View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3056_high_5 (Length: 265)

Name: NF3056_high_5
Description: NF3056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3056_high_5
NF3056_high_5
[»] chr6 (38 HSPs)
chr6 (1-244)||(33041552-33041785)
chr6 (92-207)||(10818343-10818458)
chr6 (92-206)||(9721140-9721254)
chr6 (92-250)||(33236027-33236192)
chr6 (87-207)||(1390446-1390566)
chr6 (93-250)||(5585304-5585470)
chr6 (92-250)||(30487308-30487473)
chr6 (87-250)||(34176411-34176581)
chr6 (93-206)||(9719034-9719147)
chr6 (135-245)||(21606889-21607007)
chr6 (92-206)||(1300748-1300862)
chr6 (95-250)||(19278039-19278206)
chr6 (137-242)||(4097559-4097672)
chr6 (92-245)||(14515552-14515713)
chr6 (139-250)||(31849186-31849305)
chr6 (142-206)||(10348850-10348914)
chr6 (135-206)||(2900038-2900109)
chr6 (92-207)||(665843-665958)
chr6 (92-204)||(16737998-16738110)
chr6 (92-161)||(10818231-10818300)
chr6 (93-162)||(26318477-26318546)
chr6 (163-250)||(13583795-13583890)
chr6 (214-250)||(2893706-2893742)
chr6 (214-250)||(6034204-6034240)
chr6 (135-194)||(9298625-9298685)
chr6 (93-161)||(19278211-19278278)
chr6 (136-207)||(1395763-1395834)
chr6 (136-206)||(30849960-30850028)
chr6 (139-189)||(7775996-7776046)
chr6 (136-250)||(2892650-2892771)
chr6 (92-161)||(14515475-14515544)
chr6 (214-250)||(12811112-12811148)
chr6 (98-163)||(23091129-23091195)
chr6 (135-184)||(31799070-31799120)
chr6 (137-206)||(2892890-2892959)
chr6 (93-158)||(21607020-21607085)
chr6 (93-161)||(4097686-4097754)
chr6 (92-132)||(23090997-23091037)
[»] chr3 (46 HSPs)
chr3 (87-250)||(41110318-41110489)
chr3 (92-249)||(24560294-24560459)
chr3 (87-250)||(18654597-18654768)
chr3 (92-246)||(36568906-36569067)
chr3 (110-206)||(52474043-52474139)
chr3 (87-206)||(41039947-41040066)
chr3 (111-250)||(25654991-25655140)
chr3 (135-249)||(220442-220564)
chr3 (92-250)||(16275707-16275873)
chr3 (135-250)||(21773858-21773981)
chr3 (93-195)||(28581189-28581291)
chr3 (135-250)||(37102194-37102317)
chr3 (141-206)||(9312522-9312587)
chr3 (96-250)||(27541937-27542099)
chr3 (94-206)||(37807208-37807321)
chr3 (109-202)||(46556277-46556369)
chr3 (135-250)||(30200133-30200259)
chr3 (94-207)||(10748299-10748407)
chr3 (147-250)||(2387817-2387928)
chr3 (92-161)||(34641163-34641232)
chr3 (153-206)||(43005804-43005855)
chr3 (141-206)||(52185144-52185207)
chr3 (93-184)||(17474209-17474301)
chr3 (86-161)||(24253895-24253970)
chr3 (87-179)||(26135952-26136044)
chr3 (214-250)||(31684362-31684398)
chr3 (93-250)||(40463874-40464039)
chr3 (214-250)||(46204962-46204998)
chr3 (95-158)||(14897981-14898044)
chr3 (87-161)||(220570-220644)
chr3 (216-250)||(651807-651841)
chr3 (94-184)||(17474356-17474446)
chr3 (111-161)||(28582682-28582732)
chr3 (217-250)||(10748432-10748465)
chr3 (214-247)||(14898055-14898088)
chr3 (92-161)||(41110494-41110563)
chr3 (141-206)||(55327498-55327563)
chr3 (214-250)||(31894020-31894056)
chr3 (92-179)||(13082856-13082943)
chr3 (94-161)||(55428552-55428619)
chr3 (92-174)||(23028086-23028168)
chr3 (93-158)||(6803377-6803442)
chr3 (96-161)||(21773788-21773853)
chr3 (92-161)||(24560219-24560288)
chr3 (113-161)||(30200264-30200312)
chr3 (214-250)||(54574493-54574529)
[»] chr1 (40 HSPs)
chr1 (94-250)||(8529875-8530039)
chr1 (92-250)||(40094935-40095102)
chr1 (92-250)||(30010408-30010574)
chr1 (87-206)||(41498532-41498652)
chr1 (87-250)||(12234086-12234257)
chr1 (87-250)||(38509891-38510062)
chr1 (92-250)||(2858934-2859100)
chr1 (138-248)||(32951366-32951484)
chr1 (87-206)||(43551993-43552108)
chr1 (135-250)||(49946633-49946756)
chr1 (92-206)||(35349468-35349578)
chr1 (93-206)||(20576136-20576247)
chr1 (93-206)||(7444623-7444736)
chr1 (135-249)||(36285619-36285741)
chr1 (136-250)||(51597744-51597866)
chr1 (142-250)||(50744332-50744449)
chr1 (86-205)||(28770852-28770969)
chr1 (144-250)||(45585739-45585853)
chr1 (135-250)||(6563653-6563775)
chr1 (121-250)||(26940874-26941011)
chr1 (86-161)||(32951491-32951566)
chr1 (135-247)||(10391951-10392072)
chr1 (135-206)||(40964726-40964798)
chr1 (135-242)||(41676363-41676480)
chr1 (97-161)||(2859105-2859169)
chr1 (87-154)||(23536777-23536844)
chr1 (87-161)||(35349635-35349709)
chr1 (92-161)||(30010334-30010403)
chr1 (92-157)||(41498406-41498471)
chr1 (87-179)||(2470727-2470819)
chr1 (92-184)||(2506689-2506781)
chr1 (214-250)||(44211037-44211073)
chr1 (94-157)||(35512974-35513037)
chr1 (111-161)||(10391893-10391943)
chr1 (79-161)||(12233999-12234081)
chr1 (92-141)||(20607410-20607459)
chr1 (88-161)||(25268437-25268510)
chr1 (92-189)||(40709294-40709391)
chr1 (93-161)||(7444481-7444549)
chr1 (93-161)||(38510067-38510135)
[»] chr8 (46 HSPs)
chr8 (96-250)||(31543078-31543240)
chr8 (98-250)||(11575415-11575574)
chr8 (92-200)||(34634277-34634385)
chr8 (92-250)||(11785602-11785768)
chr8 (92-250)||(31738499-31738665)
chr8 (135-245)||(1026894-1027012)
chr8 (136-250)||(1281219-1281341)
chr8 (86-250)||(3726859-3727023)
chr8 (93-250)||(16653025-16653190)
chr8 (129-250)||(30664437-30664566)
chr8 (94-246)||(30479721-30479881)
chr8 (96-206)||(36308971-36309081)
chr8 (93-206)||(29690925-29691038)
chr8 (141-250)||(6315138-6315255)
chr8 (135-250)||(7502999-7503122)
chr8 (135-250)||(29358385-29358507)
chr8 (135-250)||(37923123-37923246)
chr8 (120-250)||(2248528-2248666)
chr8 (141-206)||(9718530-9718595)
chr8 (92-250)||(41103506-41103674)
chr8 (142-250)||(28083818-28083934)
chr8 (93-206)||(11033545-11033659)
chr8 (92-161)||(43732860-43732929)
chr8 (110-197)||(10028259-10028347)
chr8 (134-209)||(7979265-7979340)
chr8 (152-250)||(37032455-37032561)
chr8 (135-206)||(4247563-4247633)
chr8 (83-157)||(9718656-9718730)
chr8 (96-161)||(1281149-1281214)
chr8 (93-161)||(16024327-16024394)
chr8 (214-250)||(42650468-42650504)
chr8 (87-157)||(31543249-31543319)
chr8 (163-197)||(35694828-35694862)
chr8 (136-206)||(13405104-13405178)
chr8 (92-250)||(40990183-40990352)
chr8 (92-160)||(2248454-2248522)
chr8 (92-159)||(8815316-8815383)
chr8 (92-207)||(24243052-24243164)
chr8 (137-183)||(5562012-5562058)
chr8 (94-159)||(7394636-7394701)
chr8 (86-179)||(30365126-30365219)
chr8 (150-183)||(42919879-42919912)
chr8 (86-162)||(7503126-7503202)
chr8 (214-246)||(11033497-11033529)
chr8 (94-158)||(11575582-11575646)
chr8 (174-206)||(33922648-33922680)
[»] chr2 (43 HSPs)
chr2 (92-250)||(36347543-36347709)
chr2 (90-250)||(8426879-8427039)
chr2 (92-250)||(23748171-23748337)
chr2 (129-250)||(15224733-15224862)
chr2 (133-250)||(16565853-16565978)
chr2 (92-207)||(36046206-36046321)
chr2 (114-250)||(36566874-36567019)
chr2 (135-247)||(39732774-39732894)
chr2 (92-206)||(34209592-34209706)
chr2 (92-206)||(9631688-9631802)
chr2 (92-250)||(19566822-19566989)
chr2 (135-250)||(39821745-39821868)
chr2 (135-206)||(27926681-27926752)
chr2 (93-251)||(31795772-31795938)
chr2 (92-250)||(40022446-40022615)
chr2 (135-206)||(42316809-42316880)
chr2 (152-241)||(17379897-17379994)
chr2 (139-189)||(1583222-1583272)
chr2 (147-250)||(28262500-28262611)
chr2 (135-192)||(7681386-7681443)
chr2 (96-206)||(12541894-12541999)
chr2 (92-161)||(36347714-36347783)
chr2 (92-184)||(35736337-35736429)
chr2 (92-183)||(887261-887351)
chr2 (86-184)||(45257456-45257555)
chr2 (90-158)||(9426985-9427053)
chr2 (92-160)||(15224868-15224936)
chr2 (92-168)||(17380007-17380083)
chr2 (129-206)||(29525768-29525847)
chr2 (92-159)||(34187577-34187644)
chr2 (146-250)||(37739949-37740060)
chr2 (84-161)||(39732901-39732978)
chr2 (95-154)||(8427051-8427110)
chr2 (86-161)||(22356177-22356252)
chr2 (92-159)||(31061361-31061428)
chr2 (141-206)||(9427113-9427179)
chr2 (87-161)||(35736172-35736246)
chr2 (92-185)||(16713494-16713587)
chr2 (92-161)||(36046375-36046443)
chr2 (214-246)||(6721754-6721786)
chr2 (218-250)||(35736251-35736283)
chr2 (214-250)||(41778849-41778885)
chr2 (86-158)||(41841678-41841750)
[»] chr5 (47 HSPs)
chr5 (87-245)||(10650510-10650661)
chr5 (92-250)||(13634787-13634953)
chr5 (87-250)||(7544212-7544383)
chr5 (92-250)||(8502837-8503003)
chr5 (95-250)||(36363108-36363271)
chr5 (92-192)||(1657955-1658055)
chr5 (87-247)||(10476107-10476275)
chr5 (92-247)||(26414972-26415136)
chr5 (92-206)||(14245090-14245204)
chr5 (92-250)||(16938555-16938721)
chr5 (93-250)||(9798615-9798780)
chr5 (135-250)||(10072692-10072815)
chr5 (92-250)||(28279478-28279645)
chr5 (92-206)||(37607022-37607136)
chr5 (92-206)||(37779231-37779345)
chr5 (142-250)||(9856956-9857072)
chr5 (135-241)||(36392195-36392309)
chr5 (135-207)||(4373611-4373683)
chr5 (141-205)||(20146917-20146981)
chr5 (92-206)||(37551535-37551647)
chr5 (92-206)||(37654365-37654477)
chr5 (136-206)||(20513491-20513561)
chr5 (135-206)||(43535-43607)
chr5 (136-207)||(16501836-16501907)
chr5 (136-250)||(17024270-17024392)
chr5 (135-206)||(22023495-22023568)
chr5 (135-206)||(32727822-32727893)
chr5 (92-178)||(14245202-14245288)
chr5 (93-167)||(11757070-11757144)
chr5 (92-161)||(13634713-13634782)
chr5 (135-195)||(17780279-17780340)
chr5 (92-161)||(26414895-26414964)
chr5 (141-209)||(4423336-4423404)
chr5 (90-178)||(10650427-10650517)
chr5 (92-159)||(34980812-34980879)
chr5 (135-200)||(11419237-11419302)
chr5 (135-183)||(2556167-2556215)
chr5 (214-250)||(22022926-22022962)
chr5 (135-250)||(2550397-2550520)
chr5 (94-153)||(2550533-2550592)
chr5 (135-206)||(29002251-29002322)
chr5 (92-154)||(10476028-10476090)
chr5 (216-250)||(11756953-11756987)
chr5 (87-157)||(33744190-33744260)
chr5 (92-158)||(40815299-40815365)
chr5 (92-161)||(16938481-16938550)
chr5 (214-250)||(14681545-14681581)
[»] chr7 (46 HSPs)
chr7 (111-250)||(24970187-24970333)
chr7 (135-250)||(33655153-33655276)
chr7 (92-250)||(41496959-41497125)
chr7 (92-206)||(18231714-18231828)
chr7 (92-250)||(40196534-40196700)
chr7 (92-250)||(47390931-47391098)
chr7 (96-206)||(4833537-4833647)
chr7 (93-250)||(42306410-42306571)
chr7 (136-250)||(34235053-34235176)
chr7 (92-250)||(45940658-45940824)
chr7 (95-206)||(10315761-10315872)
chr7 (87-250)||(13770945-13771114)
chr7 (110-250)||(25887268-25887417)
chr7 (93-250)||(43230312-43230476)
chr7 (110-250)||(1051520-1051666)
chr7 (135-206)||(32872826-32872897)
chr7 (92-206)||(13425122-13425236)
chr7 (137-251)||(17852946-17853067)
chr7 (147-245)||(22163167-22163272)
chr7 (147-245)||(22221875-22221980)
chr7 (142-206)||(40572287-40572350)
chr7 (136-250)||(34228364-34228486)
chr7 (87-250)||(41008258-41008425)
chr7 (92-178)||(48881560-48881646)
chr7 (92-161)||(39856038-39856107)
chr7 (92-172)||(36267555-36267635)
chr7 (92-161)||(31571643-31571712)
chr7 (137-205)||(19835838-19835906)
chr7 (87-195)||(31553182-31553287)
chr7 (146-206)||(47229888-47229948)
chr7 (92-158)||(33519224-33519290)
chr7 (163-250)||(37417706-37417801)
chr7 (92-161)||(13771119-13771188)
chr7 (92-161)||(28074105-28074174)
chr7 (92-209)||(30592255-30592372)
chr7 (92-161)||(34228492-34228561)
chr7 (93-250)||(26365844-26366009)
chr7 (218-250)||(39856001-39856033)
chr7 (214-250)||(48152056-48152092)
chr7 (137-184)||(2087786-2087833)
chr7 (135-174)||(30891039-30891078)
chr7 (92-159)||(37925843-37925910)
chr7 (87-157)||(47390852-47390922)
chr7 (141-198)||(42087131-42087188)
chr7 (93-157)||(33655285-33655349)
chr7 (134-162)||(34235180-34235208)
[»] chr4 (41 HSPs)
chr4 (92-250)||(45741966-45742132)
chr4 (92-250)||(54935144-54935311)
chr4 (109-250)||(31348340-31348489)
chr4 (87-250)||(5730827-5730998)
chr4 (92-250)||(27735821-27735987)
chr4 (92-246)||(54320514-54320676)
chr4 (92-246)||(41174425-41174587)
chr4 (92-250)||(49735470-49735636)
chr4 (98-250)||(35248762-35248922)
chr4 (92-206)||(24565348-24565462)
chr4 (92-187)||(6938394-6938489)
chr4 (147-248)||(16400878-16400987)
chr4 (135-206)||(34110933-34111003)
chr4 (104-250)||(6891436-6891590)
chr4 (136-250)||(36151652-36151773)
chr4 (86-175)||(37711282-37711371)
chr4 (153-250)||(26167013-26167118)
chr4 (92-161)||(31348494-31348563)
chr4 (135-250)||(46007744-46007869)
chr4 (98-206)||(17938115-17938223)
chr4 (141-197)||(29798422-29798478)
chr4 (111-250)||(22659274-22659413)
chr4 (135-209)||(36278376-36278450)
chr4 (135-250)||(44784068-44784190)
chr4 (92-161)||(1968532-1968601)
chr4 (135-251)||(47433754-47433877)
chr4 (110-181)||(21694910-21694981)
chr4 (94-161)||(27735749-27735816)
chr4 (93-156)||(46007879-46007942)
chr4 (85-163)||(2247972-2248050)
chr4 (92-161)||(45132668-45132737)
chr4 (137-178)||(45911327-45911368)
chr4 (92-161)||(54576329-54576398)
chr4 (214-250)||(37711219-37711255)
chr4 (92-159)||(54935069-54935137)
chr4 (110-236)||(45132517-45132655)
chr4 (92-158)||(47433885-47433951)
chr4 (87-157)||(47846233-47846303)
chr4 (95-177)||(55510326-55510407)
chr4 (141-206)||(2247854-2247919)
chr4 (92-180)||(37761467-37761555)
[»] scaffold0067 (2 HSPs)
scaffold0067 (86-249)||(39182-39357)
scaffold0067 (92-161)||(39363-39432)
[»] scaffold0262 (1 HSPs)
scaffold0262 (96-250)||(16302-16464)
[»] scaffold0294 (1 HSPs)
scaffold0294 (89-250)||(15339-15507)
[»] scaffold0171 (1 HSPs)
scaffold0171 (111-202)||(16082-16173)
[»] scaffold0198 (1 HSPs)
scaffold0198 (93-178)||(3150-3235)
[»] scaffold0026 (2 HSPs)
scaffold0026 (129-206)||(1300-1377)
scaffold0026 (93-161)||(1175-1243)
[»] scaffold0341 (1 HSPs)
scaffold0341 (135-250)||(18846-18968)
[»] scaffold0096 (2 HSPs)
scaffold0096 (137-250)||(6660-6780)
scaffold0096 (87-158)||(6581-6652)
[»] scaffold0007 (1 HSPs)
scaffold0007 (94-184)||(242366-242456)
[»] scaffold0240 (1 HSPs)
scaffold0240 (92-158)||(17716-17780)
[»] scaffold0012 (1 HSPs)
scaffold0012 (94-157)||(184784-184847)


Alignment Details
Target: chr6 (Bit Score: 177; Significance: 2e-95; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 33041785 - 33041552
Alignment:
Q  1 attgtgaacttacttggtgttatttagttgtggtgagagtaatgtttcattgtctcatttagtttgagttacttaaaaatggttgttttatggtgtgttt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33041785 attgtgaacttacttggtgttatttagttatggtgagagtaatgtttcattgtctcatttagtttgagttacctaaaaatggttgttttatggtgtgttt 33041686  T
Q  101 ggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat 200  Q
    ||||||||||||||||||||||||           |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33041685 ggatggaaagtttaggaggggaag----------atttattttttatttttaaattacggatactatgaaatgttttttaaaaagttaacatattaacat 33041596  T
Q  201 gataaataacacctcaatcacacttaatttattttagaaaaaca 244  Q
    |||||||||||| ||||||||||||||||||||||| |||||||    
T  33041595 gataaataacacttcaatcacacttaatttattttaaaaaaaca 33041552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 207
Target Start/End: Complemental strand, 10818458 - 10818343
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||| || ||||||||||||| ||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||    
T  10818458 ggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaaca 10818359  T
Q  192 tattaacatgataaat 207  Q
    ||||||||||||||||    
T  10818358 tattaacatgataaat 10818343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 9721140 - 9721254
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||| ||| |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  9721140 ggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaaca 9721239  T
Q  192 tattaacatgataaa 206  Q
    ||||||  |||||||    
T  9721240 tattaatttgataaa 9721254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 33236192 - 33236027
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||| |||||||||| |||||| ||| |||| ||| ||||  | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  33236192 ggtgtatttggatggagagtttatgagaggaaaggaggggagagattacttttcatttttaaattacggacactatgaaat-ttttttaaaaagttaaca 33236094  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||        ||||  | |||||||  ||||||||||||||||||||||||||||    
T  33236093 tattaacatgataaacaatcatataattcttcaatcagtcttaatttattttagaaaaacatgttat 33236027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 1390566 - 1390446
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||| |||||||||||||| |  |||||||||||||| ||| | |    ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  1390566 tttaaggtgtgtttggatgaagggtttaggaggggaatggaggaggggttttacttttcatttttaaattactgacactatgaaatattttttaaaaagt 1390467  T
Q  187 taacatattaacatgataaat 207  Q
    |||||||||||||||||||||    
T  1390466 taacatattaacatgataaat 1390446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 250
Target Start/End: Original strand, 5585304 - 5585470
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttactttt-catttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    |||||||||||||||  |||||||||||||||| |||| |  |||||||||| | ||||||||||||| | |||||||||| |||||||||||| |||||    
T  5585304 gtgtgtttggatggagggtttaggaggggaaggaatggaagagtttactttttcttttttaaattacgaacactatgaaatgttttttaaaaaggtaaca 5585403  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||| ||||        | || |  |||||||||||||||||||||||||||||||||||||    
T  5585404 tattaacataataaacgattatacaatatttcaatcacacttaatttattttagaaaaacatgttat 5585470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 30487308 - 30487473
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||| |||||||||| |||||||| ||| | |||||||| | ||||||||||| ||||    
T  30487308 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta-ggacagtatgaaatgtcttttaaaaagtcaaca 30487406  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||        |||| || |||||||||||| |||||||||| |||||||||||||    
T  30487407 tattaacatgataaacaataatataatacttcaatcacacttgatttattttataaaaacatgttat 30487473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 34176581 - 34176411
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggagggga-agggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 185  Q
    |||||||||||||||||||||  ||||| ||||| | || |||| ||  ||||| ||||||||||||||||||||| |||||||||||||||||  ||||    
T  34176581 tttatggtgtgtttggatggagggtttatgagggaagagagatgaga--gtttagttttcatttttaaattacggacactatgaaatattttttttaaag 34176484  T
Q  186 ttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||| ||||        |||| ||  ||||||||||| ||||||||||||||||||||||||    
T  34176483 ttaacatattaacataataaacgatcgtataatactgcaatcacacttgatttattttagaaaaacatgttat 34176411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 9719034 - 9719147
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    |||||||||||| ||  |||||||||||||||||| ||||   |||| ||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaacat 9719133  T
Q  193 attaacatgataaa 206  Q
    |||||  |||||||    
T  9719134 attaatttgataaa 9719147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 21606889 - 21607007
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||        |||| || ||| ||||||||     
T  21606889 gtttacttttcatttttaaattacggaaactatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcagtcacacttt 21606988  T
Q  227 atttattttagaaaaacat 245  Q
    |||||||||||||||||||    
T  21606989 atttattttagaaaaacat 21607007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 1300862 - 1300748
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||| | ||  ||| ||| ||||  ||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  1300862 ggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaatatgaaatattttataaaaagttaaca 1300763  T
Q  192 tattaacatgataaa 206  Q
    ||||||| |||||||    
T  1300762 tattaacctgataaa 1300748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 250
Target Start/End: Original strand, 19278039 - 19278206
Alignment:
Q  95 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaac---- 190  Q
    |||||||||||||  |||||||||||||||| | | ||  |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||        
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaatattttttaaaaagttgacatat 19278138  T
Q  191 atattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||        || | || ||||||| ||| |||||||||||||||||||||||||    
T  19278139 atattaacatgataaacgatcatatgatacttcaatcagactaaatttattttagaaaaacatgttat 19278206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 4097559 - 4097672
Alignment:
Q  137 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaat 228  Q
    |||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  4097559 ttacttttaatttttaaattacggacactttgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaat 4097658  T
Q  229 ttattttagaaaaa 242  Q
    ||||||| ||||||    
T  4097659 ttattttggaaaaa 4097672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 245
Target Start/End: Complemental strand, 14515713 - 14515552
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||||||||||||| | ||||  |||||  |||||||||||||||| | | ||||| ||||||||||| || ||||||||    
T  14515713 ggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaatattttttgaagagttaaca 14515614  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacat 245  Q
    ||| ||||||||||        |||| || ||| ||||||||||||||||||||| ||||||    
T  14515613 tatgaacatgataaatgataatataatacttcattcacacttaatttattttagagaaacat 14515552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 31849305 - 31849186
Alignment:
Q  139 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaattt 230  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||||| ||||||||||||| ||||||        |||| || |||||||||||| ||||    
T  31849305 acttttcatttttaaattacggacactataaaatgtcttttaaaaaattaacatattaacgtgataaacaataatataatacttcaatcacacttgattt 31849206  T
Q  231 attttagaaaaacatgttat 250  Q
    |||||||||||| |||||||    
T  31849205 attttagaaaaatatgttat 31849186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 10348850 - 10348914
Alignment:
Q  142 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | ||||||    
T  10348850 tttcatttttaaattacggataatatgaaatatcttttaaaaagttaacatattaatacgataaa 10348914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 2900109 - 2900038
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    |||||||||||||||||||||||  || |||||||||| |||| ||| ||||||||||||||||||||||||    
T  2900109 gtttacttttcatttttaaattatagacactatgaaatgttttataagaagttaacatattaacatgataaa 2900038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 665843 - 665958
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa-gttaac 190  Q
    |||||||||||||| |  ||||||||||||||| || ||||  ||| | ||||||||||||||||| | ||| |||||||| | |||||||||  |||||    
T  665843 ggtgtgtttggatg-agggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatgtcttttaaaaattttaac 665941  T
Q  191 atattaacatgataaat 207  Q
    |||||||||||||||||    
T  665942 atattaacatgataaat 665958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 16737998 - 16738110
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||| ||| ||||| || |||||  |||||||||| ||||||||||| ||| |||||||||| |||||| | || |||| |    
T  16737998 ggtgtgtttggatggagggtttaagagaggaagagaggggaagatttacttttcgtttttaaattatggaaactatgaaatgttttttgataaattaaaa 16738097  T
Q  192 tattaacatgata 204  Q
    || ||||||||||    
T  16738098 taataacatgata 16738110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 10818231 - 10818300
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  |||||||||||||||||| |||| |||||| ||||| |||||||||||||||    
T  10818231 ggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacgga 10818300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 162
Target Start/End: Complemental strand, 26318546 - 26318477
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggat 162  Q
    ||||||||||||||| |||||||||||| |||||| |||||  |||||||||| ||||||||||| ||||    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaattatggat 26318477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 250
Target Start/End: Complemental strand, 13583890 - 13583795
Alignment:
Q  163 actatgaaatattttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||| ||||||||||| ||||||| ||||||| ||||||        || |  |||||||||||||||||||||||||||||||||||||    
T  13583890 actatgaaatgttttttaaaaaattaacatgttaacataataaatgatcatataatatttcaatcacacttaatttattttagaaaaacatgttat 13583795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 2893742 - 2893706
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  2893742 tcaatcacacttaatttattttagaaaaacatgttat 2893706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 6034204 - 6034240
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  6034204 tcaatcacacttaatttattttagaaaaacatgttat 6034240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 9298685 - 9298625
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatat 194  Q
    |||||||||||| |||||||||||||| | ||||||||  |||||||||||||||||||||    
T  9298685 gtttacttttcaattttaaattacggacattatgaaatgtttttttaaaaagttaacatat 9298625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 19278278 - 19278211
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||||||||||| || ||||||||||||||||||| ||||  ||||| ||||| |||||||||||||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacgga 19278211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 1395834 - 1395763
Alignment:
Q  136 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat 207  Q
    |||||||||||||||||||||||  | ||| |  ||| ||||||||||| ||||||||||| ||||||||||    
T  1395834 tttacttttcatttttaaattactaacactgtagaatgttttttaaaaaattaacatattagcatgataaat 1395763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 30849960 - 30850028
Alignment:
Q  136 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||| |||| ||||||||||||| ||||||| |||||||||||||||  |||| ||| ||||||||||||    
T  30849960 tttacatttcgtttttaaattacgcatactataaaatattttttaaaa--ttaaaataataacatgataaa 30850028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 7775996 - 7776046
Alignment:
Q  139 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 189  Q
    |||||||||||| |||||||| | ||||| |||||||||||||||||||||    
T  7775996 acttttcattttaaaattacgaacactataaaatattttttaaaaagttaa 7776046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 2892650 - 2892771
Alignment:
Q  136 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 227  Q
    |||||||||  || |||||||||| | ||||||| |||||||||||||| |||| ||| |||||||||||        |||| |  ||||||||||| ||    
T  2892650 tttactttttgttgttaaattacgcacactatgagatattttttaaaaa-ttaaaataataacatgataaacaatcatataatatttcaatcacactaaa 2892748  T
Q  228 tttattttagaaaaacatgttat 250  Q
    |||||||||||||||| ||||||    
T  2892749 tttattttagaaaaacgtgttat 2892771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 14515475 - 14515544
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||| |||||||||||||||    
T  14515475 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacgga 14515544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 12811112 - 12811148
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||||||||||||||| ||||    
T  12811112 tcaatcacacttaatttattttagaaaaacatattat 12811148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 23091195 - 23091129
Alignment:
Q  98 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttc-atttttaaattacggata 163  Q
    ||||||||||  |||||||||||||||||| ||||  | |||||||||  |||||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacggata 23091129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 31799120 - 31799070
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 184  Q
    ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  31799120 gtttacttttcttttttaaattacggatattataaaataattttttaaaaa 31799070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 2892890 - 2892959
Alignment:
Q  137 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||  ||||||||||||| | ||||||||||||||| ||| ||  ||| ||| ||||||||||||    
T  2892890 ttactttttgtttttaaattacgcacactatgaaatattttgtaagaaagtaaaataataacatgataaa 2892959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 21607085 - 21607020
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 158  Q
    |||||||||||| ||  ||||||||||||||| ||   |||||||||| |||| ||||||||||||    
T  21607085 gtgtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattac 21607020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 4097754 - 4097686
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||||||||||| ||  ||||| |||||||||||| || |  ||| ||||||| |||||||||||||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacgga 4097686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 23090997 - 23091037
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatggga 132  Q
    ||||||||||||| ||| |||||||||||||||||| ||||    
T  23090997 ggtgtgtttggattgaaggtttaggaggggaagggagggga 23091037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 6e-49; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 41110318 - 41110489
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||||||||||||||||||||   ||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41110318 tttatggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggacactatgaaatattttataaaaagt 41110417  T
Q  187 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||        |||| || |||||||||||||||||||||| ||||||||||||||    
T  41110418 taacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttcgaaaaacatgttat 41110489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 24560459 - 24560294
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||||||||||| ||||||||  |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  24560459 ggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgttttttaaaaagttaaca 24560360  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgtta 249  Q
    ||||||||||||||        |||| || ||||||||| ||||||||||||||||||||||||||    
T  24560359 tattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacatgtta 24560294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 18654597 - 18654768
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||| ||||||||||||||||  ||||||||||| ||| |||||||  |||||  ||||||||||||||||||||  |||| ||||||||||| || |||    
T  18654597 tttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagt 18654696  T
Q  187 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||        |||| || ||||| ||||||||||||||||||| |||||||||||    
T  18654697 taacatattaacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacatgttat 18654768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 246
Target Start/End: Original strand, 36568906 - 36569067
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||  ||||| |||||||||||||||| || | |||||||||| ||||| ||||||||||||    
T  36568906 ggtgtgtttggatggagggtttaggagtggaatggaggggagagttta-ttttcatttttaaatttcgaacactatgaaatgtttttcaaaaagttaaca 36569004  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatg 246  Q
    ||||||||||||||        |||| |  |||||||||||||||||||||||||||||||||    
T  36569005 tattaacatgataaacaatcgtataatagttcaatcacacttaatttattttagaaaaacatg 36569067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 52474139 - 52474043
Alignment:
Q  110 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||||||||||||  |||  |||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  52474139 gtttaggaggggaagggagaggagggtttactttttatttttaaattacggatcctatgaaatattttgtaaaaagttaacatattaatatgataaa 52474043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 41039947 - 41040066
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||| ||||||||||||||||| ||||||||||||||| ||  | |   |||| |||||| ||||||||||| || ||||||||||||||| ||||||||    
T  41039947 tttagggtgtgtttggatggaaggtttaggaggggaagagagcgtaggctttaattttcaattttaaattacagacactatgaaatattttataaaaagt 41040046  T
Q  187 taacatattaacatgataaa 206  Q
    ||||||||||||||||||||    
T  41040047 taacatattaacatgataaa 41040066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 250
Target Start/End: Original strand, 25654991 - 25655140
Alignment:
Q  111 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa----- 205  Q
    ||||||||||||||||| ||||  |||||||||||||||||| |||||| | |||| ||||| |||||| || |||||||||||||| |||||||         
T  25654991 tttaggaggggaagggaggggagggtttacttttcatttttatattacgaacactaagaaatgttttttgaagagttaacatattaatatgataaatgat 25655090  T
Q  206 -----ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
         |||| || |||||||||||||||||||||||||||||||||||||    
T  25655091 catatataatacttcaatcacacttaatttattttagaaaaacatgttat 25655140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 220442 - 220564
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    ||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||| ||||        ||||||| ||||||| ||||     
T  220442 gtttagttttcatttttaaattacggacattatgaaatgttttttaaaaagttaacatattaacataataaacaatcttataacacttcaatcatacttg 220541  T
Q  227 atttattttagaaaaacatgtta 249  Q
    |||||||||||||||||||||||    
T  220542 atttattttagaaaaacatgtta 220564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 16275707 - 16275873
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||  |||| |||||| ||||  ||| ||| |||||||||||||| |||| | |||||||| |||| ||||||||||||     
T  16275707 ggtgtgtttggatggatggtttataagggaaagggaggggagagttcactattcatttttaaatttcggacattatgaaatgttttataaaaagttaact 16275806  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||        |||| || |||||||||||| ||||||||||||||||||||||||    
T  16275807 tattaacatgataaacaaccatataatacttcaatcacacttgatttattttagaaaaacatgttat 16275873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 21773981 - 21773858
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    |||||||||| |||||||||||||| | |||| ||||| |||||||||||||||||||||| |||||||||        ||||  | |||||||||||||    
T  21773981 gtttactttttatttttaaattacgaacactaggaaatgttttttaaaaagttaacatatttacatgataaacaatcatataattcttcaatcacactta 21773882  T
Q  227 atttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||||    
T  21773881 atttattttagaaaaacatgttat 21773858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 28581189 - 28581291
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    |||||||||||||||  |||||| || |||||||| ||||  ||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattacagatattgtgaaatattttttaaaaagttaacat 28581288  T
Q  193 att 195  Q
    |||    
T  28581289 att 28581291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 37102194 - 37102317
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa-------ataacacctcaatcacacttaa 227  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||       |||| || |||| ||||||| |    
T  37102194 gtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacataataacgatcatataatacttcaaccacacttga 37102293  T
Q  228 tttattttag-aaaaacatgttat 250  Q
    |||||||||| |||||||||||||    
T  37102294 tttattttagaaaaaacatgttat 37102317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 9312522 - 9312587
Alignment:
Q  141 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||    
T  9312522 ttttcatttttaaattacagacactatgaaatattttgtaaaaagttaacatattaacatgataaa 9312587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 250
Target Start/End: Original strand, 27541937 - 27542099
Alignment:
Q  96 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 195  Q
    ||||||||| ||  |||||||||||||||||| | ||  ||| || ||||||||||||||||  || ||||||||||| || |||||||  |||||||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaattagagacactatgaaatacttgttaaaaatctaacatatt 27542036  T
Q  196 aacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||        |||| || ||||||||| ||||||||||||||||||| |||||||    
T  27542037 aacatgataaacgatcatataatacttcaatcacagttaatttattttagaaaaatatgttat 27542099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 206
Target Start/End: Complemental strand, 37807321 - 37807208
Alignment:
Q  94 tgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    |||||||| |||||  |||||||||||| ||| || |  |||||||||||||| ||||||||||  ||| |||||||||| |||||||||||||||| ||    
T  37807321 tgtgtttgaatggagggtttaggagggggaagagaggacaatgtttacttttcgtttttaaattttggacactatgaaatgttttttaaaaagttaatat 37807222  T
Q  193 attaacatgataaa 206  Q
    ||||||||||||||    
T  37807221 attaacatgataaa 37807208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 46556369 - 46556277
Alignment:
Q  109 agtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatga 202  Q
    |||||||||| |||| ||| ||||  ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  46556369 agtttaggagaggaatggaggggag-gtttacttttcatttttcaattacggacactatgacatattttttaaaaagttaagatattaacatga 46556277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 30200133 - 30200259
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataac-----------acctcaatcacac 223  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||| ||||| |||           || | ||||||||    
T  30200133 gtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagtttacatattaacataataaacaacgatcatatagtactttaatcacac 30200232  T
Q  224 ttaatttattttagaaaaacatgttat 250  Q
    || ||||||||||||||||||||||||    
T  30200233 ttgatttattttagaaaaacatgttat 30200259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 10748299 - 10748407
Alignment:
Q  94 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 193  Q
    ||||||||||||||  ||||||||||||||||||   ||  ||||||     |||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  10748299 tgtgtttggatggagggtttaggaggggaagggagaagagagtttac-----atttttaaattacgggcattataaaatgttttttaaaaagttaacata 10748393  T
Q  194 ttaacatgataaat 207  Q
    ||||||||||||||    
T  10748394 ttaacatgataaat 10748407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 2387817 - 2387928
Alignment:
Q  147 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 238  Q
    ||||||||||||||| |||||| ||| |||||||| ||||||| ||| |||||||||||        |||| |  | |||||||||||||||||||||||    
T  2387817 tttttaaattacggacactatggaatgttttttaataagttaaaataataacatgataaacgatcatataataatttaatcacacttaatttattttaga 2387916  T
Q  239 aaaacatgttat 250  Q
    ||||||||||||    
T  2387917 aaaacatgttat 2387928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 34641232 - 34641163
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| |||||||||||||||    
T  34641232 ggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacgga 34641163  T

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Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 43005804 - 43005855
Alignment:
Q  153 aattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  43005804 aattacggat--tatgaaatattttttaaaaagttaacatattaatatgataaa 43005855  T

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Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 52185207 - 52185144
Alignment:
Q  141 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    |||| |||||||||||| ||| ||||  ||||||||| ||||||||||||||||||||||||||||    
T  52185207 tttttatttttaaattatggacacta--aaatattttataaaaagttaacatattaacatgataaa 52185144  T

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Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 17474209 - 17474301
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 184  Q
    |||||||||||| ||  ||||||||||| |||  |||| || ||||||||||| ||||||||||||||| | ||| |||| ||||||||||||    
T  17474209 gtgtgtttggattgagggtttaggagggaaagtaatggaaaagtttacttttcttttttaaattacggacattataaaataattttttaaaaa 17474301  T

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Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 24253970 - 24253895
Alignment:
Q  86 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatg-tttacttttcatttttaaattacgga 161  Q
    ||||| ||||||||||||||||  |||||| ||||||||||| ||||| | |||||||||| |||||||||||||||    
T  24253970 ttttagggtgtgtttggatggagggtttagaaggggaaggga-gggaaggatttacttttcttttttaaattacgga 24253895  T

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Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 26136044 - 26135952
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 179  Q
    |||| |||||| ||| |||||  ||||||||||||||||||  |||  ||||||||||| ||||||||||||||| | ||| ||||| |||||    
T  26136044 tttaaggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaataattttt 26135952  T

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Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 31684398 - 31684362
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  31684398 tcaatcacacttaatttattttagaaaaacatgttat 31684362  T

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Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 250
Target Start/End: Original strand, 40463874 - 40464039
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    ||||||||||||| |  ||||| ||||  ||  |||| || ||| |||||||||||||||||||||||| ||||| || | ||||||||||  |||| |     
T  40463874 gtgtgtttggatgaagggtttatgaggataaacgatgagagtgtgtacttttcatttttaaattacggacactataaattgttttttaaaatattaaaac 40463973  T
Q  193 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    | |||||||||||        |||| |  |||||| |||||||||||||||||||||| |||||||    
T  40463974 aataacatgataaacaatcatataaaaattcaatctcacttaatttattttagaaaaatatgttat 40464039  T

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Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 46204998 - 46204962
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  46204998 tcaatcacacttaatttattttagaaaaacatgttat 46204962  T

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Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 14897981 - 14898044
Alignment:
Q  95 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 158  Q
    |||||||||| || |||||||||||||||||||  ||||  |||||||||| ||||||||||||    
T  14897981 gtgtttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattac 14898044  T

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Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 220644 - 220570
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||| ||| ||||||||||||  |||||||||| ||||||| ||||   |||||||||| |||||||||||||||    
T  220644 tttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacgga 220570  T

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Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 651841 - 651807
Alignment:
Q  216 aatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||||||||||||||||||    
T  651841 aatcacacttaatttattttagaaaaacatgttat 651807  T

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Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 184
Target Start/End: Complemental strand, 17474446 - 17474356
Alignment:
Q  94 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 184  Q
    ||||||||||| ||  ||| |||||||||||||| ||||  ||| ||||||  ||||||||||||| ||| | | ||||||||||||||||    
T  17474446 tgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaa 17474356  T

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Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 28582732 - 28582682
Alignment:
Q  111 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  28582732 tttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 28582682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 10748432 - 10748465
Alignment:
Q  217 atcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||||||||||||||    
T  10748432 atcacacttaatttattttagaaaaacatgttat 10748465  T

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Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 14898088 - 14898055
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgt 247  Q
    ||||||||||||||||||||||||||||||||||    
T  14898088 tcaatcacacttaatttattttagaaaaacatgt 14898055  T

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Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 41110563 - 41110494
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  ||||  ||||||||||||  |||| ||||||||||| |||||||||||||||    
T  41110563 ggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacgga 41110494  T

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Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 55327563 - 55327498
Alignment:
Q  141 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||| ||||||||| ||||| | |||||||| ||||||||||||||| | ||||||||| |||||    
T  55327563 ttttcgtttttaaatcacggacattatgaaatgttttttaaaaagttagcgtattaacataataaa 55327498  T

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Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 31894020 - 31894056
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31894020 tcaatcacatttaatttattttagaaaaacatgttat 31894056  T

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Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 13082856 - 13082943
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 179  Q
    ||||||||||||||||  |||||| || | ||| ||  |||| ||||| |||| ||||||||| |||||| |||||||||| ||||||    
T  13082856 ggtgtgtttggatggagggtttagaagagaaagagagaggaaggtttaatttttatttttaaaatacggacactatgaaatgtttttt 13082943  T

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Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 55428619 - 55428552
Alignment:
Q  94 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||| ||  |||||||||||||||||| ||||   |||||||||| | |||||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacgga 55428552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 23028168 - 23028086
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatat 174  Q
    ||||||||||||||||  |||| |||||||||  || || |    |||||||| |||||||||||||||| ||||||||||||    
T  23028168 ggtgtgtttggatggagggtttgggaggggaaaagagggcaggacttactttttatttttaaattacggacactatgaaatat 23028086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 6803442 - 6803377
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 158  Q
    |||||||||||| ||| ||||||||||||||| || | ||  ||||| ||||| ||||||||||||    
T  6803442 gtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattac 6803377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 21773788 - 21773853
Alignment:
Q  96 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||| ||| |||||||||||||||||| || |  || |||||||| ||| |||||||||||    
T  21773788 tgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacgga 21773853  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 24560219 - 24560288
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||||||||||||  |  |||||||||||||||||| ||||  ||||  ||||| |||||||||||||||    
T  24560219 ggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacgga 24560288  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 30200312 - 30200264
Alignment:
Q  113 taggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||||| || |  ||||||||||| |||||||||||||||    
T  30200312 taggaggggaagggagggaagggtttacttttcttttttaaattacgga 30200264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 54574493 - 54574529
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  54574493 tcaatcacgcttaatttattttagaaaaacgtgttat 54574529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 9e-45; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 94 - 250
Target Start/End: Complemental strand, 8530039 - 8529875
Alignment:
Q  94 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 193  Q
    |||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8530039 tgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaatattttttaaaaagttaacata 8529940  T
Q  194 ttaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||| |||        |||| || ||||||||||||||||||||| | |||||||||||||    
T  8529939 ttaacatggtaaacgatcatataatacttcaatcacacttaatttatttaaaaaaaacatgttat 8529875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 40094935 - 40095102
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||||||||||||| | ||||  ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  40094935 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaaca 40095034  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttag-aaaaacatgttat 250  Q
     |||||||||||||        |||| || |||||||||||||||||||||||| |||||||||||||    
T  40095035 aattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaaacatgttat 40095102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 30010574 - 30010408
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||| ||||||||||| ||||  |||||||||||||||| |||||||||| |||| ||||| ||||||||| ||||||||    
T  30010574 ggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggacactacgaaatgttttttaaatagttaaca 30010475  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||| ||||        |||| || |||| ||||||||||||||||||||||||||||||||    
T  30010474 tattaacattataaacgatcatataatacttcaaccacacttaatttattttagaaaaacatgttat 30010408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 41498652 - 41498532
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 185  Q
    |||| |||||||||||||||| ||||||||||||| |||||| ||||   |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  41498652 tttagggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatgttttataaaaag 41498553  T
Q  186 ttaacatattaacatgataaa 206  Q
    |||||||||||||||||||||    
T  41498552 ttaacatattaacatgataaa 41498532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 12234257 - 12234086
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||| ||||| ||||||| |||||    
T  12234257 tttatggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggacactacgaaatgttttttataaagt 12234158  T
Q  187 taacatattaacatgat--------aaataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    || ||||||||||| ||        | || | || |||||||||||| ||||||||||||||||||||||||    
T  12234157 tagcatattaacataatatatgatcatattatacatcaatcacacttgatttattttagaaaaacatgttat 12234086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 38509891 - 38510062
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||| ||||||||||||| ||  ||||||||||||||||||  |||  ||| ||||||||||||||||||||||| |||||||||| | ||||||||| |    
T  38509891 tttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatgtcttttaaaaaat 38509990  T
Q  187 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||| |||||| |||||        |||| || |||||||||||| ||||||||||||||||||||||||    
T  38509991 taacatcttaacacgataaacgataatataatacttcaatcacacttgatttattttagaaaaacatgttat 38510062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 2858934 - 2859100
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||||||||| |||||| ||||  ||||||||||||||| |||||||| ||  ||||||||| || |||||||||||||||    
T  2858934 ggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaatgttatttaaaaagttaaca 2859033  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    || | |||| ||||        |||| || |||||||||||||||||||||| ||||||||||||||    
T  2859034 tacttacattataaacaatcatataatacttcaatcacacttaatttatttttgaaaaacatgttat 2859100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 32951366 - 32951484
Alignment:
Q  138 tacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatt 229  Q
    |||||||||||||||||||||||| || ||||||| |||| |||||||||||||||||||||||||||        |||| || ||||||||||||||||    
T  32951366 tacttttcatttttaaattacggacacaatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcaatcacacttaatt 32951465  T
Q  230 tattttagaaaaacatgtt 248  Q
    |||||||||||||||||||    
T  32951466 tattttagaaaaacatgtt 32951484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 43551993 - 43552108
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||| ||||||||||||||||| ||||||| || ||| ||||| ||  ||||| |||||||||||||||||||     |||||||| |||||||||||||    
T  43551993 tttagggtgtgtttggatggaaggtttaggcggcgaaaggatgtgagggtttatttttcatttttaaattacgt----tatgaaatgttttttaaaaagt 43552088  T
Q  187 taacatattaacatgataaa 206  Q
    ||||||||||||||||||||    
T  43552089 taacatattaacatgataaa 43552108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 49946633 - 49946756
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    ||||| || |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||        |||| || ||||||||| |||    
T  49946633 gtttatttgtcatttttaaattacggacactataaaatatttttttaaaagttaacatattaacatgataaattatcatataatacttcaatcacattta 49946732  T
Q  227 atttattttagaaaaacatgttat 250  Q
    |||||||||| |||||||||||||    
T  49946733 atttattttaaaaaaacatgttat 49946756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 35349468 - 35349578
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||| ||||||| |||  ||||  ||||||||||||||||||||||||||| |||  ||||| |||| |||||||||||||    
T  35349468 ggtgtgtttggatggagggtttaagaggggagggg--gggagggtttacttttcatttttaaattacggacact--gaaatgttttataaaaagttaaca 35349563  T
Q  192 tattaacatgataaa 206  Q
    |||||||||||||||    
T  35349564 tattaacatgataaa 35349578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 20576136 - 20576247
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    |||||||||||| ||  |||||||||||||||||| ||||  |||||  |||||||||||||||||||| ||  |||||| ||||||||| |||||| ||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggacac--tgaaatgttttttaaagagttaatat 20576233  T
Q  193 attaacatgataaa 206  Q
    ||||||||||||||    
T  20576234 attaacatgataaa 20576247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 7444736 - 7444623
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    ||||||||||||| | ||||||| | |||||| || ||||  ||||| |||||||||| |||||||||| ||||| ||||  ||||||||||||||||||    
T  7444736 gtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggacactataaaatgatttttaaaaagttaacat 7444637  T
Q  193 attaacatgataaa 206  Q
    |||||||| |||||    
T  7444636 attaacataataaa 7444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 36285619 - 36285741
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    ||||| || |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||        |||| || ||||||||||||     
T  36285619 gtttatttatcatttttaaattacgaacactataaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttg 36285718  T
Q  227 atttattttagaaaaacatgtta 249  Q
    || ||||||| ||||||||||||    
T  36285719 atatattttaaaaaaacatgtta 36285741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 51597866 - 51597744
Alignment:
Q  136 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 227  Q
    ||||||||||| |||||||||| | | ||||||||||  ||||||||||||||||||||||| |||||||        |||| || ||||||||||||||    
T  51597866 tttacttttcaattttaaattatgaacactatgaaatggtttttaaaaagttaacatattaagatgataaacaatcatataatacttcaatcacacttaa 51597767  T
Q  228 tttattttagaaaaacatgttat 250  Q
    ||||||||| |||||||||||||    
T  51597766 tttattttaaaaaaacatgttat 51597744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 50744332 - 50744449
Alignment:
Q  142 tttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttat 232  Q
    |||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||        |||| || |||||||||||||||||||    
T  50744332 tttcatttttaaattacggacactatgaaatgtttttttaaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttat 50744431  T
Q  233 tttagaaaaacatgttat 250  Q
    |||||| |||| ||||||    
T  50744432 tttagagaaacctgttat 50744449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 28770969 - 28770852
Alignment:
Q  86 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 185  Q
    ||||| ||||||||||||||||| ||||||||||| || |||  |||  ||||| |||| |||||||||||||  | | |||||||| |||| ||||||     
T  28770969 ttttagggtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaattac--acattatgaaatgttttataaaaaa 28770872  T
Q  186 ttaacatattaacatgataa 205  Q
    ||||||||||||||||||||    
T  28770871 ttaacatattaacatgataa 28770852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 250
Target Start/End: Original strand, 45585739 - 45585853
Alignment:
Q  144 tcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttatttt 235  Q
    ||||||||||||||  |||||||| |||| |||||| |||||||||||||||||||||||||        |||  || || |||||||||||||||||||    
T  45585739 tcatttttaaattatagatactataaaatgtttttttaaaagttaacatattaacatgataaacgatcatatagtacttcgatcacacttaatttatttt 45585838  T
Q  236 agaaaaacatgttat 250  Q
    | |||||||||||||    
T  45585839 aaaaaaacatgttat 45585853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 6563775 - 6563653
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa-------ataacacctcaatcacacttaa 227  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| ||||||| |||||||||||||||       |||| |  ||||| |||| |||    
T  6563775 gtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaacatgataaagatcatataataattcaatgacacataa 6563676  T
Q  228 tttattttagaaaaacatgttat 250  Q
    ||||||||||||| |||||||||    
T  6563675 tttattttagaaagacatgttat 6563653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 250
Target Start/End: Original strand, 26940874 - 26941011
Alignment:
Q  121 gaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacac 212  Q
    |||| |||||||  ||| |||||| ||||||||||||  || |||||||||||||| || |||||||||| |||||||||  |||        |||| ||    
T  26940874 gaagagatgggagggttcactttttatttttaaattatagacactatgaaatatttgtttaaaagttaacttattaacatcgtaaacagtcatataatac 26940973  T
Q  213 ctcaatcacacttaatttattttagaaaaacatgttat 250  Q
     |||||||||||| ||||||||||||||||||||||||    
T  26940974 ttcaatcacacttgatttattttagaaaaacatgttat 26941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 32951566 - 32951491
Alignment:
Q  86 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||| ||||||||||||| || |||||||||| |||||||| ||||  ||||||||||| |||||||||||||||    
T  32951566 ttttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacgga 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 10392072 - 10391951
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactt 225  Q
    ||||||||||| ||||||||||||  | | ||| ||||  ||||||||||||||||||||||||||||||||        |||| || | ||||||| ||    
T  10392072 gtttacttttcgtttttaaattacaaacattattaaatgtttttttaaaaagttaacatattaacatgataaacggtcatataatactttaatcacaatt 10391973  T
Q  226 aatttattttagaaaaacatgt 247  Q
    ||||||||||||||||||||||    
T  10391972 aatttattttagaaaaacatgt 10391951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 40964798 - 40964726
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatatt-ttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||||||||||||||||||||| ||  | ||||||| |||| |||||||||||||||||| |||||||    
T  40964798 gtttacttttcatttttaaattacggacaccgtcaaatattttttttaaaagttaacatattaacgtgataaa 40964726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 242
Target Start/End: Complemental strand, 41676480 - 41676363
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaa--aagttaacatattaacatgataa--------ataacacctcaatcacact 224  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||     || ||||||||||||||||||||        |||| ||  ||||||||||    
T  41676480 gtttacttttcatttttaaattacggacactataaaatgtttttttttttaaattaacatattaacatgataaacgatcatataatactacaatcacact 41676381  T
Q  225 taatttattttagaaaaa 242  Q
    ||||||||||||||||||    
T  41676380 taatttattttagaaaaa 41676363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 2859169 - 2859105
Alignment:
Q  97 gtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||||||| ||| |||||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacgga 2859105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 23536777 - 23536844
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 154  Q
    |||||||||||||||||||||   ||||||||| |||||||||||| |||||| |||||  |||||||    
T  23536777 tttatggtgtgtttggatggaggatttaggaggagaagggatgggagtgtttaattttctattttaaa 23536844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 35349709 - 35349635
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||| |||||||||||||  |  ||||| |||||||||||| ||||  ||||||||||| |||||||||||||||    
T  35349709 tttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacgga 35349635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 30010334 - 30010403
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  |||||||||||||||||| ||||   |||||||||| | |||||||||||||    
T  30010334 ggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacgga 30010403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 41498406 - 41498471
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 157  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||    
T  41498406 ggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaatta 41498471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 2470727 - 2470819
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 179  Q
    |||| ||||||||||||||||  ||||||||||||||| ||  |||  ||||  ||| ||||||||||||||| | ||||| |||| ||||||    
T  2470727 tttagggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaatgtttttt 2470819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 2506781 - 2506689
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 184  Q
    |||||||||||||||| ||||||| || |||||||| | ||    ||| ||||| |||||||||||| |||| ||| ||||| ||||||||||    
T  2506781 ggtgtgtttggatggagagtttagaagaggaagggaggagatgacttagttttcttttttaaattacagatattataaaataatttttaaaaa 2506689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 44211037 - 44211073
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||||||||||| |||||    
T  44211037 tcaatcacacttaatttattttagaaaaacacgttat 44211073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 35513037 - 35512974
Alignment:
Q  94 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 157  Q
    ||||||||||||||  |||||||||||||||||| ||||  | ||||||||  |||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaatta 35512974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 10391893 - 10391943
Alignment:
Q  111 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||||||||||||  || ||||  |||||||||||||||||||||||||||    
T  10391893 tttaggaggggaaacgaggggagggtttacttttcatttttaaattacgga 10391943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 12233999 - 12234081
Alignment:
Q  79 atggttgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||||| ||| | ||||||||||||| ||  |||||||||||||||||| || |  | ||| ||||| |||||||||||||||    
T  12233999 atggttttttaagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacgga 12234081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 20607459 - 20607410
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttact 141  Q
    ||||||||||||||||  |||||||||||||||||| ||||  |||||||    
T  20607459 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttact 20607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 25268510 - 25268437
Alignment:
Q  88 ttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||| | ||||||||||  |||||| |||||||| || ||||  ||||||||| | |||||||||||||||    
T  25268510 ttatggtatatttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacgga 25268437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 40709294 - 40709391
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 189  Q
    |||||||||||||  || ||||| ||||||||||||  |||    ||||||||| ||||||||||||| ||| ||| ||||| |||||| ||| ||||    
T  40709294 ggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacgaatattataaaataatttttagaaaattaa 40709391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 7444481 - 7444549
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||| |||| ||  |||| ||||| ||||||| ||||  ||||||||||| |||||||||||||||    
T  7444481 gtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacgga 7444549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 38510135 - 38510067
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||  |  |||||||||||||||||| ||||  ||||| ||||| |||||||| ||||||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacgga 38510067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 96 - 250
Target Start/End: Original strand, 31543078 - 31543240
Alignment:
Q  96 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 195  Q
    ||||||||||||  ||||| |||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  31543078 tgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgtttttaaaaaagttaacatatt 31543177  T
Q  196 aacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||| ||||        |||| || |||||||||||||||||||||||||||||||||||||    
T  31543178 aacatcataaacggtcatataatacttcaatcacacttaatttattttagaaaaacatgttat 31543240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 250
Target Start/End: Original strand, 11575415 - 11575574
Alignment:
Q  98 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 197  Q
    ||||||||||   |||||||| |||||||| ||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11575415 tttggatggaggatttaggagaggaaggga-gggagggtttacttttcattcttaaattaaggatactatgaaatgttttttaaaaagttaacatattaa 11575513  T
Q  198 catgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||        |||| || | |||||||||||||||||||||||||||||||||||    
T  11575514 catgataaacgatcatataatactttaatcacacttaatttattttagaaaaacatgttat 11575574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 34634385 - 34634277
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    |||||||||||||||| ||||||||||||||||||||| ||  ||| | |||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  34634385 ggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggacactatgaaatatcttttaaaaagttaaca 34634286  T
Q  192 tattaacat 200  Q
    |||||||||    
T  34634285 tattaacat 34634277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 11785768 - 11785602
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||||||||| ||| || ||||  ||||  ||||||||||||||||||||| | |||||||||||||||||||||||| ||    
T  11785768 ggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaatattttttaaaaagttagca 11785669  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||        |||| || |||||| || ||||| |||||||||||||||||||||    
T  11785668 tattaacatgataaacaaacatataatacttcaatcgcaattaatgtattttagaaaaacatgttat 11785602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 31738665 - 31738499
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||||||||||||  | ||||  |||||  |||||||||||||||||||| ||||| ||||||||||| || ||||||||    
T  31738665 ggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaatattttttgaagagttaaca 31738566  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||        |||| || ||||| |||||||||||||| |||| |||||||||||    
T  31738565 tattaacatgataaatgatcatataatacttcaattacacttaatttattctagagaaacatgttat 31738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 1026894 - 1027012
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    |||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||||||||||||||||        |||| || ||||||| |||||    
T  1026894 gtttacttttcatttttaaattgcggacactatgaaatattttatcaaaagttaacatattaacatgataaacgatcatataatacttcaatcatactta 1026993  T
Q  227 atttattttagaaaaacat 245  Q
    |||||||||||||||||||    
T  1026994 atttattttagaaaaacat 1027012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 1281341 - 1281219
Alignment:
Q  136 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 227  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||        |||| || |||| ||||||| |    
T  1281341 tttagttttcatttttaaattacggacactatgaaatattttttaaaaagttaacatattaacataataaacgataatataatacttcaaccacacttga 1281242  T
Q  228 tttattttagaaaaacatgttat 250  Q
    ||||| |||||||||||||||||    
T  1281241 tttatcttagaaaaacatgttat 1281219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 250
Target Start/End: Original strand, 3726859 - 3727023
Alignment:
Q  86 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 185  Q
    ||||| ||||||||||||||||  ||||||||||||||||||  |||  ||||| ||||||||||||||||||||| || ||| ||| ||||||||| ||    
T  3726859 ttttagggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggacaccatggaatgttttttaaatag 3726958  T
Q  186 ttaacatattaacatgataaataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||  |||   |  | |||| |  |||||||  ||||||||||||||||||||||||||||    
T  3726959 ttaacatgataaacggtcatataatatttcaatcatgcttaatttattttagaaaaacatgttat 3727023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 250
Target Start/End: Complemental strand, 16653190 - 16653025
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    ||||||||||||| |  ||||| |||||||||||| | ||  ||||| ||||||||||||||||||||| | |||||||| ||||| |||||||||||||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgtttttgaaaaagttaacat 16653091  T
Q  193 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||  ||||        |||| || |||||||||||| |||||||||| |||||||||||||    
T  16653090 attaacaaaataaacgatcatataatacttcaatcacacttgatttattttataaaaacatgttat 16653025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 129 - 250
Target Start/End: Complemental strand, 30664566 - 30664437
Alignment:
Q  129 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatca 220  Q
    ||||||||||| |||||| |||||||||||||| | ||  ||||||||||||||||||||||||||||| |||||||        |||| || |||||||    
T  30664566 gggaatgtttatttttcagttttaaattacggacattacaaaatattttttaaaaagttaacatattaatatgataaacggttatataatacttcaatca 30664467  T
Q  221 cacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||| ||||||||||||||    
T  30664466 cacttaatttatttttgaaaaacatgttat 30664437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 30479721 - 30479881
Alignment:
Q  94 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 193  Q
    ||||||||||||||   ||||||||||| | ||| ||||  ||| |||||||||||||||||||| || |||||||||| | ||||||||||||||||||    
T  30479721 tgtgtttggatggaggatttaggagggggatggaggggagagttcacttttcatttttaaattacagacactatgaaatgtcttttaaaaagttaacata 30479820  T
Q  194 ttaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatg 246  Q
    ||||  ||||||        |||| || |||||||||||| ||||||||||||||||||||    
T  30479821 ttaaggtgataaatgataatataatacttcaatcacacttgatttattttagaaaaacatg 30479881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 96 - 206
Target Start/End: Complemental strand, 36309081 - 36308971
Alignment:
Q  96 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 195  Q
    ||||||||||||  |||||||||||||||||| ||||  ||||||||||||| ||||||||||| | | | |||||||| |||| |||||| ||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacgtacattgtgaaatatatttttaaaagtaaacatatt 36308982  T
Q  196 aacatgataaa 206  Q
    |||||||||||    
T  36308981 aacatgataaa 36308971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 29690925 - 29691038
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    ||||||||||||| |||||||||||||  ||| || | ||  ||||||||||||||| |||  ||| ||||||| ||||||||||| |||||||||||||    
T  29690925 gtgtgtttggatgaaaagtttaggaggaaaagagacgagagagtttacttttcatttataacatactgatactaggaaatatttttaaaaaagttaacat 29691024  T
Q  193 attaacatgataaa 206  Q
    ||||||||||||||    
T  29691025 attaacatgataaa 29691038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 6315255 - 6315138
Alignment:
Q  141 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttat 232  Q
    |||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||| ||||||        |||| || |||||||||||||||||||    
T  6315255 ttttcatttttaaaatacggacactatgaaatgtttttaaaaaaattaacatattaacttgataaacgatcgtataatacttcaatcacacttaatttat 6315156  T
Q  233 tttagaaaaacatgttat 250  Q
    ||||||||||||||||||    
T  6315155 tttagaaaaacatgttat 6315138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 7502999 - 7503122
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    |||| |||| ||||||||||||||  | |||||||||| |||| |||||||||||||||||||||||||||        |||| || | |||||||||||    
T  7502999 gtttgctttccatttttaaattaccaaaactatgaaatgttttataaaaagttaacatattaacatgataaacaatcatataatactttaatcacactta 7503098  T
Q  227 atttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||||    
T  7503099 atttattttagaaaaacatgttat 7503122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 29358385 - 29358507
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||        |||| || |||||||||||||    
T  29358385 gtttactttttatttttaaattacggacactataaaatattttttaaaaa-ttaacatattaacattataaacgatcctataatacttcaatcacactta 29358483  T
Q  227 atttattttagaaaaacatgttat 250  Q
    ||||||| |||||||| |||||||    
T  29358484 atttattctagaaaaatatgttat 29358507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 37923123 - 37923246
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    ||||||||||||||||||||||| | | |||||||||| ||||||||| |||||| |||||||||||||||        |||| |  | |||| ||||||    
T  37923123 gtttacttttcatttttaaattatgaacactatgaaatgttttttaaagagttaaaatattaacatgataaatgatcatataatattttaatcgcactta 37923222  T
Q  227 atttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||||    
T  37923223 atttattttagaaaaacatgttat 37923246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 2248666 - 2248528
Alignment:
Q  120 ggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataaca 211  Q
    |||||||| ||||  ||| |||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||  |||        |||| |    
T  2248666 ggaagggaggggagggttcactttttatttttaaattacggacactatgaaatatttttttaaaagttaacttattaacatcgtaaacggtcatataata 2248567  T
Q  212 cctcaatcacacttaatttattttagaaaaacatgttat 250  Q
       ||||||||||| ||||||||||||||||||||||||    
T  2248566 ttccaatcacacttgatttattttagaaaaacatgttat 2248528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 9718530 - 9718595
Alignment:
Q  141 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||| |||||||||||||||||    
T  9718530 ttttcatttttaaattacggacactatgaaatggtttttaaaaagttagcatattaacatgataaa 9718595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 41103506 - 41103674
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa--ttacggatactatgaaatattttttaaaaagttaa 189  Q
    ||||||||||||||||  ||||||||||||||| || ||||  ||||  ||||| ||||||||  ||| ||| |||||||||  ||||| ||||| ||||    
T  41103506 ggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaaaattatggacactatgaaacgtttttaaaaaaattaa 41103605  T
Q  190 catattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
     | | ||||||||||||        ||| || |||||||||||||||||||||||||||||||||||||    
T  41103606 aacaataacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttat 41103674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 28083934 - 28083818
Alignment:
Q  142 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttatt 233  Q
    |||| ||||||||||||||||||||||| || ||||||||| ||||||||| | ||||||||||        |||| ||  |||||||||||||||||||    
T  28083934 tttcttttttaaattacggatactatgatatgttttttaaagagttaacatgtcaacatgataaacaatcatataatactccaatcacacttaatttatt 28083835  T
Q  234 ttagaaaaacatgttat 250  Q
    ||||| |||||||||||    
T  28083834 ttagagaaacatgttat 28083818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 11033659 - 11033545
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaaca 191  Q
    |||| ||| ||||||  |||||||||| ||||||| | |||  ||||||||||| |||||||||| | ||| ||||||||  ||||||||||| ||||||    
T  11033659 gtgtctttagatggagggtttaggaggagaagggaggagaagatttacttttcaattttaaattatgaatattatgaaatgtttttttaaaaaattaaca 11033560  T
Q  192 tattaacatgataaa 206  Q
    |||||||||||||||    
T  11033559 tattaacatgataaa 11033545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 43732929 - 43732860
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  43732929 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 43732860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 10028347 - 10028259
Alignment:
Q  110 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatt-ttttaaaaagttaacatattaa 197  Q
    ||||||||| ||||| || ||||  |||||||||| | |||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  10028347 gtttaggagaggaagtgaggggagggtttactttttacttttaaattacggacactatgaaatattttttttaaaagttaacatattaa 10028259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 7979340 - 7979265
Alignment:
Q  134 tgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 209  Q
    |||||||||||||||||||||||||||| ||  |||||| ||| ||||||  ||||| ||||||||||||||||||    
T  7979340 tgtttacttttcatttttaaattacggacaccgtgaaatgtttattaaaagtttaacttattaacatgataaataa 7979265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 37032561 - 37032455
Alignment:
Q  152 aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaac 243  Q
    |||||||||| |||| ||| | |||||||||||||||||||||||| |||||||        |||| || | ||||||||||||||||||||| ||||||    
T  37032561 aaattacggacactaggaagtgttttttaaaaagttaacatattaagatgataaactatcatataatactttaatcacacttaatttattttaaaaaaac 37032462  T
Q  244 atgttat 250  Q
    |||||||    
T  37032461 atgttat 37032455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 4247563 - 4247633
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    |||||||||| |||||||||||||||  ||| | ||||||||||||| |||||||||||||| |||||||||    
T  4247563 gtttactttttatttttaaattacggc-actttaaaatattttttaagaagttaacatattagcatgataaa 4247633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 9718730 - 9718656
Alignment:
Q  83 ttgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 157  Q
    |||||| | ||||||||||||| ||  |||||||||| ||||||| ||||| ||||||||||| |||||||||||    
T  9718730 ttgtttcagggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaatta 9718656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 1281149 - 1281214
Alignment:
Q  96 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||| ||  |||||||||||||||||||| ||  ||||||||||| |||||||||||||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacgga 1281214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 16024394 - 16024327
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||||||||||||||   ||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacgga 16024327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 42650468 - 42650504
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  42650468 tcaatcacacttaatttattttagaaaaacatgttat 42650504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 31543319 - 31543249
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 157  Q
    |||| ||||||||| ||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||    
T  31543319 tttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatta 31543249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 35694828 - 35694862
Alignment:
Q  163 actatgaaatattttttaaaaagttaacatattaa 197  Q
    |||||||||||||||||||||||||||||||||||    
T  35694828 actatgaaatattttttaaaaagttaacatattaa 35694862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 13405178 - 13405104
Alignment:
Q  136 tttacttttcatttttaaattacggatactatgaaatattttttaaaaag----ttaacatattaacatgataaa 206  Q
    |||||||||||||||||||||||||| | ||  ||||||||||| |||||    ||||| |||||||||||||||    
T  13405178 tttacttttcatttttaaattacggacattaaaaaatatttttttaaaagtgaattaacgtattaacatgataaa 13405104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 40990183 - 40990352
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatt-acggatactatgaaatatttttt--aaaaagtta 188  Q
    ||||||||||||||||  |||| ||||  ||| ||| ||||  |||||  |||||||||| |||| |  || |||||||||| ||||||  ||| |||||    
T  40990183 ggtgtgtttggatggagggtttgggagaagaaaggaggggagggtttatatttcattttttaatttatagacactatgaaatgttttttttaaagagtta 40990282  T
Q  189 acatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||        |||| || ||||||| ||||||||||||||| | |||||||||||    
T  40990283 acatattaacatgataagcgatcatataatacttcaatcagacttaatttattttaaagaaacatgttat 40990352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 2248454 - 2248522
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgg 160  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||| | ||| | ||||||||||||||    
T  2248454 ggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacgg 2248522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 8815383 - 8815316
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 159  Q
    ||||||||||||| ||  |||||||||||| ||||| ||||  ||| |||||| ||||||||||||||    
T  8815383 ggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacg 8815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 24243052 - 24243164
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    |||||||||||||||| |||||| || ||||||||| ||||    |||||||||||||| ||||||| || ||||| |||| | ||||||||| || | |    
T  24243052 ggtgtgtttggatggagagtttaaga-gggaagggaagggatgacttacttttcattttgaaattac-gacactataaaatgtcttttaaaaa-ttgaaa 24243148  T
Q  192 tattaacatgataaat 207  Q
    || |||||||||||||    
T  24243149 taataacatgataaat 24243164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 5562012 - 5562058
Alignment:
Q  137 ttacttttcatttttaaattacggatactatgaaatattttttaaaa 183  Q
    ||||||||||||||||||||||| ||| ||| || ||||||||||||    
T  5562012 ttacttttcatttttaaattacgtataatataaattattttttaaaa 5562058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 7394701 - 7394636
Alignment:
Q  94 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 159  Q
    ||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||  |||||||||||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacg 7394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 30365126 - 30365219
Alignment:
Q  86 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 179  Q
    ||||| ||||||||||||| ||  |||||||||| ||| ||| ||||  ||| |||||| |||||||||||||| | |  || |||||||||||    
T  30365126 ttttagggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttt 30365219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 42919912 - 42919879
Alignment:
Q  150 ttaaattacggatactatgaaatattttttaaaa 183  Q
    |||||||||||||||||| |||||||||||||||    
T  42919912 ttaaattacggatactataaaatattttttaaaa 42919879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 7503202 - 7503126
Alignment:
Q  86 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggat 162  Q
    ||||| ||||||||||||| ||   ||| |||||||| |||| ||||  ||||||||||| ||||||||||| ||||    
T  7503202 ttttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggat 7503126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 11033529 - 11033497
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatg 246  Q
    |||||||||| ||||||||||||||||||||||    
T  11033529 tcaatcacacataatttattttagaaaaacatg 11033497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 11575646 - 11575582
Alignment:
Q  94 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 158  Q
    |||||||||||  |  |||||||| | ||||||| ||||  ||||||||||||||||||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattac 11575582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 33922680 - 33922648
Alignment:
Q  174 ttttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||||||||||||||||| |||||||||    
T  33922680 ttttttaaaaagttaacatattatcatgataaa 33922648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 36347543 - 36347709
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    |||||||||||||| |  |||||||||||||||||| | ||  ||| |||||||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  36347543 ggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacggatactatgacatattttttaaatagttaaca 36347642  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||        |||| || |||||||||||||||||||||||||||||||||||||    
T  36347643 tattaacatgataaacaattatataatacttcaatcacacttaatttattttagaaaaacatgttat 36347709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 90 - 250
Target Start/End: Original strand, 8426879 - 8427039
Alignment:
Q  90 atggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 189  Q
    ||||||| |||| ||||| ||||||||||||||||||| ||||  |||||||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  8426879 atggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatgttttttaaaaagttaa 8426978  T
Q  190 catattaacatgat-aaataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||  ||| ||||| | |||| || |||||| ||||||||||||||||||||||||||||||    
T  8426979 catgataa-atgatcatataatacttcaatcgcacttaatttattttagaaaaacatgttat 8427039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 23748337 - 23748171
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||| |||||||||||||||| |||||| |||||||||| | ||||||||||||||||    
T  23748337 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtcttttaaaaagttaaca 23748238  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||        |||| || |||||||||||| ||||||||| ||||||||||||||    
T  23748237 tattaacatgataaacgataatataatacttcaatcacacttgatttatttttgaaaaacatgttat 23748171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 129 - 250
Target Start/End: Original strand, 15224733 - 15224862
Alignment:
Q  129 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatca 220  Q
    |||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||        |||| || |||||||    
T  15224733 gggagtgtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaatgatcatataatacttcaatca 15224832  T
Q  221 cacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||| ||||||||||||||||    
T  15224833 cacttaatttattctagaaaaacatgttat 15224862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 133 - 250
Target Start/End: Complemental strand, 16565978 - 16565853
Alignment:
Q  133 atgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacact 224  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| || |||||||        |||| || |||||||||||    
T  16565978 atgtttactttttatttttaaattacggatactatgaaacgttttttaaaaagttaacatataaatatgataaacgatcatataatacttcaatcacact 16565879  T
Q  225 taatttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||||||    
T  16565878 taatttattttagaaaaacatgttat 16565853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 36046206 - 36046321
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||||||||||||  || ||||  ||||| ||||||||||||||||||||| ||||  |||| ||||||||||||||||||    
T  36046206 ggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggacactagaaaatgttttttaaaaagttaaca 36046305  T
Q  192 tattaacatgataaat 207  Q
    |||||||||| |||||    
T  36046306 tattaacatgttaaat 36046321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 36566874 - 36567019
Alignment:
Q  114 aggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaa-tattttttaaaaagttaacatattaacatgataa------- 205  Q
    |||||||||||||||| ||   |||||||||||||||||||||||||| | ||||||| | |||| |||||||||||||||||||||||||||           
T  36566874 aggaggggaagggatgagaggatttacttttcatttttaaattacggacattatgaaagttttttataaaaagttaacatattaacatgataaatgatca 36566973  T
Q  206 -ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
     |||| || ||||||||| |||||||||| ||||||||||||||||    
T  36566974 tataatacttcaatcacaattaatttattatagaaaaacatgttat 36567019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 39732774 - 39732894
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    ||||||||||||||||||||||||| | | |||||||| |||| |||||||||||||||||||||||||||        |||| || ||||||| |||||    
T  39732774 gtttacttttcatttttaaattacgaacattatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcatactta 39732873  T
Q  227 atttattttagaaaaacatgt 247  Q
    |||||||||||||||||||||    
T  39732874 atttattttagaaaaacatgt 39732894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 34209706 - 34209592
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    |||||||||||||| |  |||||| | |||| |||| || |  | ||||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  34209706 ggtgtgtttggatgaagggtttagaatgggaggggagggaagagattacttttcatttttaaattacaaacactatgaaatattttttaaaaagttaaca 34209607  T
Q  192 tattaacatgataaa 206  Q
    |||||||||||||||    
T  34209606 tattaacatgataaa 34209592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 9631802 - 9631688
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||||||||| ||||||   ||  ||| ||||||| ||||||||||||||| || ||||||| |  |||||||||||||||    
T  9631802 ggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggacaccatgaaatgtcctttaaaaagttaaca 9631703  T
Q  192 tattaacatgataaa 206  Q
    |||||||||||||||    
T  9631702 tattaacatgataaa 9631688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 19566822 - 19566989
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaac 190  Q
    |||||||||||| |||  |||||| |||| ||| ||  |||  |||||||| ||| ||||||||||| || ||||||||||  ||||||||||||||| |    
T  19566822 ggtgtgtttggacggagtgtttagaagggaaagagaatggagggtttacttctcagttttaaattacagacactatgaaatgtttttttaaaaagttagc 19566921  T
Q  191 atattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||| |||||||        |||| || |||||||||||||||||||||||||||||||||||||    
T  19566922 atattaaaatgataaacggtcgtataatacttcaatcacacttaatttattttagaaaaacatgttat 19566989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 39821868 - 39821745
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    ||||| ||||| ||||||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||        |||| || | |||| ||||||    
T  39821868 gtttagttttcttttttaaattacggacactatgaaataatatttaaagagttaacatattaacatgataaatgatcttataatacttaaatcgcactta 39821769  T
Q  227 atttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||||    
T  39821768 atttattttagaaaaacatgttat 39821745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 27926752 - 27926681
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||| ||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||||||||    
T  27926752 gtttatttttcatttttaaattacggatactattaaattttggttaaaaagttaacatattaacatgataaa 27926681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 251
Target Start/End: Original strand, 31795772 - 31795938
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    |||||||||||||||  ||||| |||| ||||||| ||||    ||||||||| ||||||||||||||| |||||||||  |||||| ||||  ||| ||    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaat 31795871  T
Q  193 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatt 251  Q
    |  ||||||||||        |||| || ||||||||||||||||||||||| ||||||||||||||    
T  31795872 aacaacatgataaacgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatt 31795938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 40022615 - 40022446
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaac 190  Q
    |||||| |||||||||  ||||| |||| ||||||| ||||  |||||| ||||||||||||||||| || ||||||||||  ||||||||||||| |||    
T  40022615 ggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaaagtaaac 40022516  T
Q  191 atat--taacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||  ||| ||| |||        |||| || ||||||||||||||||||||||| |||||||||||||    
T  40022515 atattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacatgttat 40022446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 42316809 - 42316880
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    |||||||||||||||||||||| |  | |||||||||| ||||||||||||||||| |||||||||||||||    
T  42316809 gtttacttttcatttttaaattgcaaacactatgaaatgttttttaaaaagttaacgtattaacatgataaa 42316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 17379994 - 17379897
Alignment:
Q  152 aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaa 241  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||||||||||||        |||| ||  |||||||||||||||||||||||||||    
T  17379994 aaattacggacactatgaaatgttttttaaaaagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaa 17379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 1583272 - 1583222
Alignment:
Q  139 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 189  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1583272 acttttcatttttaaattacggacactatgaaatgttttttaaaaagttaa 1583222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 28262500 - 28262611
Alignment:
Q  147 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttaga 238  Q
    ||||||||||| | | ||||||||||||||||||||||||||| ||| ||||||||||||        ||| |  |||||||||  ||||||||||||||    
T  28262500 tttttaaattatgaacactatgaaatattttttaaaaagttaatataataacatgataaacgatcatgtaatatttcaatcacatgtaatttattttaga 28262599  T
Q  239 aaaacatgttat 250  Q
    ||||||||||||    
T  28262600 aaaacatgttat 28262611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 7681443 - 7681386
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  7681443 gtttactttttatttttaaattgcggatattatgaaatatttttttaaaagttaacat 7681386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 206
Target Start/End: Complemental strand, 12541999 - 12541894
Alignment:
Q  96 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 195  Q
    ||||||||||||  |||||||||  ||||||| ||| |  ||||||||||||    ||||||| |||||||| |||| |||||||||||||||||| |||    
T  12541999 tgtttggatggagggtttaggagaagaaggga-gggtagatttacttttcat----aaattacagatactataaaatgttttttaaaaagttaacacatt 12541905  T
Q  196 aacatgataaa 206  Q
    |||||||||||    
T  12541904 aacatgataaa 12541894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 36347783 - 36347714
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  36347783 ggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacgga 36347714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 35736429 - 35736337
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 184  Q
    ||||||||||||||||  |||||||||| ||||||| ||||  | | ||||||| |||||||||| |||| |||||||||  |||||||||||    
T  35736429 ggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggacactatgaaaagttttttaaaaa 35736337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 887351 - 887261
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaa 183  Q
    ||||||| |||||| || |||||||||||||||||| ||||  | ||||||||| |||||||||||||||| |||| |||| ||||| ||||    
T  887351 ggtgtgtctggatg-aaggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacggatgctataaaatgtttttaaaaa 887261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 45257555 - 45257456
Alignment:
Q  86 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 184  Q
    ||||| ||||||||||||||||   ||||||| ||||||||| | ||  ||||||||||| ||||||||||||||||| ||| |||| ||||||| ||||    
T  45257555 ttttagggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacggatattataaaatgattttttgaaaa 45257456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 9426985 - 9427053
Alignment:
Q  90 atggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 158  Q
    ||||||||||||||| |||||||||||||||||||||| | ||  ||||  ||||| ||||||||||||    
T  9426985 atggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattac 9427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 15224936 - 15224868
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgg 160  Q
    |||||||||||||  |  |||||||||||||||||| ||||  ||||||||||| ||||||||||||||    
T  15224936 ggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgg 15224868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 17380083 - 17380007
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatg 168  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||  ||||||||||||||||||||| ||||||    
T  17380083 ggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggacactatg 17380007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 29525768 - 29525847
Alignment:
Q  129 gggaatgtttacttttcatttttaaattacggatactatgaa--atattttttaaaaagttaacatattaacatgataaa 206  Q
    |||| |||| |||||||| ||||||||||| |||||||||||   | ||||||  |||||||||||||||||||||||||    
T  29525768 gggagtgttcacttttcaattttaaattactgatactatgaatttttttttttggaaagttaacatattaacatgataaa 29525847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 34187577 - 34187644
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 159  Q
    ||||||||||||| || |||||||||| |||||| | ||||| ||| |||||| ||||||||||||||    
T  34187577 ggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacg 34187644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 37739949 - 37740060
Alignment:
Q  146 atttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttag 237  Q
    ||||| |||||||| | |||||||| |  |||| |||||||||| ||||||||||||||||        ||| || ||||||||||||||||||||||||    
T  37739949 attttaaaattacgaacactatgaagt--ttttcaaaaagttaagatattaacatgataaacgatcatataatacttcaatcacacttaatttattttag 37740046  T
Q  238 -aaaaacatgttat 250  Q
     |||||||||||||    
T  37740047 aaaaaacatgttat 37740060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 39732978 - 39732901
Alignment:
Q  84 tgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||| ||||||||||||| ||| ||||  |||||||||| | ||||   |||||||||| |||||||||||||||    
T  39732978 tgttttagggtgtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacgga 39732901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 154
Target Start/End: Complemental strand, 8427110 - 8427051
Alignment:
Q  95 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 154  Q
    |||||||||| ||  ||||||||||| |||||| ||||  ||||||||||||||||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaa 8427051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 22356252 - 22356177
Alignment:
Q  86 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||| ||||||||||||| ||   ||||||||||||||||| ||||  ||| | ||||| |||||||||||||||    
T  22356252 ttttagggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacgga 22356177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 31061361 - 31061428
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 159  Q
    ||||||||||||| ||| |||||||||||||| ||||||||  | | ||||||  |||||||||||||    
T  31061361 ggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacg 31061428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 9427179 - 9427113
Alignment:
Q  141 ttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||||||||||||||| ||||| ||||  ||||||  ||||||| ||||||| |||||||||    
T  9427179 ttttcatttttaaattacggacactataaaatgtttttttttaaagttagcatattagcatgataaa 9427113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 35736172 - 35736246
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||| ||||||||||||| ||  |||||||||||||||||| ||||  | ||| ||||| ||||||||| |||||    
T  35736172 tttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacgga 35736246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 16713494 - 16713587
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 185  Q
    ||||||||| ||| ||  ||||| |||||||||||| ||||  ||| | |||| |||||||||||||| | | ||| ||||||||||| |||||    
T  16713494 ggtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattacgtacaatataaaatatttttttaaaag 16713587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 36046443 - 36046375
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  ||||| |||||||||||| ||| | ||||||||||  |||||||||||||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaaggga-ggggaggtttacttttgttttttaaattacgga 36046375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 6721754 - 6721786
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatg 246  Q
    |||||||||||| ||||||||||||||||||||    
T  6721754 tcaatcacacttgatttattttagaaaaacatg 6721786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 35736283 - 35736251
Alignment:
Q  218 tcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||| ||||||||||||||||||||||||    
T  35736283 tcacacttcatttattttagaaaaacatgttat 35736251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 41778885 - 41778849
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  41778885 tcaatcacacttaatttattttaaaaaaacattttat 41778849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 41841678 - 41841750
Alignment:
Q  86 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 158  Q
    ||||| ||||||||||||| ||   |||||||||| |||||||||||  ||||  ||||| ||||||||||||    
T  41841678 ttttaaggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattac 41841750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 87 - 245
Target Start/End: Complemental strand, 10650661 - 10650510
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||| ||||||||||||| |||||||| ||||||||||||| | ||| ||||||||||  |||||||||||||||||||||||||| |||| ||||||||    
T  10650661 tttagggtgtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacggatactatgaaatgttttataaaaagt 10650562  T
Q  187 taacatattaacatgataaataacacctcaatcacacttaatttattttagaaaaacat 245  Q
    |||||||||| ||||||       || ||||||||||||||||||||||||||||||||    
T  10650561 taacatattaccatgat-------acttcaatcacacttaatttattttagaaaaacat 10650510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 13634953 - 13634787
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  | ||||||||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  13634953 ggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgttttttaaaaagttaaca 13634854  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||        |||| |  |||||||||| ||||||||||||||||||||||||||    
T  13634853 tattaacatgataaacgatcatataataattcaatcacacataatttattttagaaaaacatgttat 13634787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 7544383 - 7544212
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||| ||||||||||||||||  |||||||||||||||| | ||||  ||||  ||||||||||||||||||||| |||||||||| |||||||||||||    
T  7544383 tttaaggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgttttttaaaaagt 7544284  T
Q  187 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    || ||||||||||| ||||        |||| || |||||||||||| ||||||||||||||||||||||||    
T  7544283 tagcatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttat 7544212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 8502837 - 8503003
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||| || ||||| ||||||||  ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  8502837 ggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggacattatgaaatattttttaaaaagttaaca 8502936  T
Q  192 tattaacatga--------taaataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
     ||||| ||||        || |||| || |||||||||||||||||||||||||||| ||||||||    
T  8502937 aattaatatgatacacaattacataatacttcaatcacacttaatttattttagaaaagcatgttat 8503003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 95 - 250
Target Start/End: Complemental strand, 36363271 - 36363108
Alignment:
Q  95 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 194  Q
    |||||||||||||  |||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||||| |||| | ||||| |||||||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatgtcttttagaaagttaacatat 36363172  T
Q  195 taacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    || ||||||||        |||| || ||||| |||||| ||||||||||||||||||||||||    
T  36363171 tagcatgataaacaatgatataaaacttcaatgacacttgatttattttagaaaaacatgttat 36363108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 1658055 - 1657955
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgttttttaaaaagttaaca 1657956  T
Q  192 t 192  Q
    |    
T  1657955 t 1657955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 10476275 - 10476107
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||| ||||||||||||||||  |||||||||||||||||| |||| ||||||||| | ||||||||||||||   |||||||||||||| | |||||      
T  10476275 tttagggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacgaccactatgaaatatttataaaaaaaa 10476176  T
Q  187 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgt 247  Q
     |||||||||| |||||||        |||| || ||||||||||||||||||||||||||||||||||    
T  10476175 aaacatattaagatgataaacgattatataatacttcaatcacacttaatttattttagaaaaacatgt 10476107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 247
Target Start/End: Complemental strand, 26415136 - 26414972
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaac 190  Q
    ||||||||||||||||  ||||| |||||| || ||| ||||  ||||||||||||||||||| |||| || |||||||||| |||| ||||||||||||    
T  26415136 ggtgtgtttggatggagggtttatgagggggaaaggaggggagagtttacttttcatttttaagttacagacactatgaaatgttttataaaaagttaac 26415037  T
Q  191 atattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgt 247  Q
    |||||||||||||||        |||| || ||||||||||||||| ||||||||||||||||||    
T  26415036 atattaacatgataaacgaccatataatacttcaatcacacttaatatattttagaaaaacatgt 26414972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 14245090 - 14245204
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||| ||  |||||||||||||||||| ||||   |||||||||| ||||||||||||||| ||| |||||| ||||||| ||||||||||    
T  14245090 ggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgttttttagaaagttaaca 14245189  T
Q  192 tattaacatgataaa 206  Q
    |||||||||||||||    
T  14245190 tattaacatgataaa 14245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 16938721 - 16938555
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||  |||||  ||||||||||||||||| || |||||||||| ||||||||| ||||||||    
T  16938721 ggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgttttttaaagagttaaca 16938622  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    | ||||||||||||        |||| |  ||||||||||||||||||||||||| |||||||||||    
T  16938621 tgttaacatgataaatgatcatataatatttcaatcacacttaatttattttagagaaacatgttat 16938555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 250
Target Start/End: Original strand, 9798615 - 9798780
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    |||||||||||||||   |||||||||  |||||||| ||  |||||||||||||||||||||||||||||||| ||||| ||||||||||||| || ||    
T  9798615 gtgtgtttggatggaggatttaggaggaaaagggatgtgagagtttacttttcatttttaaattacggatactacgaaatgttttttaaaaagtcaatat 9798714  T
Q  193 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
     ||||||||| ||        |||| || ||||||||| ||||||||||| |||||||||||||||    
T  9798715 tttaacatgaaaaacgatcatataatacttcaatcacaattaatttatttaagaaaaacatgttat 9798780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 10072692 - 10072815
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    ||||||||||||| ||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||        |||| || ||||||| |||||    
T  10072692 gtttacttttcatatttaaattgtgagtactatgaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcatactta 10072791  T
Q  227 atttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||||    
T  10072792 atttattttagaaaaacatgttat 10072815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 28279478 - 28279645
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||| ||| ||||| ||  | |||  |||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||    
T  28279478 ggtgtgtttggatggagggtttgggatgggaaagggggtgaaaatttacttttcatttttaaattatggacattatgaaatgttttttaaaaagttaaca 28279577  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttag-aaaaacatgttat 250  Q
    ||||||||||||||        |||| || ||||||||||||| |||||||||| |||||||||||||    
T  28279578 tattaacatgataaatgatcatataatacttcaatcacacttagtttattttagaaaaaacatgttat 28279645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 37607136 - 37607022
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||| ||||| ||||||   ||  |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  37607136 ggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaaatacagatactatgaaatgttttataaaaagttaaca 37607037  T
Q  192 tattaacatgataaa 206  Q
    |||||||||||||||    
T  37607036 tattaacatgataaa 37607022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 37779345 - 37779231
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||| ||||| ||||||   ||  |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  37779345 ggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaactacagatactatgaaatgttttataaaaagttaaca 37779246  T
Q  192 tattaacatgataaa 206  Q
    |||||||||||||||    
T  37779245 tattaacatgataaa 37779231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 9857072 - 9856956
Alignment:
Q  142 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttatt 233  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||| ||||        |||| || |||||||||||| |||||||    
T  9857072 tttcatttttaagttacggacactatgaaatgttttttaaaaagttaacatattaacataataaacgatcatataatacttcaatcacacttgatttatt 9856973  T
Q  234 ttagaaaaacatgttat 250  Q
    |||||||||||||||||    
T  9856972 ttagaaaaacatgttat 9856956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 36392195 - 36392309
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    |||||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||||||||||||        |||| || |||||||||||||    
T  36392195 gtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacactta 36392294  T
Q  227 atttattttagaaaa 241  Q
    || ||||||||||||    
T  36392295 atctattttagaaaa 36392309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 4373611 - 4373683
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat 207  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  4373611 gtttacttttaatttttaaattacggacactgtgaaatatttttttaaaagttaacatattaacatgataaat 4373683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 20146917 - 20146981
Alignment:
Q  141 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa 205  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  20146917 ttttcatttttaaattacggtcactatgaaatgttttttaaaaagttaacatattaacatgataa 20146981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 37551647 - 37551535
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||| ||||| ||||||  |||  |||||||||||||||||||| ||| || |||  ||||| |||| |||||||||||||    
T  37551647 ggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacact--gaaatgttttataaaaagttaaca 37551550  T
Q  192 tattaacatgataaa 206  Q
    |||||||||||||||    
T  37551549 tattaacatgataaa 37551535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 37654477 - 37654365
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||| ||||| ||||||  |||  |||||||||||||||||||| ||| || |||  ||||| |||| |||||||||||||    
T  37654477 ggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacact--gaaatgttttataaaaagttaaca 37654380  T
Q  192 tattaacatgataaa 206  Q
    |||||||||||||||    
T  37654379 tattaacatgataaa 37654365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 20513491 - 20513561
Alignment:
Q  136 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||||||||||||| ||| || |||||||||| ||||||||||||||||||||||| |||||||||    
T  20513491 tttacttttcatttttaaactacagacactatgaaatgttttttaaaaagttaacatattatcatgataaa 20513561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 43607 - 43535
Alignment:
Q  135 gtttacttttcatttttaaa-ttacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||| |||||    
T  43607 gtttacttttcatttttaaaattacgaacactatgaaatattttttgaaaagttaacatattaacataataaa 43535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 16501836 - 16501907
Alignment:
Q  136 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat 207  Q
    |||| ||||||||||||||||||||| | |||||||| |||||| |||||||||||||||||||| ||||||    
T  16501836 tttagttttcatttttaaattacggacattatgaaatgtttttttaaaagttaacatattaacataataaat 16501907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 17024270 - 17024392
Alignment:
Q  136 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 227  Q
    ||||||||||||||||||||| | || | |||||||| || |||||||||||| ||||||||||||| ||        |||| || ||||||  ||||||    
T  17024270 tttacttttcatttttaaattgcagacattatgaaatgttctttaaaaagttatcatattaacatgaaaaacgatcatataatacttcaatcgtacttaa 17024369  T
Q  228 tttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||||||    
T  17024370 tttattttagaaaaacatgttat 17024392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 22023568 - 22023495
Alignment:
Q  135 gtttacttttcatttttaaattacggatact-atgaaatattttttaaaaa-gttaacatattaacatgataaa 206  Q
    ||||||||||||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||    
T  22023568 gtttacttttcatttataaattacggatatttatgaaatgttttttaaaaaagttaacatattaacatgataaa 22023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 32727822 - 32727893
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    |||||| ||| ||||||||||||||| || ||||||||||||||||||||   |||||||||||||||||||    
T  32727822 gtttacattttatttttaaattacgggtattatgaaatattttttaaaaaacgaacatattaacatgataaa 32727893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 14245288 - 14245202
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 178  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||||||||||||||||||| ||| |||||| |||||    
T  14245288 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaatgttttt 14245202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 167
Target Start/End: Complemental strand, 11757144 - 11757070
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactat 167  Q
    |||||||||||||||  ||||| |||||||||||| ||||  |||||  |||||||||||||||||||| |||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggacactat 11757070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 13634713 - 13634782
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| ||||||||| |||||    
T  13634713 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacgga 13634782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 17780279 - 17780340
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatatt 195  Q
    |||||||||||| |||||||||||||||| ||| ||||  ||||||||||||||||||||||    
T  17780279 gtttacttttcagttttaaattacggatattataaaatgtttttttaaaaagttaacatatt 17780340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 26414895 - 26414964
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  |||||||||| ||||||| ||||  ||||||||||| |||||||||||||||    
T  26414895 ggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacgga 26414964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 4423404 - 4423336
Alignment:
Q  141 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 209  Q
    ||||||||||||||||||| | | ||||||||||||||| |||| ||| ||||||||| | ||||||||    
T  4423404 ttttcatttttaaattacgaacattatgaaatatttttttaaaatttagcatattaacgtaataaataa 4423336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 10650427 - 10650517
Alignment:
Q  90 atggtgtgtttggatggaaagtttaggaggggaa--gggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 178  Q
    |||||| |||||||||||   |||||||||||||  |||| ||||   ||||||||| |||||||||||||||| |||||||||| |||||    
T  10650427 atggtgcgtttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgttttt 10650517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 34980812 - 34980879
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 159  Q
    ||||||||||||| ||| |||||||||||||||||| || |  ||| |||||| ||||||||||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacg 34980879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 11419237 - 11419302
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat 200  Q
    |||||||||||||||| |||||| ||| | ||| |||| ||||| ||||||| |||||||||||||    
T  11419237 gtttacttttcattttcaaattaaggacaatataaaatgtttttaaaaaagtaaacatattaacat 11419302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 2556215 - 2556167
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaa 183  Q
    ||||||||||||||||||||||| ||||  ||| |||||||||||||||    
T  2556215 gtttacttttcatttttaaattatggatgatataaaatattttttaaaa 2556167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 22022962 - 22022926
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||||||||| |||||||    
T  22022962 tcaatcacacttaatttattttagaaaaatatgttat 22022926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 2550397 - 2550520
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactt 225  Q
    |||||||||||||||||||||||| || ||||||| ||  ||||||||| | |||| ||| | |||||||||        |||| || |||||||||| |    
T  2550397 gtttacttttcatttttaaattacagacactatgatatgtttttttaaacaattaaaataat-acatgataaacaatcatataatacttcaatcacacgt 2550495  T
Q  226 aatttattttagaaaaacatgttat 250  Q
    |||||||| ||||||||||||||||    
T  2550496 aatttattatagaaaaacatgttat 2550520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  94 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaa 153  Q
    ||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 29002251 - 29002322
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||||||||||||||||| | | ||||| |||| ||||||  |||   |||||||||||||||||||    
T  29002251 gtttacttttcatttttaaattatgaacactataaaatgttttttttaaaaacaacatattaacatgataaa 29002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 10476028 - 10476090
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 154  Q
    |||||||||| || ||  |||||||||||||||||||| ||  ||||||||||| ||||||||    
T  10476028 ggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 11756987 - 11756953
Alignment:
Q  216 aatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||| |||||||||||    
T  11756987 aatcacacttaatttattttagagaaacatgttat 11756953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 33744190 - 33744260
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 157  Q
    |||| ||||||||||||||||  ||| ||| || ||||||| ||||  ||||||||||| |||||||||||    
T  33744190 tttagggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaatta 33744260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 40815299 - 40815365
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 158  Q
    ||||||||||||| |||  ||||||||||||||||| | ||   |||||||||| ||||||||||||    
T  40815299 ggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattac 40815365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 16938481 - 16938550
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||| ||||||| |||||||    
T  16938481 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacgga 16938550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 14681581 - 14681545
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  14681581 tcaatcacatttaatttattttaaaaaaacatgttat 14681545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 250
Target Start/End: Original strand, 24970187 - 24970333
Alignment:
Q  111 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa----- 205  Q
    ||||||||||||||| | ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||         
T  24970187 tttaggaggggaagg-aggggatgatttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacttgataaacgat 24970285  T
Q  206 ---ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
       |||| || |||||||||||||||||||||||||||||||||||||    
T  24970286 catataatacttcaatcacacttaatttattttagaaaaacatgttat 24970333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 33655153 - 33655276
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||        |||| || |||||||||||||    
T  33655153 gtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacactta 33655252  T
Q  227 atttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||||    
T  33655253 atttattttagaaaaacatgttat 33655276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 41496959 - 41497125
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||||||||||||||| ||||   ||||||||| |||||||||||||||| | || ||||| ||||||||||| ||||||    
T  41496959 ggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatgttttttaaaaatttaaca 41497058  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||        ||||  | |||||||||||||||||||||||||||||||||||||    
T  41497059 tattaacatgataaatgatcatataattcttcaatcacacttaatttattttagaaaaacatgttat 41497125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 18231828 - 18231714
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||||||||||||||| ||||   |||||||||||||||||||||||  | |||||||||| ||||||||||||||||||    
T  18231828 ggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaacactatgaaatgttttttaaaaagttaaca 18231729  T
Q  192 tattaacatgataaa 206  Q
    |||||||||||||||    
T  18231728 tattaacatgataaa 18231714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 40196534 - 40196700
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||| |||||||||||||  |||  ||||||||||||||||| ||||||||| ||||| |||| |||| |||||||||||||    
T  40196534 ggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgttttataaaaagttaaca 40196633  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||| ||| ||||||        |||| || |||||||||||||||||||||||||||||||||||||    
T  40196634 tatcaacctgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatgttat 40196700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 47391098 - 47390931
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  ||||| |||||||||||| ||||  ||||  ||||||||||||||||||||| ||||| ||| ||||||||||| |||||||    
T  47391098 ggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggacactataaaacattttttaaaatgttaaca 47390999  T
Q  192 tattaacatgataa---------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||         |||| || ||||||||| ||||| |||||||||||||||||||||    
T  47390998 tattaacatgataaacaagtcatataatacttcaatcacaattaatgtattttagaaaaacatgttat 47390931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 96 - 206
Target Start/End: Original strand, 4833537 - 4833647
Alignment:
Q  96 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 195  Q
    ||||||||||||  |||||||||||||||||| ||||  |||||||||||||||||||||||| || |||||||||| |||| |||||||||||| ||||    
T  4833537 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacctatt 4833636  T
Q  196 aacatgataaa 206  Q
    |||||||||||    
T  4833637 aacatgataaa 4833647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 250
Target Start/End: Complemental strand, 42306571 - 42306410
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    |||||||||||| ||  ||||||||||||||  || ||||  ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgttttttaaaaagttagcat 42306472  T
Q  193 attaacatgataa----ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||| | ||||    |||| ||  ||||||| |||||||||||||||||| |||||||||    
T  42306471 attaacctcataaacatataatactccaatcacgcttaatttattttagaaatacatgttat 42306410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 34235053 - 34235176
Alignment:
Q  136 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 227  Q
    |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||| |||||||        |||| || ||||||||||||||    
T  34235053 tttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaatatgataaacaatcatataatacttcaatcacacttaa 34235152  T
Q  228 tttattttag-aaaaacatgttat 250  Q
    |||||||||| |||||||||||||    
T  34235153 tttattttagaaaaaacatgttat 34235176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 45940658 - 45940824
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||| |||||| ||||||||||| || || |||||||||| ||||||| |||||||| |||||||||| ||||||| |||| ||  |    
T  45940658 ggtgtgtttggatggaaggtttagaaggggaagggagggcaaagtttactttttatttttatattacggacactatgaaatgttttttacaaagatagta 45940757  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||| ||||        |||| || ||||| ||| ||||||||||||||||||| |||||||    
T  45940758 tattaacataataagcgataatataatacttcaattacatttaatttattttagaaaaatatgttat 45940824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 206
Target Start/End: Complemental strand, 10315872 - 10315761
Alignment:
Q  95 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 194  Q
    |||||||||||||| ||||||||||||||||||  ||    |||| |||||||||||||| |||||| |||||||||| ||||||||||| |||||||||    
T  10315872 gtgtttggatggaaggtttaggaggggaagggagagggtgatttatttttcatttttaaaatacggacactatgaaatgttttttaaaaatttaacatat 10315773  T
Q  195 taacatgataaa 206  Q
    ||||| ||||||    
T  10315772 taacaagataaa 10315761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 13770945 - 13771114
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||| ||||||||||||| ||   ||||||||||||||||| ||||   ||||||| | |||||||||||||||| ||||| |||||  || ||||||||    
T  13770945 tttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaata--ttataaaaagt 13771042  T
Q  187 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||        |||||||   ||||||||||||||||||||| |||||||||||||    
T  13771043 taacatattaacatgataaacaatgatataacactcgaatcacacttaatttattttaaaaaaacatgttat 13771114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 110 - 250
Target Start/End: Complemental strand, 25887417 - 25887268
Alignment:
Q  110 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatattaacatgataa--- 205  Q
    |||||||||||||||||| ||||  |||||| |||||||||||||||||| | |  |||||||  |||||| ||||||||||||||||| |||||||       
T  25887417 gtttaggaggggaagggaggggagagtttacatttcatttttaaattacgaaaatcatgaaatgttttttttaaaagttaacatattaatatgataaaca 25887318  T
Q  206 -----ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
         |||| ||  ||||||||||||||||||||||||||||||||||||    
T  25887317 atcatataatactccaatcacacttaatttattttagaaaaacatgttat 25887268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 250
Target Start/End: Complemental strand, 43230476 - 43230312
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    ||||||||||||| |  ||||| ||| |||| | | ||||  |||||||||| |||||||||||||||| ||| |||| | |||||| ||||||||||||    
T  43230476 gtgtgtttggatgtagggtttatgagaggaaagaaggggagagtttactttttatttttaaattacggacact-tgaattttttttttaaaagttaacat 43230378  T
Q  193 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||        ||||  | |||||| ||||||||||||||||||||||||||||||    
T  43230377 attaacatgataaacgatcgtataattcttcaatcgcacttaatttattttagaaaaacatgttat 43230312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 110 - 250
Target Start/End: Original strand, 1051520 - 1051666
Alignment:
Q  110 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa---- 205  Q
    ||||||||||||||  || ||||  ||| || |||||||||||||||||||| || ||||||| |||||||||||||||||||||| |||||||||        
T  1051520 gtttaggaggggaatagaggggagggttaacatttcatttttaaattacggacac-atgaaatgttttttaaaaagttaacatatt-acatgataaacaa 1051617  T
Q  206 ----ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
        ||||  | ||||||||||||||||||||||||||||||| |||||    
T  1051618 tcatataatgcttcaatcacacttaatttattttagaaaaacaggttat 1051666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 32872826 - 32872897
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||||| ||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  32872826 gtttacttttcttttttaaattacgaatattataaaatactttttaaaaagttaacatattaacatgataaa 32872897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 13425122 - 13425236
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||| ||  |||||||||||||||| |  |||  ||||| |||| ||||||||||||| || ||||  ||||||||||| |||||| ||||    
T  13425122 ggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattacagacactacaaaatattttttcaaaagtcaaca 13425221  T
Q  192 tattaacatgataaa 206  Q
    |||||||||||||||    
T  13425222 tattaacatgataaa 13425236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 251
Target Start/End: Complemental strand, 17853067 - 17852946
Alignment:
Q  137 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaat 228  Q
    |||||||||||||||||||||||   ||||||||| | ||||||||||| ||| |||  |||||||||||        ||| ||||||||||||||||||    
T  17853067 ttacttttcatttttaaattacgagcactatgaaa-agtttttaaaaagataaaataacaacatgataaacgatcatataatacctcaatcacacttaat 17852969  T
Q  229 ttattttagaaaaacatgttatt 251  Q
    |||||||||||||||||||||||    
T  17852968 ttattttagaaaaacatgttatt 17852946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 245
Target Start/End: Original strand, 22163167 - 22163272
Alignment:
Q  147 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 238  Q
    ||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||        |||| || |||||||||||||||||||||||||    
T  22163167 tttttaaattacggacactatgaaatgttttttagaaag-taacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttaga 22163265  T
Q  239 aaaacat 245  Q
    |||||||    
T  22163266 aaaacat 22163272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 245
Target Start/End: Original strand, 22221875 - 22221980
Alignment:
Q  147 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 238  Q
    ||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||        |||| || |||||||||||||||||||||||||    
T  22221875 tttttaaattacggacactatgaaatgttttttagaaag-taacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttaga 22221973  T
Q  239 aaaacat 245  Q
    |||||||    
T  22221974 aaaacat 22221980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 40572287 - 40572350
Alignment:
Q  142 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  40572287 tttcatttttaaattacggatgctataaaatatttttt-aaaagttaacatattaacatgataaa 40572350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 34228364 - 34228486
Alignment:
Q  136 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 227  Q
    |||||||| ||||||  ||||||||| ||||||||   ||| | |||||||||||||||||| |||||||        |||| || ||||||||||||||    
T  34228364 tttactttacattttgtaattacggacactatgaatgttttataaaaaagttaacatattaatatgataagcaatcatataatacttcaatcacacttaa 34228463  T
Q  228 tttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||||||    
T  34228464 tttattttagaaaaacatgttat 34228486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 41008425 - 41008258
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatt--ttttaaaaa 184  Q
    |||| |||||||||||||| |  |||||||||||||||| |   ||  |||||| ||||||||||||||||||||||||||||  | ||  | || ||||    
T  41008425 tttagggtgtgtttggatgcagggtttaggaggggaaggaa---ga--gtttacatttcatttttaaattacggatactatgatttttttgtcttcaaaa 41008331  T
Q  185 gttaacatattaacatgataa------ataacacctcaatcacacttaatttatttt-agaaaaacatgttat 250  Q
    |||||||||||||||||||||      |||  || |||||||||||||||||||||| | |||||||||||||    
T  41008330 gttaacatattaacatgataaacaatcatataacttcaatcacacttaatttattttaaaaaaaacatgttat 41008258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 48881560 - 48881646
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 178  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| ||||||||||||||| | ||| ||||| ||||    
T  48881560 ggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaataatttt 48881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 39856107 - 39856038
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  39856107 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 39856038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 36267555 - 36267635
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat 172  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||| ||||| ||||||||||||||||| ||| ||||    
T  36267555 ggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacggatattataaaat 36267635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 31571712 - 31571643
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  31571712 ggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacgga 31571643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 19835906 - 19835838
Alignment:
Q  137 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa 205  Q
    ||||||||||||||||||||||||| ||||| |||| || |||||||| |||| ||| |||||| ||||    
T  19835906 ttacttttcatttttaaattacggaaactataaaatgttctttaaaaaattaaaataataacatcataa 19835838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 31553182 - 31553287
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||| ||||||||||||||||  |||||||||||||||||| | ||  ||  |||||| ||||| |||| ||||| | |||||||| |||||||||||||    
T  31553182 tttagggtgtgtttggatggag-gtttaggaggggaagggaggagagggtc-acttttaatttt-aaataacggacattatgaaatgttttttaaaaagt 31553278  T
Q  187 taacatatt 195  Q
    |||||||||    
T  31553279 taacatatt 31553287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 47229888 - 47229948
Alignment:
Q  146 atttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||| ||||| || |||||||||||| ||||||||  |||||||||||||||||||    
T  47229888 atttttaaactacgggtattatgaaatatttcttaaaaagcgaacatattaacatgataaa 47229948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 33519290 - 33519224
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 158  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| | ||||||||||    
T  33519290 ggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattac 33519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 250
Target Start/End: Original strand, 37417706 - 37417801
Alignment:
Q  163 actatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||| |||| ||||||||||||||||| |||||||||        |||| || |||||||||||||| ||| ||| ||||||||||||||    
T  37417706 actatgaaatgttttctaaaaagttaacatattcacatgataaacgatcatataatacttcaatcacacttaacttaattttgaaaaacatgttat 37417801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 13771188 - 13771119
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||| ||| ||  |||||||||||||||||| | ||  ||||||||||| |||||||||||||||    
T  13771188 ggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacgga 13771119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 28074105 - 28074174
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||| |||||||||||||||||| ||||    | ||||||| |||||||||||||||    
T  28074105 ggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacgga 28074174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 30592255 - 30592372
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||| ||||||||||   |||||||||| |||||| ||||  | ||||||||| |||||||||||| || ||||| ||||  |||||||||| || | |    
T  30592255 ggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaaattgaaa 30592354  T
Q  192 tattaacatgataaataa 209  Q
    || | | |||||||||||    
T  30592355 taatcatatgataaataa 30592372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 34228561 - 34228492
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||||||||| || ||| |||||||||| ||||||| ||||   ||||||||||||||| ||||||||||    
T  34228561 ggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacgga 34228492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 250
Target Start/End: Complemental strand, 26366009 - 26365844
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 192  Q
    ||||||||||| |||  ||||| || |||||| || ||||  ||||  ||||| ||||||||||| ||||||||  |||||||||||  ||| |||| ||    
T  26366009 gtgtgtttggacggagggtttaagatgggaagagaggggatagtttgattttcgtttttaaattatggatactacaaaatattttttttaaaattaaaat 26365910  T
Q  193 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    | |||||||| ||        |||| || |||||||||| || ||||||||||||||| |||||||    
T  26365909 aataacatgagaaacaatcatataatacttcaatcacacctagtttattttagaaaaatatgttat 26365844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 39856001 - 39856033
Alignment:
Q  218 tcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||||||||||||||||    
T  39856001 tcacacttaatttattttagaaaaacatgttat 39856033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 48152092 - 48152056
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||| |||||||||||||||||||||||||    
T  48152092 tcaatcacactaaatttattttagaaaaacatgttat 48152056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 2087786 - 2087833
Alignment:
Q  137 ttacttttcatttttaaattacggatactatgaaatattttttaaaaa 184  Q
    ||||||||| ||||||||||||||||| ||| ||||| ||||||||||    
T  2087786 ttacttttcttttttaaattacggatattataaaataatttttaaaaa 2087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 174
Target Start/End: Original strand, 30891039 - 30891078
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatat 174  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  30891039 gtttacttttcatttttaaattacggacactataaaatat 30891078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 37925843 - 37925910
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 159  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||  |||||||||||||    
T  37925843 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacg 37925910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 47390852 - 47390922
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 157  Q
    |||| ||||||||||||| ||  | ||||||||||||||||  |||  ||||||||||| |||||||||||    
T  47390852 tttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaatta 47390922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 42087188 - 42087131
Alignment:
Q  141 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaac 198  Q
    |||||||||||||||||||| || |||  ||  ||||||||||||||| |||||||||    
T  42087188 ttttcatttttaaattacgggtattatacaaagttttttaaaaagttagcatattaac 42087131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 33655349 - 33655285
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 157  Q
    |||||||||||| ||  ||||||||||||||| || | ||  ||||||||||| |||||||||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaatta 33655285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 162
Target Start/End: Complemental strand, 34235208 - 34235180
Alignment:
Q  134 tgtttacttttcatttttaaattacggat 162  Q
    |||||||||||||||||||||||||||||    
T  34235208 tgtttacttttcatttttaaattacggat 34235180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 8e-39; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 45742132 - 45741966
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    |||||||||||||| |  ||||||| ||| |||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  45742132 ggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaaca 45742033  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||        |||| || ||||||||| ||||||||||||||||||||| |||||    
T  45742032 tattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacaagttat 45741966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 54935311 - 54935144
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||||||| | ||||||||||||| ||    
T  54935311 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaatgtattttaaaaagttatca 54935212  T
Q  192 tattaacatgataaa---------taacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||| ||||||||          || || |||||||||||||||||||||||||||||||||||||    
T  54935211 tattaatatgataaacgatcatataaatacttcaatcacacttaatttattttagaaaaacatgttat 54935144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 31348340 - 31348489
Alignment:
Q  109 agtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--- 205  Q
    |||||| |||||||||||| || |  ||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||       
T  31348340 agtttatgaggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaaca 31348439  T
Q  206 -----ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
         |||| |  |||||||||| ||||||||||||||||||||||||||    
T  31348440 atcatataataattcaatcacacataatttattttagaaaaacatgttat 31348489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 5730827 - 5730998
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 186  Q
    |||| ||||||||||||||||  ||||||||||| ||| |||||||  |||||  ||||||||||||||||||||  |||| ||||||||||| || |||    
T  5730827 tttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagt 5730926  T
Q  187 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||        |||| || ||||| ||||||||||||||||||| |||||||||||    
T  5730927 taacatattaacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacatgttat 5730998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 250
Target Start/End: Complemental strand, 27735987 - 27735821
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||||||||||||||| |  |  ||| | ||||||||||||||||||||| ||||| |||| ||||||||| ||||| ||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgttttttaaagagttagca 27735888  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||        |||| || ||||||||||||||||||||||| |||||||||||||    
T  27735887 tattaacatgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttat 27735821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 246
Target Start/End: Complemental strand, 54320676 - 54320514
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  |||| |||||||||||||||| |||||||||  ||||||||||||||| ||    
T  54320676 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggacactatgaaacgttttttaaaaagttagca 54320577  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatg 246  Q
    ||||||||||||||        |||| ||  ||||||||||||||||||||||||||||||||    
T  54320576 tattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaaacatg 54320514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 246
Target Start/End: Complemental strand, 41174587 - 41174425
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||| ||| ||| ||||||||||  |||||||||||||| ||    
T  41174587 ggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggacactatgaaatggtttttaaaaagttagca 41174488  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatg 246  Q
    ||||||||| ||||        |||| || ||||||||| || ||||||||||||||||||||    
T  41174487 tattaacataataaatgatcatataatacatcaatcacatttgatttattttagaaaaacatg 41174425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 49735470 - 49735636
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||||||||||||||||||| |  ||||||| | |||||||||||||||     
T  49735470 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaatgtcttttaaaaagttaacc 49735569  T
Q  192 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||        |||| |  || ||||||||| ||||||||||||||||||||||||    
T  49735570 tattaacatgataaacgataatataatatttctatcacacttgatttattttagaaaaacatgttat 49735636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 250
Target Start/End: Complemental strand, 35248922 - 35248762
Alignment:
Q  98 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 197  Q
    ||||||||||  ||||||||| || ||||| ||||  |||||||||||| |||||||||| ||| |||    |||||||||| |||||||||| ||||||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggacactcaagaatatttttttaaaagttaacgtattaa 35248823  T
Q  198 catgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||        |||| || |||||||||||||||||||||||||||||||||||||    
T  35248822 catgataaataatcatataatacttcaatcacacttaatttattttagaaaaacatgttat 35248762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 24565348 - 24565462
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 191  Q
    ||||||||||||||||| |||||||| ||||||    ||||  ||||||||||||||||||||||||||||| || |||||  ||||||||||||||||     
T  24565348 ggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacggatattacgaaatgctttttaaaaagttaact 24565447  T
Q  192 tattaacatgataaa 206  Q
    ||||||| |||||||    
T  24565448 tattaacgtgataaa 24565462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 6938489 - 6938394
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtt 187  Q
    ||||||||||||||||| ||||| |||||||| ||| ||||  ||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  6938489 ggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacggatattataaaatgttttttaaaaagtt 6938394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 16400987 - 16400878
Alignment:
Q  147 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 238  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||        |||| || ||||||| | |||||||||||||||    
T  16400987 tttttaaattagggacactatgaaatagtttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcataattaatttattttaga 16400888  T
Q  239 aaaacatgtt 248  Q
    ||||||||||    
T  16400887 aaaacatgtt 16400878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 34111003 - 34110933
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    |||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||    
T  34111003 gtttactttttatttttaaattacg-atactgtgaaatgttttttaaaaagttaacatattaacatgataaa 34110933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 250
Target Start/End: Complemental strand, 6891590 - 6891436
Alignment:
Q  104 tggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgat 203  Q
    |||| |||||||||||||||| || ||||  ||||  ||||| ||||||||||| ||| |||||||| | ||||| ||||| |||| ||| |||||| ||    
T  6891590 tggatagtttaggaggggaagagaggggagagtttgattttcgtttttaaattatggacactatgaattgtttttaaaaaaattaaaataataacattat 6891491  T
Q  204 aaa--------taacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||        ||| || |||||||||||||||||||||||||||||||||||||    
T  6891490 aaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttat 6891436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 36151773 - 36151652
Alignment:
Q  136 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaa 227  Q
    |||||||||||||||||||||| | | ||||  ||||  ||||||||| ||||||||||||||||||||||        ||| || ||||||||||||||    
T  36151773 tttacttttcatttttaaattatgaacactagaaaatgatttttaaaa-gttaacatattaacatgataaacgatcatataatacttcaatcacacttaa 36151675  T
Q  228 tttattttagaaaaacatgttat 250  Q
    |||||||||||||||||||||||    
T  36151674 tttattttagaaaaacatgttat 36151652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 37711371 - 37711282
Alignment:
Q  86 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatt 175  Q
    ||||| ||||||||||||||||  |||||||||||||||||| ||||  |||||  |||||||||||||||||||| ||||| |||||||    
T  37711371 ttttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaatatt 37711282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 26167118 - 26167013
Alignment:
Q  153 aattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaaca 244  Q
    ||||||||| ||| |||||| |||||| || ||||||||||||||||||||||        |||| || ||||||||||||||||||||||||| |||||    
T  26167118 aattacggacactttgaaatgtttttttaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagagaaaca 26167019  T
Q  245 tgttat 250  Q
    ||||||    
T  26167018 tgttat 26167013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 31348563 - 31348494
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||||||||||| ||||||||| |||||    
T  31348563 ggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacgga 31348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 46007744 - 46007869
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaa--tattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacact 224  Q
    |||||||||||||||||||||||| || |  ||||||    ||||||||||||||||||||||||||||||||        |||| || |||||| ||||    
T  46007744 gtttacttttcatttttaaattaccgacataatgaaaatgtttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatctcact 46007843  T
Q  225 taatttattttagaaaaacatgttat 250  Q
    |||||||||||| ||||||| |||||    
T  46007844 taatttattttacaaaaacaagttat 46007869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 206
Target Start/End: Original strand, 17938115 - 17938223
Alignment:
Q  98 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 197  Q
    ||||||||||  |||||||||||||| ||| || |  ||||| ||||| ||||||||||| ||| | |||| ||| ||||||||||| |||| ||| |||    
T  17938115 tttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggacattatggaatgttttttaaaaatttaaaataataa 17938214  T
Q  198 catgataaa 206  Q
    |||||||||    
T  17938215 catgataaa 17938223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 29798478 - 29798422
Alignment:
Q  141 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 197  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||    
T  29798478 ttttcatttttaaattacggacactatgaaatgttttttaaaaaattaacatgttaa 29798422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 250
Target Start/End: Complemental strand, 22659413 - 22659274
Alignment:
Q  111 tttaggaggggaagggatgggaatgtttacttttcattttt-aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 209  Q
    |||||||||  |||||| | || |||||||||||||||||| ||||||| || || || ||||||||||| |||| |||| |||||||||| ||||| ||    
T  22659413 tttaggaggaaaagggaggagagtgtttacttttcattttttaaattacagacaccataaaatatttttttaaaaattaatatattaacataataaacaa 22659314  T
Q  210 -cacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
     ||  | |||  |||||||||| |||||| ||||||||||||    
T  22659313 tcatattaat--cacttaatttcttttaggaaaacatgttat 22659274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 36278450 - 36278376
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 209  Q
    ||||| ||||| |||||||||||| || |||| ||||||||||||| ||| ||||| |||||| |||||||||||    
T  36278450 gtttagttttcgtttttaaattacagacactacgaaatattttttataaatttaacgtattaatatgataaataa 36278376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 44784190 - 44784068
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 226  Q
    ||||||||||| ||||||||||||| | |||| |||||||||| | ||| |||||||||||||| | ||||        |||| || |||||||||||||    
T  44784190 gtttacttttcgtttttaaattacgaacactacgaaatattttct-aaacgttaacatattaaccttataaacgatcatataatacttcaatcacactta 44784092  T
Q  227 atttattttagaaaaacatgttat 250  Q
    ||||| ||||||||||| ||||||    
T  44784091 atttactttagaaaaacctgttat 44784068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 1968601 - 1968532
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  |||||||||||||||||| || |  ||||| |||||||||||||||||||||    
T  1968601 ggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacgga 1968532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 47433754 - 47433877
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat------gataa-ataacacctcaatcacacttaa 227  Q
    ||||| ||||| ||||||||||| ||| | |||| ||| ||||||||||| |||| ||| ||||||      ||| | |||| || ||||||||||||||    
T  47433754 gtttaattttcgtttttaaattatggacattatggaatgttttttaaaaaattaaaataataacatataaacgatcatataatacttcaatcacacttaa 47433853  T
Q  228 tttattttagaaaaacatgttatt 251  Q
    ||||||||| ||||||||||||||    
T  47433854 tttattttaaaaaaacatgttatt 47433877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 21694910 - 21694981
Alignment:
Q  110 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaa 181  Q
    |||||||||||||||||| ||||  | ||||||||| ||||||||||||||| ||||| ||||  |||||||    
T  21694910 gtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatggtttttaa 21694981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 27735749 - 27735816
Alignment:
Q  94 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||| ||  |||||||||||||||||| | ||  ||||| |||||||||||||||||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacgga 27735816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 46007942 - 46007879
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatt 156  Q
    |||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| ||||||||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 2248050 - 2247972
Alignment:
Q  85 gttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggata 163  Q
    |||| ||||||||||||||| ||  |||||||||| |||| || ||||  ||||||||||| |||||||||||| ||||    
T  2248050 gtttaatggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacagata 2247972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 45132737 - 45132668
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||||||||| || || |||||||||||||||| || | ||  ||||||||||| |||||||||||||||    
T  45132737 ggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacgga 45132668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 45911327 - 45911368
Alignment:
Q  137 ttacttttcatttttaaattacggatactatgaaatattttt 178  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  45911327 ttacttttcttttttaaattacggatactataaaatattttt 45911368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 54576329 - 54576398
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||||||  |||||| ||||||||||| ||||  | ||||||||| |||||| ||||||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacgga 54576398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 37711255 - 37711219
Alignment:
Q  214 tcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||||||||||||||||| |||||||||||    
T  37711255 tcaatcacacttaatttattttagagaaacatgttat 37711219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 54935069 - 54935137
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaaggga-tgggaatgtttacttttcatttttaaattacg 159  Q
    ||||||||||||| ||  ||||||||||||||||||  ||||  ||||||||||| |||||||||||||    
T  54935069 ggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacg 54935137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 45132517 - 45132655
Alignment:
Q  110 gtttaggaggggaagggatgggaatgtttacttttcat-----ttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgata 204  Q
    ||||||||| ||||| || ||||  |||||||||||||     |||||||||| | | |||| ||||| |||| ||||||||||||||||||| ||||||    
T  45132517 gtttaggagcggaagagaggggatggtttacttttcataatctttttaaattatgtacactacgaaatgtttt-taaaaagttaacatattaaaatgata 45132615  T
Q  205 a--------ataacacctcaatcacacttaatttatttta 236  Q
    |        |||| || |||||||||||||||||||||||    
T  45132616 aacgatcatataatacttcaatcacacttaatttatttta 45132655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 47433951 - 47433885
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 158  Q
    ||||||||||| | ||  ||||||||||||||||||  |||  ||||||||||| ||||||||||||    
T  47433951 ggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattac 47433885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 47846303 - 47846233
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 157  Q
    |||| ||||||||||||| ||  ||||| |||| ||||||||||||  ||||||||||  |||||||||||    
T  47846303 tttaaggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaatta 47846233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 55510407 - 55510326
Alignment:
Q  95 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttt 177  Q
    ||||||||||||| |||||| ||||| |||  ||| ||  |||||||||| |||||||||||||| | ||||| |||||||||    
T  55510407 gtgtttggatggagagtttaagagggaaagaaatgtgagggtttactttt-atttttaaattacgaacactataaaatatttt 55510326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 2247854 - 2247919
Alignment:
Q  141 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||||||||||||||||||| | ||| |||| ||| ||||||  ||||| |||||| ||||||||    
T  2247854 ttttcatttttaaattacggacattataaaatgtttattaaaatcttaacttattaatatgataaa 2247919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 37761467 - 37761555
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttta 180  Q
    ||||||||||||| || ||||||||||| ||| ||| || |  ||| |||||| |||||||||||||| | |  || ||||||||||||    
T  37761467 ggtgtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaattacgaacaacataaaatatttttta 37761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 39182 - 39357
Alignment:
Q  86 ttttatggtgtgtttggatggaaagtttaggaggggaaggga-tgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 184  Q
    ||||| ||||||||||||||||  ||||||||||||||  ||  ||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  39182 ttttagggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaa 39281  T
Q  185 gttaacatattaacatgataaat-aaca----------cctcaatcacacttaatttattttagaaaaacatgtta 249  Q
    ||||||||||||||||||||||| | ||          | ||||||||||||||||||||||||||||||||||||    
T  39282 gttaacatattaacatgataaatgatcatataatacttcttcaatcacacttaatttattttagaaaaacatgtta 39357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 39432 - 39363
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    ||||||||||||| ||  |||||| |||| |||||| ||||  ||||||||||| |||||||||||||||    
T  39432 ggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacgga 39363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 96 - 250
Target Start/End: Original strand, 16302 - 16464
Alignment:
Q  96 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 195  Q
    ||||||||||||  ||||||||||| || ||| ||||  ||||||||||||||||||||||| | | |||||||||| |||| ||||| |||||||||||    
T  16302 tgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaatgttttataaaacgttaacatatt 16401  T
Q  196 aacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    ||||||||||        |||| || ||||||||||||||||||||||||| |||||||||||    
T  16402 aacatgataaacaatcatataatacttcaatcacacttaatttattttagacaaacatgttat 16464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 89 - 250
Target Start/End: Complemental strand, 15507 - 15339
Alignment:
Q  89 tatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtta 188  Q
    |||||||||||||||||||  |||||||| |||||||||   ||   | ||||||| |||||||||||||||| |||||| ||| |||||||||| || |    
T  15507 tatggtgtgtttggatggagggtttaggaagggaagggaaatgaggatctactttttatttttaaattacggacactatg-aatgttttttaaaaggtca 15409  T
Q  189 acatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttat 250  Q
    |||||||||| ||||||        |||| || |||| ||||||||||||||||||||||||||||||||    
T  15408 acatattaacgtgataaacaatcatataatacttcaaccacacttaatttattttagaaaaacatgttat 15339  T

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Target: scaffold0171 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 16173 - 16082
Alignment:
Q  111 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatga 202  Q
    ||||||||||||||||| |  |  ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  16173 tttaggaggggaagggaggaaagagtttatttttcatttttaaattacggatattatgaaatgttttttaaaaagttaacatattaatatga 16082  T

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Target: scaffold0198 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 178
Target Start/End: Original strand, 3150 - 3235
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 178  Q
    |||||||||||| || ||||||||||||||||||| ||||  ||||||||||| |||||||||||| || |||||||||| |||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgttttt 3235  T

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Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 1377 - 1300
Alignment:
Q  129 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 206  Q
    ||||| ||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||  |||||||||    
T  1377 gggaaggtttacttttcatttttaaattatgaacactatgaaatgttttttaaaaagttaacatattgtcatgataaa 1300  T

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Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 1175 - 1243
Alignment:
Q  93 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 161  Q
    |||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacgga 1243  T

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Target: scaffold0341 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 18968 - 18846
Alignment:
Q  135 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa-------ataacacctcaatcacacttaa 227  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| ||||||| |||||||||||||||       |||| |  ||||| |||| |||    
T  18968 gtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaacatgataaagatcatataataattcaatgacacataa 18869  T
Q  228 tttattttagaaaaacatgttat 250  Q
    ||||||||||||| |||||||||    
T  18868 tttattttagaaagacatgttat 18846  T

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Target: scaffold0096 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 6780 - 6660
Alignment:
Q  137 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat------gat-aaataacacctcaatcacacttaatt 229  Q
    ||||||||| ||||||||||||| | |||||||||||||||| ||||| |||| ||||||||||      ||| | |||| || ||||||||||| ||||    
T  6780 ttacttttcgtttttaaattacgcacactatgaaatatttttaaaaaaattaaaatattaacatataaacgatcatataatacttcaatcacactaaatt 6681  T
Q  230 tattttagaaaaacatgttat 250  Q
    |||||||||| |||| |||||    
T  6680 tattttagaataacaagttat 6660  T

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Target: scaffold0096; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 6581 - 6652
Alignment:
Q  87 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 158  Q
    |||| ||||||||||||| |||  ||||||||| ||||||| ||||  ||||||||||| ||||||||||||    
T  6581 tttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattac 6652  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 184
Target Start/End: Complemental strand, 242456 - 242366
Alignment:
Q  94 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 184  Q
    ||||||||||||||  |||||  ||||||||||| ||||  ||||||||||| ||||||||||||||| | ||| ||||  ||||||||||    
T  242456 tgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaaa 242366  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 17780 - 17716
Alignment:
Q  92 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 158  Q
    ||||||||||||||||  ||||||||| |||||||| |||   ||||||||||| ||||||||||||    
T  17780 ggtgtgtttggatggagggtttaggagtggaagggagggg--ggtttacttttcttttttaaattac 17716  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 184847 - 184784
Alignment:
Q  94 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 157  Q
    ||||||||||||||  ||||||||||| |||||| ||||  ||||||| ||| |||||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaatta 184784  T

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