View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3057_low_27 (Length: 213)
Name: NF3057_low_27
Description: NF3057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3057_low_27 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 25146165 - 25146333
Alignment:
| Q |
21 |
tgaactgggatcatccactacctcggaattcagcaaccaaacctggaacctttcttggagtcagctggctgaagcaacctaccaatcacctttggtgcct |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25146165 |
tgaactgggatcatccactacctcggaattcagcaaccaaacctggaacctttcttggagtcagctggctgaagcaacctaccaatcacctttggtgcct |
25146264 |
T |
|
| Q |
121 |
agtttcttattataggttttgtataattagaataactgtttgccctaatacgagagttgatgatgatgt |
189 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
25146265 |
agtttcttattataggttttgtataattagaataactgtttgccctaataagagagttgatgatgatgt |
25146333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University