View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3060-Insertion-33 (Length: 88)
Name: NF3060-Insertion-33
Description: NF3060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3060-Insertion-33 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 73; Significance: 6e-34; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 73; E-Value: 6e-34
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 42369692 - 42369771
Alignment:
| Q |
8 |
ataataatgaaatgaaattgattttgatatgatgaataatgcaatcttatgatatgttatgttatgatattagggacttta |
88 |
Q |
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| T |
42369692 |
ataataatgaaatgaaattgattt-gatatgatgaataatgcaatcttatgatatgttatgttatgatattagggacttta |
42369771 |
T |
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