View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3056-Insertion-28 (Length: 359)
Name: NF3056-Insertion-28
Description: NF3056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3056-Insertion-28 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 7 - 350
Target Start/End: Original strand, 24353084 - 24353429
Alignment:
| Q |
7 |
agtcatacgaaatattaatagtttatatgtcttatttttcttgcttccacttattctattgttttggtcannnnnnnn--attatggatgaacagagcag |
104 |
Q |
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| T |
24353084 |
agtcatacgaaatattaatagtttatatgtcttatttttcttgcttccacttattctattgttttggtcattttttttttattatggatgaacagagcag |
24353183 |
T |
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| Q |
105 |
cttctcgttctccgaaaaacaagtggcttcttccttaaactattattctttaacttgactggaaagtattgttgaacttactcaacatt-taaggagaaa |
203 |
Q |
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| T |
24353184 |
cttctcgttctccgaaaagcaagtggcttcttccttaaactattct-ctttaacttgactggaaagtattgttgaacttactcaacattataaggagaaa |
24353282 |
T |
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| Q |
204 |
actaaagaatattaactcaacattataccgagaaaagtaaagaatattaatttagttgataagaagttcgactcatatattctttgaagatacgagttca |
303 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||| |
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| T |
24353283 |
actaaagaatattaactcaacattatacggagaaaagtaaagaatattaatttagttgataaggagttagactcatatattctttgaagatatgagttca |
24353382 |
T |
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| Q |
304 |
attttcactgatatggaaaactctctggtgactactttgtaaagtat |
350 |
Q |
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| T |
24353383 |
atttttactgatgtgaaaaactctctagtgactgctttataaagtat |
24353429 |
T |
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