View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3060-Insertion-32 (Length: 174)
Name: NF3060-Insertion-32
Description: NF3060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3060-Insertion-32 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 127; Significance: 7e-66; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 127; E-Value: 7e-66
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 40006423 - 40006255
Alignment:
| Q |
7 |
aagtactcgattggttttcttgaannnnnnnnnncgtatataccatatcatacatttgatttctttccaattaatcttaataatttagaataaatagcta |
106 |
Q |
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| T |
40006423 |
aagtactcgattggttttcttgaattttttttttcatatataccatatcatacatttgatttctttccaattaatcttaataatttagaataaatagcta |
40006324 |
T |
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| Q |
107 |
agctcgcagatgacaagac-ccccacaatcatcataggcatagttgttgtgggaaactccctcttgctg |
174 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40006323 |
agctcgcagatgacaagaccccccacaatcatcataggcatagttgttgtgggaaactccctcttgctg |
40006255 |
T |
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