggtccctgactctattagttgttttgcattttaagtcattaacatatcaaataagattcaaaatgcattatgacattaaccactgaataatatcca 45302488  T
Q  341 aaagacattgaactattaacactcaaaata 370  Q
    ||||||| || ||||||||| |||||||||    
T  45302487 aaagacactggactattaacgctcaaaata 45302458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 177 - 463
Target Start/End: Original strand, 51103405 - 51103689
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||||||||||||||||||| |||||||| || ||| |||||||||| |||| || |||||||| |  |||||||||||| ||||| |||||    
T  51103405 tcaaattggtccctgactctattaataattcaaaatggtcattgcctttgtcaaaagtttctcggattggtcttcaactctattagttcttttgtatttt 51103504  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaa 376  Q
    ||| || || |||| |||||||||  ||||||  ||||| || | |||||||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  51103505 aagtcattagcgtaccaaataagacccaaaaggcattatatcctcaaccactaaataatatccaaaagacattgaaccattaacactcaaa--atacaaa 51103602  T
Q  377 agaattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagaccaatt 463  Q
    | || ||||| |  || | | || ||| | |||| ||||| ||| |||  || |||||||||||||||| | |||||| ||||||||    
T  51103603 acaactaatagaatcatgaaccaatttgagaaatgtttgataaagacagagactattttgagttattaatagagtcagtgaccaatt 51103689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 191 - 370
Target Start/End: Original strand, 4892440 - 4892617
Alignment:
Q  191 gactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgta 290  Q
    ||||||||||||||||||||||| |   |||||||||||||| ||| | |||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  4892440 gactctattaataactcaaaatggttactgtctttgtcaaacatttcttagattggtccctgactctattagttgttttgcattttaagccactaacgta 4892539  T
Q  291 tcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
     |||||||||| ||||| | ||  || |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  4892540 ccaaataagatccaaaaaacat--tgccattaaacactaaataatatccaaaagacagtgaaccattaacactcaaaata 4892617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 179 - 370
Target Start/End: Original strand, 4872589 - 4872778
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    |||||| || || |||||||||||||||||||||||||| |||||||||||||||||| | |||||| ||  ||||||||||||||||||||||| ||||    
T  4872589 aaattgatctctaactctattaataactcaaaatgatctctgtctttgtcaaacgtttct-agattgatccctgactctattagttgttttgcatattaa 4872687  T
Q  279 ggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    | || |||||||  ||||||||||||||||| ||| || ||||| |||||||||||||| ||||||||||||| | |||||||| |||||||    
T  4872688 gtcattaacgtactaaataagattcaaaagacatt-tgccattagccactaaataatatacaaaagacattgagccattaacacccaaaata 4872778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 194 - 370
Target Start/End: Original strand, 35251443 - 35251619
Alignment:
Q  194 tctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgtatca 293  Q
    |||||||||||||||||||| | | |||||||||||||  ||||| |||||| ||  |||| ||||||||| |||||||||||||| || |||  || ||    
T  35251443 tctattaataactcaaaatggtttatgtctttgtcaaatattttttagattgatctctgacgctattagttattttgcattttaagtcattaagatacca 35251542  T
Q  294 aataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    |||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  35251543 aataagatccaaaagacattacgtcattaaccactaaataatatccaaaagacattgagttattaacactcaaaata 35251619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 179 - 370
Target Start/End: Complemental strand, 22886746 - 22886555
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    |||||||||  ||||||||||||||| |||||||  | | | |||||||||||||||||| ||||||||| | |||||||||| |||||||| |||||||    
T  22886746 aaattggtctttgactctattaataattcaaaatagtttctatctttgtcaaacgttttttagattggtcttcgactctattacttgttttgtattttaa 22886647  T
Q  279 ggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    | || ||||||| |||||||||| ||||| | ||||| ||||||||||||||||||||| ||||||||||||| | || |||||| ||||||    
T  22886646 gtcattaacgtaacaaataagatccaaaacacattatatcattaaccactaaataatattcaaaagacattgagccatgaacactaaaaata 22886555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 179 - 370
Target Start/End: Complemental strand, 22938410 - 22938219
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    |||||||||  ||||||||||||||| |||||||  | | | |||||||||||||||||| ||||||||| | |||||||||| |||||||| |||||||    
T  22938410 aaattggtctttgactctattaataattcaaaatagtttctatctttgtcaaacgttttttagattggtcttcgactctattacttgttttgtattttaa 22938311  T
Q  279 ggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    | || ||||||| |||||||||| ||||| | ||||| ||||||||||||||||||||| ||||||||||||| | || |||||| ||||||    
T  22938310 gtcattaacgtaacaaataagatccaaaacacattatatcattaaccactaaataatattcaaaagacattgagccatgaacactaaaaata 22938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 179 - 370
Target Start/End: Original strand, 43049141 - 43049332
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    |||||||||  ||| |||||||||||||||||||| ||  | |||||||||| | ||||||| ||||||    |||||||||| |||||||| |||||||    
T  43049141 aaattggtcggtgagtctattaataactcaaaatggtccctatctttgtcaagcttttttcaaattggtgcccgactctattaattgttttgtattttaa 43049240  T
Q  279 ggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    | || ||| ||||||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  43049241 gtcattaatgtatcaaataagatctaaaaggcattatgtcattaaccactaaataatatccaaaagacattgaactattaacattaaaaata 43049332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 177 - 370
Target Start/End: Complemental strand, 40681759 - 40681571
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||||||| ||||||||||||| |||||| ||     ||||||| ||||||||| | |||||||   |||| |||||||| ||||| |||||    
T  40681759 tcaaattggtccctgattctattaataacttaaaatggtc-----ctttgtcgaacgttttttaaattggtccccgactgtattagttattttgtatttt 40681665  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    ||| || ||| ||||||| |||||||||||||| ||||||||| | |||| ||||||||||||| |||||||||| ||||||||||||||||||    
T  40681664 aagtcattaatgtatcaattaagattcaaaagacattatgtcactgaccattaaataatatccataagacattgagctattaacactcaaaata 40681571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 194 - 355
Target Start/End: Original strand, 54511373 - 54511534
Alignment:
Q  194 tctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgtatca 293  Q
    |||||||||||||||||||  ||||| ||||||||||  |||||| |||||||||   ||||||||||||| ||||| |||||||  || ||||||||||    
T  54511373 tctattaataactcaaaatagtctttatctttgtcaattgttttttagattggtctccgactctattagttcttttgtattttaaatcattaacgtatca 54511472  T
Q  294 aataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaacta 355  Q
     ||||||| ||||||||||||| |||||||| ||||||||||||||||||||| ||||||||    
T  54511473 gataagatccaaaagatattatatcattaacgactaaataatatccaaaagacgttgaacta 54511534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 199 - 372
Target Start/End: Original strand, 34932121 - 34932292
Alignment:
Q  199 taataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgtatcaaataa 298  Q
    ||||||||||||||| | |  |||||||||||| |||| ||| |||||||    |||||||||||| ||||| |||||||  || ||| |||||||||||    
T  34932121 taataactcaaaatggtgt--gtctttgtcaaatgtttatcatattggtctcaaactctattagttcttttgtattttaactcattaatgtatcaaataa 34932218  T
Q  299 gattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatata 372  Q
    ||| ||||||  ||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  34932219 gatccaaaaggcattatatcattaaccactaaataatattcaaaagacattgagccattaacactcaaaatata 34932292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 219 - 370
Target Start/End: Complemental strand, 42077308 - 42077156
Alignment:
Q  219 tgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt-aaggcactaacgtatcaaataagattcaaaagatattatgt 317  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| || ||| |||  |||||||||  ||||   ||||||     
T  42077308 tgtctttgtcaaacgtttttcagattggtcatcgactctattagttgttttgtattttgaagtcattaatgtactaaataagatcgaaaatgcattatgc 42077209  T
Q  318 cattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
     ||||| ||||||||||||| ||||| ||||||| | |||| |||||||||||    
T  42077208 tattaatcactaaataatattcaaaaaacattgagccattatcactcaaaata 42077156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 177 - 269
Target Start/End: Complemental strand, 35251713 - 35251621
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgtttt 269  Q
    |||| ||||||||| ||||||||||||||| | |||| ||||||||||| ||||| |||| |||||||||||  |||||||||||||||||||    
T  35251713 tcaatttggtccctaactctattaataacttataatggtctttgtctttctcaaatgtttctcagattggtctctgactctattagttgtttt 35251621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 39864133 - 39864217
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagt 263  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||| ||| |||||||  || ||||||||||    
T  39864133 aaattggtccccgactctattaataactcaaaatgatccctgtctttgtcaaacttttctcatattggtctctgtctctattagt 39864217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 4892711 - 4892612
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||| |||||||| ||||||||| | || |||||||| ||||||||||||| ||| |||| |||||||||||   ||||||||||||||||||| |||||    
T  4892711 tcaatttggtcccagactctatttacaattcaaaatggtctttgtctttgtgaaatgtttctcagattggtccacgactctattagttgttttgtatttt 4892612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 51103692 - 51103593
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||| ||||||||||||||||||||||||  ||| ||||||| |||||| ||| ||| ||||||   ||| |||||||||||||||| |||||    
T  51103692 tcaaattggtcactgactctattaataactcaaaatagtctctgtctttatcaaacatttctcaaattggttcatgattctattagttgttttgtatttt 51103593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 54511638 - 54511541
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||  || ||||||||||| |||||||| ||| | |||| ||||||||||||| | |||||||  |||||||||||| ||||||| |||||    
T  54511638 aaattggtccacgaatctattaataattcaaaatggtctatatcttagtcaaacgttttttaaattggtccctgactctattagctgttttgtatttt 54511541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 577 - 622
Target Start/End: Complemental strand, 56338271 - 56338226
Alignment:
Q  577 aaaatattatcttcatcatcatacaaaattaacacaaatttaaacc 622  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  56338271 aaaatattatcttcatcatcatataaaattaacacaaatttaaacc 56338226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 193 - 276
Target Start/End: Complemental strand, 4872856 - 4872773
Alignment:
Q  193 ctctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||||| |||||||||| ||||||| | ||  |||| ||| |||||||  |||||||||||||||||||| |||||    
T  4872856 ctctattaataacttaaaatgatctctgtctttatgaagtgtttctcatattggtctctgactctattagttgttttgtatttt 4872773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 43049421 - 43049327
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||| || |||| ||||||||||| |||||||| |   ||| |||||||||||||| |||||||| ||  |||||||||||||||||||| |||||    
T  43049421 aaattgatctctgagtctattaataattcaaaatggt---tgtttttgtcaaacgtttctcagattgatctctgactctattagttgttttgtatttt 43049327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 45302373 - 45302463
Alignment:
Q  186 tccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||| |||||| |||||||  ||  ||||||||| ||| |||| ||| |||||||  | |||||||||||||||||| |||||    
T  45302373 tccctgactctactaataattcaaaatattcactgtctttgtgaaatgtttctcaaattggtctctaactctattagttgttttgtatttt 45302463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 586 - 622
Target Start/End: Original strand, 2274396 - 2274432
Alignment:
Q  586 tcttcatcatcatacaaaattaacacaaatttaaacc 622  Q
    ||||||||||||| |||||||||||||||||||||||    
T  2274396 tcttcatcatcatccaaaattaacacaaatttaaacc 2274432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 212
Target Start/End: Original strand, 35004517 - 35004548
Alignment:
Q  181 attggtccctgactctattaataactcaaaat 212  Q
    ||||||||||||||||||||||||||||||||    
T  35004517 attggtccctgactctattaataactcaaaat 35004548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 42077066 - 42077133
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagatt 244  Q
    |||||||||||| ||||| ||||||||||||||| |||| | | ||||||||| | |||||| |||||    
T  42077066 tcaaattggtccttgactttattaataactcaaattgatgtatatctttgtcagaagttttttagatt 42077133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 22886460 - 22886560
Alignment:
Q  179 aaattggtccctgactctattaat---aactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattt 275  Q
    |||||||| ||||||| |||||||   ||||||||||  |  |||||||||||||| |||| ||||||| |||  | | |||||||||||||||| ||||    
T  22886460 aaattggttcctgactttattaataataactcaaaatagtacttgtctttgtcaaatgtttctcagattagtctctaattctattagttgttttgtattt 22886559  T
Q  276 t 276  Q
    |    
T  22886560 t 22886560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 22938124 - 22938224
Alignment:
Q  179 aaattggtccctgactctattaat---aactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattt 275  Q
    |||||||| ||||||| |||||||   ||||||||||  |  |||||||||||||| |||| ||||||| |||  | | |||||||||||||||| ||||    
T  22938124 aaattggttcctgactttattaataataactcaaaatagtacttgtctttgtcaaatgtttctcagattagtctctaattctattagttgttttgtattt 22938223  T
Q  276 t 276  Q
    |    
T  22938224 t 22938224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 36825112 - 36825070
Alignment:
Q  190 tgactctattaataactcaaaatgatctttgtctttgtcaaac 232  Q
    |||||||||||||||||||||||||||| | ||||| ||||||    
T  36825112 tgactctattaataactcaaaatgatctatatctttatcaaac 36825070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 2e-57; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 179 - 451
Target Start/End: Complemental strand, 42950667 - 42950397
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    |||| |||| ||||||||||||||||||||||||| || ||||||||||||||| ||| ||| |||| ||  ||||||||||||||||||| ||||||||    
T  42950667 aaataggtctctgactctattaataactcaaaatggtcattgtctttgtcaaacatttctcatattgatctctgactctattagttgttttacattttaa 42950568  T
Q  279 ggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaaag 378  Q
    |  | |||||||||||||||||| ||||||| ||||||| |||| |||||||||||||| ||||||||||||||| |||||||||||||  ||||||||     
T  42950567 gttattaacgtatcaaataagatccaaaagacattatgttattagccactaaataatattcaaaagacattgaaccattaacactcaaa--atacaaaac 42950470  T
Q  379 aattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagt 451  Q
    |||||| | ||  ||||| || | | | ||| |||||||||   ||| ||| ||||||||||||||| |||||    
T  42950469 aattaacagagttagggaccaatctgagaaacatttgacaacggcatagatcattttgagttattaataaagt 42950397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 181 - 370
Target Start/End: Complemental strand, 41480830 - 41480641
Alignment:
Q  181 attggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaagg 280  Q
    |||| ||||||||| |||||||||||||||||| |   |||||||||||||| ||||||| |||| || ||||||||||||||||||||| ||||||||     
T  41480830 attgttccctgactttattaataactcaaaatggttactgtctttgtcaaacatttttcatattgatccttgactctattagttgttttgtattttaagt 41480731  T
Q  281 cactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    || ||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||   ||||||||||||||||    
T  41480730 cattaacgtaccaaataagattcgaaagatattatgccattaaccactaaataatattcaaaagacattgagtcattaacactcaaaata 41480641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 175 - 345
Target Start/End: Complemental strand, 34153539 - 34153370
Alignment:
Q  175 tatcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatt 274  Q
    |||||||||||||  |||||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||  |||||||||||| ||||||||||||    
T  34153539 tatcaaattggtctatgactctattaataactcaaaatgat-tatgtctttgtcaaacgtttctcaaattggttcttgactctattaattgttttgcatt 34153441  T
Q  275 ttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaaga 345  Q
    ||||| || ||| |||||||||||||| |||||   |||||| ||||||||||||||||||||||||||||    
T  34153440 ttaagccattaatgtatcaaataagatccaaaatgcattatgccattaaccactaaataatatccaaaaga 34153370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 175 - 445
Target Start/End: Complemental strand, 38225762 - 38225494
Alignment:
Q  175 tatcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatt 274  Q
    |||||||||||||||||||||||||||||| | |||||| |   |||||||||||||| ||  ||| |||||||  ||||||||||| ||||||||||||    
T  38225762 tatcaaattggtccctgactctattaataatttaaaatggttcatgtctttgtcaaacattcctcatattggtccctgactctattatttgttttgcatt 38225663  T
Q  275 ttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatataca 374  Q
    ||||| || | ||| | |||||| ||| |||||| ||||||||||||||| ||| |||||||||||||||||||||| | ||||||||| |||||   ||    
T  38225662 ttaagtcattgacgcaccaaataggatccaaaaggtattatgtcattaacaactgaataatatccaaaagacattgagccattaacacttaaaatg--ca 38225565  T
Q  375 aaagaattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaa 445  Q
    ||| || ||||| || ||| || || | | |||||||||||||||||||   ||  |||||||||||||||    
T  38225564 aaacaactaatagagtcagagaccaatctgaaaaatatttgacaaataccaagaccattttgagttattaa 38225494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 179 - 463
Target Start/End: Complemental strand, 42027269 - 42026987
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    ||||||||| |||||||||||||||||| |||||| |  ||||||||||||||  ||| ||| |||| ||    ||||||||| ||| |||  |||||||    
T  42027269 aaattggtctctgactctattaataacttaaaatggttcttgtctttgtcaaatctttctcaaattgatccccaactctattaattgatttatattttaa 42027170  T
Q  279 ggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaaag 378  Q
    | || ||| |||||||||||||| ||||||  |||||||||| ||||||||||||||||||||||||||||||   ||||| |||||||  ||||||||     
T  42027169 gtcattaatgtatcaaataagatccaaaaggcattatgtcataaaccactaaataatatccaaaagacattgagtcattaaaactcaaa--atacaaaac 42027072  T
Q  379 aattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagaccaatt 463  Q
    |||||||| || || |||||| ||| | |||  ||||||||| ||    |  ||||||||||||||| |||||| | ||||||||    
T  42027071 aattaatagagtcacggatcaatttgagaaaggtttgacaaagacgaaaaacattttgagttattaataaagtcggggaccaatt 42026987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 179 - 463
Target Start/End: Original strand, 5074295 - 5074576
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    |||||||||| | ||||||| ||||||||||||| |||| ||||||||||||| |||| ||| |||| ||   || | |||||| ||||||| |||||||    
T  5074295 aaattggtcc-taactctatgaataactcaaaataatctctgtctttgtcaaatgtttctcaaattgatccccgattttattagctgttttgtattttaa 5074393  T
Q  279 ggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaaag 378  Q
      || ||||||| |||||| |||  | |||  |||||| |||||||||| |||||||||||||||||||||||   |||||||||||||  ||||||||     
T  5074394 accattaacgtaccaaatatgatcgagaaggcattatgccattaaccaccaaataatatccaaaagacattgagtcattaacactcaaa--atacaaaac 5074491  T
Q  379 aattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagaccaatt 463  Q
    || ||||| || |||| | || | | ||||| |||||||||| |||  ||  ||||||||||||||| | || ||| ||||||||    
T  5074492 aactaatagagtcaggaaccaatctgaaaaacatttgacaaagacagggaccattttgagttattaatagagacagggaccaatt 5074576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 175 - 370
Target Start/End: Complemental strand, 11732925 - 11732728
Alignment:
Q  175 tatcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttg--ca 272  Q
    ||||| ||| ||||||||||||| |||||||||||||||  | |||||||| ||||  |||| ||| |||||||  ||||||||||| || ||||   ||    
T  11732925 tatcatattagtccctgactctagtaataactcaaaatggccattgtctttatcaagtgtttctcaaattggtccctgactctattaatttttttttaca 11732826  T
Q  273 ttttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    ||||||| || ||||||| |||||||||| |||||   |||||| |||||||||||||||||||| |||| || |||||   ||||||||||||||||    
T  11732825 ttttaagccattaacgtaccaaataagatccaaaatgcattatgccattaaccactaaataatattcaaatgatattgagtcattaacactcaaaata 11732728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 38225473 - 38225575
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||| ||||||||| |||||||||||||||||||||| |||| || |||||||||  |||||||||||||||  ||||||||||||||||||||||||||    
T  38225473 tcaatttggtcccttactctattaataactcaaaatggtcttggtatttgtcaaatatttttcagattggtctctgactctattagttgttttgcatttt 38225572  T
Q  277 aag 279  Q
    |||    
T  38225573 aag 38225575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 5074579 - 5074480
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||| |||||||||||||||   |||||||||||||||||||| |||||    
T  5074579 tcaaattggtccctgtctctattaataactcaaaatggtccctgtctttgtcaaatgtttttcagattggttcctgactctattagttgttttgtatttt 5074480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 177 - 264
Target Start/End: Original strand, 7905674 - 7905761
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagtt 264  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  || |||||||||||    
T  7905674 tcaaattagtccctgactctattaataactcaaaatgatctctgtctttatcaaacgtttttcagattggtccctggctctattagtt 7905761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 189 - 370
Target Start/End: Original strand, 23488640 - 23488820
Alignment:
Q  189 ctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacg 288  Q
    |||| ||||| |||||||||||||| |   || |||||||||| |||| | |||||| |  |  ||||| |||||||||||| |||| ||| || |||||    
T  23488640 ctgattctatgaataactcaaaatggttcctgactttgtcaaatgtttcttagattgattctatactctcttagttgttttgtattt-aagtcattaacg 23488738  T
Q  289 tatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    |||||||||||||  ||||   ||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||    
T  23488739 tatcaaataagatctaaaaaccattatgtcactaaccactaaataatatccaaaagacattgagtcattaacactcaaaata 23488820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 143 - 276
Target Start/End: Complemental strand, 23489065 - 23488925
Alignment:
Q  143 tgagtaaaccactaaattgatccttgtctttgta--------tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgt 234  Q
    |||||||| ||| |||||||||||||||||||||        |||||||||||| ||||||||| |||||||||||||| || |||||||||||||| ||    
T  23489065 tgagtaaatcaccaaattgatccttgtctttgtaccaaattctcaaattggtccatgactctatgaataactcaaaatggtcattgtctttgtcaaatgt 23488966  T
Q  235 ttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    || ||| ||||||| ||||||||||||| ||||||| |||||    
T  23488965 ttctcaaattggtccttgactctattag-tgttttgtatttt 23488925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 370
Target Start/End: Original strand, 42373289 - 42373436
Alignment:
Q  223 tttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgtatcaaataagattcaaaagatattatgtcatta 322  Q
    |||||||||||||| ||| |||||||  ||||| ||||| |||||||| |||||||| || |||| |||||||||| || ||||||| |||||  ||| |    
T  42373289 tttgtcaaacgtttctcacattggtccctgactttattaattgttttgtattttaagtcattaacatatcaaataacatccaaaagacattattccatga 42373388  T
Q  323 accactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    |||| ||||||||||  |||| | ||||||| ||||||||||||||||    
T  42373389 accattaaataatatttaaaaaatattgaaccattaacactcaaaata 42373436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 23488913 - 23488815
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||||||||||||| ||||| |||||||| ||| |||||||||||||  ||| ||||||||||| ||||||||||||| ||||||| |||||    
T  23488913 tcaaattggtccctgactctatgaataattcaaaatggtctctgtctttgtcaaatatttctcagattggtccttgactctattag-tgttttgtatttt 23488815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 292 - 370
Target Start/End: Complemental strand, 18385936 - 18385858
Alignment:
Q  292 caaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||   ||||||||| ||||||    
T  18385936 caaataagattcaaaagacattatgtcattaaccactaaataatattcaaaagatattgagtcattaacacttaaaata 18385858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 16997132 - 16997235
Alignment:
Q  175 tatcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtc--attgactctattagttgttttgca 272  Q
    |||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| |||| |||  ||||||    |||||||||||||||||||| |    
T  16997132 tatcaatttggttcctaactctattaataactcaaaatggtctttgtctttgtcaaatgtttctcatgttggtccacatgactctattagttgttttgta 16997231  T
Q  273 tttt 276  Q
    ||||    
T  16997232 tttt 16997235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 42026986 - 42027083
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||| |||| |||||||||||||||||| | || ||||||||||||| ||| ||| |||| ||  ||||||||||| |||||||| |||||    
T  42026986 aaattggtccccgactttattaataactcaaaatgtttttcgtctttgtcaaacctttctcaaattgatccgtgactctattaattgttttgtatttt 42027083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 16997286 - 16997230
Alignment:
Q  314 atgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  16997286 atgtcattaaccactaaataatattcaaaagacattgaaccattaaaactcaaaata 16997230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 11732634 - 11732733
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||| |||||| |||||||||||||||| |||||||| ||| |||| |||| ||  |||| | ||||||||| ||||||||||| ||||||||| |||||    
T  11732634 tcaatttggtcactgactctattaataattcaaaatggtctctgtcattgtgaagtgtttcttagattggtctttgactctatttgttgttttgtatttt 11732733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 42950382 - 42950481
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||| ||| ||||| ||| |||||||||||||||||||||| || | |||||||| |||| |||||||||||  | ||||| ||| |||||||| |||||    
T  42950382 tcaatttgatccctaactttattaataactcaaaatgatctatgccgttgtcaaatgtttctcagattggtccctaactctgttaattgttttgtatttt 42950481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 633
Target Start/End: Complemental strand, 6133562 - 6133509
Alignment:
Q  580 atattatcttcatcatcatacaaaattaacacaaatttaaacccaaaagttaaa 633  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||| |||||    
T  6133562 atattatcttcatcatcatccaaaattaactcaaatataaacccaaaacttaaa 6133509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 18385779 - 18385866
Alignment:
Q  190 tgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaag 279  Q
    |||||||||||||||||||||||  | | |||||||||||||| ||| |||||||||||    |||| |||| |||||||| ||||||||    
T  18385779 tgactctattaataactcaaaat--tgtctgtctttgtcaaacatttatcagattggtccccaactccattaattgttttgtattttaag 18385866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 5e-55; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 171 - 370
Target Start/End: Original strand, 4066917 - 4067113
Alignment:
Q  171 tttgtatcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttg 270  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||  ||||||||||||| |||| ||||||||||||| |||||||| |   ||||||    
T  4066917 tttgtatcaaattggtccctgactctattaataattcaaaatggtcactgtctttgtcaaaagtttctcagattggtcatcgactctataa---gttttg 4067013  T
Q  271 cattttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
     |||||||| || ||||||| |||||||||| ||||||| ||||||||||| || || ||||||||||||||||||||||| | ||||||||||||||||    
T  4067014 tattttaagtcattaacgtaccaaataagatccaaaagacattatgtcatttactacgaaataatatccaaaagacattgagccattaacactcaaaata 4067113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 177 - 370
Target Start/End: Original strand, 34535330 - 34535523
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||| |||| ||||||||||||||||| |||||| ||  ||  |||||||||||||| ||| |||||||  ||||| |||||||| |||||||||||    
T  34535330 tcaaattagtccttgactctattaataacttaaaatggtcactgaatttgtcaaacgtttctcaaattggtccctgactgtattagttattttgcatttt 34535429  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    ||  || ||||||| ||||||||||||||||  ||| || ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  34535430 aaatcattaacgtaccaaataagattcaaaaagtatcatatcattaaccactaaataatattcaaaagacattgagccattaacactcaaaata 34535523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 177 - 463
Target Start/End: Original strand, 33321076 - 33321360
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||  ||||||||||||||| | |||||||||| |||||||||||||| ||| | | |||| ||   ||||||||||||||||||| |||||    
T  33321076 tcaaattggtcattgactctattaataatttaaaatgatctctgtctttgtcaaacatttcttatattgatccccgactctattagttgttttgtatttt 33321175  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaa 376  Q
    ||| || ||||||| ||||||| |||||||||  || ||||||||||| | |||||||||||||||||||| |||   |||| ||||||||  |||||||    
T  33321176 aagtcattaacgtaccaaataaaattcaaaaggcatcatgtcattaacgattaaataatatccaaaagacaatgagtcattatcactcaaa--atacaaa 33321273  T
Q  377 agaattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagaccaatt 463  Q
    | || ||||| || ||  || || ||| |||||  ||||||||| || | || |||||||||||||||| | ||||||| |||||||    
T  33321274 acaaataatagagacaatgaccaatttgaaaaaagtttgacaaagacgtggactattttgagttattaatagagtcagaaaccaatt 33321360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 181 - 370
Target Start/End: Complemental strand, 49784847 - 49784654
Alignment:
Q  181 attggtccctgactctattaataactcaaaatgatctttgtctttgt---caaacgtttttcagattggtcattgactctattagttgttttg-catttt 276  Q
    |||||||||||||||||||||||||||||||| | |  ||| ||| |   |||| |||| |||||||||||  |||||||||||||| ||||  ||||||    
T  49784847 attggtccctgactctattaataactcaaaattagccatgttttttttatcaaatgtttctcagattggtctctgactctattagttttttttacatttt 49784748  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    ||| || |||||||   |||||||||||||||| |||||| |||||||||||| ||||||| ||||| ||||||||| || |||||||||||||    
T  49784747 aagtcattaacgtacttaataagattcaaaagacattatgccattaaccactacataatattcaaaacacattgaaccatcaacactcaaaata 49784654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 263 - 463
Target Start/End: Original strand, 27133979 - 27134177
Alignment:
Q  263 ttgttttgcattttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacac 362  Q
    ||||||||||||||||| || ||||||| |||||||||| ||||||| |||||| |||||||||||||||||||||||||| |||||||   ||||||||    
T  27133979 ttgttttgcattttaagtcattaacgtaccaaataagatccaaaagacattatgccattaaccactaaataatatccaaaatacattgagtcattaacac 27134078  T
Q  363 tcaaaatatacaaaagaattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagaccaat 462  Q
    |||||  |||||||| || ||||| || ||| || || | | | ||| |||||||||| ||||  |  ||||||||||||||| | ||||| ||||||||    
T  27134079 tcaaa--atacaaaacaactaatagagtcagagaccaatctgagaaacatttgacaaagacatgaaccattttgagttattaatagagtcaaagaccaat 27134176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 221 - 370
Target Start/End: Complemental strand, 23329581 - 23329431
Alignment:
Q  221 tctttgtcaaacgtttttcagattggtcattgactctattagttg-ttttgcattttaaggcactaacgtatcaaataagattcaaaagatattatgtca 319  Q
    ||||| |||||  ||||| |||||||||   |||||||||||||  ||||| |||||||  || ||| ||| |||||||||| ||||||  |||||||||    
T  23329581 tctttatcaaatattttttagattggtctccgactctattagtttcttttgtattttaaatcattaatgtaccaaataagatccaaaaggcattatgtca 23329482  T
Q  320 ttaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    |||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  23329481 ttaaccactaaataatattctaaagacattgaactattaacactaaaaata 23329431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 242 - 346
Target Start/End: Complemental strand, 38208541 - 38208437
Alignment:
Q  242 attggtcattgactctattagttgttttgcattttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaa 341  Q
    |||||||  ||||||||||||||||| ||||||||||  |||||| ||| |||||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  38208541 attggtccctgactctattagttgttctgcattttaaaccactaaagtaccaaataagatccaaaagacattatgtcattaatcactaaataatatccaa 38208442  T
Q  342 aagac 346  Q
     ||||    
T  38208441 gagac 38208437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 27134178 - 27134081
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||  |||||||||||||||||||||||| |   ||||||||||||| |||| |||||||||||  |||||||||||||||||||| |||||    
T  27134178 aaattggtctttgactctattaataactcaaaatggttcatgtctttgtcaaatgtttctcagattggtctctgactctattagttgttttgtatttt 27134081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 27133862 - 27133962
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    |||||| ||||||||| |||||||||||||||||| ||| |||||||||||||||||| |||  |||| || | ||||||||||||||  ||||||||||    
T  27133862 aaattgatccctgactttattaataactcaaaatggtctatgtctttgtcaaacgtttctcatgttggacactaactctattagttgtactgcattttaa 27133961  T
Q  279 g 279  Q
    |    
T  27133962 g 27133962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 33321361 - 33321264
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||  ||||||||||||||||||||||||  ||   ||||||||||||| ||||||| ||||||||||| |||||||| |||||||| |||||    
T  33321361 aaattggtttctgactctattaataactcaaaatagtccacgtctttgtcaaacttttttcaaattggtcattgtctctattatttgttttgtatttt 33321264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 185 - 276
Target Start/End: Original strand, 49784570 - 49784659
Alignment:
Q  185 gtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||||||||||||||||||||| | |  |||||||||||  |||| |||||||||||  |||||| ||||||||||||| |||||    
T  49784570 gtccctgactctattaataactcaaaatggtat--gtctttgtcaagtgtttctcagattggtccctgactcaattagttgttttgtatttt 49784659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 23329337 - 23329436
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||| ||||| |||||||||||||||| ||| ||||| ||| ||| |||||||||||||  |||||||||||  | ||| |||||||||||||| |||||    
T  23329337 tcaatttggttcctgactctattaatacctcgaaatggtctctgtgtttgtcaaacgttactcagattggtctctaactttattagttgttttgtatttt 23329436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 34535622 - 34535535
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagtt 264  Q
    |||| ||||||||||||| ||||||||||||||||||||  || ||||| ||| | |||| |||||||||||  ||||||||||||||    
T  34535622 tcaatttggtccctgactttattaataactcaaaatgattcttatctttatcatatgtttctcagattggtcgctgactctattagtt 34535535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 182 - 276
Target Start/End: Original strand, 38208302 - 38208396
Alignment:
Q  182 ttggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||| ||||||||||| ||||||||||||| | | | |||||||||||  ||| ||||||||||||||||| |||||| || ||||| |||||    
T  38208302 ttggtctctgactctattgataactcaaaatggtttatatctttgtcaaatatttctcagattggtcattgacactattaattattttgtatttt 38208396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 4067204 - 4067115
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgtttt 269  Q
    |||||||||  |||||||||||||||||||||||| ||   |||||||||||| |||| |||||||||||  ||||||| ||| |||||||    
T  4067204 aaattggtcattgactctattaataactcaaaatggtc-acgtctttgtcaaatgtttctcagattggtccatgactctgttaattgtttt 4067115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 2464237 - 2464189
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtcttt 225  Q
    |||||||||||| |||||||||||||||||||||||  || ||||||||    
T  2464237 tcaaattggtccatgactctattaataactcaaaatagtcattgtcttt 2464189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 2464100 - 2464159
Alignment:
Q  182 ttggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcag 241  Q
    |||||||| ||||| ||||||||||||||||||    |||||||||||||||||| ||||    
T  2464100 ttggtcccagactccattaataactcaaaatgactcatgtctttgtcaaacgtttctcag 2464159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 7481235 - 7481190
Alignment:
Q  191 gactctattaataactcaaaatgatctttgtctttgtcaaacgttt 236  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||    
T  7481235 gactctattaataacttaaaatggtctctatctttgtcaaacgttt 7481190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 3e-53; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 177 - 445
Target Start/End: Original strand, 36937545 - 36937809
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||| |||||||||||||||||||||  || |||||||||||||||||| ||| | ||||||||  |||||||||||||||||||||||||||    
T  36937545 tcaaattggtctctgactctattaataactcaa--tggtctttgtctttgtcaaacatttcttagattggtacttgactctattagttgttttgcatttt 36937642  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaa 376  Q
    ||| ||  |||||| |||||||||| ||||||  |||||||||||||||||||||||||||| |||||| | |||   |||||||||||||  |||||||    
T  36937643 aagccatcaacgtaccaaataagatccaaaaggcattatgtcattaaccactaaataatatctaaaagatactgagtcattaacactcaaa--atacaaa 36937740  T
Q  377 agaattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaa 445  Q
    | || ||||| || ||||||||| ||| | ||| |||| ||||| |||  ||  ||||| |||||||||    
T  36937741 acaactaatagagtcagggatcaatttgagaaacatttcacaaagacagagaccattttcagttattaa 36937809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 238 - 395
Target Start/End: Complemental strand, 29469784 - 29469629
Alignment:
Q  238 tcagattggtcattgactctattagttgttttgcattttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatat 337  Q
    |||||||||||  |||||||||||||||||||| |||||||| || ||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  29469784 tcagattggtccctgactctattagttgttttgtattttaagtcattaacgtatcaaataagatcgaaaagacattatgtcattaaccactaaataatat 29469685  T
Q  338 ccaaaagacattgaactattaacactcaaaatatacaaaagaattaataaagccaggg 395  Q
    ||||||||||||||   |||||||||||||  |||||||| |||||||| || |||||    
T  29469684 ccaaaagacattgagtcattaacactcaaa--atacaaaacaattaatagagtcaggg 29469629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 181 - 370
Target Start/End: Complemental strand, 26407725 - 26407536
Alignment:
Q  181 attggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaagg 280  Q
    |||||||||||||||||||||||| |||||||| ||  |||||||||||| | |||||||  ||| || ||||||||||||||||||||| ||||||||     
T  26407725 attggtccctgactctattaataattcaaaatggtccctgtctttgtcaatcatttttcatgttgatccttgactctattagttgttttgtattttaagt 26407626  T
Q  281 cactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
     | ||||||| |||||||||| | ||||  ||||   |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  26407625 tattaacgtaccaaataagatccgaaaggcattagaccattaaccactaaataatattcaaaagatattgaaccattaacactcaaaata 26407536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 177 - 370
Target Start/End: Complemental strand, 29167032 - 29166839
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||| || || ||||||||| ||||||||||||| ||| ||| |||||||||||||| |||||||| ||  | ||| ||||||  ||||| ||||||    
T  29167032 tcaaattagtaccggactctattgataactcaaaatggtctctgtttttgtcaaacgtttctcagattgatccctaactatattagccgttttacatttt 29166933  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    ||| || |||||||  ||||||||| ||||||  |||||  |||||||||||||||||||| ||||||||||| |   |||||||||| |||||    
T  29166932 aagtcattaacgtactaaataagatccaaaaggcattataccattaaccactaaataatattcaaaagacattaagtcattaacactcgaaata 29166839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 26407442 - 26407541
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||  | ||||||||||||||||||||||| ||  |||||||||||||| ||| |||||||||||  || |||||||||||| |||| |||||    
T  26407442 tcaaattggtttcagactctattaataactcaaaatggtccctgtctttgtcaaacttttctcagattggtccatgtctctattagttgatttgtatttt 26407541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 36937830 - 36937731
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||| ||||||| ||||||||||||||||| |||||| ||| ||||||||| ||| |||| ||| |||| ||  |||||||||||||||||||| |||||    
T  36937830 tcaatttggtccttgactctattaataactgaaaatggtctctgtctttgtgaaatgtttctcaaattgatccctgactctattagttgttttgtatttt 36937731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 29469556 - 29469657
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggt--cattgactctattagttgttttgcatt 274  Q
    |||||||||||  |||||||||||||||||||||||| ||  ||||||||||||| |||| ||||||| ||  |  ||||||||||| |||||||| |||    
T  29469556 tcaaattggtcattgactctattaataactcaaaatggtcgctgtctttgtcaaatgtttctcagattagtccccctgactctattaattgttttgtatt 29469655  T
Q  275 tt 276  Q
    ||    
T  29469656 tt 29469657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 18144034 - 18143965
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtc 248  Q
    ||||||||| ||||||||||||||||||||||||| |   ||| |||||||||||||| |||||||||||    
T  18144034 aaattggtctctgactctattaataactcaaaatggttcatgtttttgtcaaacgtttatcagattggtc 18143965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 25961135 - 25961215
Alignment:
Q  190 tgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttg 270  Q
    ||||||||||||||||| |||||| ||  ||| ||| |||||||||| ||| ||| ||| |||||||||||| ||||||||    
T  25961135 tgactctattaataacttaaaatggtccctgtttttatcaaacgtttctcatattagtctttgactctattaattgttttg 25961215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 25961275 - 25961223
Alignment:
Q  311 attatgtcattaaccactaaataatatccaaaagacattgaactattaacact 363  Q
    |||||||||||||||||||||||||||| |||| ||||||| | |||||||||    
T  25961275 attatgtcattaaccactaaataatatctaaaaaacattgagccattaacact 25961223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 29166748 - 29166843
Alignment:
Q  182 ttggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtt--tttcagattggtcattgactctattagttgttttgcattt 275  Q
    |||||||| ||||||||||||||||||||| | || |||||||||| ||| |||  | ||||||||| |  ||| |||||||||||||||| ||||    
T  29166748 ttggtccccgactctattaataactcaaaacggtccttgtctttgtgaaatgtttctctcagattgggccctgagtctattagttgttttgtattt 29166843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 580 - 633
Target Start/End: Original strand, 26379647 - 26379700
Alignment:
Q  580 atattatcttcatcatcatacaaaattaacacaaatttaaacccaaaagttaaa 633  Q
    ||||||||||||||||||| |||||||||| ||| | ||||||||||| |||||    
T  26379647 atattatcttcatcatcatccaaaattaactcaagtataaacccaaaacttaaa 26379700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 30786479 - 30786444
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaat 212  Q
    |||||||| |||||||||||||||||||||||||||    
T  30786479 tcaaattgatccctgactctattaataactcaaaat 30786444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 252 - 338
Target Start/End: Original strand, 30786351 - 30786432
Alignment:
Q  252 gactctattagttgttttgcattttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatc 338  Q
    |||||||| |||||||||| |||||||| || |||| || |||| ||| ||||||     |||||||||||||| ||||||||||||    
T  30786351 gactctatgagttgttttgtattttaagtcattaacataccaaaaaagtttcaaa-----ttatgtcattaacctctaaataatatc 30786432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 3e-44; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 183 - 370
Target Start/End: Original strand, 10388265 - 10388452
Alignment:
Q  183 tggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggca 282  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||| ||| |||| ||| |||||||  |||||||||||| ||||||| |||||||| ||    
T  10388265 tggtctctgactctattaataactcaaaatggtctctgtctttgttaaatgtttctcatattggtctctgactctattaggtgttttgtattttaagtca 10388364  T
Q  283 ctaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
     ||| |||  ||||||||| ||||||| |||||| |||||||||| |||||||||||||||||||||||   ||||| ||||||||||    
T  10388365 ttaaggtactaaataagatccaaaagacattatgccattaaccacaaaataatatccaaaagacattgagtcattaatactcaaaata 10388452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 177 - 463
Target Start/End: Original strand, 67380 - 67664
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||||||||| ||||||||||| |||||| ||  ||| ||| |||||| ||| |||||||||||  | ||||| ||| |||||||| |||||    
T  67380 tcaaattggtccctgactatattaataacttaaaatggtccctgtttttatcaaacatttctcagattggtccctcactctgttaattgttttgtatttt 67479  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaa 376  Q
    ||  || ||| ||| |||||||||||||||||  |||| | ||| ||||||||||||||||||||||| |||||| | ||||||||| ||||||  ||||    
T  67480 aactcattaatgtaccaaataagattcaaaaggcattaggccatcaaccactaaataatatccaaaaggcattgatcaattaacactgaaaata--caaa 67577  T
Q  377 agaattaataaagccagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaacaaagtcagagaccaatt 463  Q
    | || ||||| || |||||| || | | |||||  | ||||||| ||   || |||||||||||||||| ||| |||||||||||||    
T  67578 acaactaatagagtcagggaccaatctgaaaaacgtatgacaaagacggagactattttgagttattaataaaatcagagaccaatt 67664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 180 - 370
Target Start/End: Original strand, 30847668 - 30847858
Alignment:
Q  180 aattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaag 279  Q
    ||||||||  ||| ||||||||||| | |||||| ||  | |||||||||||||||| |||||||||||  | |||||||||||||||||| ||||||||    
T  30847668 aattggtctatgattctattaataatttaaaatggtccctatctttgtcaaacgtttctcagattggtctctaactctattagttgttttgtattttaag 30847767  T
Q  280 gcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
     || ||||||| ||||||| || ||||| |||||||||||||||||||||||||  |||||||| ||||||||  ||||||||| ||||||    
T  30847768 tcattaacgtaccaaataaaatacaaaaaatattatgtcattaaccactaaatagaatccaaaaaacattgaatcattaacacttaaaata 30847858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 67667 - 67568
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||| |||| | |||||||||||||||||  |||  |||||||||| ||||||||||||||||||  |||||||||||||||||||| |||||    
T  67667 tcaaattggtctctgattttattaataactcaaaatagtctccgtctttgtcatacgtttttcagattggtccctgactctattagttgttttgtatttt 67568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 177 - 308
Target Start/End: Complemental strand, 30122871 - 30122751
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||||| ||| |||||||||||||||||| ||| ||||||||||||| ||||| |           ||||||||||||||||||||||||||    
T  30122871 tcaaattggtccctaactttattaataactcaaaatggtctctgtctttgtcaaatgttttcc-----------tgactctattagttgttttgcatttt 30122783  T
Q  277 aaggcactaacgtatcaaataagattcaaaag 308  Q
    ||  || ||||||| |||||||||||||||||    
T  30122782 aaatcattaacgtaccaaataagattcaaaag 30122751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 177 - 308
Target Start/End: Original strand, 3687665 - 3687799
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaa---tgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcat 273  Q
    |||||||| ||| ||||||| ||||||||||||||   || | |||||||||||||||||||| |||||||||||    |||||||||||||||||| |     
T  3687665 tcaaattgatccatgactctgttaataactcaaaaaaatgttatttgtctttgtcaaacgtttctcagattggtccccaactctattagttgttttgtaa 3687764  T
Q  274 tttaaggcactaacgtatcaaataagattcaaaag 308  Q
    |||||| || | ||||| ||||||| |||||||||    
T  3687765 tttaagtcattgacgtaccaaataaaattcaaaag 3687799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 190 - 370
Target Start/End: Complemental strand, 16435114 - 16434938
Alignment:
Q  190 tgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgt 289  Q
    |||||||||||||   |||||||  ||||||| ||||||||| |||||| |||||| |    |||| |||| ||| ||||  |||||||| || ||||||    
T  16435114 tgactctattaat---tcaaaatagtctttgtttttgtcaaatgttttttagattgatttccgactttatttgtt-ttttatattttaagtcattaacgt 16435019  T
Q  290 atcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaata 370  Q
    | ||||||||||  ||||   |||||   ||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  16435018 accaaataagatctaaaatgcattatactattaaccactaaataatatccaaaatacattgagctattaacactcaaaata 16434938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 16434845 - 16434943
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||  ||||||||||||||||| |||||| | | |||||||||||||  ||| ||||||||||| |||||| |||||||||||||| |||||    
T  16434845 tcaaattggtca-tgactctattaataactaaaaatggtatctgtctttgtcaaaaatttctcagattggtccttgactttattagttgttttgtatttt 16434943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 3687918 - 3687821
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||||||| | ||||| |||||||||||| ||| ||| |||||||||||||| ||||||||| |   |||| | |||||||||||| |||||    
T  3687918 aaattggtccctgagtttattagtaactcaaaatggtctctgtttttgtcaaacgtttctcagattggcccccgactttgttagttgttttgtatttt 3687821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 30122535 - 30122481
Alignment:
Q  297 aagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattga 351  Q
    ||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  30122535 aagatccaaaaggcattatgtcattaaccactaaataatatacaaaagacattga 30122481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 6714585 - 6714532
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaa 230  Q
    ||||||||||| |||||| ||||||||| |||||||| ||||||||||||||||    
T  6714585 tcaaattggtctctgactttattaataattcaaaatggtctttgtctttgtcaa 6714532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 35072470 - 35072422
Alignment:
Q  188 cctgactctattaataactcaaaatgatctttgtctttgtcaaacgttt 236  Q
    |||||||||||||||| ||||||||||||| | ||||||||||| ||||    
T  35072470 cctgactctattaatagctcaaaatgatctctatctttgtcaaatgttt 35072422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 3e-41; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 179 - 386
Target Start/End: Complemental strand, 20730653 - 20730451
Alignment:
Q  179 aaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcattttaa 278  Q
    |||||||||| ||||||||||||||||| ||||||      ||||||||||||||||||| |||||||||    |||||||||||||||||| |||||||    
T  20730653 aaattggtccatgactctattaataacttaaaatg------gtctttgtcaaacgttttttagattggtctcatactctattagttgttttgtattttaa 20730560  T
Q  279 ggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaa---aagacattgaactattaacactcaaaatatacaa 375  Q
    | || |||||||| ||||||||| || ||   |||||||||||||||||||||||||||||||   |||||||||||| ||| |||||||||  ||||||    
T  20730559 gccattaacgtattaaataagatccataatgcattatgtcattaaccactaaataatatccaaaagaagacattgaaccattgacactcaaa--atacaa 20730462  T
Q  376 aagaattaata 386  Q
    || ||||||||    
T  20730461 aacaattaata 20730451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 177 - 367
Target Start/End: Complemental strand, 36151059 - 36150869
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    |||||||||| ||| ||||||| |||||||||||||| ||| |||||||||||||||||| ||| |||| ||   |||||| |||||||||||| |||||    
T  36151059 tcaaattggttcctaactctatgaataactcaaaatggtctctgtctttgtcaaacgtttctcaaattgatccccgactctcttagttgttttgtatttt 36150960  T
Q  277 aaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaa 367  Q
    ||| || ||| ||| |||||||||| |||||   |||||| ||||||||||||||||||||||||||||||||||   | |||||||||||    
T  36150959 aagtcattaatgtaccaaataagatccaaaaagcattatgccattaaccactaaataatatccaaaagacattgagtcaataacactcaaa 36150869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 193 - 445
Target Start/End: Original strand, 13932619 - 13932866
Alignment:
Q  193 ctctattaataactcaaaatgatctttgtctttgtcaaacgtttttc--agattggtcattgactctattagttgttttgcattttaaggcactaacgta 290  Q
    ||||||||||||||||||||| |||||    ||||||||| |||||   ||||||||||| |||| |||||||||||||| |||||||| || || ||||    
T  13932619 ctctattaataactcaaaatggtcttt----ttgtcaaacattttttttagattggtcat-gactatattagttgttttgtattttaagtcattatcgta 13932713  T
Q  291 tcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattgaactattaacactcaaaatatacaaaagaattaataaagc 390  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||  |||||| ||||| | ||||||||||||||||  ||||| || ||||| ||     
T  13932714 ccaaataagattcaaaatatattatgtcattaaccactaaatagtattaaaaagatattgagccattaacactcaaaata--caaaataactaatagagt 13932811  T
Q  391 cagggatcagtttaaaaaatatttgacaaatacattgattattttgagttattaa 445  Q
    |  |||||| | | | |||  ||||||||| |||||||  |||||||||||||||    
T  13932812 cgtggatcaatctgagaaacgtttgacaaagacattgaccattttgagttattaa 13932866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 208 - 360
Target Start/End: Original strand, 8999597 - 8999750
Alignment:
Q  208 aaaatgatctttgtctttgtcaaa-cgtttttcagattggtcattgactctattagttgttttgcattttaaggcactaacgtatcaaataagattcaaa 306  Q
    |||||| ||| ||| ||||||||| ||||||| |||||||||   | ||||||||||||||||| |||| ||  || || |||| ||||||| || ||||    
T  8999597 aaaatggtctatgtttttgtcaaatcgttttttagattggtctccggctctattagttgttttgtatttcaaatcattaccgtaccaaataaaatccaaa 8999696  T
Q  307 agatattatgtcattaaccactaaataatatccaaaagacattgaactattaac 360  Q
    || ||||||  ||||||||| |||||||||||||||||||||||||| ||||||    
T  8999697 aggtattataacattaaccattaaataatatccaaaagacattgaaccattaac 8999750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 13932873 - 13932788
Alignment:
Q  191 gactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||| |||||||| ||   ||||||||||||| ||||| |||||    
T  13932873 gactctattaataactcaaaatggtcaatgtctttgtcaaacgtttctcagattgatccacgactctattagttattttgtatttt 13932788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 17990784 - 17990843
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgttt 236  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  17990784 tcaatttggtccctgactctattaataactcaaaatggtctttgtttttgtcaaaagttt 17990843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 36150773 - 36150860
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtc-tttgtcaaacgtttttcagattggtcattgactctattagt 263  Q
    |||||||||||||| ||||||| |||||||||||||| |   |||| ||||||||| |||| ||||||| |||| || ||||||||||    
T  36150773 tcaaattggtccctaactctatgaataactcaaaatggttcatgtcttttgtcaaatgtttctcagatttgtcactggctctattagt 36150860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 22843783 - 22843837
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaa 231  Q
    |||| ||||||||| | ||||||||||| |||||||| ||| |||||||||||||    
T  22843783 tcaatttggtccctcattctattaataattcaaaatggtctctgtctttgtcaaa 22843837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 22843943 - 22843894
Alignment:
Q  191 gactctattaataactcaaaatgatctttgtctttgtcaaacgtttttca 240  Q
    |||||||||||||||| |||||| ||  ||||||||||||| ||||||||    
T  22843943 gactctattaataacttaaaatggtccatgtctttgtcaaatgtttttca 22843894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 70890 - 70791
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattggtcattgactctattagttgttttgcatttt 276  Q
    ||||||||||| ||||||||||||||| ||||||||| ||  |||||||||||||||||| |||||||||||  |||||||||||||||||||| |||||    
T  70890 tcaaattggtctctgactctattaatagctcaaaatggtccatgtctttgtcaaacgtttctcagattggtctctgactctattagttgttttgtatttt 70791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 70629 - 70698
Alignment:
Q  177 tcaaattggtccctgactctattaataactcaaaatgatctttgtctttgtcaaacgtttttcagattgg 246  Q
    |||||||||||||| ||| ||||||||||| |||||||| | |||||||||||||||||| |||||||||    
T  70629 tcaaattggtccctcactttattaataacttaaaatgatttctgtctttgtcaaacgtttctcagattgg 70698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 251 - 351
Target Start/End: Original strand, 8564 - 8664
Alignment:
Q  251 tgactctattagttgttttgcattttaaggcactaacgtatcaaataagattcaaaagatattatgtcattaaccactaaataatatccaaaagacattg 350  Q
    |||||||||||||||||||  |||||||  || ||| | | ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8564 tgactctattagttgttttatattttaaatcattaaggcaccaaataatatccaaaagatattatgtcattaaccactaaataatatccaaaagacattg 8663  T
Q  351 a 351  Q
    |    
T  8664 a 8664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0912 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0912
Description:

Target: scaffold0912; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 633
Target Start/End: Original strand, 1854 - 1908
Alignment:
Q  576 caaaatattatcttcatcatcatacaaaattaacacaaatttaaacccaaaagttaaa 633  Q
    ||||||||| |||||||||||   |||||||||||||||||||||| ||||| |||||    
T  1854 caaaatattttcttcatcatc---caaaattaacacaaatttaaactcaaaacttaaa 1908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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